E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G18760 AT1G18770 AT1G18780 AT1G21960 AT2G29840 AT3G13228 |
| fragaria_vesca | FvH4_2g27040 |
| malus_domestica | MD08G1162100.v1.1 |
| prunus_persica | Prupe.1G495200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0295911 |
| rosa_laevigata | RLG00000011757 |
| rosa_multiflora | Rmu_sc0003139.1_g000008 |
| rosa_roxburghii | Rroxscaffold_7G00172060 |
| rosa_rugosa | Rorug06G0255000 Rorug06G0255000 |
| rosa_samantha | Rh6AG368800 Rh6BG376500 Rh6CG382700 Rh6DG369300 |
| rosa_wichuraiana | Rw6G032160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 97, 461, 631 |
| AcuI | CTGAAG | 1 cut(s) | 300 |
| AfaI | GTAC | 2 cut(s) | 183, 231 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 462 |
| AgsI | TTSAA | 7 cut(s) | 38, 145, 157, 167, 252, 596, 637 |
| AjnI | CCWGG | 1 cut(s) | 309 |
| Alw21I | GWGCWC | 1 cut(s) | 555 |
| ApeKI | GCWGC | 2 cut(s) | 274, 443 |
| AspS9I | GGNCC | 1 cut(s) | 329 |
| AsuC2I | CCSGG | 1 cut(s) | 440 |
| AsuHPI | GGTGA | 1 cut(s) | 100 |
| AvaII | GGWCC | 1 cut(s) | 329 |
| AxyI | CCTNAGG | 1 cut(s) | 135 |
| BaeGI | GKGCMC | 1 cut(s) | 623 |
| BanII | GRGCYC | 1 cut(s) | 468 |
| Bbv12I | GWGCWC | 1 cut(s) | 555 |
| BbvI | GCAGC | 2 cut(s) | 261, 430 |
| BccI | CCATC | 5 cut(s) | 17, 32, 75, 120, 227 |
| BciT130I | CCWGG | 1 cut(s) | 311 |
| BcnI | CCSGG | 1 cut(s) | 440 |
| BisI | GCNGC | 3 cut(s) | 275, 444, 631 |
| BlsI | GCNGC | 3 cut(s) | 276, 445, 632 |
| Bme1390I | CCNGG | 2 cut(s) | 311, 440 |
| Bme18I | GGWCC | 1 cut(s) | 329 |
| BmgT120I | GGNCC | 1 cut(s) | 329 |
| BmiI | GGNNCC | 2 cut(s) | 315, 331 |
| BmrFI | CCNGG | 2 cut(s) | 311, 440 |
| BmsI | GCATC | 1 cut(s) | 522 |
| BpuEI | CTTGAG | 2 cut(s) | 15, 452 |
| BpuMI | CCSGG | 1 cut(s) | 440 |
| BsaJI | CCNNGG | 1 cut(s) | 309 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 5, 35 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 462 |
| Bse1I | ACTGG | 1 cut(s) | 434 |
| Bse21I | CCTNAGG | 1 cut(s) | 135 |
| Bse3DI | GCAATG | 1 cut(s) | 456 |
| BseBI | CCWGG | 1 cut(s) | 311 |
| BseDI | CCNNGG | 1 cut(s) | 309 |
| BseGI | GGATG | 1 cut(s) | 219 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 462 |
| BseMI | GCAATG | 1 cut(s) | 456 |
| BseMII | CTCAG | 1 cut(s) | 149 |
| BseNI | ACTGG | 1 cut(s) | 434 |
| BseRI | GAGGAG | 1 cut(s) | 62 |
| BseSI | GKGCMC | 1 cut(s) | 623 |
| BseXI | GCAGC | 2 cut(s) | 261, 430 |
| BseYI | CCCAGC | 1 cut(s) | 536 |
| BsiHKAI | GWGCWC | 1 cut(s) | 555 |
| BsiSI | CCGG | 1 cut(s) | 440 |
| BslFI | GGGAC | 2 cut(s) | 326, 422 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 462 |
| BsmFI | GGGAC | 2 cut(s) | 326, 422 |
| Bsp1286I | GDGCHC | 3 cut(s) | 468, 555, 623 |
| BspACI | CCGC | 3 cut(s) | 97, 461, 631 |
| BspCNI | CTCAG | 1 cut(s) | 148 |
| BspLI | GGNNCC | 2 cut(s) | 315, 331 |
| BsrDI | GCAATG | 1 cut(s) | 456 |
| BsrI | ACTGG | 1 cut(s) | 434 |
| BssECI | CCNNGG | 1 cut(s) | 309 |
| Bst2UI | CCWGG | 1 cut(s) | 311 |
| Bst4CI | ACNGT | 3 cut(s) | 86, 229, 386 |
| Bst6I | CTCTTC | 1 cut(s) | 519 |
| BstC8I | GCNNGC | 2 cut(s) | 79, 318 |
| BstDEI | CTNAG | 2 cut(s) | 100, 135 |
| BstF5I | GGATG | 1 cut(s) | 219 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 362, 627 |
| BstNI | CCWGG | 1 cut(s) | 311 |
| BstSCI | CCNGG | 2 cut(s) | 309, 438 |
| BstSLI | GKGCMC | 1 cut(s) | 623 |
| BstV1I | GCAGC | 2 cut(s) | 261, 430 |
| Bsu36I | CCTNAGG | 1 cut(s) | 135 |
| BtsCI | GGATG | 1 cut(s) | 219 |
| Cac8I | GCNNGC | 2 cut(s) | 79, 318 |
| Cfr13I | GGNCC | 1 cut(s) | 329 |
| Csp6I | GTAC | 2 cut(s) | 182, 230 |
| CviAII | CATG | 2 cut(s) | 266, 556 |
| CviJI | RGCY | 7 cut(s) | 240, 316, 356, 404, 443, 466, 601 |
| CviKI_1 | RGCY | 7 cut(s) | 240, 316, 356, 404, 443, 466, 601 |
| CviQI | GTAC | 2 cut(s) | 182, 230 |
| DdeI | CTNAG | 2 cut(s) | 100, 135 |
| Eam1104I | CTCTTC | 1 cut(s) | 519 |
| EarI | CTCTTC | 1 cut(s) | 519 |
| Eco24I | GRGCYC | 1 cut(s) | 468 |
| Eco47I | GGWCC | 1 cut(s) | 329 |
| Eco57I | CTGAAG | 1 cut(s) | 300 |
| Eco81I | CCTNAGG | 1 cut(s) | 135 |
| EcoRII | CCWGG | 1 cut(s) | 309 |
| EcoT38I | GRGCYC | 1 cut(s) | 468 |
| FaeI | CATG | 2 cut(s) | 269, 559 |
| FaiI | YATR | 6 cut(s) | 149, 267, 299, 407, 557, 579 |
| FaqI | GGGAC | 2 cut(s) | 326, 422 |
| FatI | CATG | 2 cut(s) | 265, 555 |
| FauI | CCCGC | 1 cut(s) | 454 |
| Fnu4HI | GCNGC | 3 cut(s) | 275, 444, 631 |
| FokI | GGATG | 1 cut(s) | 206 |
| FriOI | GRGCYC | 1 cut(s) | 468 |
| Fsp4HI | GCNGC | 3 cut(s) | 275, 444, 631 |
| GluI | GCNGC | 3 cut(s) | 275, 444, 631 |
| GsaI | CCCAGC | 1 cut(s) | 540 |
| HapII | CCGG | 1 cut(s) | 440 |
| Hin1II | CATG | 2 cut(s) | 269, 559 |
| HinfI | GANTC | 2 cut(s) | 170, 413 |
| HpaII | CCGG | 1 cut(s) | 440 |
| HphI | GGTGA | 1 cut(s) | 100 |
| Hpy188III | TCNNGA | 4 cut(s) | 137, 167, 469, 478 |
| HpyAV | CCTTC | 2 cut(s) | 184, 466 |
| HpyCH4III | ACNGT | 3 cut(s) | 86, 229, 386 |
| HpyCH4IV | ACGT | 1 cut(s) | 303 |
| HpyCH4V | TGCA | 2 cut(s) | 320, 588 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 362, 627 |
| HpyF3I | CTNAG | 2 cut(s) | 100, 135 |
| HpySE526I | ACGT | 1 cut(s) | 303 |
| Hsp92II | CATG | 2 cut(s) | 269, 559 |
| LmnI | GCTCC | 1 cut(s) | 313 |
| Lsp1109I | GCAGC | 2 cut(s) | 261, 430 |
| LweI | GCATC | 1 cut(s) | 522 |
| MaeII | ACGT | 1 cut(s) | 303 |
| MaeIII | GTNAC | 3 cut(s) | 367, 386, 496 |
| MboII | GAAGA | 2 cut(s) | 85, 536 |
| MhlI | GDGCHC | 3 cut(s) | 468, 555, 623 |
| MluCI | AATT | 5 cut(s) | 122, 162, 393, 487, 638 |
| MmeI | TCCRAC | 1 cut(s) | 522 |
| MnlI | CCTC | 5 cut(s) | 83, 144, 393, 463, 538 |
| MseI | TTAA | 1 cut(s) | 429 |
| MspI | CCGG | 1 cut(s) | 440 |
| MspR9I | CCNGG | 2 cut(s) | 311, 440 |
| MvaI | CCWGG | 1 cut(s) | 311 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 362, 627 |
| NciI | CCSGG | 1 cut(s) | 440 |
| NlaIII | CATG | 2 cut(s) | 269, 559 |
| NlaIV | GGNNCC | 2 cut(s) | 315, 331 |
| NmuCI | GTSAC | 3 cut(s) | 367, 386, 496 |
| PfeI | GAWTC | 2 cut(s) | 170, 413 |
| PkrI | GCNGC | 3 cut(s) | 276, 445, 632 |
| Psp6I | CCWGG | 1 cut(s) | 309 |
| PspFI | CCCAGC | 1 cut(s) | 536 |
| PspGI | CCWGG | 1 cut(s) | 309 |
| PspN4I | GGNNCC | 2 cut(s) | 315, 331 |
| PspPI | GGNCC | 1 cut(s) | 329 |
| RsaI | GTAC | 2 cut(s) | 183, 231 |
| RsaNI | GTAC | 2 cut(s) | 182, 230 |
| SaqAI | TTAA | 1 cut(s) | 429 |
| SatI | GCNGC | 3 cut(s) | 275, 444, 631 |
| Sau96I | GGNCC | 1 cut(s) | 329 |
| ScrFI | CCNGG | 2 cut(s) | 311, 440 |
| SduI | GDGCHC | 3 cut(s) | 468, 555, 623 |
| SetI | ASST | 4 cut(s) | 306, 376, 477, 549 |
| SfaNI | GCATC | 1 cut(s) | 522 |
| SinI | GGWCC | 1 cut(s) | 329 |
| SmlI | CTYRAG | 2 cut(s) | 30, 467 |
| SmoI | CTYRAG | 2 cut(s) | 30, 467 |
| Sse9I | AATT | 5 cut(s) | 122, 162, 393, 487, 638 |
| SsiI | CCGC | 3 cut(s) | 97, 461, 631 |
| StyD4I | CCNGG | 2 cut(s) | 309, 438 |
| TaaI | ACNGT | 3 cut(s) | 86, 229, 386 |
| TaiI | ACGT | 1 cut(s) | 306 |
| TasI | AATT | 5 cut(s) | 122, 162, 393, 487, 638 |
| TauI | GCSGC | 1 cut(s) | 633 |
| TfiI | GAWTC | 2 cut(s) | 170, 413 |
| Tru1I | TTAA | 1 cut(s) | 429 |
| Tru9I | TTAA | 1 cut(s) | 429 |
| TseFI | GTSAC | 3 cut(s) | 367, 386, 496 |
| TseI | GCWGC | 2 cut(s) | 274, 443 |
| Tsp45I | GTSAC | 3 cut(s) | 367, 386, 496 |
| TspDTI | ATGAA | 3 cut(s) | 79, 254, 275 |
| VpaK11BI | GGWCC | 1 cut(s) | 329 |