Pentatricopeptide repeat-containing protein At1g19720-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g38470 |
| malus_domestica | MD15G1359600.v1.1 |
| prunus_persica | Prupe.1G507300_v2.0.a1 Prupe.1G507300_v2.0.a1 Prupe.1G507300_v2.0.a1 |
| pyrus_communis | pycom08g14890 pycom15g32200 |
| rosa_chinensis | RchiOBHm_Chr7g0240511 |
| rosa_laevigata | RLG00000000674 |
| rosa_multiflora | Rmu_sc0005327.1_g000007 Rmu_sc0016269.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00219910 |
| rosa_rugosa | Rorug07G0336700 Rorug07G0336800 |
| rosa_samantha | Rh7AG491200 Rh7BG463800 Rh7CG507200 Rh7DG475000 |
| rosa_wichuraiana | Rw7G041160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1365 |
| AccB1I | GGYRCC | 1 cut(s) | 137 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 224, 1553 |
| AccI | GTMKAC | 1 cut(s) | 289 |
| AccII | CGCG | 1 cut(s) | 1679 |
| AccIII | TCCGGA | 1 cut(s) | 1437 |
| AciI | CCGC | 2 cut(s) | 580, 1338 |
| AclI | AACGTT | 1 cut(s) | 1473 |
| AclWI | GGATC | 2 cut(s) | 1037, 1050 |
| AcoI | YGGCCR | 3 cut(s) | 1381, 1975, 2151 |
| AcsI | RAATTY | 3 cut(s) | 6, 1048, 2116 |
| AcuI | CTGAAG | 3 cut(s) | 332, 1154, 1806 |
| AcvI | CACGTG | 1 cut(s) | 1162 |
| AfaI | GTAC | 2 cut(s) | 42, 549 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 224, 496, 684, 1395, 1553 |
| AflIII | ACRYGT | 2 cut(s) | 1677, 1731 |
| AjiI | CACGTC | 1 cut(s) | 1354 |
| AjnI | CCWGG | 1 cut(s) | 28 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1447, 1479, 1875, 1907 |
| Alw21I | GWGCWC | 4 cut(s) | 574, 1578, 1621, 1858 |
| Alw26I | GTCTC | 2 cut(s) | 181, 1287 |
| AlwI | GGATC | 2 cut(s) | 1037, 1050 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2198 |
| Ama87I | CYCGRG | 1 cut(s) | 1037 |
| Aor13HI | TCCGGA | 1 cut(s) | 1437 |
| AoxI | GGCC | 8 cut(s) | 778, 938, 1087, 1381, 1825, 1975, 2151, 2160 |
| ApeKI | GCWGC | 4 cut(s) | 817, 1625, 1843, 2192 |
| ApoI | RAATTY | 3 cut(s) | 6, 1048, 2116 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 680, 712 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 9, 232, 967, 1526 |
| AspLEI | GCGC | 3 cut(s) | 661, 1721, 2197 |
| AspS9I | GGNCC | 4 cut(s) | 1435, 1849, 1895, 2160 |
| AsuHPI | GGTGA | 1 cut(s) | 1949 |
| AsuII | TTCGAA | 1 cut(s) | 13 |
| AvaI | CYCGRG | 1 cut(s) | 1037 |
| AvaII | GGWCC | 3 cut(s) | 1435, 1849, 1895 |
| BalI | TGGCCA | 3 cut(s) | 1383, 1977, 2153 |
| BamHI | GGATCC | 1 cut(s) | 1042 |
| BanI | GGYRCC | 1 cut(s) | 137 |
| BanII | GRGCYC | 1 cut(s) | 1858 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 513, 545 |
| BbrPI | CACGTG | 1 cut(s) | 1162 |
| Bbv12I | GWGCWC | 4 cut(s) | 574, 1578, 1621, 1858 |
| BbvI | GCAGC | 4 cut(s) | 829, 1637, 1855, 2204 |
| BccI | CCATC | 5 cut(s) | 505, 619, 1426, 1435, 2176 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 846, 880 |
| BciT130I | CCWGG | 1 cut(s) | 30 |
| BciVI | GTATCC | 1 cut(s) | 1667 |
| BcoDI | GTCTC | 2 cut(s) | 181, 1287 |
| BfmI | CTRYAG | 2 cut(s) | 286, 552 |
| BfoI | RGCGCY | 1 cut(s) | 2198 |
| BfuI | GTATCC | 1 cut(s) | 1667 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2159 |
| BisI | GCNGC | 5 cut(s) | 818, 1339, 1626, 1844, 2193 |
| BlpI | GCTNAGC | 1 cut(s) | 206 |
| BlsI | GCNGC | 5 cut(s) | 819, 1340, 1627, 1845, 2194 |
| Bme1390I | CCNGG | 1 cut(s) | 30 |
| Bme18I | GGWCC | 3 cut(s) | 1435, 1849, 1895 |
| BmeT110I | CYCGRG | 1 cut(s) | 1037 |
| BmgBI | CACGTC | 1 cut(s) | 1354 |
| BmgT120I | GGNCC | 4 cut(s) | 1435, 1849, 1895, 2160 |
| BmiI | GGNNCC | 3 cut(s) | 139, 229, 1044 |
| BmrFI | CCNGG | 1 cut(s) | 30 |
| BmsI | GCATC | 6 cut(s) | 455, 706, 1000, 1339, 2056, 2092 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 206 |
| Bpu14I | TTCGAA | 1 cut(s) | 13 |
| BpuEI | CTTGAG | 2 cut(s) | 288, 1699 |
| BsaAI | YACGTR | 1 cut(s) | 1162 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1641 |
| BsaJI | CCNNGG | 6 cut(s) | 720, 941, 1038, 1230, 1654, 1669 |
| BsaWI | WCCGGW | 1 cut(s) | 1437 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 224, 496, 684, 1395, 1553 |
| Bse1I | ACTGG | 2 cut(s) | 139, 598 |
| Bse3DI | GCAATG | 4 cut(s) | 20, 247, 924, 2163 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1641 |
| BseAI | TCCGGA | 1 cut(s) | 1437 |
| BseBI | CCWGG | 1 cut(s) | 30 |
| BseDI | CCNNGG | 6 cut(s) | 720, 941, 1038, 1230, 1654, 1669 |
| BseGI | GGATG | 6 cut(s) | 588, 630, 1015, 1206, 1446, 2071 |
| BseJI | GATNNNNATC | 1 cut(s) | 1641 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 224, 496, 684, 1395, 1553 |
| BseMI | GCAATG | 4 cut(s) | 20, 247, 924, 2163 |
| BseMII | CTCAG | 3 cut(s) | 220, 1943, 2196 |
| BseNI | ACTGG | 2 cut(s) | 139, 598 |
| BseRI | GAGGAG | 1 cut(s) | 1916 |
| BseXI | GCAGC | 4 cut(s) | 829, 1637, 1855, 2204 |
| BsgI | GTGCAG | 1 cut(s) | 1104 |
| Bsh1236I | CGCG | 1 cut(s) | 1679 |
| BshFI | GGCC | 8 cut(s) | 780, 940, 1089, 1383, 1827, 1977, 2153, 2162 |
| BshNI | GGYRCC | 1 cut(s) | 137 |
| BsiHKAI | GWGCWC | 4 cut(s) | 574, 1578, 1621, 1858 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1037 |
| BsiSI | CCGG | 1 cut(s) | 1438 |
| BslFI | GGGAC | 2 cut(s) | 497, 701 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 224, 496, 684, 1395, 1553 |
| BsmAI | GTCTC | 2 cut(s) | 181, 1287 |
| BsmBI | CGTCTC | 1 cut(s) | 1287 |
| BsmFI | GGGAC | 2 cut(s) | 497, 701 |
| BsmI | GAATGC | 3 cut(s) | 661, 859, 1013 |
| BsnI | GGCC | 8 cut(s) | 780, 940, 1089, 1383, 1827, 1977, 2153, 2162 |
| BsoBI | CYCGRG | 1 cut(s) | 1037 |
| Bsp119I | TTCGAA | 1 cut(s) | 13 |
| Bsp1286I | GDGCHC | 4 cut(s) | 574, 1578, 1621, 1858 |
| Bsp13I | TCCGGA | 1 cut(s) | 1437 |
| Bsp143I | GATC | 3 cut(s) | 1042, 1636, 1999 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 206 |
| Bsp19I | CCATGG | 2 cut(s) | 720, 1669 |
| BspACI | CCGC | 2 cut(s) | 580, 1338 |
| BspANI | GGCC | 8 cut(s) | 780, 940, 1089, 1383, 1827, 1977, 2153, 2162 |
| BspCNI | CTCAG | 3 cut(s) | 219, 1944, 2197 |
| BspEI | TCCGGA | 1 cut(s) | 1437 |
| BspFNI | CGCG | 1 cut(s) | 1679 |
| BspHI | TCATGA | 1 cut(s) | 768 |
| BspLI | GGNNCC | 3 cut(s) | 139, 229, 1044 |
| BspPI | GGATC | 2 cut(s) | 1037, 1050 |
| BspQI | GCTCTTC | 1 cut(s) | 906 |
| BspT104I | TTCGAA | 1 cut(s) | 13 |
| BspT107I | GGYRCC | 1 cut(s) | 137 |
| BsrDI | GCAATG | 4 cut(s) | 20, 247, 924, 2163 |
| BsrI | ACTGG | 2 cut(s) | 139, 598 |
| BssECI | CCNNGG | 6 cut(s) | 720, 941, 1038, 1230, 1654, 1669 |
| BssMI | GATC | 3 cut(s) | 1042, 1636, 1999 |
| BssT1I | CCWWGG | 4 cut(s) | 720, 1230, 1654, 1669 |
| Bst2UI | CCWGG | 1 cut(s) | 30 |
| Bst4CI | ACNGT | 4 cut(s) | 128, 287, 556, 683 |
| Bst6I | CTCTTC | 4 cut(s) | 324, 783, 906, 1957 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1631 |
| BstBAI | YACGTR | 1 cut(s) | 1162 |
| BstBI | TTCGAA | 1 cut(s) | 13 |
| BstC8I | GCNNGC | 5 cut(s) | 357, 1066, 1087, 1381, 1825 |
| BstDEI | CTNAG | 8 cut(s) | 206, 388, 1105, 1319, 1505, 1952, 2046, 2205 |
| BstDSI | CCRYGG | 2 cut(s) | 720, 1669 |
| BstEII | GGTNACC | 1 cut(s) | 32 |
| BstF5I | GGATG | 6 cut(s) | 588, 630, 1015, 1206, 1446, 2071 |
| BstFNI | CGCG | 1 cut(s) | 1679 |
| BstH2I | RGCGCY | 1 cut(s) | 2198 |
| BstHHI | GCGC | 3 cut(s) | 661, 1721, 2197 |
| BstKTI | GATC | 3 cut(s) | 1045, 1639, 2002 |
| BstMAI | GTCTC | 2 cut(s) | 181, 1287 |
| BstMBI | GATC | 3 cut(s) | 1042, 1636, 1999 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 361, 1010, 1295, 1385, 1625, 1631, 2159 |
| BstNI | CCWGG | 1 cut(s) | 30 |
| BstNSI | RCATGY | 5 cut(s) | 529, 1159, 1735, 1843, 2041 |
| BstPI | GGTNACC | 1 cut(s) | 32 |
| BstSCI | CCNGG | 1 cut(s) | 28 |
| BstSFI | CTRYAG | 2 cut(s) | 286, 552 |
| BstUI | CGCG | 1 cut(s) | 1679 |
| BstV1I | GCAGC | 4 cut(s) | 829, 1637, 1855, 2204 |
| BstX2I | RGATCY | 1 cut(s) | 1042 |
| BstYI | RGATCY | 1 cut(s) | 1042 |
| BsuI | GTATCC | 1 cut(s) | 1667 |
| BsuRI | GGCC | 8 cut(s) | 780, 940, 1089, 1383, 1827, 1977, 2153, 2162 |
| BtgI | CCRYGG | 2 cut(s) | 720, 1669 |
| BtrI | CACGTC | 1 cut(s) | 1354 |
| BtsCI | GGATG | 6 cut(s) | 588, 630, 1015, 1206, 1446, 2071 |
| BtsI | GCAGTG | 1 cut(s) | 485 |
| BtsIMutI | CAGTG | 1 cut(s) | 485 |
| Cac8I | GCNNGC | 5 cut(s) | 357, 1066, 1087, 1381, 1825 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2198 |
| CciI | TCATGA | 1 cut(s) | 768 |
| CfoI | GCGC | 3 cut(s) | 661, 1721, 2197 |
| Cfr13I | GGNCC | 4 cut(s) | 1435, 1849, 1895, 2160 |
| CseI | GACGC | 2 cut(s) | 1127, 1304 |
| Csp6I | GTAC | 2 cut(s) | 41, 548 |
| CviQI | GTAC | 2 cut(s) | 41, 548 |
| DdeI | CTNAG | 8 cut(s) | 206, 388, 1105, 1319, 1505, 1952, 2046, 2205 |
| DpnI | GATC | 3 cut(s) | 1044, 1638, 2001 |
| DpnII | GATC | 3 cut(s) | 1042, 1636, 1999 |
| DraI | TTTAAA | 1 cut(s) | 1101 |
| EaeI | YGGCCR | 3 cut(s) | 1381, 1975, 2151 |
| Eam1104I | CTCTTC | 4 cut(s) | 324, 783, 906, 1957 |
| EarI | CTCTTC | 4 cut(s) | 324, 783, 906, 1957 |
| Ecl136II | GAGCTC | 1 cut(s) | 1856 |
| Eco130I | CCWWGG | 4 cut(s) | 720, 1230, 1654, 1669 |
| Eco147I | AGGCCT | 2 cut(s) | 780, 1089 |
| Eco24I | GRGCYC | 1 cut(s) | 1858 |
| Eco47I | GGWCC | 3 cut(s) | 1435, 1849, 1895 |
| Eco53kI | GAGCTC | 1 cut(s) | 1856 |
| Eco57I | CTGAAG | 3 cut(s) | 332, 1154, 1806 |
| Eco72I | CACGTG | 1 cut(s) | 1162 |
| Eco88I | CYCGRG | 1 cut(s) | 1037 |
| Eco91I | GGTNACC | 1 cut(s) | 32 |
| EcoICRI | GAGCTC | 1 cut(s) | 1856 |
| EcoO65I | GGTNACC | 1 cut(s) | 32 |
| EcoRI | GAATTC | 1 cut(s) | 2116 |
| EcoRII | CCWGG | 1 cut(s) | 28 |
| EcoT14I | CCWWGG | 4 cut(s) | 720, 1230, 1654, 1669 |
| EcoT22I | ATGCAT | 2 cut(s) | 1015, 1332 |
| EcoT38I | GRGCYC | 1 cut(s) | 1858 |
| ErhI | CCWWGG | 4 cut(s) | 720, 1230, 1654, 1669 |
| Esp3I | CGTCTC | 1 cut(s) | 1287 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 371, 403, 1676, 1708, 1875, 1907 |
| FaqI | GGGAC | 2 cut(s) | 497, 701 |
| FauNDI | CATATG | 1 cut(s) | 1414 |
| FblI | GTMKAC | 1 cut(s) | 289 |
| Fnu4HI | GCNGC | 5 cut(s) | 818, 1339, 1626, 1844, 2193 |
| FokI | GGATG | 6 cut(s) | 595, 637, 1022, 1213, 1453, 2078 |
| FriOI | GRGCYC | 1 cut(s) | 1858 |
| Fsp4HI | GCNGC | 5 cut(s) | 818, 1339, 1626, 1844, 2193 |
| GlaI | GCGC | 3 cut(s) | 660, 1720, 2196 |
| GluI | GCNGC | 5 cut(s) | 818, 1339, 1626, 1844, 2193 |
| HaeII | RGCGCY | 1 cut(s) | 2198 |
| HaeIII | GGCC | 8 cut(s) | 780, 940, 1089, 1383, 1827, 1977, 2153, 2162 |
| HapII | CCGG | 1 cut(s) | 1438 |
| HgaI | GACGC | 2 cut(s) | 1127, 1304 |
| HhaI | GCGC | 3 cut(s) | 661, 1721, 2197 |
| Hin6I | GCGC | 3 cut(s) | 659, 1719, 2195 |
| HinP1I | GCGC | 3 cut(s) | 659, 1719, 2195 |
| HincII | GTYRAC | 2 cut(s) | 1587, 1729 |
| HindII | GTYRAC | 2 cut(s) | 1587, 1729 |
| HindIII | AAGCTT | 3 cut(s) | 105, 353, 1515 |
| HinfI | GANTC | 7 cut(s) | 295, 433, 604, 963, 1583, 1642, 2058 |
| HpaII | CCGG | 1 cut(s) | 1438 |
| HphI | GGTGA | 1 cut(s) | 1949 |
| Hpy166II | GTNNAC | 5 cut(s) | 290, 442, 1587, 1729, 1834 |
| Hpy188I | TCNGA | 9 cut(s) | 238, 312, 475, 561, 640, 984, 1134, 1641, 1953 |
| Hpy188III | TCNNGA | 6 cut(s) | 769, 1438, 1531, 1748, 1777, 1859 |
| Hpy8I | GTNNAC | 5 cut(s) | 290, 442, 1587, 1729, 1834 |
| HpyAV | CCTTC | 6 cut(s) | 515, 770, 923, 1160, 1297, 1880 |
| HpyCH4III | ACNGT | 4 cut(s) | 128, 287, 556, 683 |
| HpyCH4IV | ACGT | 3 cut(s) | 1161, 1353, 1473 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 361, 1010, 1295, 1385, 1625, 1631, 2159 |
| HpyF3I | CTNAG | 8 cut(s) | 206, 388, 1105, 1319, 1505, 1952, 2046, 2205 |
| HpySE526I | ACGT | 3 cut(s) | 1161, 1353, 1473 |
| HspAI | GCGC | 3 cut(s) | 659, 1719, 2195 |
| Kpn2I | TCCGGA | 1 cut(s) | 1437 |
| Kzo9I | GATC | 3 cut(s) | 1042, 1636, 1999 |
| LguI | GCTCTTC | 1 cut(s) | 906 |
| LmnI | GCTCC | 1 cut(s) | 1581 |
| Lsp1109I | GCAGC | 4 cut(s) | 829, 1637, 1855, 2204 |
| LweI | GCATC | 6 cut(s) | 455, 706, 1000, 1339, 2056, 2092 |
| MaeII | ACGT | 3 cut(s) | 1161, 1353, 1473 |
| MaeIII | GTNAC | 5 cut(s) | 32, 269, 281, 528, 1054 |
| MalI | GATC | 3 cut(s) | 1044, 1638, 2001 |
| MboI | GATC | 3 cut(s) | 1042, 1636, 1999 |
| MboII | GAAGA | 8 cut(s) | 341, 385, 800, 893, 938, 1799, 1895, 1974 |
| MfeI | CAATTG | 2 cut(s) | 795, 1059 |
| MflI | RGATCY | 1 cut(s) | 1042 |
| MhlI | GDGCHC | 4 cut(s) | 574, 1578, 1621, 1858 |
| MlsI | TGGCCA | 3 cut(s) | 1383, 1977, 2153 |
| MluI | ACGCGT | 1 cut(s) | 1677 |
| MluNI | TGGCCA | 3 cut(s) | 1383, 1977, 2153 |
| MlyI | GAGTC | 1 cut(s) | 1592 |
| MmeI | TCCRAC | 2 cut(s) | 320, 1787 |
| Mox20I | TGGCCA | 3 cut(s) | 1383, 1977, 2153 |
| Mph1103I | ATGCAT | 2 cut(s) | 1015, 1332 |
| MroI | TCCGGA | 1 cut(s) | 1437 |
| MroXI | GAANNNNTTC | 4 cut(s) | 9, 232, 967, 1526 |
| MscI | TGGCCA | 3 cut(s) | 1383, 1977, 2153 |
| MseI | TTAA | 7 cut(s) | 587, 704, 1100, 1175, 1343, 1682, 2094 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1160 |
| Msp20I | TGGCCA | 3 cut(s) | 1383, 1977, 2153 |
| MspA1I | CMGCKG | 2 cut(s) | 820, 1846 |
| MspI | CCGG | 1 cut(s) | 1438 |
| MspR9I | CCNGG | 1 cut(s) | 30 |
| MunI | CAATTG | 2 cut(s) | 795, 1059 |
| Mva1269I | GAATGC | 3 cut(s) | 661, 859, 1013 |
| MvaI | CCWGG | 1 cut(s) | 30 |
| MvnI | CGCG | 1 cut(s) | 1679 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 361, 1010, 1295, 1385, 1625, 1631, 2159 |
| NcoI | CCATGG | 2 cut(s) | 720, 1669 |
| NdeI | CATATG | 1 cut(s) | 1414 |
| NdeII | GATC | 3 cut(s) | 1042, 1636, 1999 |
| NlaIV | GGNNCC | 3 cut(s) | 139, 229, 1044 |
| NmeAIII | GCCGAG | 1 cut(s) | 966 |
| NmuCI | GTSAC | 1 cut(s) | 281 |
| NsiI | ATGCAT | 2 cut(s) | 1015, 1332 |
| NspI | RCATGY | 5 cut(s) | 529, 1159, 1735, 1843, 2041 |
| NspV | TTCGAA | 1 cut(s) | 13 |
| PagI | TCATGA | 1 cut(s) | 768 |
| PceI | AGGCCT | 2 cut(s) | 780, 1089 |
| PciI | ACATGT | 1 cut(s) | 1731 |
| PciSI | GCTCTTC | 1 cut(s) | 906 |
| PctI | GAATGC | 3 cut(s) | 661, 859, 1013 |
| PdmI | GAANNNNTTC | 4 cut(s) | 9, 232, 967, 1526 |
| PfeI | GAWTC | 6 cut(s) | 295, 433, 604, 963, 1642, 2058 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 224, 1553 |
| PkrI | GCNGC | 5 cut(s) | 819, 1340, 1627, 1845, 2194 |
| PleI | GAGTC | 1 cut(s) | 1591 |
| PmaCI | CACGTG | 1 cut(s) | 1162 |
| PmlI | CACGTG | 1 cut(s) | 1162 |
| PpsI | GAGTC | 1 cut(s) | 1591 |
| Ppu21I | YACGTR | 1 cut(s) | 1162 |
| PscI | ACATGT | 1 cut(s) | 1731 |
| PsiI | TTATAA | 1 cut(s) | 1365 |
| Psp124BI | GAGCTC | 1 cut(s) | 1858 |
| Psp1406I | AACGTT | 1 cut(s) | 1473 |
| Psp6I | CCWGG | 1 cut(s) | 28 |
| PspCI | CACGTG | 1 cut(s) | 1162 |
| PspEI | GGTNACC | 1 cut(s) | 32 |
| PspGI | CCWGG | 1 cut(s) | 28 |
| PspN4I | GGNNCC | 3 cut(s) | 139, 229, 1044 |
| PspPI | GGNCC | 4 cut(s) | 1435, 1849, 1895, 2160 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 540, 572 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2198 |
| PsuI | RGATCY | 1 cut(s) | 1042 |
| PvuII | CAGCTG | 2 cut(s) | 820, 1846 |
| RsaI | GTAC | 2 cut(s) | 42, 549 |
| RsaNI | GTAC | 2 cut(s) | 41, 548 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1160 |
| SacI | GAGCTC | 1 cut(s) | 1858 |
| SapI | GCTCTTC | 1 cut(s) | 906 |
| SaqAI | TTAA | 7 cut(s) | 587, 704, 1100, 1175, 1343, 1682, 2094 |
| SatI | GCNGC | 5 cut(s) | 818, 1339, 1626, 1844, 2193 |
| Sau3AI | GATC | 3 cut(s) | 1042, 1636, 1999 |
| Sau96I | GGNCC | 4 cut(s) | 1435, 1849, 1895, 2160 |
| SchI | GAGTC | 1 cut(s) | 1592 |
| ScrFI | CCNGG | 1 cut(s) | 30 |
| SduI | GDGCHC | 4 cut(s) | 574, 1578, 1621, 1858 |
| SfaNI | GCATC | 6 cut(s) | 455, 706, 1000, 1339, 2056, 2092 |
| SfcI | CTRYAG | 2 cut(s) | 286, 552 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 2159 |
| SfuI | TTCGAA | 1 cut(s) | 13 |
| SinI | GGWCC | 3 cut(s) | 1435, 1849, 1895 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1160 |
| SmlI | CTYRAG | 2 cut(s) | 303, 1714 |
| SmoI | CTYRAG | 2 cut(s) | 303, 1714 |
| SseBI | AGGCCT | 2 cut(s) | 780, 1089 |
| SsiI | CCGC | 2 cut(s) | 580, 1338 |
| SspI | AATATT | 3 cut(s) | 908, 1374, 1459 |
| SstI | GAGCTC | 1 cut(s) | 1858 |
| StuI | AGGCCT | 2 cut(s) | 780, 1089 |
| StyD4I | CCNGG | 1 cut(s) | 28 |
| StyI | CCWWGG | 4 cut(s) | 720, 1230, 1654, 1669 |
| TaaI | ACNGT | 4 cut(s) | 128, 287, 556, 683 |
| TaiI | ACGT | 3 cut(s) | 1164, 1356, 1476 |
| TaqI | TCGA | 4 cut(s) | 13, 371, 1998, 2138 |
| TaqII | GACCGA | 2 cut(s) | 459, 1866 |
| TauI | GCSGC | 1 cut(s) | 1341 |
| TfiI | GAWTC | 6 cut(s) | 295, 433, 604, 963, 1642, 2058 |
| Tru1I | TTAA | 7 cut(s) | 587, 704, 1100, 1175, 1343, 1682, 2094 |
| Tru9I | TTAA | 7 cut(s) | 587, 704, 1100, 1175, 1343, 1682, 2094 |
| TscAI | CASTG | 1 cut(s) | 485 |
| TseFI | GTSAC | 1 cut(s) | 281 |
| TseI | GCWGC | 4 cut(s) | 817, 1625, 1843, 2192 |
| Tsp45I | GTSAC | 1 cut(s) | 281 |
| TspRI | CASTG | 1 cut(s) | 485 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 224, 1553 |
| VpaK11BI | GGWCC | 3 cut(s) | 1435, 1849, 1895 |
| XapI | RAATTY | 3 cut(s) | 6, 1048, 2116 |
| XceI | RCATGY | 5 cut(s) | 529, 1159, 1735, 1843, 2041 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1391 |
| XmiI | GTMKAC | 1 cut(s) | 289 |
| XmnI | GAANNNNTTC | 4 cut(s) | 9, 232, 967, 1526 |
| Zsp2I | ATGCAT | 2 cut(s) | 1015, 1332 |