Prupe.1G483100_v2.0.a1

glycosyltransferase At5g11130

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0013814
Physical Location & Seq
Reverse (-)
40284756 .. 40287917
3162 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G483100.1

Sequence Viewer

Length: 1359 bp
ATGGCTGGCTCTGGTTGCACCCAAACTTGTTTGATATACCCTTCTCTTTTTCTCATCCTCGTCTTCTCTTTCGTAAACCCCCATTTCCACTTTTTTCCATTTCCATACAAGTCCAACGACTGCAACAACGATCTCTACAATGCCACCAGAAATAGTGCCACTCATAATATGCCTCCTATGCAAGTGAGGAAGAACGTTAACCAATTTGAGAAAATGGAAGATGGGTTGGCTAGAGCAAGAGCTGCAATACGAGAAGCTGCTCGATCAAGAAGCTACACATCGTACAAAAAGGAGGCCTTTGTTCCCAGAGGATCGGTTTACATCAACCCTTATTCCTTTCATCAGAGCCACATAGAGATGGAGAAGAGATTTCGAATTTGGACATACAAAGAAGGAGAGCCACCACTCTTCCAAGAGGGGCCAATGAACGACATATACTCCATTGAAGGACAATTCATGGACGAGTTGAGCGGAGAGAGCCCATTTTCTGCAAAAGACCCCGATGAGGCCCTCGCATTCTTTCTTCCCGTCAGTGTCGTCAACATTGTGAGATATGTCTACAGGCCTTACACCACCTACTCTCGCGTCCGGCTTCAGAACGTTATTGAGGACTTCATTGGCATCGTATCGAAGAGATACCCTTATTGGAAGAGAAGCAACGGGGCTGACCATTTTTTGGTTTCTTGTCATGATTGGGCACCGGATATTTCAGCTGGCCACCCTGAGCTTTTCAAGAACTTCATTAGAGTACTCTGCAATGCCAACTCTTCAGAAGGTTTCTGGCCAGTCCGAGACGTCTCCCTGCCCGAAATCAATATCCCTTTCGGAGACTTAGGCCCTCCCCTCCTCACCCACCCCCCTAGAAACCGTTCAATATTTGCTTTTTTCGCAGGTGGCGATCACGGGAATGTAAGAAAGCTGCTATTCAGGCATTGGAAAAACAAAGACAAGGAAATCCAAGTCTATGATTACCTTCCCAAAACCCTAAACTACACACAGCTAATGGCGCAAAGCAAGTTTTGCCTGTGCCCTAGTGGGTGGGAAGTTGCGAGCCCTAGAGTGGTTGAGGCCATATACGCAGGCTGTGTCCCAGTGATTATTTCTGACTCTTATGTGCTGCCATTTAGTGATGTGCTTGACTGGTCTAAGTTTTCGGTTCACGTGCCGGTGGCTAGGATACGGGAGCTGAAGGCAATCCTGCAAACAGTTTCTGTGCATGAGTATTTGAGAAAGCAAAAGAGGGTCGTGCAAGTGCAGCGCCATTTTGTGCTCAATAGGCCTGCCAAGCCTTTTGATTTGTTGCATATGGTGATGCACTCAGTTTGGCTCAGGAGGCTTAATGTGAGGTTGCTGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

453

Amino Acids

52.42

Weight (kDa)

9.27

Isoelectric Point (pI)

51.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013814)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G11130 AT5G11130
fragaria_vesca FvH4_2g28830
malus_domestica MD08G1156800.v1.1 MD15G1127600.v1.1
prunus_persica Prupe.1G483100_v2.0.a1
pyrus_communis pycom08g12920 pycom15g11490
rosa_chinensis RchiOBHm_Chr6g0297581
rosa_laevigata RLG00000011580
rosa_multiflora Rmu_ssc0000319.1_g000008
rosa_roxburghii Rroxscaffold_7G00170340
rosa_rugosa Rorug06G0273900 Rorug06G0274000
rosa_samantha Rh6AG384800 Rh6CG398700
rosa_wichuraiana Rw6G033520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 881
AatII GACGTC 1 cut(s) 798
Acc36I ACCTGC 1 cut(s) 881
AccB1I GGYRCC 1 cut(s) 697
AccB7I CCANNNNNTGG 1 cut(s) 676
AccBSI CCGCTC 1 cut(s) 471
AccI GTMKAC 1 cut(s) 558
AccII CGCG 1 cut(s) 585
AciI CCGC 1 cut(s) 471
AclI AACGTT 2 cut(s) 195, 600
AclWI GGATC 1 cut(s) 319
AcoI YGGCCR 2 cut(s) 715, 782
AcsI RAATTY 1 cut(s) 375
AcuI CTGAAG 3 cut(s) 578, 753, 1208
AcvI CACGTG 1 cut(s) 1162
AcyI GRCGYC 1 cut(s) 795
AfaI GTAC 2 cut(s) 284, 750
AfiI CCNNNNNNNGG 3 cut(s) 505, 676, 1060
AgsI TTSAA 3 cut(s) 446, 733, 873
AluBI AGCT 8 cut(s) 242, 257, 273, 713, 727, 919, 1000, 1186
AluI AGCT 8 cut(s) 242, 257, 273, 713, 727, 919, 1000, 1186
Alw21I GWGCWC 1 cut(s) 1272
Alw26I GTCTC 3 cut(s) 786, 802, 822
AlwI GGATC 1 cut(s) 319
AlwNI CAGNNNCTG 1 cut(s) 1211
AoxI GGCC 9 cut(s) 294, 419, 507, 563, 715, 782, 835, 1068, 1277
ApeKI GCWGC 5 cut(s) 242, 257, 919, 1117, 1255
ApoI RAATTY 1 cut(s) 375
Asp700I GAANNNNTTC 1 cut(s) 868
AspLEI GCGC 2 cut(s) 1009, 1260
AspS9I GGNCC 3 cut(s) 419, 508, 836
AsuHPI GGTGA 2 cut(s) 841, 1321
AsuII TTCGAA 1 cut(s) 373
BaeGI GKGCMC 2 cut(s) 700, 1031
BalI TGGCCA 2 cut(s) 717, 784
BanI GGYRCC 1 cut(s) 697
BanII GRGCYC 2 cut(s) 482, 1055
BbrPI CACGTG 1 cut(s) 1162
BbsI GAAGAC 1 cut(s) 55
Bbv12I GWGCWC 1 cut(s) 1272
BbvCI CCTCAGC 1 cut(s) 1352
BbvI GCAGC 5 cut(s) 229, 244, 906, 1104, 1267
BccI CCATC 2 cut(s) 215, 352
BciVI GTATCC 1 cut(s) 1170
BcoDI GTCTC 3 cut(s) 786, 802, 822
BfaI CTAG 5 cut(s) 231, 861, 1032, 1056, 1173
BfmI CTRYAG 1 cut(s) 559
BfoI RGCGCY 1 cut(s) 1261
BfuAI ACCTGC 1 cut(s) 881
BfuI GTATCC 1 cut(s) 1170
BisI GCNGC 5 cut(s) 243, 258, 920, 1118, 1256
BlsI GCNGC 5 cut(s) 244, 259, 921, 1119, 1257
BmcAI AGTACT 1 cut(s) 750
BmgT120I GGNCC 3 cut(s) 419, 508, 836
BmiI GGNNCC 2 cut(s) 420, 699
BmrI ACTGGG 1 cut(s) 1085
BmsI GCATC 2 cut(s) 630, 1302
BmuI ACTGGG 1 cut(s) 1085
BpiI GAAGAC 1 cut(s) 55
Bpu10I CCTNAGC 3 cut(s) 723, 1328, 1352
Bpu14I TTCGAA 1 cut(s) 373
BsaAI YACGTR 1 cut(s) 1162
BsaHI GRCGYC 1 cut(s) 795
BsaWI WCCGGW 1 cut(s) 700
BsaXI ACNNNNNCTCC 2 cut(s) 422, 452
Bsc4I CCNNNNNNNGG 3 cut(s) 505, 676, 1060
Bse118I RCCGGY 1 cut(s) 1165
Bse1I ACTGG 3 cut(s) 785, 1091, 1145
Bse3DI GCAATG 1 cut(s) 763
BseGI GGATG 1 cut(s) 54
BseLI CCNNNNNNNGG 3 cut(s) 505, 676, 1060
BseMI GCAATG 1 cut(s) 763
BseMII CTCAG 4 cut(s) 714, 1332, 1342, 1343
BseNI ACTGG 3 cut(s) 785, 1091, 1145
BseRI GAGGAG 1 cut(s) 836
BseSI GKGCMC 2 cut(s) 700, 1031
BseXI GCAGC 5 cut(s) 229, 244, 906, 1104, 1267
BsgI GTGCAG 1 cut(s) 1274
Bsh1236I CGCG 1 cut(s) 585
BshFI GGCC 9 cut(s) 296, 421, 509, 565, 717, 784, 837, 1070, 1279
BshNI GGYRCC 1 cut(s) 697
BsiHKAI GWGCWC 1 cut(s) 1272
BsiSI CCGG 3 cut(s) 589, 701, 1166
BslFI GGGAC 1 cut(s) 1073
BslI CCNNNNNNNGG 3 cut(s) 505, 676, 1060
BsmAI GTCTC 3 cut(s) 786, 802, 822
BsmBI CGTCTC 2 cut(s) 786, 802
BsmFI GGGAC 1 cut(s) 1073
BsmI GAATGC 1 cut(s) 515
BsnI GGCC 9 cut(s) 296, 421, 509, 565, 717, 784, 837, 1070, 1279
Bsp119I TTCGAA 1 cut(s) 373
Bsp1286I GDGCHC 5 cut(s) 482, 700, 1031, 1055, 1272
Bsp143I GATC 4 cut(s) 130, 263, 311, 898
BspACI CCGC 1 cut(s) 471
BspANI GGCC 9 cut(s) 296, 421, 509, 565, 717, 784, 837, 1070, 1279
BspCNI CTCAG 4 cut(s) 715, 1331, 1341, 1344
BspFNI CGCG 1 cut(s) 585
BspHI TCATGA 1 cut(s) 688
BspLI GGNNCC 2 cut(s) 420, 699
BspMI ACCTGC 1 cut(s) 881
BspPI GGATC 1 cut(s) 319
BspT104I TTCGAA 1 cut(s) 373
BspT107I GGYRCC 1 cut(s) 697
BsrBI CCGCTC 1 cut(s) 471
BsrDI GCAATG 1 cut(s) 763
BsrFI RCCGGY 1 cut(s) 1165
BsrI ACTGG 3 cut(s) 785, 1091, 1145
BssAI RCCGGY 1 cut(s) 1165
BssMI GATC 4 cut(s) 130, 263, 311, 898
BssNI GRCGYC 1 cut(s) 795
Bst4CI ACNGT 2 cut(s) 869, 1207
Bst6I CTCTTC 5 cut(s) 359, 413, 626, 644, 772
BstACI GRCGYC 1 cut(s) 795
BstAPI GCANNNNNTGC 2 cut(s) 242, 1020
BstBAI YACGTR 1 cut(s) 1162
BstBI TTCGAA 1 cut(s) 373
BstC8I GCNNGC 5 cut(s) 7, 715, 1051, 1081, 1281
BstDEI CTNAG 6 cut(s) 723, 832, 1146, 1318, 1328, 1352
BstF5I GGATG 1 cut(s) 54
BstFNI CGCG 1 cut(s) 585
BstH2I RGCGCY 1 cut(s) 1261
BstHHI GCGC 2 cut(s) 1009, 1260
BstKTI GATC 4 cut(s) 133, 266, 314, 901
BstMAI GTCTC 3 cut(s) 786, 802, 822
BstMBI GATC 4 cut(s) 130, 263, 311, 898
BstSFI CTRYAG 1 cut(s) 559
BstSLI GKGCMC 2 cut(s) 700, 1031
BstUI CGCG 1 cut(s) 585
BstV1I GCAGC 5 cut(s) 229, 244, 906, 1104, 1267
BstV2I GAAGAC 1 cut(s) 55
BsuI GTATCC 1 cut(s) 1170
BsuRI GGCC 9 cut(s) 296, 421, 509, 565, 717, 784, 837, 1070, 1279
BtsCI GGATG 1 cut(s) 54
BtsIMutI CAGTG 2 cut(s) 538, 1098
BveI ACCTGC 1 cut(s) 881
Cac8I GCNNGC 5 cut(s) 7, 715, 1051, 1081, 1281
CaiI CAGNNNCTG 1 cut(s) 1211
CciI TCATGA 1 cut(s) 688
CfoI GCGC 2 cut(s) 1009, 1260
Cfr10I RCCGGY 1 cut(s) 1165
Cfr13I GGNCC 3 cut(s) 419, 508, 836
CseI GACGC 1 cut(s) 574
Csp6I GTAC 2 cut(s) 283, 749
CviAII CATG 3 cut(s) 457, 689, 1217
CviQI GTAC 2 cut(s) 283, 749
DdeI CTNAG 6 cut(s) 723, 832, 1146, 1318, 1328, 1352
DpnI GATC 4 cut(s) 132, 265, 313, 900
DpnII GATC 4 cut(s) 130, 263, 311, 898
EaeI YGGCCR 2 cut(s) 715, 782
Eam1104I CTCTTC 5 cut(s) 359, 413, 626, 644, 772
EarI CTCTTC 5 cut(s) 359, 413, 626, 644, 772
Eco147I AGGCCT 3 cut(s) 296, 565, 1279
Eco24I GRGCYC 2 cut(s) 482, 1055
Eco57I CTGAAG 3 cut(s) 578, 753, 1208
Eco72I CACGTG 1 cut(s) 1162
EcoO109I RGGNCCY 2 cut(s) 508, 836
EcoT38I GRGCYC 2 cut(s) 482, 1055
Esp3I CGTCTC 2 cut(s) 786, 802
FaeI CATG 3 cut(s) 460, 692, 1220
FalI AAGNNNNNCTT 2 cut(s) 281, 313
FaqI GGGAC 1 cut(s) 1073
FatI CATG 3 cut(s) 456, 688, 1216
FauNDI CATATG 1 cut(s) 1305
FblI GTMKAC 1 cut(s) 558
Fnu4HI GCNGC 5 cut(s) 243, 258, 920, 1118, 1256
FokI GGATG 1 cut(s) 41
FriOI GRGCYC 2 cut(s) 482, 1055
Fsp4HI GCNGC 5 cut(s) 243, 258, 920, 1118, 1256
FspBI CTAG 5 cut(s) 231, 861, 1032, 1056, 1173
GlaI GCGC 2 cut(s) 1008, 1259
GluI GCNGC 5 cut(s) 243, 258, 920, 1118, 1256
HaeII RGCGCY 1 cut(s) 1261
HaeIII GGCC 9 cut(s) 296, 421, 509, 565, 717, 784, 837, 1070, 1279
HapII CCGG 3 cut(s) 589, 701, 1166
HgaI GACGC 1 cut(s) 574
HhaI GCGC 2 cut(s) 1009, 1260
Hin1I GRCGYC 1 cut(s) 795
Hin1II CATG 3 cut(s) 460, 692, 1220
Hin6I GCGC 2 cut(s) 1007, 1258
HinP1I GCGC 2 cut(s) 1007, 1258
HincII GTYRAC 2 cut(s) 199, 541
HindII GTYRAC 2 cut(s) 199, 541
HinfI GANTC 1 cut(s) 1106
HpaI GTTAAC 1 cut(s) 199
HpaII CCGG 3 cut(s) 589, 701, 1166
HphI GGTGA 2 cut(s) 841, 1321
Hpy166II GTNNAC 6 cut(s) 76, 199, 319, 541, 559, 1159
Hpy188I TCNGA 6 cut(s) 345, 597, 772, 791, 827, 1105
Hpy188III TCNNGA 4 cut(s) 267, 689, 733, 1330
Hpy8I GTNNAC 6 cut(s) 76, 199, 319, 541, 559, 1159
HpyAV CCTTC 6 cut(s) 51, 386, 440, 767, 983, 1183
HpyCH4III ACNGT 2 cut(s) 869, 1207
HpyCH4IV ACGT 4 cut(s) 195, 600, 795, 1161
HpyF3I CTNAG 6 cut(s) 723, 832, 1146, 1318, 1328, 1352
HpySE526I ACGT 4 cut(s) 195, 600, 795, 1161
Hsp92I GRCGYC 1 cut(s) 795
Hsp92II CATG 3 cut(s) 460, 692, 1220
HspAI GCGC 2 cut(s) 1007, 1258
KspAI GTTAAC 1 cut(s) 199
Kzo9I GATC 4 cut(s) 130, 263, 311, 898
LmnI GCTCC 1 cut(s) 1183
Lsp1109I GCAGC 5 cut(s) 229, 244, 906, 1104, 1267
LweI GCATC 2 cut(s) 630, 1302
MaeI CTAG 5 cut(s) 231, 861, 1032, 1056, 1173
MaeII ACGT 4 cut(s) 195, 600, 795, 1161
MalI GATC 4 cut(s) 132, 265, 313, 900
MbiI CCGCTC 1 cut(s) 471
MboI GATC 4 cut(s) 130, 263, 311, 898
MboII GAAGA 9 cut(s) 55, 202, 230, 376, 400, 515, 643, 661, 759
MhlI GDGCHC 5 cut(s) 482, 700, 1031, 1055, 1272
MlsI TGGCCA 2 cut(s) 717, 784
MluCI AATT 3 cut(s) 203, 375, 452
MluNI TGGCCA 2 cut(s) 717, 784
MlyI GAGTC 1 cut(s) 1100
MmeI TCCRAC 1 cut(s) 138
Mox20I TGGCCA 2 cut(s) 717, 784
MroXI GAANNNNTTC 1 cut(s) 868
MscI TGGCCA 2 cut(s) 717, 784
MseI TTAA 2 cut(s) 198, 1338
MslI CAYNNNNRTG 2 cut(s) 356, 906
Msp20I TGGCCA 2 cut(s) 717, 784
MspA1I CMGCKG 1 cut(s) 713
MspI CCGG 3 cut(s) 589, 701, 1166
Mva1269I GAATGC 1 cut(s) 515
MvnI CGCG 1 cut(s) 585
NdeI CATATG 1 cut(s) 1305
NdeII GATC 4 cut(s) 130, 263, 311, 898
NlaIII CATG 3 cut(s) 460, 692, 1220
NlaIV GGNNCC 2 cut(s) 420, 699
NspV TTCGAA 1 cut(s) 373
PagI TCATGA 1 cut(s) 688
PaqCI CACCTGC 1 cut(s) 881
PceI AGGCCT 3 cut(s) 296, 565, 1279
PcsI WCGNNNNNNNCGW 1 cut(s) 894
PctI GAATGC 1 cut(s) 515
PdmI GAANNNNTTC 1 cut(s) 868
PflMI CCANNNNNTGG 1 cut(s) 676
PkrI GCNGC 5 cut(s) 244, 259, 921, 1119, 1257
PleI GAGTC 1 cut(s) 1100
PmaCI CACGTG 1 cut(s) 1162
PmlI CACGTG 1 cut(s) 1162
PpsI GAGTC 1 cut(s) 1100
Ppu21I YACGTR 1 cut(s) 1162
Psp1406I AACGTT 2 cut(s) 195, 600
PspCI CACGTG 1 cut(s) 1162
PspN4I GGNNCC 2 cut(s) 420, 699
PspPI GGNCC 3 cut(s) 419, 508, 836
PsrI GAACNNNNNNTAC 2 cut(s) 419, 451
PstNI CAGNNNCTG 1 cut(s) 1211
PvuII CAGCTG 1 cut(s) 713
RsaI GTAC 2 cut(s) 284, 750
RsaNI GTAC 2 cut(s) 283, 749
RseI CAYNNNNRTG 2 cut(s) 356, 906
SaqAI TTAA 2 cut(s) 198, 1338
SatI GCNGC 5 cut(s) 243, 258, 920, 1118, 1256
Sau3AI GATC 4 cut(s) 130, 263, 311, 898
Sau96I GGNCC 3 cut(s) 419, 508, 836
ScaI AGTACT 1 cut(s) 750
SchI GAGTC 1 cut(s) 1100
SduI GDGCHC 5 cut(s) 482, 700, 1031, 1055, 1272
SfaNI GCATC 2 cut(s) 630, 1302
SfcI CTRYAG 1 cut(s) 559
SfuI TTCGAA 1 cut(s) 373
SmiMI CAYNNNNRTG 2 cut(s) 356, 906
Sse9I AATT 3 cut(s) 203, 375, 452
SseBI AGGCCT 3 cut(s) 296, 565, 1279
SsiI CCGC 1 cut(s) 471
SspI AATATT 1 cut(s) 876
SspMI CTAG 5 cut(s) 231, 861, 1032, 1056, 1173
StuI AGGCCT 3 cut(s) 296, 565, 1279
TaaI ACNGT 2 cut(s) 869, 1207
TaiI ACGT 4 cut(s) 198, 603, 798, 1164
TaqI TCGA 3 cut(s) 262, 373, 629
TasI AATT 3 cut(s) 203, 375, 452
TatI WGTACW 1 cut(s) 748
Tru1I TTAA 2 cut(s) 198, 1338
Tru9I TTAA 2 cut(s) 198, 1338
TscAI CASTG 2 cut(s) 538, 1098
TseI GCWGC 5 cut(s) 242, 257, 919, 1117, 1255
TspDTI ATGAA 5 cut(s) 329, 440, 445, 604, 730
TspRI CASTG 2 cut(s) 538, 1098
Van91I CCANNNNNTGG 1 cut(s) 676
XapI RAATTY 1 cut(s) 375
XmiI GTMKAC 1 cut(s) 558
XmnI GAANNNNTTC 1 cut(s) 868
XspI CTAG 5 cut(s) 231, 861, 1032, 1056, 1173
ZraI GACGTC 1 cut(s) 796
ZrmI AGTACT 1 cut(s) 750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.