isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G75730 AT1G75730 |
| fragaria_vesca | FvH4_2g38520 FvH4_2g38520 FvH4_2g38520 FvH4_2g38520 FvH4_2g38520 FvH4_2g38520 |
| malus_domestica | MD08G1013300.v1.1 MD15G1012700.v1.1 |
| prunus_persica | Prupe.1G365800_v2.0.a1 |
| pyrus_communis | pycom08g01170 pycom15g01100 |
| rosa_chinensis | RchiOBHm_Chr3g0493711 RchiOBHm_Chr6g0302801 |
| rosa_laevigata | RLG00000011136 |
| rosa_multiflora | Rmu_ssc0000460.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00128160 Rroxscaffold_7G00165310 |
| rosa_rugosa | Rorug06G0317100 Rorug06G0317200 Rorug06G0317300 Rorug06G0317300 Rorug06G0317300 |
| rosa_samantha | Rh6AG430500 Rh6BG472100 Rh6CG443000 Rh6DG429700 |
| rosa_wichuraiana | Rw4G032330 Rw6G037290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1978 |
| Acc16I | TGCGCA | 1 cut(s) | 1288 |
| Acc36I | ACCTGC | 1 cut(s) | 1978 |
| AccB1I | GGYRCC | 1 cut(s) | 1966 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1835 |
| AccBSI | CCGCTC | 1 cut(s) | 139 |
| AccI | GTMKAC | 2 cut(s) | 1202, 1299 |
| AccII | CGCG | 1 cut(s) | 304 |
| AciI | CCGC | 7 cut(s) | 139, 302, 304, 1179, 1194, 1784, 2028 |
| AclWI | GGATC | 4 cut(s) | 459, 1377, 1390, 1561 |
| AcoI | YGGCCR | 2 cut(s) | 537, 2029 |
| AcsI | RAATTY | 3 cut(s) | 364, 809, 1173 |
| AcuI | CTGAAG | 3 cut(s) | 594, 1735, 1764 |
| AdeI | CACNNNGTG | 1 cut(s) | 1936 |
| AfaI | GTAC | 3 cut(s) | 166, 775, 1946 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 411, 412, 1835, 1947 |
| AjiI | CACGTC | 2 cut(s) | 19, 26 |
| AjnI | CCWGG | 4 cut(s) | 1062, 1096, 1181, 2143 |
| Alw21I | GWGCWC | 2 cut(s) | 160, 2224 |
| Alw44I | GTGCAC | 1 cut(s) | 2220 |
| AlwI | GGATC | 4 cut(s) | 459, 1377, 1390, 1561 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1007 |
| Ama87I | CYCGRG | 2 cut(s) | 12, 1557 |
| AoxI | GGCC | 9 cut(s) | 537, 702, 1094, 1481, 1785, 1794, 1938, 1949, 2029 |
| ApaLI | GTGCAC | 1 cut(s) | 2220 |
| ApoI | RAATTY | 3 cut(s) | 364, 809, 1173 |
| AspLEI | GCGC | 3 cut(s) | 333, 1289, 2253 |
| AspS9I | GGNCC | 7 cut(s) | 1060, 1082, 1786, 1795, 1838, 1939, 2075 |
| AsuHPI | GGTGA | 1 cut(s) | 1563 |
| AvaI | CYCGRG | 2 cut(s) | 12, 1557 |
| AvaII | GGWCC | 4 cut(s) | 1060, 1082, 1838, 2075 |
| BaeGI | GKGCMC | 1 cut(s) | 2224 |
| BamHI | GGATCC | 1 cut(s) | 1382 |
| BanI | GGYRCC | 1 cut(s) | 1966 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1335, 1367 |
| BbsI | GAAGAC | 1 cut(s) | 1098 |
| Bbv12I | GWGCWC | 2 cut(s) | 160, 2224 |
| BccI | CCATC | 6 cut(s) | 361, 721, 934, 1150, 1675, 2178 |
| BceAI | ACGGC | 1 cut(s) | 1980 |
| BciT130I | CCWGG | 4 cut(s) | 1064, 1098, 1183, 2145 |
| BclI | TGATCA | 2 cut(s) | 286, 745 |
| BfaI | CTAG | 6 cut(s) | 717, 1128, 1449, 1467, 1650, 2069 |
| BfmI | CTRYAG | 4 cut(s) | 1802, 1971, 2231, 2242 |
| BfoI | RGCGCY | 1 cut(s) | 2254 |
| BfuAI | ACCTGC | 1 cut(s) | 1978 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1793 |
| BmcAI | AGTACT | 1 cut(s) | 775 |
| Bme1390I | CCNGG | 4 cut(s) | 1064, 1098, 1183, 2145 |
| Bme18I | GGWCC | 4 cut(s) | 1060, 1082, 1838, 2075 |
| BmeT110I | CYCGRG | 2 cut(s) | 12, 1557 |
| BmgBI | CACGTC | 2 cut(s) | 19, 26 |
| BmgT120I | GGNCC | 7 cut(s) | 1060, 1082, 1786, 1795, 1838, 1939, 2075 |
| BmiI | GGNNCC | 4 cut(s) | 31, 1384, 1665, 1968 |
| BmrFI | CCNGG | 4 cut(s) | 1064, 1098, 1183, 2145 |
| BmrI | ACTGGG | 3 cut(s) | 228, 1735, 1936 |
| BmsI | GCATC | 6 cut(s) | 356, 405, 550, 589, 1180, 1720 |
| BmuI | ACTGGG | 3 cut(s) | 228, 1735, 1936 |
| BpiI | GAAGAC | 1 cut(s) | 1098 |
| BpmI | CTGGAG | 4 cut(s) | 691, 1034, 1629, 2217 |
| BpuEI | CTTGAG | 2 cut(s) | 1529, 1827 |
| BsaBI | GATNNNNATC | 1 cut(s) | 603 |
| BsaJI | CCNNGG | 4 cut(s) | 302, 699, 1029, 1120 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 512, 542 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 411, 412, 1835, 1947 |
| Bse1I | ACTGG | 8 cut(s) | 234, 708, 771, 1017, 1085, 1741, 1942, 1952 |
| Bse3DI | GCAATG | 4 cut(s) | 283, 327, 393, 892 |
| Bse8I | GATNNNNATC | 1 cut(s) | 603 |
| BseBI | CCWGG | 4 cut(s) | 1064, 1098, 1183, 2145 |
| BseDI | CCNNGG | 4 cut(s) | 302, 699, 1029, 1120 |
| BseGI | GGATG | 2 cut(s) | 1195, 1278 |
| BseJI | GATNNNNATC | 1 cut(s) | 603 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 411, 412, 1835, 1947 |
| BseMI | GCAATG | 4 cut(s) | 283, 327, 393, 892 |
| BseMII | CTCAG | 5 cut(s) | 461, 471, 837, 879, 1230 |
| BseNI | ACTGG | 8 cut(s) | 234, 708, 771, 1017, 1085, 1741, 1942, 1952 |
| BseRI | GAGGAG | 1 cut(s) | 2204 |
| BseSI | GKGCMC | 1 cut(s) | 2224 |
| BseYI | CCCAGC | 3 cut(s) | 1018, 1788, 1797 |
| BsgI | GTGCAG | 2 cut(s) | 134, 993 |
| Bsh1236I | CGCG | 1 cut(s) | 304 |
| BshFI | GGCC | 9 cut(s) | 539, 704, 1096, 1483, 1787, 1796, 1940, 1951, 2031 |
| BshNI | GGYRCC | 1 cut(s) | 1966 |
| BsiHKAI | GWGCWC | 2 cut(s) | 160, 2224 |
| BsiHKCI | CYCGRG | 2 cut(s) | 12, 1557 |
| BsiSI | CCGG | 1 cut(s) | 540 |
| BslFI | GGGAC | 5 cut(s) | 119, 428, 821, 1144, 1836 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 411, 412, 1835, 1947 |
| BsmBI | CGTCTC | 2 cut(s) | 9, 16 |
| BsmFI | GGGAC | 5 cut(s) | 119, 428, 821, 1144, 1836 |
| BsnI | GGCC | 9 cut(s) | 539, 704, 1096, 1483, 1787, 1796, 1940, 1951, 2031 |
| BsoBI | CYCGRG | 2 cut(s) | 12, 1557 |
| Bsp1286I | GDGCHC | 2 cut(s) | 160, 2224 |
| Bsp143I | GATC | 8 cut(s) | 286, 314, 464, 745, 844, 931, 1382, 1553 |
| Bsp19I | CCATGG | 2 cut(s) | 1029, 1120 |
| BspACI | CCGC | 7 cut(s) | 139, 302, 304, 1179, 1194, 1784, 2028 |
| BspANI | GGCC | 9 cut(s) | 539, 704, 1096, 1483, 1787, 1796, 1940, 1951, 2031 |
| BspCNI | CTCAG | 5 cut(s) | 462, 470, 836, 878, 1229 |
| BspFNI | CGCG | 1 cut(s) | 304 |
| BspHI | TCATGA | 1 cut(s) | 841 |
| BspLI | GGNNCC | 4 cut(s) | 31, 1384, 1665, 1968 |
| BspMAI | CTGCAG | 4 cut(s) | 1806, 1975, 2235, 2246 |
| BspMI | ACCTGC | 1 cut(s) | 1978 |
| BspPI | GGATC | 4 cut(s) | 459, 1377, 1390, 1561 |
| BspQI | GCTCTTC | 2 cut(s) | 71, 1404 |
| BspT107I | GGYRCC | 1 cut(s) | 1966 |
| BsrBI | CCGCTC | 1 cut(s) | 139 |
| BsrDI | GCAATG | 4 cut(s) | 283, 327, 393, 892 |
| BsrI | ACTGG | 8 cut(s) | 234, 708, 771, 1017, 1085, 1741, 1942, 1952 |
| BssECI | CCNNGG | 4 cut(s) | 302, 699, 1029, 1120 |
| BssMI | GATC | 8 cut(s) | 286, 314, 464, 745, 844, 931, 1382, 1553 |
| BssT1I | CCWWGG | 2 cut(s) | 1029, 1120 |
| Bst2UI | CCWGG | 4 cut(s) | 1064, 1098, 1183, 2145 |
| Bst4CI | ACNGT | 6 cut(s) | 419, 481, 546, 575, 803, 2094 |
| Bst6I | CTCTTC | 3 cut(s) | 71, 873, 1404 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 967 |
| BstC8I | GCNNGC | 3 cut(s) | 1794, 1991, 2249 |
| BstDEI | CTNAG | 9 cut(s) | 143, 457, 470, 823, 865, 935, 1216, 1494, 2079 |
| BstDSI | CCRYGG | 3 cut(s) | 302, 1029, 1120 |
| BstF5I | GGATG | 2 cut(s) | 1195, 1278 |
| BstFNI | CGCG | 1 cut(s) | 304 |
| BstH2I | RGCGCY | 1 cut(s) | 2254 |
| BstHHI | GCGC | 3 cut(s) | 333, 1289, 2253 |
| BstKTI | GATC | 8 cut(s) | 289, 317, 467, 748, 847, 934, 1385, 1556 |
| BstMBI | GATC | 8 cut(s) | 286, 314, 464, 745, 844, 931, 1382, 1553 |
| BstNI | CCWGG | 4 cut(s) | 1064, 1098, 1183, 2145 |
| BstSCI | CCNGG | 4 cut(s) | 1062, 1096, 1181, 2143 |
| BstSFI | CTRYAG | 4 cut(s) | 1802, 1971, 2231, 2242 |
| BstSLI | GKGCMC | 1 cut(s) | 2224 |
| BstUI | CGCG | 1 cut(s) | 304 |
| BstV2I | GAAGAC | 1 cut(s) | 1098 |
| BstX2I | RGATCY | 3 cut(s) | 464, 1382, 1553 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1092, 1393 |
| BstYI | RGATCY | 3 cut(s) | 464, 1382, 1553 |
| BsuRI | GGCC | 9 cut(s) | 539, 704, 1096, 1483, 1787, 1796, 1940, 1951, 2031 |
| BtgI | CCRYGG | 3 cut(s) | 302, 1029, 1120 |
| BtrI | CACGTC | 2 cut(s) | 19, 26 |
| BtsCI | GGATG | 2 cut(s) | 1195, 1278 |
| BtsI | GCAGTG | 2 cut(s) | 2222, 2228 |
| BtsIMutI | CAGTG | 6 cut(s) | 585, 1010, 1959, 2090, 2222, 2228 |
| BveI | ACCTGC | 1 cut(s) | 1978 |
| Cac8I | GCNNGC | 3 cut(s) | 1794, 1991, 2249 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1007 |
| CciI | TCATGA | 1 cut(s) | 841 |
| CfoI | GCGC | 3 cut(s) | 333, 1289, 2253 |
| Cfr13I | GGNCC | 7 cut(s) | 1060, 1082, 1786, 1795, 1838, 1939, 2075 |
| Cfr42I | CCGCGG | 1 cut(s) | 305 |
| Csp6I | GTAC | 3 cut(s) | 165, 774, 1945 |
| CviQI | GTAC | 3 cut(s) | 165, 774, 1945 |
| DdeI | CTNAG | 9 cut(s) | 143, 457, 470, 823, 865, 935, 1216, 1494, 2079 |
| DpnI | GATC | 8 cut(s) | 288, 316, 466, 747, 846, 933, 1384, 1555 |
| DpnII | GATC | 8 cut(s) | 286, 314, 464, 745, 844, 931, 1382, 1553 |
| DraIII | CACNNNGTG | 1 cut(s) | 1936 |
| EaeI | YGGCCR | 2 cut(s) | 537, 2029 |
| Eam1104I | CTCTTC | 3 cut(s) | 71, 873, 1404 |
| EarI | CTCTTC | 3 cut(s) | 71, 873, 1404 |
| Eco130I | CCWWGG | 2 cut(s) | 1029, 1120 |
| Eco147I | AGGCCT | 1 cut(s) | 704 |
| Eco32I | GATATC | 1 cut(s) | 493 |
| Eco47I | GGWCC | 4 cut(s) | 1060, 1082, 1838, 2075 |
| Eco57I | CTGAAG | 3 cut(s) | 594, 1735, 1764 |
| Eco88I | CYCGRG | 2 cut(s) | 12, 1557 |
| EcoRII | CCWGG | 4 cut(s) | 1062, 1096, 1181, 2143 |
| EcoRV | GATATC | 1 cut(s) | 493 |
| EcoT14I | CCWWGG | 2 cut(s) | 1029, 1120 |
| ErhI | CCWWGG | 2 cut(s) | 1029, 1120 |
| Esp3I | CGTCTC | 2 cut(s) | 9, 16 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 126, 158, 213, 245, 1383, 1415 |
| FaqI | GGGAC | 5 cut(s) | 119, 428, 821, 1144, 1836 |
| FauI | CCCGC | 1 cut(s) | 1186 |
| FbaI | TGATCA | 2 cut(s) | 286, 745 |
| FblI | GTMKAC | 2 cut(s) | 1202, 1299 |
| FokI | GGATG | 2 cut(s) | 1202, 1285 |
| FspBI | CTAG | 6 cut(s) | 717, 1128, 1449, 1467, 1650, 2069 |
| FspI | TGCGCA | 1 cut(s) | 1288 |
| GlaI | GCGC | 3 cut(s) | 332, 1288, 2252 |
| GsaI | CCCAGC | 3 cut(s) | 1022, 1792, 1801 |
| GsuI | CTGGAG | 4 cut(s) | 691, 1034, 1629, 2217 |
| HaeII | RGCGCY | 1 cut(s) | 2254 |
| HaeIII | GGCC | 9 cut(s) | 539, 704, 1096, 1483, 1787, 1796, 1940, 1951, 2031 |
| HapII | CCGG | 1 cut(s) | 540 |
| HhaI | GCGC | 3 cut(s) | 333, 1289, 2253 |
| Hin6I | GCGC | 3 cut(s) | 331, 1287, 2251 |
| HinP1I | GCGC | 3 cut(s) | 331, 1287, 2251 |
| HincII | GTYRAC | 2 cut(s) | 913, 1825 |
| HindII | GTYRAC | 2 cut(s) | 913, 1825 |
| HindIII | AAGCTT | 1 cut(s) | 248 |
| HpaI | GTTAAC | 1 cut(s) | 1825 |
| HpaII | CCGG | 1 cut(s) | 540 |
| HphI | GGTGA | 1 cut(s) | 1563 |
| Hpy166II | GTNNAC | 7 cut(s) | 785, 913, 1203, 1300, 1825, 1978, 2222 |
| Hpy188I | TCNGA | 6 cut(s) | 214, 460, 639, 826, 931, 1336 |
| Hpy188III | TCNNGA | 8 cut(s) | 14, 54, 338, 842, 1209, 1508, 1529, 2196 |
| Hpy8I | GTNNAC | 7 cut(s) | 785, 913, 1203, 1300, 1825, 1978, 2222 |
| Hpy99I | CGWCG | 1 cut(s) | 1156 |
| HpyCH4III | ACNGT | 6 cut(s) | 419, 481, 546, 575, 803, 2094 |
| HpyCH4IV | ACGT | 2 cut(s) | 18, 25 |
| HpyF3I | CTNAG | 9 cut(s) | 143, 457, 470, 823, 865, 935, 1216, 1494, 2079 |
| HpySE526I | ACGT | 2 cut(s) | 18, 25 |
| HspAI | GCGC | 3 cut(s) | 331, 1287, 2251 |
| Ksp22I | TGATCA | 2 cut(s) | 286, 745 |
| KspAI | GTTAAC | 1 cut(s) | 1825 |
| KspI | CCGCGG | 1 cut(s) | 305 |
| Kzo9I | GATC | 8 cut(s) | 286, 314, 464, 745, 844, 931, 1382, 1553 |
| LguI | GCTCTTC | 2 cut(s) | 71, 1404 |
| LmnI | GCTCC | 4 cut(s) | 29, 1015, 1406, 1663 |
| LweI | GCATC | 6 cut(s) | 356, 405, 550, 589, 1180, 1720 |
| MaeI | CTAG | 6 cut(s) | 717, 1128, 1449, 1467, 1650, 2069 |
| MaeII | ACGT | 2 cut(s) | 18, 25 |
| MaeIII | GTNAC | 3 cut(s) | 1246, 1350, 2235 |
| MalI | GATC | 8 cut(s) | 288, 316, 466, 747, 846, 933, 1384, 1555 |
| MbiI | CCGCTC | 1 cut(s) | 139 |
| MboI | GATC | 8 cut(s) | 286, 314, 464, 745, 844, 931, 1382, 1553 |
| MflI | RGATCY | 3 cut(s) | 464, 1382, 1553 |
| MhlI | GDGCHC | 2 cut(s) | 160, 2224 |
| MluCI | AATT | 8 cut(s) | 149, 364, 578, 678, 791, 809, 984, 1173 |
| MlyI | GAGTC | 6 cut(s) | 628, 632, 986, 1045, 1076, 2201 |
| MmeI | TCCRAC | 2 cut(s) | 637, 662 |
| MseI | TTAA | 5 cut(s) | 246, 956, 1428, 1824, 2257 |
| MspA1I | CMGCKG | 4 cut(s) | 304, 1607, 1784, 1801 |
| MspI | CCGG | 1 cut(s) | 540 |
| MspR9I | CCNGG | 4 cut(s) | 1064, 1098, 1183, 2145 |
| MvaI | CCWGG | 4 cut(s) | 1064, 1098, 1183, 2145 |
| MvnI | CGCG | 1 cut(s) | 304 |
| NcoI | CCATGG | 2 cut(s) | 1029, 1120 |
| NdeII | GATC | 8 cut(s) | 286, 314, 464, 745, 844, 931, 1382, 1553 |
| NlaIV | GGNNCC | 4 cut(s) | 31, 1384, 1665, 1968 |
| NsbI | TGCGCA | 1 cut(s) | 1288 |
| PaeR7I | CTCGAG | 1 cut(s) | 12 |
| PagI | TCATGA | 1 cut(s) | 841 |
| PaqCI | CACCTGC | 1 cut(s) | 1978 |
| PceI | AGGCCT | 1 cut(s) | 704 |
| PciSI | GCTCTTC | 2 cut(s) | 71, 1404 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 125 |
| PfeI | GAWTC | 8 cut(s) | 341, 401, 590, 755, 830, 1315, 2020, 2205 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1835 |
| PfoI | TCCNGGA | 1 cut(s) | 1062 |
| PleI | GAGTC | 6 cut(s) | 628, 631, 985, 1044, 1075, 2200 |
| PpsI | GAGTC | 6 cut(s) | 628, 631, 985, 1044, 1075, 2200 |
| Psp6I | CCWGG | 4 cut(s) | 1062, 1096, 1181, 2143 |
| PspFI | CCCAGC | 3 cut(s) | 1018, 1788, 1797 |
| PspGI | CCWGG | 4 cut(s) | 1062, 1096, 1181, 2143 |
| PspN4I | GGNNCC | 4 cut(s) | 31, 1384, 1665, 1968 |
| PspPI | GGNCC | 7 cut(s) | 1060, 1082, 1786, 1795, 1838, 1939, 2075 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 157, 189, 777, 809 |
| PstI | CTGCAG | 4 cut(s) | 1806, 1975, 2235, 2246 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1007 |
| PsuI | RGATCY | 3 cut(s) | 464, 1382, 1553 |
| PvuII | CAGCTG | 2 cut(s) | 1607, 1801 |
| RsaI | GTAC | 3 cut(s) | 166, 775, 1946 |
| RsaNI | GTAC | 3 cut(s) | 165, 774, 1945 |
| SacII | CCGCGG | 1 cut(s) | 305 |
| SapI | GCTCTTC | 2 cut(s) | 71, 1404 |
| SaqAI | TTAA | 5 cut(s) | 246, 956, 1428, 1824, 2257 |
| Sau3AI | GATC | 8 cut(s) | 286, 314, 464, 745, 844, 931, 1382, 1553 |
| Sau96I | GGNCC | 7 cut(s) | 1060, 1082, 1786, 1795, 1838, 1939, 2075 |
| ScaI | AGTACT | 1 cut(s) | 775 |
| SchI | GAGTC | 6 cut(s) | 628, 632, 986, 1045, 1076, 2201 |
| ScrFI | CCNGG | 4 cut(s) | 1064, 1098, 1183, 2145 |
| SduI | GDGCHC | 2 cut(s) | 160, 2224 |
| SfaNI | GCATC | 6 cut(s) | 356, 405, 550, 589, 1180, 1720 |
| SfcI | CTRYAG | 4 cut(s) | 1802, 1971, 2231, 2242 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 1793 |
| Sfr274I | CTCGAG | 1 cut(s) | 12 |
| Sfr303I | CCGCGG | 1 cut(s) | 305 |
| SgrBI | CCGCGG | 1 cut(s) | 305 |
| SinI | GGWCC | 4 cut(s) | 1060, 1082, 1838, 2075 |
| SlaI | CTCGAG | 1 cut(s) | 12 |
| SmlI | CTYRAG | 3 cut(s) | 12, 1508, 1842 |
| SmoI | CTYRAG | 3 cut(s) | 12, 1508, 1842 |
| Sse9I | AATT | 8 cut(s) | 149, 364, 578, 678, 791, 809, 984, 1173 |
| SseBI | AGGCCT | 1 cut(s) | 704 |
| SsiI | CCGC | 7 cut(s) | 139, 302, 304, 1179, 1194, 1784, 2028 |
| SspI | AATATT | 1 cut(s) | 1414 |
| SspMI | CTAG | 6 cut(s) | 717, 1128, 1449, 1467, 1650, 2069 |
| StuI | AGGCCT | 1 cut(s) | 704 |
| StyD4I | CCNGG | 4 cut(s) | 1062, 1096, 1181, 2143 |
| StyI | CCWWGG | 2 cut(s) | 1029, 1120 |
| TaaI | ACNGT | 6 cut(s) | 419, 481, 546, 575, 803, 2094 |
| TaiI | ACGT | 2 cut(s) | 21, 28 |
| TaqI | TCGA | 4 cut(s) | 13, 128, 176, 399 |
| TasI | AATT | 8 cut(s) | 149, 364, 578, 678, 791, 809, 984, 1173 |
| TatI | WGTACW | 2 cut(s) | 773, 1944 |
| TauI | GCSGC | 4 cut(s) | 142, 1196, 1787, 2031 |
| TfiI | GAWTC | 8 cut(s) | 341, 401, 590, 755, 830, 1315, 2020, 2205 |
| Tru1I | TTAA | 5 cut(s) | 246, 956, 1428, 1824, 2257 |
| Tru9I | TTAA | 5 cut(s) | 246, 956, 1428, 1824, 2257 |
| TscAI | CASTG | 6 cut(s) | 592, 1017, 1959, 2097, 2229, 2235 |
| TspDTI | ATGAA | 6 cut(s) | 338, 903, 1377, 1392, 1503, 2121 |
| TspGWI | ACGGA | 1 cut(s) | 2198 |
| TspRI | CASTG | 6 cut(s) | 592, 1017, 1959, 2097, 2229, 2235 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1835 |
| VneI | GTGCAC | 1 cut(s) | 2220 |
| VpaK11BI | GGWCC | 4 cut(s) | 1060, 1082, 1838, 2075 |
| XapI | RAATTY | 3 cut(s) | 364, 809, 1173 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 389 |
| XhoI | CTCGAG | 1 cut(s) | 12 |
| XmiI | GTMKAC | 2 cut(s) | 1202, 1299 |
| XspI | CTAG | 6 cut(s) | 717, 1128, 1449, 1467, 1650, 2069 |
| ZrmI | AGTACT | 1 cut(s) | 775 |