Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0015551

Physical Location & Seq

Genomic Coordinates Reverse (-)

41637179 .. 41639575

Gene Structure 2397 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G503600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGGCTACCTCTAAACTCAAAACCCAAAGAAAACCCAACAAGCAAATACACCAAAAGGCTCAGAAACAGAACCAAAACCAGAACCAGAAGCCCCAAAAGACAGAGAAGCCACCCTATTGGTCTGTTGTAAGAGGCTTATTGACCTGTAAACATCTCCAACCACTTCAGCTACAACAAGAGCGCAAACAGCAGCTACTGCAACAACAACAACAGCATGAGCAAGCCATGGAGGAAAGTAATGCTGCCAAGAAAAGCAAGAAAATGAGATGCTCTGGCTCACTGTGTAACAACACCAAAATCATGCACAGGCCTGAAATAGGATCTCCTGACGTTCATAAGAAAAGGGCTTCAATGGGTTCAAGTAACAGTAATGAAACTTCAAGCAGATCCATGAAAGCTCCTCTGCATGAGCTCAATGGGGTTGTTTCTACCTCTTCTTCTTCATTATCTGCAGTATCTACTAATAATTCTACTGTTGGTGGTGGGTCTTTTAGAGCAATGCCTTTCAGGAGATTCTCTGGCTGCTATGAGTGCAGAATGGTGGTTGATCCTGTTCTTGGTTTTGCTAGAGACCCTTCTCTGAGAGGCAGCATTTGTTCATGTCCTGAATGTGGTGAGATTTTCATGAAAGCTGAGAACTTGGAGCTTCATCAGGCTGTTAGGCATGCAGTTTCTGAACTGGGTCCTGAAGACACAAGCAAGAACATAGTGGAGATCATATTCCAGTCCAGCTGGCTAAAGAAACAGACCCCAATATGTAAAATCGACCGCATCCTCAAAGTCCACAACACCCAAAAGACCATCTCCAAATTTGAAGAGTACAGAGAATCCATCAAAGCCAAAGCCACCAAGCTCCCCAAGAAACACCCTCGCTGCATTGCAGACGGCAATGAGCTCCTCAGGTTCCACAGCACCACATTTGTGTGCTCACTAGGCCTAAACGGCTCCTCCAATCTCTGCAACTCAATTCCACATTGCAATATCTGCAGCATAATAAAAAATGGGTTCAATAAGTTCTCTGGAGACCTAATCGAAGACGGCATTTTGACAACAGCAACAAGTGGAAGAGCTCATGACAAGGCTGTGGTTGCTGCAGAGGACAATGGCAAGAGGGCAATGCTGGTTTGTCGTGTGATTGCAGGGAGGGTGAAGAAGAACATGGAGGATAGTATTGGTATTGGACCCATTGGTATGGAAGAGTATGACTCTGTGGCTGGAGCTGTGGGAGTTTACTCTAATTTGGATGAGTTGTATGTGTTTAATCCCAAGGCTATTTTGCCTTGTTTTGTTGTCATATATGGAGGTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

437

Amino Acids

48.28

Weight (kDa)

9.41

Isoelectric Point (pI)

47.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015551)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g26340
malus_domestica	MD08G1169800.v1.1 MD15G1356300.v1.1
prunus_persica	Prupe.1G503600_v2.0.a1
pyrus_communis	pycom08g14520 pycom15g31830
rosa_chinensis	RchiOBHm_Chr6g0294921
rosa_laevigata	RLG00000011827
rosa_multiflora	Rmu_sc0002700.1_g000047
rosa_roxburghii	Rroxscaffold_7G00172840
rosa_rugosa	Rorug06G0248300
rosa_samantha	Rh6AG361500 Rh6BG368900 Rh6CG375500 Rh6DG361900
rosa_wichuraiana	Rw6G031520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	769
AclWI	GGATC	3 cut(s)	328, 381, 542
AcsI	RAATTY	1 cut(s)	809
AcuI	CTGAAG	2 cut(s)	149, 708
AfaI	GTAC	1 cut(s)	821
AfiI	CCNNNNNNNGG	3 cut(s)	317, 557, 611
AgsI	TTSAA	5 cut(s)	351, 360, 381, 815, 1009
AleI	CACNNNNGTG	1 cut(s)	920
Alw21I	GWGCWC	4 cut(s)	414, 897, 929, 1072
Alw26I	GTCTC	2 cut(s)	564, 1017
AlwI	GGATC	3 cut(s)	328, 381, 542
AlwNI	CAGNNNCTG	2 cut(s)	196, 674
AoxI	GGCC	2 cut(s)	308, 934
ApeKI	GCWGC	7 cut(s)	190, 242, 522, 588, 873, 987, 1091
ApoI	RAATTY	1 cut(s)	809
AspLEI	GCGC	1 cut(s)	183
AspS9I	GGNCC	2 cut(s)	683, 1181
AsuHPI	GGTGA	2 cut(s)	626, 1159
AvaII	GGWCC	2 cut(s)	683, 1181
AxyI	CCTNAGG	1 cut(s)	899
BanII	GRGCYC	3 cut(s)	414, 897, 1072
BarI	GAAGNNNNNNTAC	2 cut(s)	361, 393
BbsI	GAAGAC	2 cut(s)	696, 1041
Bbv12I	GWGCWC	4 cut(s)	414, 897, 929, 1072
BbvI	GCAGC	7 cut(s)	202, 229, 509, 600, 860, 999, 1078
BccI	CCATC	2 cut(s)	809, 839
BceAI	ACGGC	3 cut(s)	901, 958, 1054
BcoDI	GTCTC	2 cut(s)	564, 1017
BfaI	CTAG	2 cut(s)	567, 932
BfmI	CTRYAG	3 cut(s)	450, 985, 1092
BglI	GCCNNNNNGGC	1 cut(s)	942
BisI	GCNGC	7 cut(s)	191, 243, 523, 589, 874, 988, 1092
BlsI	GCNGC	7 cut(s)	192, 244, 524, 590, 875, 989, 1093
Bme18I	GGWCC	2 cut(s)	683, 1181
BmgT120I	GGNCC	2 cut(s)	683, 1181
BmiI	GGNNCC	4 cut(s)	684, 905, 946, 1183
BmrI	ACTGGG	1 cut(s)	689
BmsI	GCATC	2 cut(s)	257, 780
BmuI	ACTGGG	1 cut(s)	689
BpiI	GAAGAC	2 cut(s)	696, 1041
BplI	GAGNNNNNCTC	2 cut(s)	1190, 1222
BpmI	CTGGAG	2 cut(s)	1041, 1236
BsaI	GGTCTC	2 cut(s)	564, 1017
BsaJI	CCNNGG	2 cut(s)	225, 1266
BsaXI	ACNNNNNCTCC	2 cut(s)	932, 962
Bsc4I	CCNNNNNNNGG	3 cut(s)	317, 557, 611
Bse1I	ACTGG	2 cut(s)	684, 724
Bse21I	CCTNAGG	1 cut(s)	899
Bse3DI	GCAATG	5 cut(s)	504, 876, 895, 973, 1122
BseDI	CCNNGG	2 cut(s)	225, 1266
BseGI	GGATG	2 cut(s)	771, 1249
BseLI	CCNNNNNNNGG	3 cut(s)	317, 557, 611
BseMI	GCAATG	5 cut(s)	504, 876, 895, 973, 1122
BseMII	CTCAG	4 cut(s)	74, 572, 624, 913
BseNI	ACTGG	2 cut(s)	684, 724
BseRI	GAGGAG	3 cut(s)	390, 887, 937
BseXI	GCAGC	7 cut(s)	202, 229, 509, 600, 860, 999, 1078
BsgI	GTGCAG	1 cut(s)	553
Bsh1285I	CGRYCG	1 cut(s)	769
BshFI	GGCC	2 cut(s)	310, 936
BsiEI	CGRYCG	1 cut(s)	769
BsiHKAI	GWGCWC	4 cut(s)	414, 897, 929, 1072
BslI	CCNNNNNNNGG	3 cut(s)	317, 557, 611
BsmAI	GTCTC	2 cut(s)	564, 1017
BsnI	GGCC	2 cut(s)	310, 936
Bso31I	GGTCTC	2 cut(s)	564, 1017
Bsp1286I	GDGCHC	4 cut(s)	414, 897, 929, 1072
Bsp143I	GATC	4 cut(s)	320, 386, 547, 714
Bsp19I	CCATGG	1 cut(s)	225
BspACI	CCGC	1 cut(s)	769
BspANI	GGCC	2 cut(s)	310, 936
BspCNI	CTCAG	4 cut(s)	73, 573, 625, 912
BspHI	TCATGA	2 cut(s)	624, 1072
BspLI	GGNNCC	4 cut(s)	684, 905, 946, 1183
BspMAI	CTGCAG	3 cut(s)	454, 989, 1096
BspPI	GGATC	3 cut(s)	328, 381, 542
BspQI	GCTCTTC	1 cut(s)	1060
BspTNI	GGTCTC	2 cut(s)	564, 1017
BsrDI	GCAATG	5 cut(s)	504, 876, 895, 973, 1122
BsrI	ACTGG	2 cut(s)	684, 724
BssECI	CCNNGG	2 cut(s)	225, 1266
BssMI	GATC	4 cut(s)	320, 386, 547, 714
BssT1I	CCWWGG	2 cut(s)	225, 1266
Bst4CI	ACNGT	3 cut(s)	282, 368, 475
Bst6I	CTCTTC	4 cut(s)	439, 810, 1060, 1191
BstAPI	GCANNNNNTGC	2 cut(s)	196, 984
BstC8I	GCNNGC	3 cut(s)	222, 666, 734
BstDEI	CTNAG	4 cut(s)	60, 581, 633, 899
BstDSI	CCRYGG	1 cut(s)	225
BstENI	CCTNNNNNAGG	1 cut(s)	315
BstF5I	GGATG	2 cut(s)	771, 1249
BstHHI	GCGC	1 cut(s)	183
BstKTI	GATC	4 cut(s)	323, 389, 550, 717
BstMAI	GTCTC	2 cut(s)	564, 1017
BstMBI	GATC	4 cut(s)	320, 386, 547, 714
BstMCI	CGRYCG	1 cut(s)	769
BstMWI	GCNNNNNNNGC	7 cut(s)	187, 196, 531, 933, 942, 984, 1088
BstNSI	RCATGY	1 cut(s)	668
BstSFI	CTRYAG	3 cut(s)	450, 985, 1092
BstV1I	GCAGC	7 cut(s)	202, 229, 509, 600, 860, 999, 1078
BstV2I	GAAGAC	2 cut(s)	696, 1041
BstX2I	RGATCY	2 cut(s)	320, 386
BstXI	CCANNNNNNTGG	2 cut(s)	117, 1192
BstYI	RGATCY	2 cut(s)	320, 386
Bsu36I	CCTNAGG	1 cut(s)	899
BsuRI	GGCC	2 cut(s)	310, 936
BtgI	CCRYGG	1 cut(s)	225
BtsCI	GGATG	2 cut(s)	771, 1249
BtsIMutI	CAGTG	1 cut(s)	278
Cac8I	GCNNGC	3 cut(s)	222, 666, 734
CaiI	CAGNNNCTG	2 cut(s)	196, 674
CciI	TCATGA	2 cut(s)	624, 1072
CfoI	GCGC	1 cut(s)	183
Cfr13I	GGNCC	2 cut(s)	683, 1181
Csp6I	GTAC	1 cut(s)	820
CviQI	GTAC	1 cut(s)	820
DdeI	CTNAG	4 cut(s)	60, 581, 633, 899
DpnI	GATC	4 cut(s)	322, 388, 549, 716
DpnII	GATC	4 cut(s)	320, 386, 547, 714
Eam1104I	CTCTTC	4 cut(s)	439, 810, 1060, 1191
EarI	CTCTTC	4 cut(s)	439, 810, 1060, 1191
Ecl136II	GAGCTC	3 cut(s)	412, 895, 1070
Eco130I	CCWWGG	2 cut(s)	225, 1266
Eco147I	AGGCCT	2 cut(s)	310, 936
Eco24I	GRGCYC	3 cut(s)	414, 897, 1072
Eco31I	GGTCTC	2 cut(s)	564, 1017
Eco47I	GGWCC	2 cut(s)	683, 1181
Eco53kI	GAGCTC	3 cut(s)	412, 895, 1070
Eco57I	CTGAAG	2 cut(s)	149, 708
Eco81I	CCTNAGG	1 cut(s)	899
EcoICRI	GAGCTC	3 cut(s)	412, 895, 1070
EcoNI	CCTNNNNNAGG	1 cut(s)	315
EcoO109I	RGGNCCY	1 cut(s)	683
EcoT14I	CCWWGG	2 cut(s)	225, 1266
EcoT38I	GRGCYC	3 cut(s)	414, 897, 1072
ErhI	CCWWGG	2 cut(s)	225, 1266
Fnu4HI	GCNGC	7 cut(s)	191, 243, 523, 589, 874, 988, 1092
FokI	GGATG	2 cut(s)	758, 1256
FriOI	GRGCYC	3 cut(s)	414, 897, 1072
Fsp4HI	GCNGC	7 cut(s)	191, 243, 523, 589, 874, 988, 1092
FspBI	CTAG	2 cut(s)	567, 932
GlaI	GCGC	1 cut(s)	182
GluI	GCNGC	7 cut(s)	191, 243, 523, 589, 874, 988, 1092
GsuI	CTGGAG	2 cut(s)	1041, 1236
HaeIII	GGCC	2 cut(s)	310, 936
HhaI	GCGC	1 cut(s)	183
Hin6I	GCGC	1 cut(s)	181
HinP1I	GCGC	1 cut(s)	181
HinfI	GANTC	3 cut(s)	513, 827, 1205
HphI	GGTGA	2 cut(s)	626, 1159
Hpy166II	GTNNAC	3 cut(s)	149, 784, 1231
Hpy188I	TCNGA	3 cut(s)	63, 582, 676
Hpy188III	TCNNGA	7 cut(s)	326, 508, 605, 625, 686, 1020, 1073
Hpy8I	GTNNAC	3 cut(s)	149, 784, 1231
HpyAV	CCTTC	1 cut(s)	585
HpyCH4III	ACNGT	3 cut(s)	282, 368, 475
HpyCH4IV	ACGT	1 cut(s)	330
HpyF10VI	GCNNNNNNNGC	7 cut(s)	187, 196, 531, 933, 942, 984, 1088
HpyF3I	CTNAG	4 cut(s)	60, 581, 633, 899
HpySE526I	ACGT	1 cut(s)	330
HspAI	GCGC	1 cut(s)	181
Kzo9I	GATC	4 cut(s)	320, 386, 547, 714
LguI	GCTCTTC	1 cut(s)	1060
LmnI	GCTCC	6 cut(s)	403, 643, 858, 900, 950, 1217
Lsp1109I	GCAGC	7 cut(s)	202, 229, 509, 600, 860, 999, 1078
LweI	GCATC	2 cut(s)	257, 780
MaeI	CTAG	2 cut(s)	567, 932
MaeII	ACGT	1 cut(s)	330
MaeIII	GTNAC	2 cut(s)	284, 362
MalI	GATC	4 cut(s)	322, 388, 549, 716
MboI	GATC	4 cut(s)	320, 386, 547, 714
MflI	RGATCY	2 cut(s)	320, 386
MhlI	GDGCHC	4 cut(s)	414, 897, 929, 1072
MluCI	AATT	4 cut(s)	466, 809, 966, 1237
MlyI	GAGTC	1 cut(s)	1199
MmeI	TCCRAC	1 cut(s)	181
MseI	TTAA	1 cut(s)	1260
MslI	CAYNNNNRTG	3 cut(s)	920, 922, 1190
MspA1I	CMGCKG	1 cut(s)	732
MwoI	GCNNNNNNNGC	7 cut(s)	187, 196, 531, 933, 942, 984, 1088
NcoI	CCATGG	1 cut(s)	225
NdeII	GATC	4 cut(s)	320, 386, 547, 714
NlaIV	GGNNCC	4 cut(s)	684, 905, 946, 1183
NspI	RCATGY	1 cut(s)	668
OliI	CACNNNNGTG	1 cut(s)	920
PaeI	GCATGC	1 cut(s)	668
PagI	TCATGA	2 cut(s)	624, 1072
PceI	AGGCCT	2 cut(s)	310, 936
PciSI	GCTCTTC	1 cut(s)	1060
PfeI	GAWTC	2 cut(s)	513, 827
PkrI	GCNGC	7 cut(s)	192, 244, 524, 590, 875, 989, 1093
PleI	GAGTC	1 cut(s)	1199
PpsI	GAGTC	1 cut(s)	1199
PpuMI	RGGWCCY	1 cut(s)	683
Psp124BI	GAGCTC	3 cut(s)	414, 897, 1072
Psp5II	RGGWCCY	1 cut(s)	683
PspN4I	GGNNCC	4 cut(s)	684, 905, 946, 1183
PspPI	GGNCC	2 cut(s)	683, 1181
PspPPI	RGGWCCY	1 cut(s)	683
PstI	CTGCAG	3 cut(s)	454, 989, 1096
PstNI	CAGNNNCTG	2 cut(s)	196, 674
PsuI	RGATCY	2 cut(s)	320, 386
PvuII	CAGCTG	1 cut(s)	732
RsaI	GTAC	1 cut(s)	821
RsaNI	GTAC	1 cut(s)	820
RseI	CAYNNNNRTG	3 cut(s)	920, 922, 1190
SacI	GAGCTC	3 cut(s)	414, 897, 1072
SapI	GCTCTTC	1 cut(s)	1060
SaqAI	TTAA	1 cut(s)	1260
SatI	GCNGC	7 cut(s)	191, 243, 523, 589, 874, 988, 1092
Sau3AI	GATC	4 cut(s)	320, 386, 547, 714
Sau96I	GGNCC	2 cut(s)	683, 1181
SchI	GAGTC	1 cut(s)	1199
SduI	GDGCHC	4 cut(s)	414, 897, 929, 1072
SfaNI	GCATC	2 cut(s)	257, 780
SfcI	CTRYAG	3 cut(s)	450, 985, 1092
SinI	GGWCC	2 cut(s)	683, 1181
SmiMI	CAYNNNNRTG	3 cut(s)	920, 922, 1190
SphI	GCATGC	1 cut(s)	668
Sse9I	AATT	4 cut(s)	466, 809, 966, 1237
SseBI	AGGCCT	2 cut(s)	310, 936
SsiI	CCGC	1 cut(s)	769
SspMI	CTAG	2 cut(s)	567, 932
SstI	GAGCTC	3 cut(s)	414, 897, 1072
StuI	AGGCCT	2 cut(s)	310, 936
StyI	CCWWGG	2 cut(s)	225, 1266
TaaI	ACNGT	3 cut(s)	282, 368, 475
TaiI	ACGT	1 cut(s)	333
TaqI	TCGA	2 cut(s)	765, 1032
TasI	AATT	4 cut(s)	466, 809, 966, 1237
TatI	WGTACW	1 cut(s)	819
TfiI	GAWTC	2 cut(s)	513, 827
Tru1I	TTAA	1 cut(s)	1260
Tru9I	TTAA	1 cut(s)	1260
TscAI	CASTG	1 cut(s)	285
TseI	GCWGC	7 cut(s)	190, 242, 522, 588, 873, 987, 1091
TspDTI	ATGAA	8 cut(s)	323, 387, 407, 432, 588, 613, 638, 641
TspRI	CASTG	1 cut(s)	285
VpaK11BI	GGWCC	2 cut(s)	683, 1181
XagI	CCTNNNNNAGG	1 cut(s)	315
XapI	RAATTY	1 cut(s)	809
XceI	RCATGY	1 cut(s)	668
XspI	CTAG	2 cut(s)	567, 932

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.