Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0015074

Physical Location & Seq

Genomic Coordinates Reverse (-)

34461351 .. 34462608

Gene Structure 1258 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G383700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 750 bp

ATGGCCATGTTCACCTCCAAGCTTAAGCTTTCTCTTCTTCTTTTTCTCTTTTCATTAGCTGCAGGCAATGTGGTCTACGCAACCGTTTTCACGCTCCAGAACCGTTGCACCTACACAGTCTGGCCCGGCACACTCTCCGGAAACGGCGCCGCAGTTCTCGGCGACGGTGGTTTCGCCTTGGCTCCGGATTCGTCCGTCCAGCTCACGGCCCCTCGGGGATGGTCAGGCCGGTTCTGGGCCCGAACCGGCTGCAACTTCGACGACTCGGGAAACGGCAAATGCCTCACCGGCGACTGCGGCTCACTAAAATGCGTCGGGGGCGGCGCACCCCCAGTGACCTTGGCGGAGTTCACGACAGGTTCGACCCCGGGTGACAAGGATTTCTATGACGTCAGCTTGGTGGACGGTTACAATGTGGCCATGGGGCTGCGGGCAAACGGAGGAACCGGCGACTGCCAGTACGCGGGATGCGTGGCCGACTTGAATGGCAACTGCCCACCGGAGCTTCGGGTGACGGATTCGGGTAAGGTGGTGGCGTGCAGGAGCGCGTGCGCGGCGTTTAACGCGCCGGAGTTTTGCTGCACCGGGGACCACGCGACGCCTCAGACCTGTTCCCCCACTCAGTACTCGGTGATGTTCAAGACTGCATGCCCCACAGCGTATAGTTACGCTTATGATGACGCTTCCAGCACTTGTACCTGTGCCGGGTCGGACTACTTGATTACGTTTTGCCCAACCGGGTCATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009607 GO:0009615 GO:0009627 GO:0009628 GO:0009814 GO:0009889 GO:0009962 GO:0010035 GO:0010038 GO:0010224 GO:0019222 GO:0030312 GO:0031537 GO:0031540 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0046686 GO:0048046 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0065007 GO:0071944 GO:0080090 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Thaumatin

Protein Analysis

250

Amino Acids

25.75

Weight (kDa)

4.7

Isoelectric Point (pI)

33.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015074)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19320 AT1G75030 AT1G75040 AT1G75050
fragaria_vesca	FvH4_2g40300
malus_domestica	MD08G1036400.v1.1
prunus_persica	Prupe.1G383700_v2.0.a1
pyrus_communis	pycom08g02910
rosa_chinensis	RchiOBHm_Chr6g0300441
rosa_laevigata	RLG00000011337
rosa_multiflora	Rmu_co8384655.1_g000001 Rmu_sc0001670.1_g000005
rosa_roxburghii	Rroxscaffold_7G00167780
rosa_rugosa	Rorug06G0296100
rosa_samantha	Rh6DG409100
rosa_wichuraiana	Rw6G035760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	393
AccB1I	GGYRCC	1 cut(s)	146
AccI	GTMKAC	1 cut(s)	75
AccII	CGCG	5 cut(s)	464, 548, 554, 566, 596
AccIII	TCCGGA	2 cut(s)	137, 184
AciI	CCGC	7 cut(s)	150, 297, 321, 344, 430, 464, 554
AcoI	YGGCCR	3 cut(s)	3, 417, 474
AcyI	GRCGYC	3 cut(s)	147, 390, 599
AfaI	GTAC	3 cut(s)	461, 626, 697
AfiI	CCNNNNNNNGG	4 cut(s)	205, 235, 463, 705
AflII	CTTAAG	1 cut(s)	23
AgsI	TTSAA	2 cut(s)	484, 640
AluBI	AGCT	6 cut(s)	22, 28, 59, 202, 396, 505
AluI	AGCT	6 cut(s)	22, 28, 59, 202, 396, 505
Ama87I	CYCGRG	3 cut(s)	213, 265, 367
Aor13HI	TCCGGA	2 cut(s)	137, 184
AoxI	GGCC	7 cut(s)	3, 122, 207, 226, 237, 417, 474
ApaI	GGGCCC	1 cut(s)	241
ApeKI	GCWGC	4 cut(s)	59, 249, 427, 579
ArsI	GACNNNNNNTTYG	2 cut(s)	155, 187
AspLEI	GCGC	5 cut(s)	149, 326, 548, 554, 568
AspS9I	GGNCC	5 cut(s)	123, 208, 237, 238, 589
AsuC2I	CCSGG	6 cut(s)	126, 368, 369, 586, 706, 739
AsuHPI	GGTGA	5 cut(s)	4, 277, 383, 523, 643
AvaI	CYCGRG	3 cut(s)	213, 265, 367
AvaII	GGWCC	1 cut(s)	589
BaeGI	GKGCMC	1 cut(s)	241
BalI	TGGCCA	2 cut(s)	5, 419
BanI	GGYRCC	1 cut(s)	146
BanII	GRGCYC	1 cut(s)	241
BbvI	GCAGC	4 cut(s)	46, 236, 414, 566
BccI	CCATC	1 cut(s)	213
BceAI	ACGGC	3 cut(s)	160, 222, 289
BcgI	CGANNNNNNTGC	2 cut(s)	231, 265
BcnI	CCSGG	6 cut(s)	126, 368, 369, 586, 706, 739
BfmI	CTRYAG	1 cut(s)	60
BfoI	RGCGCY	1 cut(s)	150
BfrI	CTTAAG	1 cut(s)	23
BglI	GCCNNNNNGGC	1 cut(s)	288
BisI	GCNGC	8 cut(s)	60, 150, 250, 298, 322, 428, 555, 580
BlsI	GCNGC	8 cut(s)	61, 151, 251, 299, 323, 429, 556, 581
BmcAI	AGTACT	1 cut(s)	626
Bme1390I	CCNGG	6 cut(s)	126, 368, 369, 586, 706, 739
Bme18I	GGWCC	1 cut(s)	589
BmeT110I	CYCGRG	3 cut(s)	213, 265, 367
BmgT120I	GGNCC	5 cut(s)	123, 208, 237, 238, 589
BmiI	GGNNCC	6 cut(s)	148, 183, 210, 239, 445, 590
BmrFI	CCNGG	6 cut(s)	126, 368, 369, 586, 706, 739
BmrI	ACTGGG	1 cut(s)	326
BmsI	GCATC	1 cut(s)	458
BmuI	ACTGGG	1 cut(s)	326
BpmI	CTGGAG	1 cut(s)	80
BpuMI	CCSGG	6 cut(s)	126, 368, 369, 586, 706, 739
BsaHI	GRCGYC	3 cut(s)	147, 390, 599
BsaJI	CCNNGG	7 cut(s)	177, 212, 339, 366, 367, 420, 585
BsaWI	WCCGGW	3 cut(s)	137, 184, 499
Bsc4I	CCNNNNNNNGG	4 cut(s)	205, 235, 463, 705
Bse118I	RCCGGY	4 cut(s)	228, 245, 287, 446
Bse1I	ACTGG	2 cut(s)	332, 457
Bse3DI	GCAATG	1 cut(s)	73
BseAI	TCCGGA	2 cut(s)	137, 184
BseDI	CCNNGG	7 cut(s)	177, 212, 339, 366, 367, 420, 585
BseGI	GGATG	2 cut(s)	224, 473
BseLI	CCNNNNNNNGG	4 cut(s)	205, 235, 463, 705
BseMI	GCAATG	1 cut(s)	73
BseMII	CTCAG	2 cut(s)	617, 635
BseNI	ACTGG	2 cut(s)	332, 457
BseSI	GKGCMC	1 cut(s)	241
BseXI	GCAGC	4 cut(s)	46, 236, 414, 566
BsgI	GTGCAG	2 cut(s)	559, 565
Bsh1236I	CGCG	5 cut(s)	464, 548, 554, 566, 596
BshFI	GGCC	7 cut(s)	5, 124, 209, 228, 239, 419, 476
BshNI	GGYRCC	1 cut(s)	146
BsiHKCI	CYCGRG	3 cut(s)	213, 265, 367
BslFI	GGGAC	1 cut(s)	602
BslI	CCNNNNNNNGG	4 cut(s)	205, 235, 463, 705
BsmFI	GGGAC	1 cut(s)	602
BsnI	GGCC	7 cut(s)	5, 124, 209, 228, 239, 419, 476
BsoBI	CYCGRG	3 cut(s)	213, 265, 367
Bsp120I	GGGCCC	1 cut(s)	237
Bsp1286I	GDGCHC	1 cut(s)	241
Bsp13I	TCCGGA	2 cut(s)	137, 184
Bsp19I	CCATGG	1 cut(s)	420
BspACI	CCGC	7 cut(s)	150, 297, 321, 344, 430, 464, 554
BspANI	GGCC	7 cut(s)	5, 124, 209, 228, 239, 419, 476
BspCNI	CTCAG	2 cut(s)	616, 634
BspEI	TCCGGA	2 cut(s)	137, 184
BspFNI	CGCG	5 cut(s)	464, 548, 554, 566, 596
BspLI	GGNNCC	6 cut(s)	148, 183, 210, 239, 445, 590
BspMAI	CTGCAG	1 cut(s)	64
BspT107I	GGYRCC	1 cut(s)	146
BspTI	CTTAAG	1 cut(s)	23
BsrDI	GCAATG	1 cut(s)	73
BsrFI	RCCGGY	4 cut(s)	228, 245, 287, 446
BsrI	ACTGG	2 cut(s)	332, 457
BssAI	RCCGGY	4 cut(s)	228, 245, 287, 446
BssECI	CCNNGG	7 cut(s)	177, 212, 339, 366, 367, 420, 585
BssNI	GRCGYC	3 cut(s)	147, 390, 599
BssT1I	CCWWGG	3 cut(s)	177, 339, 420
Bst4CI	ACNGT	5 cut(s)	85, 104, 118, 167, 407
Bst6I	CTCTTC	1 cut(s)	39
BstACI	GRCGYC	3 cut(s)	147, 390, 599
BstAFI	CTTAAG	1 cut(s)	23
BstC8I	GCNNGC	5 cut(s)	64, 432, 538, 550, 649
BstDEI	CTNAG	2 cut(s)	603, 621
BstDSI	CCRYGG	1 cut(s)	420
BstF5I	GGATG	2 cut(s)	224, 473
BstFNI	CGCG	5 cut(s)	464, 548, 554, 566, 596
BstH2I	RGCGCY	1 cut(s)	150
BstHHI	GCGC	5 cut(s)	149, 326, 548, 554, 568
BstMWI	GCNNNNNNNGC	5 cut(s)	288, 297, 318, 554, 563
BstNSI	RCATGY	1 cut(s)	651
BstSCI	CCNGG	6 cut(s)	124, 366, 367, 584, 704, 737
BstSFI	CTRYAG	1 cut(s)	60
BstSLI	GKGCMC	1 cut(s)	241
BstUI	CGCG	5 cut(s)	464, 548, 554, 566, 596
BstV1I	GCAGC	4 cut(s)	46, 236, 414, 566
BsuRI	GGCC	7 cut(s)	5, 124, 209, 228, 239, 419, 476
BtgI	CCRYGG	1 cut(s)	420
BtsCI	GGATG	2 cut(s)	224, 473
BtsIMutI	CAGTG	1 cut(s)	339
Cac8I	GCNNGC	5 cut(s)	64, 432, 538, 550, 649
CfoI	GCGC	5 cut(s)	149, 326, 548, 554, 568
Cfr10I	RCCGGY	4 cut(s)	228, 245, 287, 446
Cfr13I	GGNCC	5 cut(s)	123, 208, 237, 238, 589
Cfr9I	CCCGGG	1 cut(s)	367
CseI	GACGC	3 cut(s)	301, 607, 689
Csp6I	GTAC	3 cut(s)	460, 625, 696
CviAII	CATG	3 cut(s)	7, 421, 648
CviQI	GTAC	3 cut(s)	460, 625, 696
DdeI	CTNAG	2 cut(s)	603, 621
DinI	GGCGCC	1 cut(s)	148
EaeI	YGGCCR	3 cut(s)	3, 417, 474
Eam1104I	CTCTTC	1 cut(s)	39
EarI	CTCTTC	1 cut(s)	39
EciI	GGCGGA	1 cut(s)	359
Eco130I	CCWWGG	3 cut(s)	177, 339, 420
Eco24I	GRGCYC	1 cut(s)	241
Eco47I	GGWCC	1 cut(s)	589
Eco88I	CYCGRG	3 cut(s)	213, 265, 367
EcoT14I	CCWWGG	3 cut(s)	177, 339, 420
EcoT38I	GRGCYC	1 cut(s)	241
EgeI	GGCGCC	1 cut(s)	148
EheI	GGCGCC	1 cut(s)	148
ErhI	CCWWGG	3 cut(s)	177, 339, 420
FaeI	CATG	3 cut(s)	10, 424, 651
FaiI	YATR	7 cut(s)	8, 387, 422, 649, 663, 675, 748
FaqI	GGGAC	1 cut(s)	602
FatI	CATG	3 cut(s)	6, 420, 647
FauI	CCCGC	2 cut(s)	423, 457
FblI	GTMKAC	1 cut(s)	75
Fnu4HI	GCNGC	8 cut(s)	60, 150, 250, 298, 322, 428, 555, 580
FokI	GGATG	2 cut(s)	231, 480
FriOI	GRGCYC	1 cut(s)	241
Fsp4HI	GCNGC	8 cut(s)	60, 150, 250, 298, 322, 428, 555, 580
GlaI	GCGC	5 cut(s)	148, 325, 547, 553, 567
GluI	GCNGC	8 cut(s)	60, 150, 250, 298, 322, 428, 555, 580
GsuI	CTGGAG	1 cut(s)	80
HaeII	RGCGCY	1 cut(s)	150
HaeIII	GGCC	7 cut(s)	5, 124, 209, 228, 239, 419, 476
HgaI	GACGC	3 cut(s)	301, 607, 689
HhaI	GCGC	5 cut(s)	149, 326, 548, 554, 568
Hin1I	GRCGYC	3 cut(s)	147, 390, 599
Hin1II	CATG	3 cut(s)	10, 424, 651
Hin6I	GCGC	5 cut(s)	147, 324, 546, 552, 566
HinP1I	GCGC	5 cut(s)	147, 324, 546, 552, 566
HindIII	AAGCTT	2 cut(s)	20, 26
HinfI	GANTC	3 cut(s)	188, 263, 518
HphI	GGTGA	5 cut(s)	4, 277, 383, 523, 643
Hpy166II	GTNNAC	4 cut(s)	12, 76, 351, 403
Hpy188I	TCNGA	2 cut(s)	606, 712
Hpy188III	TCNNGA	6 cut(s)	97, 138, 185, 267, 352, 640
Hpy8I	GTNNAC	4 cut(s)	12, 76, 351, 403
Hpy99I	CGWCG	4 cut(s)	167, 263, 317, 601
HpyCH4III	ACNGT	5 cut(s)	85, 104, 118, 167, 407
HpyCH4IV	ACGT	2 cut(s)	390, 725
HpyCH4V	TGCA	6 cut(s)	62, 108, 252, 540, 582, 647
HpyF10VI	GCNNNNNNNGC	5 cut(s)	288, 297, 318, 554, 563
HpyF3I	CTNAG	2 cut(s)	603, 621
HpySE526I	ACGT	2 cut(s)	390, 725
Hsp92I	GRCGYC	3 cut(s)	147, 390, 599
Hsp92II	CATG	3 cut(s)	10, 424, 651
HspAI	GCGC	5 cut(s)	147, 324, 546, 552, 566
KasI	GGCGCC	1 cut(s)	146
Kpn2I	TCCGGA	2 cut(s)	137, 184
LmnI	GCTCC	4 cut(s)	99, 187, 502, 543
Lsp1109I	GCAGC	4 cut(s)	46, 236, 414, 566
LweI	GCATC	1 cut(s)	458
MaeII	ACGT	2 cut(s)	390, 725
MaeIII	GTNAC	5 cut(s)	334, 371, 407, 511, 665
MboII	GAAGA	2 cut(s)	26, 29
MhlI	GDGCHC	1 cut(s)	241
MlsI	TGGCCA	2 cut(s)	5, 419
MluNI	TGGCCA	2 cut(s)	5, 419
Mly113I	GGCGCC	1 cut(s)	147
MlyI	GAGTC	1 cut(s)	257
MmeI	TCCRAC	1 cut(s)	690
MnlI	CCTC	5 cut(s)	25, 222, 293, 434, 612
Mox20I	TGGCCA	2 cut(s)	5, 419
MroI	TCCGGA	2 cut(s)	137, 184
MscI	TGGCCA	2 cut(s)	5, 419
MseI	TTAA	2 cut(s)	24, 561
MslI	CAYNNNNRTG	1 cut(s)	307
Msp20I	TGGCCA	2 cut(s)	5, 419
MspCI	CTTAAG	1 cut(s)	23
MspR9I	CCNGG	6 cut(s)	126, 368, 369, 586, 706, 739
MvnI	CGCG	5 cut(s)	464, 548, 554, 566, 596
MwoI	GCNNNNNNNGC	5 cut(s)	288, 297, 318, 554, 563
NarI	GGCGCC	1 cut(s)	147
NciI	CCSGG	6 cut(s)	126, 368, 369, 586, 706, 739
NcoI	CCATGG	1 cut(s)	420
NlaIII	CATG	3 cut(s)	10, 424, 651
NlaIV	GGNNCC	6 cut(s)	148, 183, 210, 239, 445, 590
NmeAIII	GCCGAG	1 cut(s)	138
NmuCI	GTSAC	3 cut(s)	334, 371, 511
NspI	RCATGY	1 cut(s)	651
PaeI	GCATGC	1 cut(s)	651
PcsI	WCGNNNNNNNCGW	2 cut(s)	359, 468
PfeI	GAWTC	2 cut(s)	188, 518
PkrI	GCNGC	8 cut(s)	61, 151, 251, 299, 323, 429, 556, 581
PleI	GAGTC	1 cut(s)	257
PluTI	GGCGCC	1 cut(s)	150
PpsI	GAGTC	1 cut(s)	257
PspN4I	GGNNCC	6 cut(s)	148, 183, 210, 239, 445, 590
PspOMI	GGGCCC	1 cut(s)	237
PspPI	GGNCC	5 cut(s)	123, 208, 237, 238, 589
PstI	CTGCAG	1 cut(s)	64
RsaI	GTAC	3 cut(s)	461, 626, 697
RsaNI	GTAC	3 cut(s)	460, 625, 696
RseI	CAYNNNNRTG	1 cut(s)	307
SaqAI	TTAA	2 cut(s)	24, 561
SatI	GCNGC	8 cut(s)	60, 150, 250, 298, 322, 428, 555, 580
Sau96I	GGNCC	5 cut(s)	123, 208, 237, 238, 589
ScaI	AGTACT	1 cut(s)	626
SchI	GAGTC	1 cut(s)	257
ScrFI	CCNGG	6 cut(s)	126, 368, 369, 586, 706, 739
SduI	GDGCHC	1 cut(s)	241
SfaNI	GCATC	1 cut(s)	458
SfcI	CTRYAG	1 cut(s)	60
SfoI	GGCGCC	1 cut(s)	148
SgrAI	CRCCGGYG	1 cut(s)	287
SinI	GGWCC	1 cut(s)	589
SmaI	CCCGGG	1 cut(s)	369
SmiMI	CAYNNNNRTG	1 cut(s)	307
SmlI	CTYRAG	1 cut(s)	23
SmoI	CTYRAG	1 cut(s)	23
SphI	GCATGC	1 cut(s)	651
SsiI	CCGC	7 cut(s)	150, 297, 321, 344, 430, 464, 554
SspDI	GGCGCC	1 cut(s)	146
StyD4I	CCNGG	6 cut(s)	124, 366, 367, 584, 704, 737
StyI	CCWWGG	3 cut(s)	177, 339, 420
TaaI	ACNGT	5 cut(s)	85, 104, 118, 167, 407
TaiI	ACGT	2 cut(s)	393, 728
TaqI	TCGA	2 cut(s)	258, 362
TatI	WGTACW	1 cut(s)	624
TauI	GCSGC	4 cut(s)	152, 300, 324, 557
TfiI	GAWTC	2 cut(s)	188, 518
Tru1I	TTAA	2 cut(s)	24, 561
Tru9I	TTAA	2 cut(s)	24, 561
TscAI	CASTG	1 cut(s)	339
TseFI	GTSAC	3 cut(s)	334, 371, 511
TseI	GCWGC	4 cut(s)	59, 249, 427, 579
Tsp45I	GTSAC	3 cut(s)	334, 371, 511
TspDTI	ATGAA	1 cut(s)	42
TspGWI	ACGGA	3 cut(s)	184, 453, 530
TspMI	CCCGGG	1 cut(s)	367
TspRI	CASTG	1 cut(s)	339
Vha464I	CTTAAG	1 cut(s)	23
VpaK11BI	GGWCC	1 cut(s)	589
XceI	RCATGY	1 cut(s)	651
XmaI	CCCGGG	1 cut(s)	367
XmiI	GTMKAC	1 cut(s)	75
ZraI	GACGTC	1 cut(s)	391
ZrmI	AGTACT	1 cut(s)	626

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.