Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Reverse (-)

27099504 .. 27104714

Gene Structure 5211 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g37150.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2844 bp

ATGATTAACAGACTTGCTCTTACTTCTTTCTCTGTCTTGTTTCTGTCTTTATGGATTTCCTTGGCCATTCCACAAAGCAAAACGATGCAAGTTCAGATTGGCGTTGTTCTTGATGACCTTAATTCAGTGAGAGGCAAGACTTTGCTGAGCTGTATCAAAATGGCTGTTTCAGACTTCTATGTTCATCATCCTTTCTACAAGACTAGGCTGGTCTTGAACACTAGGGACTCGAAGAAGAATGTTGTCGCTGCAGCTGCCTCAGCGTTCGAGCTGATAAAGAACGAAGAAGTGCGAGCCATAATTGGGCCAGTGACATCAATGGAGACAAGCTTTGTTATCAATCTTGGAGACCAAACTCATGTGCCAATCATATCATTTTCTGCAACAAGTCCTTCTCTTACTTCGCTCCGCAGCTCCTATTTTTTCCAATTTGCTCAGAATGACACATCCCAAGTGAAAGCTATAAGTGCGGTTATCAAAAGCTTCGGGTGGAGACTAGTTGTGCTCATGTACATAGACACTTTTTATGGGGAGGCAGTCACACCGTTTTTAACCGATGCCCTTCAAGAAGTGGGTGGTGCTGTCTCCTACCGGAGTGTCATTTCCCCCTCTGCAACCGAAGATCAAATTGCGAAAGAGCTTTACAAGTTGATGACCATGCAAACTAGAGTCTTCATTGTCCATATGACAACCGATCTATGCTCCAAGGTATTTGCCAAGGCAGAAGAGATTGGAATGATGGCTGAAGGCTATGTTTGGTTAACCACCAATGGGATCACTAATCGTTTAGCTTCAATGAATACTTCAGTCATCAATTCCATGAATGGAGTTATAGGTGTACAGACTTATGTCCAGAAAACAAGAAAGCTGGAAGAGTTCAAGCTCAGGTGGAAAAGGCAGTTCCAAAACGACTATCCAGACATCCTTGGTGCTGAATTGGATGTTTACGGATTGTGGGCTTATGATGCTACATTTGCCATAGCAATGGCAGTTGAACAAGTGATGGGAACTCCTACAAGTAGTTTTGGTTTCCAAAAGCCAAATGCCTCAAACGAGTCCACAGATATTCTTGGGAGGTTTCCCATTTCTCCATATGGTCCAAAACTTTGCAAAGCACTATCAGCTACTAGATTCCTAGGCATTGCAGGAGAAGTCATGCTCATTGATGGGCAGCTTCAATCATCCAATTTTCGGATAATTAATGTCAACGGCCATGGAGCAAGAACAATAGGATTTTGGAAACCGAAACATGGACTTGTGAGCAAAATGAGTTCCCCAAATACCACACGCCATCTTGGACCGGTTATATGGCCAGGAGAGTCTCTCTCTGTTCCCAAAGGGTGGGAGATCCCAACAAAGGGGAAAAAGTTGAGAATAGGAGTTCCTGTTAGGGATGGGTTTACTGAGCTAGTCAAGGTAACTACAGATCCGACCACCAACACTACTGATGTTACCGGATTCAGTATTGAAGTGTTCAAGGCCGTAGTTGACATGTTACCATATGCTCTTCGTTACGAGTTCATTCCCTTTGCAAAGCCTGATGGCACCAGCGCTGGCACTTACAATGACTTGTGCTATCAAGTATATCTTGGGAATTTTGATGCCGTGGTCGGAGATACAACAATTCGAGCAAACAGGTCACTGTATGTGGACTTTACAATGCCTTATGCAGAAGCCGGTGTCGTAATGGTTGTGCCGGTCATAGACACAAACAAAAGAAGTGCATGGGCTTTCTTCAAGCCATGGGGTTGGGACCTTTGGCTTGCAACTCTGATTTCCTTGTTGTTGATAGGTTTTGTGGTTTGGGTCGTTCAACATCGAACTAATGAAGATTTCCAAGGCATTACCGCACGTCAAGAAGTTGGCAATGTTATATGGTTCGCCTTCTCAACCATGGTTTTTGCTCAACGAGAGAGAGTGGATACCAACTTGGCTAGATTTGTTATGATAATATGGCTATTTGTCGTGCTAGTACTGACAATTAATTACCAAGCAAGTCTAACCTCAATATATACGGTTGAAAAACTCGAGCCAACTGTGACCGATATCAAGGATCTATTGAGGAAGGGGGAAACGATCGGCTACATACCAGCTGCTTATACTTACGAGATGTTGAAGCAAATAGGTTTTACAGATTCCAAGCTCATGGCTTTGGGAACTATTGAAGCAATTGATGATGCTCTTTCGAAAGGGAGTGCAAACAATGGCATTGCTGCTTTTGTTGATGAAACTCCCTACATGAAGCTTTTCCTTGCAAAATACTGCAACAAATATACTATGGTTGCGCCCATATTTAAAACCGATGGTCATGGCTTTGTATTTCCAAAACGCTCTCCTCTTCTACCCGATGTTTCGCAGGCAGTCCTAAATGTCACCGGAGGAGAAAAGATAATGAACATTGAAAACAGATGGTTCAAGAAAAACAGCAAGTGTCATGACTTGACCAACCCAAGAGTTTCTAGCAATAGACTTGATTTTGAAAGCTTCCGGGTCTTATTCTTCACAACTTTGGTGGCTTCAGGAGTGGCTCTGATCCTCTACATAGTTCGGTTCAGTTACAAGTATAGCGACGTTTGGAGATCTGAAACATCTACGCCTAGAAGGATTCAAGCCATGTTGAAAAAGTTTTATGAAATAGACCCTTCTAGAAGCAACCGGATGCCGGAAAGTTCACGACTGCTCGGCCAGGATTCGAACCGCACAGATACGAATTTTGTTTATTCTTCTGATTCTGAAGATGAAAGAGCACCCCCAACTGATCGAGCGTCTCCGGAAATAGCTACTGCATCTGCTGAGTCTCCTGGTGCAGTTCAAGATCGAAATGCAAACAACCACAACAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

948

Amino Acids

105.8

Weight (kDa)

8.7

Isoelectric Point (pI)

33.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	31 - 340	7.5e-21	Periplasmic binding protein
ANF_receptor	PF01094	50 - 404	6.1e-80	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	476 - 565	2.8e-06	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	480 - 806	2.4e-07	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	584 - 839	2.2e-31	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1544
AccB7I	CCANNNNNTGG	1 cut(s)	1341
AccIII	TCCGGA	1 cut(s)	2770
AciI	CCGC	4 cut(s)	409, 470, 1848, 2698
AclWI	GGATC	5 cut(s)	782, 1342, 1421, 2061, 2527
AcoI	YGGCCR	4 cut(s)	63, 1210, 1310, 2683
AcsI	RAATTY	2 cut(s)	1594, 2710
AcuI	CTGAAG	4 cut(s)	765, 789, 2502, 2754
AfaI	GTAC	3 cut(s)	512, 840, 1974
AfeI	AGCGCT	1 cut(s)	1552
AfiI	CCNNNNNNNGG	8 cut(s)	303, 771, 1191, 1250, 1341, 1357, 1358, 2662
AflIII	ACRYGT	1 cut(s)	1491
AgeI	ACCGGT	1 cut(s)	1300
AhlI	ACTAGT	1 cut(s)	496
AjiI	CACGTC	1 cut(s)	1853
AjnI	CCWGG	3 cut(s)	1312, 2685, 2800
Alw21I	GWGCWC	2 cut(s)	507, 2749
Alw26I	GTCTC	7 cut(s)	317, 342, 487, 589, 1326, 2772, 2802
AlwI	GGATC	5 cut(s)	782, 1342, 1421, 2061, 2527
Ama87I	CYCGRG	1 cut(s)	2027
Aor13HI	TCCGGA	1 cut(s)	2770
Aor51HI	AGCGCT	1 cut(s)	1552
AoxI	GGCC	6 cut(s)	63, 305, 1210, 1310, 1479, 2683
ApeKI	GCWGC	7 cut(s)	248, 251, 254, 411, 1171, 2093, 2213
ApoI	RAATTY	2 cut(s)	1594, 2710
AseI	ATTAAT	2 cut(s)	1200, 1983
AsiGI	ACCGGT	1 cut(s)	1300
Asp700I	GAANNNNTTC	1 cut(s)	2246
AspA2I	CCTAGG	1 cut(s)	1135
AspLEI	GCGC	2 cut(s)	1553, 2287
AspS9I	GGNCC	4 cut(s)	305, 1097, 1298, 1753
AsuC2I	CCSGG	1 cut(s)	2489
AsuHPI	GGTGA	1 cut(s)	2365
AsuII	TTCGAA	2 cut(s)	2186, 2693
AvaI	CYCGRG	1 cut(s)	2027
AvaII	GGWCC	3 cut(s)	1097, 1298, 1753
AvrII	CCTAGG	1 cut(s)	1135
BalI	TGGCCA	2 cut(s)	65, 1312
BanI	GGYRCC	1 cut(s)	1544
BbsI	GAAGAC	1 cut(s)	664
Bbv12I	GWGCWC	2 cut(s)	507, 2749
BbvCI	CCTCAGC	1 cut(s)	259
BbvI	GCAGC	7 cut(s)	235, 241, 263, 423, 1183, 2080, 2200
BccI	CCATC	8 cut(s)	733, 997, 1160, 1299, 1388, 1535, 2297, 2403
BceAI	ACGGC	3 cut(s)	1225, 1466, 1589
BciT130I	CCWGG	3 cut(s)	1314, 2687, 2802
BciVI	GTATCC	1 cut(s)	1915
BcnI	CCSGG	1 cut(s)	2489
BcoDI	GTCTC	7 cut(s)	317, 342, 487, 589, 1326, 2772, 2802
BcuI	ACTAGT	1 cut(s)	496
BfmI	CTRYAG	2 cut(s)	249, 1422
BfoI	RGCGCY	1 cut(s)	1554
BfuI	GTATCC	1 cut(s)	1915
BglII	AGATCT	1 cut(s)	2579
BisI	GCNGC	7 cut(s)	249, 252, 255, 412, 1172, 2094, 2214
BlnI	CCTAGG	1 cut(s)	1135
BlpI	GCTNAGC	1 cut(s)	146
BlsI	GCNGC	7 cut(s)	250, 253, 256, 413, 1173, 2095, 2215
BmcAI	AGTACT	1 cut(s)	1974
Bme1390I	CCNGG	4 cut(s)	1314, 2489, 2687, 2802
Bme18I	GGWCC	3 cut(s)	1097, 1298, 1753
BmeT110I	CYCGRG	1 cut(s)	2027
BmgBI	CACGTC	1 cut(s)	1853
BmgT120I	GGNCC	4 cut(s)	305, 1097, 1298, 1753
BmiI	GGNNCC	2 cut(s)	1546, 1754
BmrFI	CCNGG	4 cut(s)	1314, 2489, 2687, 2802
BmsI	GCATC	7 cut(s)	75, 547, 955, 1591, 2167, 2649, 2795
BoxI	GACNNNNGTC	1 cut(s)	848
BpiI	GAAGAC	1 cut(s)	664
BplI	GAGNNNNNCTC	4 cut(s)	1308, 1340, 1310, 1342
Bpu10I	CCTNAGC	2 cut(s)	259, 884
Bpu1102I	GCTNAGC	1 cut(s)	146
Bpu14I	TTCGAA	2 cut(s)	2186, 2693
BpuMI	CCSGG	1 cut(s)	2489
BsaI	GGTCTC	1 cut(s)	342
BsaWI	WCCGGW	6 cut(s)	591, 1300, 1454, 2375, 2655, 2770
BsaXI	ACNNNNNCTCC	2 cut(s)	1371, 1401
Bsc4I	CCNNNNNNNGG	8 cut(s)	303, 771, 1191, 1250, 1341, 1357, 1358, 2662
Bse118I	RCCGGY	3 cut(s)	1300, 1676, 1696
Bse1I	ACTGG	1 cut(s)	308
Bse3DI	GCAATG	4 cut(s)	990, 1140, 1873, 2208
BseAI	TCCGGA	1 cut(s)	2770
BseBI	CCWGG	3 cut(s)	1314, 2687, 2802
BseGI	GGATG	7 cut(s)	187, 446, 921, 946, 1181, 1399, 2664
BseLI	CCNNNNNNNGG	8 cut(s)	303, 771, 1191, 1250, 1341, 1357, 1358, 2662
BseMI	GCAATG	4 cut(s)	990, 1140, 1873, 2208
BseMII	CTCAG	6 cut(s)	137, 273, 449, 898, 1395, 2784
BseNI	ACTGG	1 cut(s)	308
BseRI	GAGGAG	2 cut(s)	2325, 2394
BseXI	GCAGC	7 cut(s)	235, 241, 263, 423, 1183, 2080, 2200
BsgI	GTGCAG	1 cut(s)	2826
Bsh1285I	CGRYCG	1 cut(s)	2079
BshFI	GGCC	6 cut(s)	65, 307, 1212, 1312, 1481, 2685
BshNI	GGYRCC	1 cut(s)	1544
BshTI	ACCGGT	1 cut(s)	1300
BsiEI	CGRYCG	1 cut(s)	2079
BsiHKAI	GWGCWC	2 cut(s)	507, 2749
BsiHKCI	CYCGRG	1 cut(s)	2027
BslFI	GGGAC	2 cut(s)	239, 1766
BslI	CCNNNNNNNGG	8 cut(s)	303, 771, 1191, 1250, 1341, 1357, 1358, 2662
BsmAI	GTCTC	7 cut(s)	317, 342, 487, 589, 1326, 2772, 2802
BsmBI	CGTCTC	1 cut(s)	2772
BsmFI	GGGAC	2 cut(s)	239, 1766
BsnI	GGCC	6 cut(s)	65, 307, 1212, 1312, 1481, 2685
Bso31I	GGTCTC	1 cut(s)	342
BsoBI	CYCGRG	1 cut(s)	2027
Bsp119I	TTCGAA	2 cut(s)	2186, 2693
Bsp1286I	GDGCHC	2 cut(s)	507, 2749
Bsp13I	TCCGGA	1 cut(s)	2770
Bsp1407I	TGTACA	2 cut(s)	510, 838
Bsp1720I	GCTNAGC	1 cut(s)	146
Bsp19I	CCATGG	3 cut(s)	1213, 1742, 1893
BspACI	CCGC	4 cut(s)	409, 470, 1848, 2698
BspANI	GGCC	6 cut(s)	65, 307, 1212, 1312, 1481, 2685
BspCNI	CTCAG	6 cut(s)	138, 272, 448, 897, 1396, 2785
BspEI	TCCGGA	1 cut(s)	2770
BspHI	TCATGA	1 cut(s)	2434
BspLI	GGNNCC	2 cut(s)	1546, 1754
BspMAI	CTGCAG	1 cut(s)	253
BspPI	GGATC	5 cut(s)	782, 1342, 1421, 2061, 2527
BspQI	GCTCTTC	1 cut(s)	1512
BspT104I	TTCGAA	2 cut(s)	2186, 2693
BspT107I	GGYRCC	1 cut(s)	1544
BspTNI	GGTCTC	1 cut(s)	342
BsrDI	GCAATG	4 cut(s)	990, 1140, 1873, 2208
BsrFI	RCCGGY	3 cut(s)	1300, 1676, 1696
BsrGI	TGTACA	2 cut(s)	510, 838
BsrI	ACTGG	1 cut(s)	308
BssAI	RCCGGY	3 cut(s)	1300, 1676, 1696
BssT1I	CCWWGG	9 cut(s)	60, 705, 717, 925, 1135, 1213, 1742, 1837, 1893
Bst2UI	CCWGG	3 cut(s)	1314, 2687, 2802
Bst4CI	ACNGT	4 cut(s)	546, 1644, 2017, 2038
Bst6I	CTCTTC	4 cut(s)	720, 867, 1512, 2343
BstAUI	TGTACA	2 cut(s)	510, 838
BstBI	TTCGAA	2 cut(s)	2186, 2693
BstC8I	GCNNGC	4 cut(s)	294, 1555, 1764, 2358
BstDEI	CTNAG	6 cut(s)	146, 259, 435, 884, 1404, 2793
BstDSI	CCRYGG	4 cut(s)	1213, 1605, 1742, 1893
BstF5I	GGATG	7 cut(s)	187, 446, 921, 946, 1181, 1399, 2664
BstH2I	RGCGCY	1 cut(s)	1554
BstHHI	GCGC	2 cut(s)	1553, 2287
BstMAI	GTCTC	7 cut(s)	317, 342, 487, 589, 1326, 2772, 2802
BstMCI	CGRYCG	1 cut(s)	2079
BstMWI	GCNNNNNNNGC	6 cut(s)	254, 260, 467, 965, 974, 1121
BstNI	CCWGG	3 cut(s)	1314, 2687, 2802
BstNSI	RCATGY	1 cut(s)	1495
BstPAI	GACNNNNGTC	1 cut(s)	848
BstSCI	CCNGG	4 cut(s)	1312, 2487, 2685, 2800
BstSFI	CTRYAG	2 cut(s)	249, 1422
BstV1I	GCAGC	7 cut(s)	235, 241, 263, 423, 1183, 2080, 2200
BstV2I	GAAGAC	1 cut(s)	664
BstX2I	RGATCY	4 cut(s)	1347, 1426, 2053, 2579
BstXI	CCANNNNNNTGG	3 cut(s)	985, 1749, 2146
BstYI	RGATCY	4 cut(s)	1347, 1426, 2053, 2579
BsuI	GTATCC	1 cut(s)	1915
BsuRI	GGCC	6 cut(s)	65, 307, 1212, 1312, 1481, 2685
BtgI	CCRYGG	4 cut(s)	1213, 1605, 1742, 1893
BtrI	CACGTC	1 cut(s)	1853
BtsCI	GGATG	7 cut(s)	187, 446, 921, 946, 1181, 1399, 2664
BtsIMutI	CAGTG	3 cut(s)	132, 315, 1640
Cac8I	GCNNGC	4 cut(s)	294, 1555, 1764, 2358
CciI	TCATGA	1 cut(s)	2434
CfoI	GCGC	2 cut(s)	1553, 2287
Cfr10I	RCCGGY	3 cut(s)	1300, 1676, 1696
Cfr13I	GGNCC	4 cut(s)	305, 1097, 1298, 1753
CseI	GACGC	1 cut(s)	2754
Csp6I	GTAC	3 cut(s)	511, 839, 1973
CspAI	ACCGGT	1 cut(s)	1300
CspCI	CAANNNNNGTGG	2 cut(s)	2493, 2528
CviQI	GTAC	3 cut(s)	511, 839, 1973
DdeI	CTNAG	6 cut(s)	146, 259, 435, 884, 1404, 2793
DraI	TTTAAA	1 cut(s)	2296
EaeI	YGGCCR	4 cut(s)	63, 1210, 1310, 2683
Eam1104I	CTCTTC	4 cut(s)	720, 867, 1512, 2343
EarI	CTCTTC	4 cut(s)	720, 867, 1512, 2343
Eco130I	CCWWGG	9 cut(s)	60, 705, 717, 925, 1135, 1213, 1742, 1837, 1893
Eco31I	GGTCTC	1 cut(s)	342
Eco32I	GATATC	1 cut(s)	2047
Eco47I	GGWCC	3 cut(s)	1097, 1298, 1753
Eco47III	AGCGCT	1 cut(s)	1552
Eco57I	CTGAAG	4 cut(s)	765, 789, 2502, 2754
Eco88I	CYCGRG	1 cut(s)	2027
EcoO109I	RGGNCCY	1 cut(s)	1753
EcoRII	CCWGG	3 cut(s)	1312, 2685, 2800
EcoRV	GATATC	1 cut(s)	2047
EcoT14I	CCWWGG	9 cut(s)	60, 705, 717, 925, 1135, 1213, 1742, 1837, 1893
ErhI	CCWWGG	9 cut(s)	60, 705, 717, 925, 1135, 1213, 1742, 1837, 1893
Esp3I	CGTCTC	1 cut(s)	2772
FalI	AAGNNNNNCTT	2 cut(s)	1572, 1604
FaqI	GGGAC	2 cut(s)	239, 1766
FauNDI	CATATG	3 cut(s)	684, 1093, 1501
Fnu4HI	GCNGC	7 cut(s)	249, 252, 255, 412, 1172, 2094, 2214
FokI	GGATG	7 cut(s)	174, 433, 908, 953, 1168, 1406, 2671
Fsp4HI	GCNGC	7 cut(s)	249, 252, 255, 412, 1172, 2094, 2214
GlaI	GCGC	2 cut(s)	1552, 2286
GluI	GCNGC	7 cut(s)	249, 252, 255, 412, 1172, 2094, 2214
HaeII	RGCGCY	1 cut(s)	1554
HaeIII	GGCC	6 cut(s)	65, 307, 1212, 1312, 1481, 2685
HgaI	GACGC	1 cut(s)	2754
HhaI	GCGC	2 cut(s)	1553, 2287
Hin6I	GCGC	2 cut(s)	1551, 2285
HinP1I	GCGC	2 cut(s)	1551, 2285
HincII	GTYRAC	3 cut(s)	762, 1207, 1489
HindII	GTYRAC	3 cut(s)	762, 1207, 1489
HindIII	AAGCTT	4 cut(s)	328, 481, 2243, 2482
HpaI	GTTAAC	1 cut(s)	762
HphI	GGTGA	1 cut(s)	2365
Hpy166II	GTNNAC	9 cut(s)	762, 839, 946, 1059, 1207, 1401, 1489, 1651, 2672
Hpy8I	GTNNAC	9 cut(s)	762, 839, 946, 1059, 1207, 1401, 1489, 1651, 2672
Hpy99I	CGWCG	1 cut(s)	2573
HpyAV	CCTTC	7 cut(s)	402, 572, 740, 1894, 2059, 2595, 2652
HpyCH4III	ACNGT	4 cut(s)	546, 1644, 2017, 2038
HpyCH4IV	ACGT	2 cut(s)	1852, 2571
HpyF10VI	GCNNNNNNNGC	6 cut(s)	254, 260, 467, 965, 974, 1121
HpyF3I	CTNAG	6 cut(s)	146, 259, 435, 884, 1404, 2793
HpySE526I	ACGT	2 cut(s)	1852, 2571
HspAI	GCGC	2 cut(s)	1551, 2285
Kpn2I	TCCGGA	1 cut(s)	2770
KspAI	GTTAAC	1 cut(s)	762
LguI	GCTCTTC	1 cut(s)	1512
LmnI	GCTCC	4 cut(s)	411, 419, 707, 1217
Lsp1109I	GCAGC	7 cut(s)	235, 241, 263, 423, 1183, 2080, 2200
LweI	GCATC	7 cut(s)	75, 547, 955, 1591, 2167, 2649, 2795
MaeII	ACGT	2 cut(s)	1852, 2571
MfeI	CAATTG	1 cut(s)	2169
MflI	RGATCY	4 cut(s)	1347, 1426, 2053, 2579
MhlI	GDGCHC	2 cut(s)	507, 2749
MlsI	TGGCCA	2 cut(s)	65, 1312
MluNI	TGGCCA	2 cut(s)	65, 1312
MlyI	GAGTC	5 cut(s)	221, 678, 1064, 1328, 2804
MmeI	TCCRAC	2 cut(s)	1454, 1591
Mox20I	TGGCCA	2 cut(s)	65, 1312
MroI	TCCGGA	1 cut(s)	2770
MroXI	GAANNNNTTC	1 cut(s)	2246
MscI	TGGCCA	2 cut(s)	65, 1312
MseI	TTAA	7 cut(s)	6, 120, 551, 761, 1200, 1983, 2295
MslI	CAYNNNNRTG	1 cut(s)	983
Msp20I	TGGCCA	2 cut(s)	65, 1312
MspA1I	CMGCKG	3 cut(s)	254, 2093, 2841
MspR9I	CCNGG	4 cut(s)	1314, 2489, 2687, 2802
MunI	CAATTG	1 cut(s)	2169
MvaI	CCWGG	3 cut(s)	1314, 2687, 2802
MwoI	GCNNNNNNNGC	6 cut(s)	254, 260, 467, 965, 974, 1121
NciI	CCSGG	1 cut(s)	2489
NcoI	CCATGG	3 cut(s)	1213, 1742, 1893
NdeI	CATATG	3 cut(s)	684, 1093, 1501
NlaIV	GGNNCC	2 cut(s)	1546, 1754
NmeAIII	GCCGAG	1 cut(s)	2661
NmuCI	GTSAC	5 cut(s)	310, 538, 1638, 2038, 2371
NspI	RCATGY	1 cut(s)	1495
NspV	TTCGAA	2 cut(s)	2186, 2693
PaeR7I	CTCGAG	1 cut(s)	2027
PagI	TCATGA	1 cut(s)	2434
PciI	ACATGT	1 cut(s)	1491
PciSI	GCTCTTC	1 cut(s)	1512
PdmI	GAANNNNTTC	1 cut(s)	2246
PfeI	GAWTC	6 cut(s)	1131, 1458, 2135, 2605, 2690, 2729
PflMI	CCANNNNNTGG	1 cut(s)	1341
PinAI	ACCGGT	1 cut(s)	1300
PkrI	GCNGC	7 cut(s)	250, 253, 256, 413, 1173, 2095, 2215
Ple19I	CGATCG	1 cut(s)	2079
PleI	GAGTC	5 cut(s)	221, 677, 1063, 1327, 2803
PpsI	GAGTC	5 cut(s)	221, 677, 1063, 1327, 2803
PpuMI	RGGWCCY	1 cut(s)	1753
PscI	ACATGT	1 cut(s)	1491
PshAI	GACNNNNGTC	1 cut(s)	848
PshBI	ATTAAT	2 cut(s)	1200, 1983
Psp5II	RGGWCCY	1 cut(s)	1753
Psp6I	CCWGG	3 cut(s)	1312, 2685, 2800
PspGI	CCWGG	3 cut(s)	1312, 2685, 2800
PspN4I	GGNNCC	2 cut(s)	1546, 1754
PspPI	GGNCC	4 cut(s)	305, 1097, 1298, 1753
PspPPI	RGGWCCY	1 cut(s)	1753
PspXI	VCTCGAGB	1 cut(s)	2027
PstI	CTGCAG	1 cut(s)	253
PsuI	RGATCY	4 cut(s)	1347, 1426, 2053, 2579
PvuI	CGATCG	1 cut(s)	2079
PvuII	CAGCTG	3 cut(s)	254, 2093, 2841
RsaI	GTAC	3 cut(s)	512, 840, 1974
RsaNI	GTAC	3 cut(s)	511, 839, 1973
RseI	CAYNNNNRTG	1 cut(s)	983
SapI	GCTCTTC	1 cut(s)	1512
SaqAI	TTAA	7 cut(s)	6, 120, 551, 761, 1200, 1983, 2295
SatI	GCNGC	7 cut(s)	249, 252, 255, 412, 1172, 2094, 2214
Sau96I	GGNCC	4 cut(s)	305, 1097, 1298, 1753
ScaI	AGTACT	1 cut(s)	1974
SchI	GAGTC	5 cut(s)	221, 678, 1064, 1328, 2804
ScrFI	CCNGG	4 cut(s)	1314, 2489, 2687, 2802
SduI	GDGCHC	2 cut(s)	507, 2749
SfaNI	GCATC	7 cut(s)	75, 547, 955, 1591, 2167, 2649, 2795
SfcI	CTRYAG	2 cut(s)	249, 1422
Sfr274I	CTCGAG	1 cut(s)	2027
SfuI	TTCGAA	2 cut(s)	2186, 2693
SinI	GGWCC	3 cut(s)	1097, 1298, 1753
SlaI	CTCGAG	1 cut(s)	2027
SmiMI	CAYNNNNRTG	1 cut(s)	983
SmlI	CTYRAG	1 cut(s)	2027
SmoI	CTYRAG	1 cut(s)	2027
SpeI	ACTAGT	1 cut(s)	496
SsiI	CCGC	4 cut(s)	409, 470, 1848, 2698
StyD4I	CCNGG	4 cut(s)	1312, 2487, 2685, 2800
StyI	CCWWGG	9 cut(s)	60, 705, 717, 925, 1135, 1213, 1742, 1837, 1893
TaaI	ACNGT	4 cut(s)	546, 1644, 2017, 2038
TaiI	ACGT	2 cut(s)	1855, 2574
TaqI	TCGA	9 cut(s)	230, 267, 1627, 1819, 2028, 2186, 2693, 2761, 2818
TaqII	GACCGA	1 cut(s)	2057
TatI	WGTACW	3 cut(s)	510, 838, 1972
TfiI	GAWTC	6 cut(s)	1131, 1458, 2135, 2605, 2690, 2729
Tru1I	TTAA	7 cut(s)	6, 120, 551, 761, 1200, 1983, 2295
Tru9I	TTAA	7 cut(s)	6, 120, 551, 761, 1200, 1983, 2295
TscAI	CASTG	3 cut(s)	132, 315, 1647
TseFI	GTSAC	5 cut(s)	310, 538, 1638, 2038, 2371
TseI	GCWGC	7 cut(s)	248, 251, 254, 411, 1171, 2093, 2213
Tsp45I	GTSAC	5 cut(s)	310, 538, 1638, 2038, 2371
TspGWI	ACGGA	1 cut(s)	963
TspRI	CASTG	3 cut(s)	132, 315, 1647
Van91I	CCANNNNNTGG	1 cut(s)	1341
VpaK11BI	GGWCC	3 cut(s)	1097, 1298, 1753
VspI	ATTAAT	2 cut(s)	1200, 1983
XapI	RAATTY	2 cut(s)	1594, 2710
XbaI	TCTAGA	1 cut(s)	2645
XceI	RCATGY	1 cut(s)	1495
XhoI	CTCGAG	1 cut(s)	2027
XmaJI	CCTAGG	1 cut(s)	1135
XmnI	GAANNNNTTC	1 cut(s)	2246
ZrmI	AGTACT	1 cut(s)	1974

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.