Rh7BG060000

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
4016931 .. 4020459
3529 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG060000.1

Sequence Viewer

Length: 2082 bp
ATGGGGATGAGCTGCATCGACATGGCCCTATTGGACTGGTATGCTTCACATCCGAATTACAATACGAGGCTCCTTCTGCACCAAAGGAACTCCCCCTCTGATGTTGTTCTTTCAGCTGCTGCAGCTCTTGACCTGATAAAGAATGTTGAAGTGCAAGCCATCGTAGGCCCTGCGTCATCAATGCAGGCCAACTTCATGATCAATCTAGGAGACAAAGCACATGTCCCCATAATCTCATTTTCAGCAACAAGCCCTTCTCTAACTTCAATTCGGAGCCCATATTTCTTTCGAGCTGCACAAAATGACTCGTCTCAGGTGAAAGTCATAAGCGATATCATTCAAGCATTTGGTTGGAGACAAGTAGTCCCCATGTACGTCGACAATGAGTTTGGAGAAGGAGTAATCCCTTACCTCTCCGACGCTCTACAAGAGATTGATGTTCGAATCCCTTATCGGAGTGTTATTTCCCCAACTGCCACCGATGACCAAATTGAAGCTGAGCTATATAAGTTGGTGACAATGCAAACAAGGGTCTTCATTGTCCACATGTTACCTTCATTAGGTTCTCGAATTTTTGAGAAAGCAAAAGAGATTGGGATGATGGATAAAGGTTATGTTTGGATAGTGACCAATGGAATTTCTAACGTGTTTGGTTCGTTTAATTCATCTTTTGTCACGGAAAACATGCAAGGGGTGTTGGGTTTAAAAACCCATGTCCCAAATAAGAAAAAGCTTGAGGCTTTCAGAGTAAGATGGAAAAAGAAATTTCGACAAGACAATCCAACTGCCATTAATGTGAATTTGGATGTGTTTGGATTGTGGGCTTATGATGCTGCCAAGGCACTAGCCATAGCAGTGGAGAAGGTTGGGAGTACTAAAACCTTCACCTACCAAAAGATGAATGTTTCTGAAGTCTTTGAAGCTGTAAGAAAAGCATTGCCTTATGATATCTCTTATGAGTTCTATGCTTATGCAAAGCCTGATGGTGAAACTGCTGGTAGTTACAATGATTTGGTCAACCAAGTGTTTTTAGGGAACTATGATGCTGCGGTGGGAGATATAACCATAAGAGCAAACAGGTCCTTGTATGTGGACTTCACATTGCCATACACAGAATCTGGGGTATCCATGATCGTGCCTATTGAAGACAATAAAAGGGAGCGAGTGGTTAGCAACTTGGCTAGGTTCGTAGTGGTCATATGGGGCGTGGTAGTGCTCATATTGACCCAGAGCTACACTGCTAGTTTAACATCAATGTTAACAGTTCAGCAGCTCCAACCAACTGTTAGTGATGTAAACTTTCTCCTGAAAAATGGAGACAATGTTGGTTATCAGGAAGGTTCTTTTGTTTACGGCATTTTGAGGCAACTAGGTTTTCGGGATGAGAAGCTTCAGACCTATAATTCCACAGAAGACTTGCATCGACTTTTTCAAATTGGGAGTACAAACGGTGGTATAAGTGCTGCTTTTGATGAAACCCCATACTTCAAGGTTTTTATTGCAAGTTATTGGTCGAAATACACAATGCTTGATCCAACATTTAAAGCCGATGGTTTCGCCTTTGTCTTCCCAAAAGATTCACCTCTGGCTCGCGATGTTTCGAGGGCAATCTTGAATGTGAATGAGGGAGGCCAGGCGAAAAAGATCGAAGACAGATGGTTCAATAGACACTCGAGTTGTCCAGACCCAAATAGCAAGGTCTCTTCCAACAGTCTTAGCCTTGAAAGCTTCTGGGGTCTCTTCCTCATTGCTGGAGTAGCTTCAGTACTAGCTCTACTCATATTTGCGGGCACATTCTTGTATGAACACAAGGACATGTTAATCTGCTCTGATTCAGAGGATTCATCGTGGAAAAAACTTTGTGACATATTAAAACAATACGACCTAAAAGACCAGAAGAGCCATACTTTTAGGCGTGAAGATCAGAGCCAAATTGGAGCAGAGAGTGTTTCTGTTGAGCAGAGTCCCCAGAGCACACCTCGTACTGATCATGGTCAGTCACCTAGAGAGACTGAACCTCAACAATTCGGAGAGATTGAACCGGCTATTGAGCTTGCTCAGGGACCAAGAGGAAATCAGTAG

Protein Analysis

693

Amino Acids

77.51

Weight (kDa)

5.56

Isoelectric Point (pI)

41.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 5 - 296 5.9e-73 Receptor family ligand binding region
Peripla_BP_6 PF13458 33 - 293 1.7e-16 Periplasmic binding protein
Lig_chan-Glu_bd PF10613 330 - 380 3.3e-07 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 335 - 555 1.7e-09 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 385 - 587 1.1e-20 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 378
AccII CGCG 1 cut(s) 1593
AciI CCGC 2 cut(s) 1049, 1787
AclWI GGATC 1 cut(s) 1526
AcsI RAATTY 4 cut(s) 570, 636, 764, 799
AcuI CTGAAG 3 cut(s) 930, 1376, 1746
AfaI GTAC 5 cut(s) 374, 874, 1444, 1767, 1984
AfiI CCNNNNNNNGG 1 cut(s) 560
AflIII ACRYGT 4 cut(s) 220, 546, 645, 1815
AhdI GACNNNNNGTC 1 cut(s) 362
AjnI CCWGG 1 cut(s) 1632
Alw21I GWGCWC 2 cut(s) 1218, 1976
Alw26I GTCTC 7 cut(s) 204, 315, 349, 1311, 1705, 1742, 2003
AlwI GGATC 1 cut(s) 1526
AlwNI CAGNNNCTG 2 cut(s) 119, 1118
Ama87I CYCGRG 1 cut(s) 1672
AoxI GGCC 4 cut(s) 24, 166, 186, 1630
ApeKI GCWGC 9 cut(s) 12, 116, 119, 122, 293, 833, 1046, 1270, 1463
ApoI RAATTY 4 cut(s) 570, 636, 764, 799
ArsI GACNNNNNNTTYG 4 cut(s) 207, 239, 371, 403
AseI ATTAAT 1 cut(s) 792
AspS9I GGNCC 4 cut(s) 25, 167, 1080, 2063
AsuHPI GGTGA 6 cut(s) 328, 526, 877, 998, 1572, 1992
AsuII TTCGAA 1 cut(s) 442
AvaI CYCGRG 1 cut(s) 1672
AvaII GGWCC 2 cut(s) 1080, 2063
BaeGI GKGCMC 1 cut(s) 1793
BanII GRGCYC 1 cut(s) 278
BarI GAAGNNNNNNTAC 2 cut(s) 1079, 1111
BbsI GAAGAC 5 cut(s) 526, 1152, 1419, 1558, 1656
Bbv12I GWGCWC 2 cut(s) 1218, 1976
BbvI GCAGC 8 cut(s) 103, 106, 134, 280, 820, 1033, 1282, 1450
BccI CCATC 6 cut(s) 167, 595, 747, 977, 1544, 1650
BceAI ACGGC 1 cut(s) 1369
BciT130I CCWGG 1 cut(s) 1634
BciVI GTATCC 1 cut(s) 1135
BclI TGATCA 2 cut(s) 198, 1987
BcoDI GTCTC 7 cut(s) 204, 315, 349, 1311, 1705, 1742, 2003
BfaI CTAG 7 cut(s) 206, 845, 1182, 1242, 1370, 1769, 2004
BfmI CTRYAG 1 cut(s) 120
BfuI GTATCC 1 cut(s) 1135
BisI GCNGC 9 cut(s) 13, 117, 120, 123, 294, 834, 1047, 1271, 1464
BlpI GCTNAGC 1 cut(s) 498
BlsI GCNGC 9 cut(s) 14, 118, 121, 124, 295, 835, 1048, 1272, 1465
BmcAI AGTACT 2 cut(s) 874, 1767
Bme1390I CCNGG 1 cut(s) 1634
Bme18I GGWCC 2 cut(s) 1080, 2063
BmeRI GACNNNNNGTC 1 cut(s) 362
BmeT110I CYCGRG 1 cut(s) 1672
BmgT120I GGNCC 4 cut(s) 25, 167, 1080, 2063
BmiI GGNNCC 3 cut(s) 71, 275, 2064
BmrFI CCNGG 1 cut(s) 1634
BmsI GCATC 4 cut(s) 24, 820, 1033, 1429
BpiI GAAGAC 5 cut(s) 526, 1152, 1419, 1558, 1656
BplI GAGNNNNNCTC 2 cut(s) 1963, 1995
BpmI CTGGAG 1 cut(s) 1773
Bpu10I CCTNAGC 1 cut(s) 2058
Bpu1102I GCTNAGC 1 cut(s) 498
Bpu14I TTCGAA 1 cut(s) 442
BpuEI CTTGAG 1 cut(s) 755
BsaI GGTCTC 2 cut(s) 1705, 1742
BsaJI CCNNGG 1 cut(s) 837
BsaXI ACNNNNNCTCC 4 cut(s) 384, 414, 1308, 1338
Bsc4I CCNNNNNNNGG 1 cut(s) 560
Bse118I RCCGGY 1 cut(s) 2041
Bse1I ACTGG 1 cut(s) 41
Bse3DI GCAATG 3 cut(s) 935, 1100, 1746
BseBI CCWGG 1 cut(s) 1634
BseDI CCNNGG 1 cut(s) 837
BseGI GGATG 5 cut(s) 12, 49, 603, 811, 1387
BseLI CCNNNNNNNGG 1 cut(s) 560
BseMI GCAATG 3 cut(s) 935, 1100, 1746
BseMII CTCAG 3 cut(s) 326, 489, 2072
BseNI ACTGG 1 cut(s) 41
BseSI GKGCMC 1 cut(s) 1793
BseXI GCAGC 8 cut(s) 103, 106, 134, 280, 820, 1033, 1282, 1450
BsgI GTGCAG 2 cut(s) 62, 279
Bsh1236I CGCG 1 cut(s) 1593
BshFI GGCC 4 cut(s) 26, 168, 188, 1632
BsiHKAI GWGCWC 2 cut(s) 1218, 1976
BsiHKCI CYCGRG 1 cut(s) 1672
BsiSI CCGG 1 cut(s) 2042
BslFI GGGAC 5 cut(s) 209, 350, 701, 1950, 2076
BslI CCNNNNNNNGG 1 cut(s) 560
BsmAI GTCTC 7 cut(s) 204, 315, 349, 1311, 1705, 1742, 2003
BsmBI CGTCTC 1 cut(s) 315
BsmFI GGGAC 5 cut(s) 209, 350, 701, 1950, 2076
BsnI GGCC 4 cut(s) 26, 168, 188, 1632
Bso31I GGTCTC 2 cut(s) 1705, 1742
BsoBI CYCGRG 1 cut(s) 1672
Bsp119I TTCGAA 1 cut(s) 442
Bsp1286I GDGCHC 4 cut(s) 278, 1218, 1793, 1976
Bsp143I GATC 6 cut(s) 198, 1131, 1531, 1644, 1921, 1987
Bsp1720I GCTNAGC 1 cut(s) 498
Bsp68I TCGCGA 1 cut(s) 1593
BspACI CCGC 2 cut(s) 1049, 1787
BspANI GGCC 4 cut(s) 26, 168, 188, 1632
BspCNI CTCAG 3 cut(s) 325, 490, 2071
BspFNI CGCG 1 cut(s) 1593
BspHI TCATGA 1 cut(s) 195
BspLI GGNNCC 3 cut(s) 71, 275, 2064
BspMAI CTGCAG 1 cut(s) 124
BspPI GGATC 1 cut(s) 1526
BspQI GCTCTTC 1 cut(s) 1892
BspT104I TTCGAA 1 cut(s) 442
BspTNI GGTCTC 2 cut(s) 1705, 1742
BsrDI GCAATG 3 cut(s) 935, 1100, 1746
BsrFI RCCGGY 1 cut(s) 2041
BsrI ACTGG 1 cut(s) 41
BssAI RCCGGY 1 cut(s) 2041
BssECI CCNNGG 1 cut(s) 837
BssMI GATC 6 cut(s) 198, 1131, 1531, 1644, 1921, 1987
BssT1I CCWWGG 1 cut(s) 837
Bst2UI CCWGG 1 cut(s) 1634
Bst4CI ACNGT 4 cut(s) 1264, 1285, 1451, 1712
Bst6I CTCTTC 3 cut(s) 1708, 1745, 1892
BstBI TTCGAA 1 cut(s) 442
BstC8I GCNNGC 5 cut(s) 156, 186, 1591, 1789, 2055
BstDEI CTNAG 4 cut(s) 312, 498, 1715, 2058
BstENI CCTNNNNNAGG 1 cut(s) 558
BstF5I GGATG 5 cut(s) 12, 49, 603, 811, 1387
BstFNI CGCG 1 cut(s) 1593
BstKTI GATC 6 cut(s) 201, 1134, 1534, 1647, 1924, 1990
BstMAI GTCTC 7 cut(s) 204, 315, 349, 1311, 1705, 1742, 2003
BstMBI GATC 6 cut(s) 198, 1131, 1531, 1644, 1921, 1987
BstMWI GCNNNNNNNGC 6 cut(s) 76, 122, 830, 839, 1725, 1757
BstNI CCWGG 1 cut(s) 1634
BstNSI RCATGY 4 cut(s) 224, 550, 688, 1819
BstSCI CCNGG 1 cut(s) 1632
BstSFI CTRYAG 1 cut(s) 120
BstSLI GKGCMC 1 cut(s) 1793
BstUI CGCG 1 cut(s) 1593
BstV1I GCAGC 8 cut(s) 103, 106, 134, 280, 820, 1033, 1282, 1450
BstV2I GAAGAC 5 cut(s) 526, 1152, 1419, 1558, 1656
BstXI CCANNNNNNTGG 1 cut(s) 856
BsuI GTATCC 1 cut(s) 1135
BsuRI GGCC 4 cut(s) 26, 168, 188, 1632
BtgZI GCGATG 1 cut(s) 1608
BtsCI GGATG 5 cut(s) 12, 49, 603, 811, 1387
BtsI GCAGTG 2 cut(s) 861, 1236
BtsIMutI CAGTG 2 cut(s) 861, 1236
BtuMI TCGCGA 1 cut(s) 1593
Cac8I GCNNGC 5 cut(s) 156, 186, 1591, 1789, 2055
CaiI CAGNNNCTG 2 cut(s) 119, 1118
CciI TCATGA 1 cut(s) 195
Cfr10I RCCGGY 1 cut(s) 2041
Cfr13I GGNCC 4 cut(s) 25, 167, 1080, 2063
CseI GACGC 2 cut(s) 162, 428
Csp6I GTAC 5 cut(s) 373, 873, 1443, 1766, 1983
CviQI GTAC 5 cut(s) 373, 873, 1443, 1766, 1983
DdeI CTNAG 4 cut(s) 312, 498, 1715, 2058
DpnI GATC 6 cut(s) 200, 1133, 1533, 1646, 1923, 1989
DpnII GATC 6 cut(s) 198, 1131, 1531, 1644, 1921, 1987
DraI TTTAAA 2 cut(s) 705, 1543
DriI GACNNNNNGTC 1 cut(s) 362
Eam1104I CTCTTC 3 cut(s) 1708, 1745, 1892
Eam1105I GACNNNNNGTC 1 cut(s) 362
EarI CTCTTC 3 cut(s) 1708, 1745, 1892
Eco130I CCWWGG 1 cut(s) 837
Eco24I GRGCYC 1 cut(s) 278
Eco31I GGTCTC 2 cut(s) 1705, 1742
Eco32I GATATC 2 cut(s) 334, 949
Eco47I GGWCC 2 cut(s) 1080, 2063
Eco57I CTGAAG 3 cut(s) 930, 1376, 1746
Eco88I CYCGRG 1 cut(s) 1672
EcoNI CCTNNNNNAGG 1 cut(s) 558
EcoO109I RGGNCCY 2 cut(s) 167, 1080
EcoRII CCWGG 1 cut(s) 1632
EcoRV GATATC 2 cut(s) 334, 949
EcoT14I CCWWGG 1 cut(s) 837
EcoT38I GRGCYC 1 cut(s) 278
ErhI CCWWGG 1 cut(s) 837
Esp3I CGTCTC 1 cut(s) 315
FalI AAGNNNNNCTT 2 cut(s) 1450, 1482
FaqI GGGAC 5 cut(s) 209, 350, 701, 1950, 2076
FauI CCCGC 1 cut(s) 1780
FauNDI CATATG 1 cut(s) 1199
FbaI TGATCA 2 cut(s) 198, 1987
FblI GTMKAC 1 cut(s) 378
Fnu4HI GCNGC 9 cut(s) 13, 117, 120, 123, 294, 834, 1047, 1271, 1464
FokI GGATG 5 cut(s) 19, 36, 610, 818, 1394
FriOI GRGCYC 1 cut(s) 278
Fsp4HI GCNGC 9 cut(s) 13, 117, 120, 123, 294, 834, 1047, 1271, 1464
FspBI CTAG 7 cut(s) 206, 845, 1182, 1242, 1370, 1769, 2004
GluI GCNGC 9 cut(s) 13, 117, 120, 123, 294, 834, 1047, 1271, 1464
GsuI CTGGAG 1 cut(s) 1773
HaeIII GGCC 4 cut(s) 26, 168, 188, 1632
HapII CCGG 1 cut(s) 2042
HgaI GACGC 2 cut(s) 162, 428
HincII GTYRAC 3 cut(s) 379, 1018, 1260
HindII GTYRAC 3 cut(s) 379, 1018, 1260
HindIII AAGCTT 3 cut(s) 731, 1388, 1726
HinfI GANTC 7 cut(s) 305, 444, 1115, 1577, 1832, 1841, 1963
HpaI GTTAAC 1 cut(s) 1260
HpaII CCGG 1 cut(s) 2042
HphI GGTGA 6 cut(s) 328, 526, 877, 998, 1572, 1992
Hpy166II GTNNAC 7 cut(s) 379, 544, 1018, 1093, 1260, 1297, 1351
Hpy188III TCNNGA 9 cut(s) 128, 196, 567, 1306, 1334, 1379, 1592, 1612, 1682
Hpy8I GTNNAC 7 cut(s) 379, 544, 1018, 1093, 1260, 1297, 1351
Hpy99I CGWCG 2 cut(s) 380, 422
HpyAV CCTTC 7 cut(s) 83, 264, 389, 564, 856, 892, 1331
HpyCH4III ACNGT 4 cut(s) 1264, 1285, 1451, 1712
HpyCH4IV ACGT 2 cut(s) 375, 645
HpyF10VI GCNNNNNNNGC 6 cut(s) 76, 122, 830, 839, 1725, 1757
HpyF3I CTNAG 4 cut(s) 312, 498, 1715, 2058
HpySE526I ACGT 2 cut(s) 375, 645
Ksp22I TGATCA 2 cut(s) 198, 1987
KspAI GTTAAC 1 cut(s) 1260
Kzo9I GATC 6 cut(s) 198, 1131, 1531, 1644, 1921, 1987
LguI GCTCTTC 1 cut(s) 1892
LmnI GCTCC 5 cut(s) 75, 273, 1159, 1278, 1937
Lsp1109I GCAGC 8 cut(s) 103, 106, 134, 280, 820, 1033, 1282, 1450
LweI GCATC 4 cut(s) 24, 820, 1033, 1429
MaeI CTAG 7 cut(s) 206, 845, 1182, 1242, 1370, 1769, 2004
MaeII ACGT 2 cut(s) 375, 645
MaeIII GTNAC 7 cut(s) 514, 549, 625, 673, 1001, 1862, 1998
MalI GATC 6 cut(s) 200, 1133, 1533, 1646, 1923, 1989
MboI GATC 6 cut(s) 198, 1131, 1531, 1644, 1921, 1987
MboII GAAGA 9 cut(s) 526, 1157, 1424, 1558, 1661, 1695, 1732, 1909, 1931
MhlI GDGCHC 4 cut(s) 278, 1218, 1793, 1976
MlyI GAGTC 2 cut(s) 299, 1972
MmeI TCCRAC 6 cut(s) 332, 441, 806, 1300, 1559, 1731
MseI TTAA 8 cut(s) 660, 704, 792, 1247, 1259, 1542, 1820, 1871
MslI CAYNNNNRTG 4 cut(s) 20, 794, 854, 1133
MspA1I CMGCKG 1 cut(s) 116
MspI CCGG 1 cut(s) 2042
MspR9I CCNGG 1 cut(s) 1634
MvaI CCWGG 1 cut(s) 1634
MvnI CGCG 1 cut(s) 1593
MwoI GCNNNNNNNGC 6 cut(s) 76, 122, 830, 839, 1725, 1757
NdeI CATATG 1 cut(s) 1199
NdeII GATC 6 cut(s) 198, 1131, 1531, 1644, 1921, 1987
NlaIV GGNNCC 3 cut(s) 71, 275, 2064
NmuCI GTSAC 5 cut(s) 514, 625, 673, 1862, 1998
NruI TCGCGA 1 cut(s) 1593
NspI RCATGY 4 cut(s) 224, 550, 688, 1819
NspV TTCGAA 1 cut(s) 442
PaeR7I CTCGAG 1 cut(s) 1672
PagI TCATGA 1 cut(s) 195
PciI ACATGT 3 cut(s) 220, 546, 1815
PciSI GCTCTTC 1 cut(s) 1892
PfeI GAWTC 5 cut(s) 444, 1115, 1577, 1832, 1841
PkrI GCNGC 9 cut(s) 14, 118, 121, 124, 295, 835, 1048, 1272, 1465
PleI GAGTC 2 cut(s) 299, 1971
PpsI GAGTC 2 cut(s) 299, 1971
PpuMI RGGWCCY 1 cut(s) 1080
PscI ACATGT 3 cut(s) 220, 546, 1815
PshBI ATTAAT 1 cut(s) 792
Psp5II RGGWCCY 1 cut(s) 1080
Psp6I CCWGG 1 cut(s) 1632
PspGI CCWGG 1 cut(s) 1632
PspN4I GGNNCC 3 cut(s) 71, 275, 2064
PspPI GGNCC 4 cut(s) 25, 167, 1080, 2063
PspPPI RGGWCCY 1 cut(s) 1080
PspXI VCTCGAGB 1 cut(s) 1672
PstI CTGCAG 1 cut(s) 124
PstNI CAGNNNCTG 2 cut(s) 119, 1118
PvuII CAGCTG 1 cut(s) 116
RruI TCGCGA 1 cut(s) 1593
RsaI GTAC 5 cut(s) 374, 874, 1444, 1767, 1984
RsaNI GTAC 5 cut(s) 373, 873, 1443, 1766, 1983
RseI CAYNNNNRTG 4 cut(s) 20, 794, 854, 1133
SalI GTCGAC 1 cut(s) 377
SapI GCTCTTC 1 cut(s) 1892
SaqAI TTAA 8 cut(s) 660, 704, 792, 1247, 1259, 1542, 1820, 1871
SatI GCNGC 9 cut(s) 13, 117, 120, 123, 294, 834, 1047, 1271, 1464
Sau3AI GATC 6 cut(s) 198, 1131, 1531, 1644, 1921, 1987
Sau96I GGNCC 4 cut(s) 25, 167, 1080, 2063
ScaI AGTACT 2 cut(s) 874, 1767
SchI GAGTC 2 cut(s) 299, 1972
ScrFI CCNGG 1 cut(s) 1634
SduI GDGCHC 4 cut(s) 278, 1218, 1793, 1976
SfaNI GCATC 4 cut(s) 24, 820, 1033, 1429
SfcI CTRYAG 1 cut(s) 120
Sfr274I CTCGAG 1 cut(s) 1672
SfuI TTCGAA 1 cut(s) 442
SinI GGWCC 2 cut(s) 1080, 2063
SlaI CTCGAG 1 cut(s) 1672
SmiMI CAYNNNNRTG 4 cut(s) 20, 794, 854, 1133
SmlI CTYRAG 2 cut(s) 734, 1672
SmoI CTYRAG 2 cut(s) 734, 1672
SsiI CCGC 2 cut(s) 1049, 1787
SspMI CTAG 7 cut(s) 206, 845, 1182, 1242, 1370, 1769, 2004
StyD4I CCNGG 1 cut(s) 1632
StyI CCWWGG 1 cut(s) 837
TaaI ACNGT 4 cut(s) 1264, 1285, 1451, 1712
TaiI ACGT 2 cut(s) 378, 648
TatI WGTACW 3 cut(s) 872, 1442, 1765
TfiI GAWTC 5 cut(s) 444, 1115, 1577, 1832, 1841
Tru1I TTAA 8 cut(s) 660, 704, 792, 1247, 1259, 1542, 1820, 1871
Tru9I TTAA 8 cut(s) 660, 704, 792, 1247, 1259, 1542, 1820, 1871
TscAI CASTG 2 cut(s) 861, 1243
TseFI GTSAC 5 cut(s) 514, 625, 673, 1862, 1998
TseI GCWGC 9 cut(s) 12, 116, 119, 122, 293, 833, 1046, 1270, 1463
Tsp45I GTSAC 5 cut(s) 514, 625, 673, 1862, 1998
TspDTI ATGAA 8 cut(s) 184, 526, 546, 654, 914, 1488, 1818, 1833
TspGWI ACGGA 1 cut(s) 692
TspRI CASTG 2 cut(s) 861, 1243
VpaK11BI GGWCC 2 cut(s) 1080, 2063
VspI ATTAAT 1 cut(s) 792
XagI CCTNNNNNAGG 1 cut(s) 558
XapI RAATTY 4 cut(s) 570, 636, 764, 799
XceI RCATGY 4 cut(s) 224, 550, 688, 1819
XhoI CTCGAG 1 cut(s) 1672
XmiI GTMKAC 1 cut(s) 378
XspI CTAG 7 cut(s) 206, 845, 1182, 1242, 1370, 1769, 2004
ZrmI AGTACT 2 cut(s) 874, 1767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.