Rw6G043280

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
66657468 .. 66668056
10589 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G043280.1

Sequence Viewer

Length: 2907 bp
ATGCAATGCAAACGTTTAGCTTTAAGCATGATTAAGAATAATTCTACCGACCCTGTTTTTCTGCTCTTTTTCCTGTTCTTCAGGATTAATTTCTTGGCCTTGGCACAAAACACGACTATTCCAGTAAATGTGGGAGTGATTCTTGACTTGGATACCAGGTTTGGGAAATTGGGGCTGAGCTGCATCAACATGGCCCTCTCCGACTTCTATGCCTCTCATGCTTACTACCATACTAGGCTGGTCCTACACAAAAGGGACTCTGCGGAAGATGTTGTTGTGGCAGCTGGTGCAGCTCTGGACTTGATAAACAATGTTAAAGTGCAAGCCATCATAGGGCCACAATCATCAATGCAAGCAAATTTTGTAACTGAACTTGGAGATAAAGCTCAGGTGCCCATAATCTCATTTTCAGCAACAAGCCCTTCCCTTGGGAATTCATACTTCATCCGAATTGCACAAAATGACACATCTCAAGTGAAAGTCATAAGTGCCATCATCCAGGCCTTTGGTTGGACTGAAGCAGTGCCCATCAGCGTTGATGATGAGTTTGGAAGGGGAGTAATACCTTATCTGACTACTGCTTTGCAAGCTATTGGTGCTCGCACTCCCTACTGGGTTGTCATTCCTTCAATGGCAACTGATAAACAAATAGATGCAGAGCTTCAAAAGTTGATGAAAATGAAAACCAGGGTCTTCATAGTGCACATGTTGCCTTCTCTTGGCTCTCGACTTTTTTCCAGGGCAAATGCAATGGGAATGATGGAAAAAGGCTTTGCTTGGATAGTGACAAATGACATGACTAGCTTCTTTAGTTCCTCAAATTATTCTGTCATAGATAACATGCAAGGGGTGTTGGGTGTAAAGACTTACGTTCCAAATACAGAGCAGCTTGAGAATTTTAGAGGTAGATGGCAAAGGAAATTCCAACAAGACAATCCAACTCTCCTCGATGTTAAATTGGATGTTTCCGGACTGTGGGCTTATGACGCGGCTTGGGCACTAGCCACGGCAGTTGAGAAGGTACAGATTACAAACTTCCCTGCCCGCAAGATGAACATTTCTGGTAGTTCCACTGATTTAGAAAGATTGGAGATCTCTCACAGTGGTCCTGAACTTGTCCGAGAACTATGGGGTACGAGATTTACCGGACTTTCAGGAGATTTCAGTCTTATTGATGGACAATTACAATCATCAACTTTTCAGGTAGTTAATGTGAACGATAATGGGGAAAGAGGGGTTGGATATTGGACACCCCACAATGGACTCGTACGAAACTTAAAAAACACAAACAGCTATGCTACTTCTAATGCCAGTCTTGGAACTATCATATGGCCTGGAGACACTAACTCAATTCCGCAGGGTTGGCAGATTCCTATGAGTGGGACAAAACTAAAAATTCTATTCCCAGTGATTCATAGTTACAAAGGATTTGTAGATGTGTCATATGATCGTAGCACTAACACAAGTAATGCCACTGGATACTGCATTGACGTCTTTAAAGCAGTAATGGACTTGTTGTCATACCCTGTCCTTTATGAGTTTTATCCCTTCGCAAAACCTGATGGTGAGACTCCAGCTGGTAATTACAATGATTTGGTTTATCAAGTGTTTCTTGGGAACTATGATGCTGCAGTTGGTGATATTACCATTAGAGCAAATAGATCCTTGTATGTCGACTTCACATTGCCATACACAGAATCTGGGATATCAATGGTAGTGCCTATCAAAGATAAAAATGACGCTAAAAATACATGGGTGTTCTTGAAACCTTTGACTAGGGATCTTTGGGTAGCAATCGGTTGTTTTTTCGTATTCATTGGTTTTGAAGTCTGGGTTCTTGAACACCGGATAAATAAAGACTTCCGAGGGCCTCCACTTCATCAAATTGGCACAAGCTTTTGGTTCTCATTCTCAACCATGGTTTTTGCACAAAGGGAGCGAGTACTGACCAACTTGGCTAGGTTTGTTGTGATAGTATGGTGCTTTGTTGTTCTCATACTAACTCAAAGTTATACCGCGAGTTTTAGTTCAATTTTAACAGTTCAACAGCTTCAACCAGTCAATACTGATGTAAACCTGCTGTTGAAAAATGGGAACAGTGTTGGCTATAAGTCAGGTCATTTTAGTTATGGGATTTTGAAGGAAGCCGGATTTCAAGACGCAAACCTTTTGTCATATGACTCTCCAAAAGAACTGGATGAACTCTTTCAAAATGGGAATGAAAAACATGGTATTTCAGCTGCTTTTGATGAAACCCCATACATGAAACTTTTTCTTGCAACTTATTGTTCAAAATATGCCATGGTTGAGCCAACATTTAAATCTGATGGTTTTGCCTTTGCCTTCCAAAAAGGTTCACTCCTCACACGTTATGTTTCAAGGGAAATCGAGAGAACTCACATGACGAAAATTGAGGGAAAATGGTTTACAAGTTGTTCAAACTCCACCTCAGGGGACTCTTCCAGCAATCTTACTCTAACGGTTGATAGCTTTTGGGGGCTCTTTATCATTGCTGGGGTTGCTTCATCATTGGCTCTCCTCATATTTGCAGCCATGTTCTTTTATGAGCGCAGGCACACCTTGCTGAACCTTGATCCAGAAACCACATTTTGGGGAAGAATTCGTGCGATATTGAGGATATATGATCGGAGAGACCCCACTTCGCACACTTATAACAGGAGAGGACTGCAAGATCCTGTTCATGGTCTAAGTGCAGTTGAATCCTTACCAGACACTAATTCTTCCGCGAGGGCATCAAGTGCGAACCGCATCGACTCACACATTGATCTTGAACAGCATGTCCGGACTGAGCATGCTGACTTGAATCCCAACACTCAAGCAACCCAAGAGATTGAAGATGCAATTGACTTGACCTCCTCCAGTGAACAGAGGCCAGTGCCTCATTAG

Protein Analysis

968

Amino Acids

108.28

Weight (kDa)

6.2

Isoelectric Point (pI)

30.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 41 - 350 4.4e-21 Periplasmic binding protein
ANF_receptor PF01094 61 - 407 8.4e-78 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 483 - 574 5.8e-11 Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan PF00060 594 - 841 9.6e-34 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2673
AatII GACGTC 1 cut(s) 1494
Acc36I ACCTGC 1 cut(s) 2085
AccB1I GGYRCC 1 cut(s) 391
AccB7I CCANNNNNTGG 1 cut(s) 2610
AccI GTMKAC 1 cut(s) 1674
AccII CGCG 3 cut(s) 989, 2018, 2747
AccIII TCCGGA 2 cut(s) 968, 2802
AciI CCGC 7 cut(s) 263, 989, 1045, 1355, 2016, 2745, 2767
AclI AACGTT 1 cut(s) 13
AclWI GGATC 4 cut(s) 1656, 1788, 2588, 2687
AcsI RAATTY 6 cut(s) 358, 433, 895, 920, 1395, 2619
AcuI CTGAAG 2 cut(s) 64, 537
AcyI GRCGYC 1 cut(s) 1491
AfaI GTAC 4 cut(s) 1023, 1135, 1269, 1944
AflIII ACRYGT 2 cut(s) 705, 2366
AhdI GACNNNNNGTC 1 cut(s) 1516
AjnI CCWGG 5 cut(s) 155, 498, 686, 737, 1333
AjuI GAANNNNNNNTTGG 2 cut(s) 1221, 1253
AloI GAACNNNNNNTCC 2 cut(s) 2784, 2816
Alw21I GWGCWC 2 cut(s) 601, 705
Alw26I GTCTC 3 cut(s) 1332, 1562, 2646
Alw44I GTGCAC 1 cut(s) 701
AlwI GGATC 4 cut(s) 1656, 1788, 2588, 2687
AlwNI CAGNNNCTG 1 cut(s) 1700
Aor13HI TCCGGA 2 cut(s) 968, 2802
AoxI GGCC 7 cut(s) 96, 192, 335, 501, 1331, 1868, 2891
ApaLI GTGCAC 1 cut(s) 701
ApeKI GCWGC 7 cut(s) 180, 281, 290, 886, 1628, 2240, 2549
ApoI RAATTY 6 cut(s) 358, 433, 895, 920, 1395, 2619
ArsI GACNNNNNNTTYG 4 cut(s) 565, 597, 2156, 2188
AseI ATTAAT 1 cut(s) 87
Asp700I GAANNNNTTC 1 cut(s) 2205
AspLEI GCGC 1 cut(s) 2571
AspS9I GGNCC 5 cut(s) 193, 241, 335, 1106, 1868
AsuHPI GGTGA 2 cut(s) 1577, 1649
AvaII GGWCC 2 cut(s) 241, 1106
AxyI CCTNAGG 1 cut(s) 2449
BaeGI GKGCMC 4 cut(s) 396, 528, 705, 1000
BanI GGYRCC 1 cut(s) 391
BanII GRGCYC 1 cut(s) 2502
BarI GAAGNNNNNNTAC 2 cut(s) 1661, 1693
BbsI GAAGAC 1 cut(s) 685
Bbv12I GWGCWC 2 cut(s) 601, 705
BbvI GCAGC 7 cut(s) 167, 293, 302, 898, 1615, 2227, 2561
BccI CCATC 8 cut(s) 335, 500, 536, 754, 903, 1169, 1556, 2321
BceAI ACGGC 1 cut(s) 1023
BcgI CGANNNNNNTGC 2 cut(s) 191, 225
BciT130I CCWGG 5 cut(s) 157, 500, 688, 739, 1335
BciVI GTATCC 2 cut(s) 145, 1472
BcoDI GTCTC 3 cut(s) 1332, 1562, 2646
BfaI CTAG 5 cut(s) 234, 801, 1001, 1776, 1959
BfmI CTRYAG 1 cut(s) 1629
BfuAI ACCTGC 1 cut(s) 2085
BfuI GTATCC 2 cut(s) 145, 1472
BglII AGATCT 1 cut(s) 1092
BisI GCNGC 8 cut(s) 181, 282, 291, 887, 990, 1629, 2241, 2550
BlpI GCTNAGC 1 cut(s) 176
BlsI GCNGC 8 cut(s) 182, 283, 292, 888, 991, 1630, 2242, 2551
BmcAI AGTACT 1 cut(s) 1944
Bme1390I CCNGG 5 cut(s) 157, 500, 688, 739, 1335
Bme18I GGWCC 2 cut(s) 241, 1106
BmeRI GACNNNNNGTC 1 cut(s) 1516
BmgT120I GGNCC 5 cut(s) 193, 241, 335, 1106, 1868
BmiI GGNNCC 1 cut(s) 393
BmrFI CCNGG 5 cut(s) 157, 500, 688, 739, 1335
BmrI ACTGGG 2 cut(s) 622, 1400
BmsI GCATC 6 cut(s) 192, 643, 1615, 2762, 2778, 2848
BmuI ACTGGG 2 cut(s) 622, 1400
BpiI GAAGAC 1 cut(s) 685
BpmI CTGGAG 3 cut(s) 1356, 1557, 2863
Bpu10I CCTNAGC 1 cut(s) 387
Bpu1102I GCTNAGC 1 cut(s) 176
BpuEI CTTGAG 3 cut(s) 456, 911, 2820
BsaHI GRCGYC 1 cut(s) 1491
BsaI GGTCTC 1 cut(s) 2646
BsaJI CCNNGG 8 cut(s) 99, 427, 687, 738, 1005, 1864, 1917, 2301
BsaWI WCCGGW 4 cut(s) 968, 1145, 1845, 2802
BsaXI ACNNNNNCTCC 2 cut(s) 2858, 2888
Bse1I ACTGG 9 cut(s) 122, 617, 1311, 1406, 1480, 2057, 2199, 2880, 2894
Bse21I CCTNAGG 1 cut(s) 2449
Bse3DI GCAATG 4 cut(s) 11, 756, 1682, 2508
BseAI TCCGGA 2 cut(s) 968, 2802
BseBI CCWGG 5 cut(s) 157, 500, 688, 739, 1335
BseDI CCNNGG 8 cut(s) 99, 427, 687, 738, 1005, 1864, 1917, 2301
BseGI GGATG 4 cut(s) 444, 495, 967, 2203
BseMI GCAATG 4 cut(s) 11, 756, 1682, 2508
BseMII CTCAG 4 cut(s) 167, 401, 2463, 2799
BseNI ACTGG 9 cut(s) 122, 617, 1311, 1406, 1480, 2057, 2199, 2880, 2894
BseRI GAGGAG 4 cut(s) 935, 2351, 2528, 2866
BseSI GKGCMC 4 cut(s) 396, 528, 705, 1000
BseXI GCAGC 7 cut(s) 167, 293, 302, 898, 1615, 2227, 2561
BseYI CCCAGC 1 cut(s) 2513
BsgI GTGCAG 2 cut(s) 309, 2733
Bsh1236I CGCG 3 cut(s) 989, 2018, 2747
BshFI GGCC 7 cut(s) 98, 194, 337, 503, 1333, 1870, 2893
BshNI GGYRCC 1 cut(s) 391
BsiHKAI GWGCWC 2 cut(s) 601, 705
BsiSI CCGG 5 cut(s) 969, 1146, 1846, 2148, 2803
BsiWI CGTACG 1 cut(s) 1267
BslFI GGGAC 3 cut(s) 269, 1396, 2468
BsmAI GTCTC 3 cut(s) 1332, 1562, 2646
BsmFI GGGAC 3 cut(s) 269, 1396, 2468
BsnI GGCC 7 cut(s) 98, 194, 337, 503, 1333, 1870, 2893
Bso31I GGTCTC 1 cut(s) 2646
Bsp1286I GDGCHC 6 cut(s) 396, 528, 601, 705, 1000, 2502
Bsp13I TCCGGA 2 cut(s) 968, 2802
Bsp143I GATC 8 cut(s) 1092, 1447, 1661, 1780, 2593, 2644, 2692, 2785
Bsp1720I GCTNAGC 1 cut(s) 176
Bsp19I CCATGG 2 cut(s) 1917, 2301
BspACI CCGC 7 cut(s) 263, 989, 1045, 1355, 2016, 2745, 2767
BspANI GGCC 7 cut(s) 98, 194, 337, 503, 1333, 1870, 2893
BspCNI CTCAG 4 cut(s) 168, 400, 2462, 2800
BspEI TCCGGA 2 cut(s) 968, 2802
BspFNI CGCG 3 cut(s) 989, 2018, 2747
BspLI GGNNCC 1 cut(s) 393
BspMAI CTGCAG 1 cut(s) 1633
BspMI ACCTGC 1 cut(s) 2085
BspPI GGATC 4 cut(s) 1656, 1788, 2588, 2687
BspT107I GGYRCC 1 cut(s) 391
BspTNI GGTCTC 1 cut(s) 2646
BsrDI GCAATG 4 cut(s) 11, 756, 1682, 2508
BsrI ACTGG 9 cut(s) 122, 617, 1311, 1406, 1480, 2057, 2199, 2880, 2894
BssECI CCNNGG 8 cut(s) 99, 427, 687, 738, 1005, 1864, 1917, 2301
BssMI GATC 8 cut(s) 1092, 1447, 1661, 1780, 2593, 2644, 2692, 2785
BssNI GRCGYC 1 cut(s) 1491
BssT1I CCWWGG 4 cut(s) 99, 427, 1917, 2301
Bst2UI CCWGG 5 cut(s) 157, 500, 688, 739, 1335
Bst4CI ACNGT 5 cut(s) 975, 1103, 2041, 2099, 2482
Bst6I CTCTTC 1 cut(s) 2464
BstACI GRCGYC 1 cut(s) 1491
BstAPI GCANNNNNTGC 4 cut(s) 287, 709, 2581, 2759
BstC8I GCNNGC 7 cut(s) 324, 354, 588, 601, 1045, 2573, 2814
BstDEI CTNAG 5 cut(s) 176, 387, 2449, 2708, 2808
BstDSI CCRYGG 3 cut(s) 1005, 1917, 2301
BstF5I GGATG 4 cut(s) 444, 495, 967, 2203
BstFNI CGCG 3 cut(s) 989, 2018, 2747
BstHHI GCGC 1 cut(s) 2571
BstKTI GATC 8 cut(s) 1095, 1450, 1664, 1783, 2596, 2647, 2695, 2788
BstMAI GTCTC 3 cut(s) 1332, 1562, 2646
BstMBI GATC 8 cut(s) 1092, 1447, 1661, 1780, 2593, 2644, 2692, 2785
BstNI CCWGG 5 cut(s) 157, 500, 688, 739, 1335
BstNSI RCATGY 4 cut(s) 709, 844, 2801, 2816
BstSCI CCNGG 5 cut(s) 155, 498, 686, 737, 1333
BstSFI CTRYAG 1 cut(s) 1629
BstSLI GKGCMC 4 cut(s) 396, 528, 705, 1000
BstUI CGCG 3 cut(s) 989, 2018, 2747
BstV1I GCAGC 7 cut(s) 167, 293, 302, 898, 1615, 2227, 2561
BstV2I GAAGAC 1 cut(s) 685
BstX2I RGATCY 4 cut(s) 1092, 1661, 1780, 2692
BstXI CCANNNNNNTGG 1 cut(s) 506
BstYI RGATCY 4 cut(s) 1092, 1661, 1780, 2692
Bsu36I CCTNAGG 1 cut(s) 2449
BsuI GTATCC 2 cut(s) 145, 1472
BsuRI GGCC 7 cut(s) 98, 194, 337, 503, 1333, 1870, 2893
BtgI CCRYGG 3 cut(s) 1005, 1917, 2301
BtsCI GGATG 4 cut(s) 444, 495, 967, 2203
BtsI GCAGTG 1 cut(s) 528
BtsIMutI CAGTG 8 cut(s) 528, 1071, 1108, 1413, 1473, 2104, 2887, 2901
BveI ACCTGC 1 cut(s) 2085
Cac8I GCNNGC 7 cut(s) 324, 354, 588, 601, 1045, 2573, 2814
CaiI CAGNNNCTG 1 cut(s) 1700
CfoI GCGC 1 cut(s) 2571
Cfr13I GGNCC 5 cut(s) 193, 241, 335, 1106, 1868
CseI GACGC 3 cut(s) 995, 1748, 2168
CsiI ACCWGGT 1 cut(s) 155
Csp6I GTAC 4 cut(s) 1022, 1134, 1268, 1943
CspCI CAANNNNNGTGG 2 cut(s) 994, 1029
CviQI GTAC 4 cut(s) 1022, 1134, 1268, 1943
DdeI CTNAG 5 cut(s) 176, 387, 2449, 2708, 2808
DpnI GATC 8 cut(s) 1094, 1449, 1663, 1782, 2595, 2646, 2694, 2787
DpnII GATC 8 cut(s) 1092, 1447, 1661, 1780, 2593, 2644, 2692, 2785
DraI TTTAAA 2 cut(s) 1498, 2320
DriI GACNNNNNGTC 1 cut(s) 1516
Eam1104I CTCTTC 1 cut(s) 2464
Eam1105I GACNNNNNGTC 1 cut(s) 1516
EarI CTCTTC 1 cut(s) 2464
Eco130I CCWWGG 4 cut(s) 99, 427, 1917, 2301
Eco147I AGGCCT 1 cut(s) 503
Eco24I GRGCYC 1 cut(s) 2502
Eco31I GGTCTC 1 cut(s) 2646
Eco32I GATATC 1 cut(s) 1707
Eco47I GGWCC 2 cut(s) 241, 1106
Eco57I CTGAAG 2 cut(s) 64, 537
Eco81I CCTNAGG 1 cut(s) 2449
EcoO109I RGGNCCY 1 cut(s) 1868
EcoRI GAATTC 2 cut(s) 433, 2619
EcoRII CCWGG 5 cut(s) 155, 498, 686, 737, 1333
EcoRV GATATC 1 cut(s) 1707
EcoT14I CCWWGG 4 cut(s) 99, 427, 1917, 2301
EcoT38I GRGCYC 1 cut(s) 2502
ErhI CCWWGG 4 cut(s) 99, 427, 1917, 2301
FalI AAGNNNNNCTT 2 cut(s) 1596, 1628
FaqI GGGAC 3 cut(s) 269, 1396, 2468
FauI CCCGC 1 cut(s) 1052
FauNDI CATATG 3 cut(s) 1328, 1444, 2176
FblI GTMKAC 1 cut(s) 1674
Fnu4HI GCNGC 8 cut(s) 181, 282, 291, 887, 990, 1629, 2241, 2550
FokI GGATG 4 cut(s) 431, 482, 974, 2210
FriOI GRGCYC 1 cut(s) 2502
Fsp4HI GCNGC 8 cut(s) 181, 282, 291, 887, 990, 1629, 2241, 2550
FspBI CTAG 5 cut(s) 234, 801, 1001, 1776, 1959
GlaI GCGC 1 cut(s) 2570
GluI GCNGC 8 cut(s) 181, 282, 291, 887, 990, 1629, 2241, 2550
GsaI CCCAGC 1 cut(s) 2517
GsuI CTGGAG 3 cut(s) 1356, 1557, 2863
HaeIII GGCC 7 cut(s) 98, 194, 337, 503, 1333, 1870, 2893
HapII CCGG 5 cut(s) 969, 1146, 1846, 2148, 2803
HgaI GACGC 3 cut(s) 995, 1748, 2168
HhaI GCGC 1 cut(s) 2571
Hin1I GRCGYC 1 cut(s) 1491
Hin6I GCGC 1 cut(s) 2569
HinP1I GCGC 1 cut(s) 2569
HincII GTYRAC 1 cut(s) 1675
HindII GTYRAC 1 cut(s) 1675
HindIII AAGCTT 1 cut(s) 1894
HpaII CCGG 5 cut(s) 969, 1146, 1846, 2148, 2803
HphI GGTGA 2 cut(s) 1577, 1649
Hpy166II GTNNAC 7 cut(s) 703, 1216, 1675, 2074, 2357, 2427, 2885
Hpy188I TCNGA 7 cut(s) 202, 449, 573, 1121, 1865, 2326, 2649
Hpy8I GTNNAC 7 cut(s) 703, 1216, 1675, 2074, 2357, 2427, 2885
HpyAV CCTTC 8 cut(s) 432, 546, 636, 723, 1012, 1558, 2134, 2353
HpyCH4III ACNGT 5 cut(s) 975, 1103, 2041, 2099, 2482
HpyCH4IV ACGT 4 cut(s) 13, 870, 1491, 2368
HpyF3I CTNAG 5 cut(s) 176, 387, 2449, 2708, 2808
HpySE526I ACGT 4 cut(s) 13, 870, 1491, 2368
Hsp92I GRCGYC 1 cut(s) 1491
HspAI GCGC 1 cut(s) 2569
Kpn2I TCCGGA 2 cut(s) 968, 2802
Kzo9I GATC 8 cut(s) 1092, 1447, 1661, 1780, 2593, 2644, 2692, 2785
LmnI GCTCC 1 cut(s) 1936
Lsp1109I GCAGC 7 cut(s) 167, 293, 302, 898, 1615, 2227, 2561
LweI GCATC 6 cut(s) 192, 643, 1615, 2762, 2778, 2848
MabI ACCWGGT 1 cut(s) 155
MaeI CTAG 5 cut(s) 234, 801, 1001, 1776, 1959
MaeII ACGT 4 cut(s) 13, 870, 1491, 2368
MaeIII GTNAC 3 cut(s) 364, 784, 1418
MalI GATC 8 cut(s) 1094, 1449, 1663, 1782, 2595, 2646, 2694, 2787
MboI GATC 8 cut(s) 1092, 1447, 1661, 1780, 2593, 2644, 2692, 2785
MboII GAAGA 7 cut(s) 70, 278, 685, 2451, 2628, 2733, 2867
MfeI CAATTG 1 cut(s) 2862
MflI RGATCY 4 cut(s) 1092, 1661, 1780, 2692
MhlI GDGCHC 6 cut(s) 396, 528, 601, 705, 1000, 2502
MlyI GAGTC 6 cut(s) 251, 1257, 1564, 2174, 2450, 2768
MmeI TCCRAC 5 cut(s) 225, 491, 949, 962, 1219
MroI TCCGGA 2 cut(s) 968, 2802
MroXI GAANNNNTTC 1 cut(s) 2205
MslI CAYNNNNRTG 1 cut(s) 188
MspA1I CMGCKG 3 cut(s) 284, 1577, 2240
MspI CCGG 5 cut(s) 969, 1146, 1846, 2148, 2803
MspR9I CCNGG 5 cut(s) 157, 500, 688, 739, 1335
MunI CAATTG 1 cut(s) 2862
MvaI CCWGG 5 cut(s) 157, 500, 688, 739, 1335
MvnI CGCG 3 cut(s) 989, 2018, 2747
NcoI CCATGG 2 cut(s) 1917, 2301
NdeI CATATG 3 cut(s) 1328, 1444, 2176
NdeII GATC 8 cut(s) 1092, 1447, 1661, 1780, 2593, 2644, 2692, 2785
NlaIV GGNNCC 1 cut(s) 393
NmuCI GTSAC 1 cut(s) 784
NspI RCATGY 4 cut(s) 709, 844, 2801, 2816
PaeI GCATGC 1 cut(s) 2816
PceI AGGCCT 1 cut(s) 503
PciI ACATGT 1 cut(s) 705
PdmI GAANNNNTTC 1 cut(s) 2205
PfeI GAWTC 6 cut(s) 139, 1369, 1411, 1697, 2720, 2824
Pfl23II CGTACG 1 cut(s) 1267
PflMI CCANNNNNTGG 1 cut(s) 2610
PkrI GCNGC 8 cut(s) 182, 283, 292, 888, 991, 1630, 2242, 2551
PleI GAGTC 6 cut(s) 251, 1257, 1564, 2174, 2450, 2768
PpsI GAGTC 6 cut(s) 251, 1257, 1564, 2174, 2450, 2768
PscI ACATGT 1 cut(s) 705
PshBI ATTAAT 1 cut(s) 87
PsiI TTATAA 1 cut(s) 2673
Psp1406I AACGTT 1 cut(s) 13
Psp6I CCWGG 5 cut(s) 155, 498, 686, 737, 1333
PspFI CCCAGC 1 cut(s) 2513
PspGI CCWGG 5 cut(s) 155, 498, 686, 737, 1333
PspLI CGTACG 1 cut(s) 1267
PspN4I GGNNCC 1 cut(s) 393
PspPI GGNCC 5 cut(s) 193, 241, 335, 1106, 1868
PstI CTGCAG 1 cut(s) 1633
PstNI CAGNNNCTG 1 cut(s) 1700
PsuI RGATCY 4 cut(s) 1092, 1661, 1780, 2692
PvuII CAGCTG 3 cut(s) 284, 1577, 2240
RsaI GTAC 4 cut(s) 1023, 1135, 1269, 1944
RsaNI GTAC 4 cut(s) 1022, 1134, 1268, 1943
RseI CAYNNNNRTG 1 cut(s) 188
SalI GTCGAC 1 cut(s) 1673
SatI GCNGC 8 cut(s) 181, 282, 291, 887, 990, 1629, 2241, 2550
Sau3AI GATC 8 cut(s) 1092, 1447, 1661, 1780, 2593, 2644, 2692, 2785
Sau96I GGNCC 5 cut(s) 193, 241, 335, 1106, 1868
ScaI AGTACT 1 cut(s) 1944
SchI GAGTC 6 cut(s) 251, 1257, 1564, 2174, 2450, 2768
ScrFI CCNGG 5 cut(s) 157, 500, 688, 739, 1335
SduI GDGCHC 6 cut(s) 396, 528, 601, 705, 1000, 2502
SexAI ACCWGGT 1 cut(s) 155
SfaNI GCATC 6 cut(s) 192, 643, 1615, 2762, 2778, 2848
SfcI CTRYAG 1 cut(s) 1629
SinI GGWCC 2 cut(s) 241, 1106
SmiI ATTTAAAT 1 cut(s) 2320
SmiMI CAYNNNNRTG 1 cut(s) 188
SmlI CTYRAG 3 cut(s) 471, 890, 2835
SmoI CTYRAG 3 cut(s) 471, 890, 2835
SphI GCATGC 1 cut(s) 2816
SseBI AGGCCT 1 cut(s) 503
SsiI CCGC 7 cut(s) 263, 989, 1045, 1355, 2016, 2745, 2767
SspMI CTAG 5 cut(s) 234, 801, 1001, 1776, 1959
StuI AGGCCT 1 cut(s) 503
StyD4I CCNGG 5 cut(s) 155, 498, 686, 737, 1333
StyI CCWWGG 4 cut(s) 99, 427, 1917, 2301
SwaI ATTTAAAT 1 cut(s) 2320
TaaI ACNGT 5 cut(s) 975, 1103, 2041, 2099, 2482
TaiI ACGT 4 cut(s) 16, 873, 1494, 2371
TaqI TCGA 5 cut(s) 727, 948, 1674, 2388, 2772
TatI WGTACW 1 cut(s) 1942
TauI GCSGC 1 cut(s) 992
TfiI GAWTC 6 cut(s) 139, 1369, 1411, 1697, 2720, 2824
TscAI CASTG 8 cut(s) 528, 1078, 1108, 1413, 1480, 2104, 2887, 2901
TseFI GTSAC 1 cut(s) 784
TseI GCWGC 7 cut(s) 180, 281, 290, 886, 1628, 2240, 2549
Tsp45I GTSAC 1 cut(s) 784
TspRI CASTG 8 cut(s) 528, 1078, 1108, 1413, 1480, 2104, 2887, 2901
Van91I CCANNNNNTGG 1 cut(s) 2610
VneI GTGCAC 1 cut(s) 701
VpaK11BI GGWCC 2 cut(s) 241, 1106
VspI ATTAAT 1 cut(s) 87
XapI RAATTY 6 cut(s) 358, 433, 895, 920, 1395, 2619
XceI RCATGY 4 cut(s) 709, 844, 2801, 2816
XmiI GTMKAC 1 cut(s) 1674
XmnI GAANNNNTTC 1 cut(s) 2205
XspI CTAG 5 cut(s) 234, 801, 1001, 1776, 1959
ZraI GACGTC 1 cut(s) 1492
ZrmI AGTACT 1 cut(s) 1944
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.