Belongs to the BolA IbaG family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G17560 AT5G17560 AT5G17560 |
| fragaria_vesca | FvH4_4g10840 FvH4_4g10840 |
| malus_domestica | MD08G1049500.v1.1 MD15G1045100.v1.1 |
| prunus_persica | Prupe.1G398900_v2.0.a1 |
| pyrus_communis | pycom08g04140 pycom15g04190 pycom15g04220 |
| rosa_chinensis | RchiOBHm_Chr4g0406641 |
| rosa_laevigata | RLG00000008763 |
| rosa_multiflora | Rmu_co8238271.1_g000001 Rmu_sc0002774.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00351480 |
| rosa_rugosa | Rorug04G0072600 Rorug04G0072600 |
| rosa_samantha | Rh4AG139800 Rh4BG136800 Rh4CG147000 Rh4DG134000 |
| rosa_wichuraiana | Rw4G011390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 324, 397 |
| AfaI | GTAC | 1 cut(s) | 407 |
| AflIII | ACRYGT | 1 cut(s) | 33 |
| AgsI | TTSAA | 2 cut(s) | 226, 431 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 83, 115, 466, 498 |
| AluBI | AGCT | 1 cut(s) | 289 |
| AluI | AGCT | 1 cut(s) | 289 |
| Alw21I | GWGCWC | 1 cut(s) | 64 |
| Alw26I | GTCTC | 1 cut(s) | 104 |
| Ama87I | CYCGRG | 1 cut(s) | 210 |
| ApeKI | GCWGC | 3 cut(s) | 5, 147, 394 |
| AsuHPI | GGTGA | 1 cut(s) | 142 |
| AsuNHI | GCTAGC | 1 cut(s) | 320 |
| AvaI | CYCGRG | 1 cut(s) | 210 |
| Bbv12I | GWGCWC | 1 cut(s) | 64 |
| BbvCI | CCTCAGC | 1 cut(s) | 46 |
| BbvI | GCAGC | 3 cut(s) | 17, 159, 406 |
| BccI | CCATC | 3 cut(s) | 13, 323, 394 |
| BclI | TGATCA | 1 cut(s) | 451 |
| BcoDI | GTCTC | 1 cut(s) | 104 |
| BfaI | CTAG | 1 cut(s) | 321 |
| BisI | GCNGC | 3 cut(s) | 6, 148, 395 |
| BlsI | GCNGC | 3 cut(s) | 7, 149, 396 |
| BmeT110I | CYCGRG | 1 cut(s) | 210 |
| BmsI | GCATC | 2 cut(s) | 129, 307 |
| BmtI | GCTAGC | 1 cut(s) | 324 |
| Bpu10I | CCTNAGC | 1 cut(s) | 46 |
| BsaAI | YACGTR | 1 cut(s) | 34 |
| BsaJI | CCNNGG | 1 cut(s) | 264 |
| Bse3DI | GCAATG | 1 cut(s) | 157 |
| BseDI | CCNNGG | 1 cut(s) | 264 |
| BseGI | GGATG | 3 cut(s) | 334, 362, 405 |
| BseMI | GCAATG | 1 cut(s) | 157 |
| BseMII | CTCAG | 3 cut(s) | 60, 77, 161 |
| BseRI | GAGGAG | 2 cut(s) | 211, 477 |
| BseXI | GCAGC | 3 cut(s) | 17, 159, 406 |
| BsiHKAI | GWGCWC | 1 cut(s) | 64 |
| BsiHKCI | CYCGRG | 1 cut(s) | 210 |
| BslFI | GGGAC | 1 cut(s) | 387 |
| BsmAI | GTCTC | 1 cut(s) | 104 |
| BsmFI | GGGAC | 1 cut(s) | 387 |
| BsoBI | CYCGRG | 1 cut(s) | 210 |
| Bsp1286I | GDGCHC | 1 cut(s) | 64 |
| Bsp1407I | TGTACA | 1 cut(s) | 405 |
| Bsp143I | GATC | 1 cut(s) | 451 |
| Bsp19I | CCATGG | 1 cut(s) | 264 |
| BspACI | CCGC | 2 cut(s) | 324, 397 |
| BspCNI | CTCAG | 3 cut(s) | 59, 78, 162 |
| BspOI | GCTAGC | 1 cut(s) | 324 |
| BsrDI | GCAATG | 1 cut(s) | 157 |
| BsrGI | TGTACA | 1 cut(s) | 405 |
| BssECI | CCNNGG | 1 cut(s) | 264 |
| BssMI | GATC | 1 cut(s) | 451 |
| BssT1I | CCWWGG | 1 cut(s) | 264 |
| Bst4CI | ACNGT | 2 cut(s) | 99, 439 |
| Bst6I | CTCTTC | 1 cut(s) | 364 |
| BstAUI | TGTACA | 1 cut(s) | 405 |
| BstBAI | YACGTR | 1 cut(s) | 34 |
| BstC8I | GCNNGC | 3 cut(s) | 235, 322, 444 |
| BstDEI | CTNAG | 5 cut(s) | 46, 53, 86, 170, 489 |
| BstDSI | CCRYGG | 1 cut(s) | 264 |
| BstF5I | GGATG | 3 cut(s) | 334, 362, 405 |
| BstKTI | GATC | 1 cut(s) | 454 |
| BstMAI | GTCTC | 1 cut(s) | 104 |
| BstMBI | GATC | 1 cut(s) | 451 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 144 |
| BstNSI | RCATGY | 2 cut(s) | 341, 446 |
| BstV1I | GCAGC | 3 cut(s) | 17, 159, 406 |
| BtgI | CCRYGG | 1 cut(s) | 264 |
| BtsCI | GGATG | 3 cut(s) | 334, 362, 405 |
| BtsI | GCAGTG | 1 cut(s) | 204 |
| BtsIMutI | CAGTG | 2 cut(s) | 204, 444 |
| Cac8I | GCNNGC | 3 cut(s) | 235, 322, 444 |
| CseI | GACGC | 1 cut(s) | 14 |
| Csp6I | GTAC | 1 cut(s) | 406 |
| CviAII | CATG | 4 cut(s) | 256, 265, 338, 443 |
| CviJI | RGCY | 6 cut(s) | 8, 44, 215, 289, 383, 413 |
| CviKI_1 | RGCY | 6 cut(s) | 8, 44, 215, 289, 383, 413 |
| CviQI | GTAC | 1 cut(s) | 406 |
| DdeI | CTNAG | 5 cut(s) | 46, 53, 86, 170, 489 |
| DpnI | GATC | 1 cut(s) | 453 |
| DpnII | GATC | 1 cut(s) | 451 |
| Eam1104I | CTCTTC | 1 cut(s) | 364 |
| EarI | CTCTTC | 1 cut(s) | 364 |
| Eco130I | CCWWGG | 1 cut(s) | 264 |
| Eco88I | CYCGRG | 1 cut(s) | 210 |
| EcoT14I | CCWWGG | 1 cut(s) | 264 |
| ErhI | CCWWGG | 1 cut(s) | 264 |
| FaeI | CATG | 4 cut(s) | 259, 268, 341, 446 |
| FaiI | YATR | 8 cut(s) | 70, 186, 257, 266, 339, 416, 418, 444 |
| FaqI | GGGAC | 1 cut(s) | 387 |
| FatI | CATG | 4 cut(s) | 255, 264, 337, 442 |
| FauI | CCCGC | 1 cut(s) | 317 |
| FauNDI | CATATG | 1 cut(s) | 416 |
| FbaI | TGATCA | 1 cut(s) | 451 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 148, 395 |
| FokI | GGATG | 3 cut(s) | 341, 349, 412 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 148, 395 |
| FspBI | CTAG | 1 cut(s) | 321 |
| GluI | GCNGC | 3 cut(s) | 6, 148, 395 |
| HgaI | GACGC | 1 cut(s) | 14 |
| Hin1II | CATG | 4 cut(s) | 259, 268, 341, 446 |
| HinfI | GANTC | 4 cut(s) | 112, 201, 245, 299 |
| HphI | GGTGA | 1 cut(s) | 142 |
| Hpy166II | GTNNAC | 1 cut(s) | 406 |
| Hpy188I | TCNGA | 4 cut(s) | 125, 171, 456, 492 |
| Hpy8I | GTNNAC | 1 cut(s) | 406 |
| HpyCH4III | ACNGT | 2 cut(s) | 99, 439 |
| HpyCH4IV | ACGT | 2 cut(s) | 33, 157 |
| HpyCH4V | TGCA | 3 cut(s) | 259, 442, 446 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 144 |
| HpyF3I | CTNAG | 5 cut(s) | 46, 53, 86, 170, 489 |
| HpySE526I | ACGT | 2 cut(s) | 33, 157 |
| Hsp92II | CATG | 4 cut(s) | 259, 268, 341, 446 |
| Ksp22I | TGATCA | 1 cut(s) | 451 |
| Kzo9I | GATC | 1 cut(s) | 451 |
| LmnI | GCTCC | 1 cut(s) | 178 |
| LpnPI | CCDG | 2 cut(s) | 66, 219 |
| Lsp1109I | GCAGC | 3 cut(s) | 17, 159, 406 |
| LweI | GCATC | 2 cut(s) | 129, 307 |
| MaeI | CTAG | 1 cut(s) | 321 |
| MaeII | ACGT | 2 cut(s) | 33, 157 |
| MalI | GATC | 1 cut(s) | 453 |
| MboI | GATC | 1 cut(s) | 451 |
| MboII | GAAGA | 1 cut(s) | 351 |
| MhlI | GDGCHC | 1 cut(s) | 64 |
| MlyI | GAGTC | 2 cut(s) | 106, 239 |
| MnlI | CCTC | 7 cut(s) | 55, 81, 189, 263, 364, 415, 498 |
| MspA1I | CMGCKG | 1 cut(s) | 397 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 144 |
| NcoI | CCATGG | 1 cut(s) | 264 |
| NdeI | CATATG | 1 cut(s) | 416 |
| NdeII | GATC | 1 cut(s) | 451 |
| NheI | GCTAGC | 1 cut(s) | 320 |
| NlaIII | CATG | 4 cut(s) | 259, 268, 341, 446 |
| NspI | RCATGY | 2 cut(s) | 341, 446 |
| PaeI | GCATGC | 1 cut(s) | 446 |
| PaeR7I | CTCGAG | 1 cut(s) | 210 |
| PfeI | GAWTC | 2 cut(s) | 201, 299 |
| PkrI | GCNGC | 3 cut(s) | 7, 149, 396 |
| PleI | GAGTC | 2 cut(s) | 106, 239 |
| PpsI | GAGTC | 2 cut(s) | 106, 239 |
| Ppu21I | YACGTR | 1 cut(s) | 34 |
| PspXI | VCTCGAGB | 1 cut(s) | 210 |
| RsaI | GTAC | 1 cut(s) | 407 |
| RsaNI | GTAC | 1 cut(s) | 406 |
| SatI | GCNGC | 3 cut(s) | 6, 148, 395 |
| Sau3AI | GATC | 1 cut(s) | 451 |
| SchI | GAGTC | 2 cut(s) | 106, 239 |
| SduI | GDGCHC | 1 cut(s) | 64 |
| SetI | ASST | 3 cut(s) | 36, 160, 291 |
| SfaNI | GCATC | 2 cut(s) | 129, 307 |
| Sfr274I | CTCGAG | 1 cut(s) | 210 |
| SlaI | CTCGAG | 1 cut(s) | 210 |
| SmlI | CTYRAG | 1 cut(s) | 210 |
| SmoI | CTYRAG | 1 cut(s) | 210 |
| SphI | GCATGC | 1 cut(s) | 446 |
| SsiI | CCGC | 2 cut(s) | 324, 397 |
| SspMI | CTAG | 1 cut(s) | 321 |
| StyI | CCWWGG | 1 cut(s) | 264 |
| TaaI | ACNGT | 2 cut(s) | 99, 439 |
| TaiI | ACGT | 2 cut(s) | 36, 160 |
| TaqI | TCGA | 2 cut(s) | 211, 243 |
| TatI | WGTACW | 1 cut(s) | 405 |
| TfiI | GAWTC | 2 cut(s) | 201, 299 |
| TscAI | CASTG | 2 cut(s) | 211, 444 |
| TseI | GCWGC | 3 cut(s) | 5, 147, 394 |
| TspDTI | ATGAA | 2 cut(s) | 168, 351 |
| TspRI | CASTG | 2 cut(s) | 211, 444 |
| XceI | RCATGY | 2 cut(s) | 341, 446 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 16 |
| XhoI | CTCGAG | 1 cut(s) | 210 |
| XspI | CTAG | 1 cut(s) | 321 |