RchiOBHm_Chr7g0240511

Pentatricopeptide repeat-containing protein At1g19720-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0012631
Physical Location & Seq
Forward (+)
66488792 .. 66492424
3633 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21555

Sequence Viewer

Length: 2151 bp
ATGGAGCTTCTTCGTTCTGCTTTGCTTCCCACCACTCCCTTCTTCACTGACCCCTCTCCCTCACAACCACCCATCAATCCTCACACACCCAAATTCAAATTCCGAGCTTCCACAGACACCACCAACGTTCCCACCACCCCCACACTCTTAAACCCACAAGCCCATCTCGCTTTTACCGCCAAAAAAGCCTCGGACTTTAGTCACAGTCCAGGAGCTCAACCCAGCTCTGAGGTTAGTCACTGCATTTCTTTACTTAGAGGTAACCATGTAGCTGATTGTAGACAAATTCATGCTCTTGCTTTGAAGTTGAATGCTTTTGAAGTGAATAGTAGGGTAGGAAACAAGCTTGCTATGCTTTACTCCAAGAACTATGAGCTTTTAGACTATGCCCAGAAGCTGTTCTACGAAATGCCTAAGAGAACTGTACCCACTTACGCTGCTTTGATTAGTGCGTATTGTCGTGCCGAGCAATGGGAGGACTTGTTCTTGGTGTTTAGGTTGATGGTTGATGAGGGAATGGTGCCTGATGTGTATGTTGTGCCTACACTTTTGAAAGCGTGTGCGCTGACGAAGATGGTGGGGATTGGGAAAATGATTCATGGGTTTGTTATGAGGAAGGAGATGGATTCGGATGTTTTTGTGGGTAATTCGCTTGTAGATTTTTATGCCAACTGTGGGGATTTGGGAGTTGCGGTGAGTGTGTTTGGCGCAATGAGGGAAAGAGATGTGGTTTCGTGGACTGCCCTTGTTTCGGCTTATATGAATGAGGGTCTTTTTGAGGAAGCGATGGAGGTTTTTGAGTCCATGAAGGTGAATGGGGTGAAGAGGGATTTGATATCTTGGAATGCTCTTGTTTCGGGGTTTGCACAGAATGGGGAGATTGATTTGGCTCTTCGGTATTTGGATGCAATGCAAGCAGAAGGGTTGAGGCCGAGAGTTAATTCTTGGAATGGAGTCATTTCGGGCTGTATTCAGAATGAATATTTTGAGGATGCTTTGGATGCGTTTTATAAAATGTTGTGTTTCCCCGAGGAGCCGAATTTTGTTACAATTGCAAGCATTTTACCAGCTTGTGCAGGCTTGAAAGATCTGAATTTAGGCAGGGCAATTCATGGATTTTCTCTGAAGCGTCAGCTTTGCAGTAATACTCATGTGGAAGGTTCATTGATTGGTATGTACTCAAAATGTGGGATGAAAGATTATATGATTGCAGCTTATGTGAATTCAGGAGAAACAGAGAAGGGAATAGAGCTTCTAAGGGTGATGCATCATCATGGCTTAAAACCTGATGTGGTGTCCTATAACACAATATTGGCTGGCCATGCAAGAAATGGGCAAAAGAATGAGGCATATGAGTTGCTTAATGAGATGGTCCGGATGGATTTGAAACCAAATATTATCTCTTTCAACGTTTTAATTTCTGGTTTTCAACAATTTGGGCTTAGTTTTGAAGCTTTGAAATTGTTCTGTACCATGCAATTCCCATCTGATCGTTCCTTTGCTGATTTTGTGCTCCCTGAGTCAATTCAACCAAATTCCATTACTATTGCTGGTGCTCTTGCAGCTTGTGCTGATCTCAATCTACTATCCCAAGGGAAGGAAATCCATGGATACACGCTGAGGAGTGGCTTTGAGCCTAATGTCTATATCTCAAGTGCATTGGTTGACATGTACTCGAAATGTCTGGATATTGTCTCAGCAACGAATGTATTTAGGAGAATTGAGGACAGAAACACAATCTGTTGGAATGCTATGATCTCAGGCCATGTCAACAACATGCAGCTGAACTTAGCTCTTGAACTTTTCTGCGAAATGCTGGAAGAAGGTCTTGAACCAAGCTCTATCACACTGATGATACTTCTCCTCACTTGTGGTGATATGACAGCTCTGAGATTTGGAAGAGAATTACATGGATATATCATAAAGAGTCAGCTTGATCAGTCTGATAGTACGCTTGCAAGTGCCTTGGTAGGCATGTATGCCAATTGTGGTAGTATCAAGGAAGCTAAATCAGTGTTTGACTTAGAAGTTAAAAAAGATGCCATGCTGTGGAATGCCATGTTATCTGCTTATTCAACTAATGGAATGCTCAATAATGCCCTTGCCTTGGTTGGACAAATGGAGTTGGTGGGAGTTGTGCCTGAGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

716

Amino Acids

79.26

Weight (kDa)

5.48

Isoelectric Point (pI)

36.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 141 - 188 3e-07 PPR repeat family
TPR_24 PF23276 226 - 337 4.8e-07 Fungal tetratrico peptide repeats
PPR_2 PF13041 241 - 277 2.9e-08 PPR repeat family
PPR_3 PF13812 242 - 288 1e-06 Pentatricopeptide repeat domain
PPR PF01535 244 - 274 6.5e-08 PPR repeat
TPR_24 PF23276 257 - 340 4.4e-06 Fungal tetratrico peptide repeats
PPR_3 PF13812 418 - 474 1.4e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 426 - 458 1.2e-09 PPR repeat
PPR_2 PF13041 429 - 476 1.5e-15 PPR repeat family
PPR PF01535 432 - 461 6.1e-06 PPR repeat
PPR_2 PF13041 578 - 622 1.5e-10 PPR repeat family
PPR PF01535 581 - 610 2.2e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1011
AccB1I GGYRCC 1 cut(s) 520
AccB7I CCANNNNNTGG 1 cut(s) 2049
AccI GTMKAC 1 cut(s) 280
AccIII TCCGGA 1 cut(s) 1374
AciI CCGC 2 cut(s) 177, 692
AclI AACGTT 2 cut(s) 126, 1410
AcoI YGGCCR 1 cut(s) 1318
AcsI RAATTY 7 cut(s) 92, 98, 285, 1039, 1093, 1222, 1534
AcuI CTGAAG 1 cut(s) 1145
AfaI GTAC 5 cut(s) 426, 1178, 1471, 1673, 1951
AfiI CCNNNNNNNGG 6 cut(s) 471, 675, 751, 1597, 2049, 2107
AflIII ACRYGT 1 cut(s) 1668
AjnI CCWGG 1 cut(s) 208
AjuI GAANNNNNNNTTGG 2 cut(s) 83, 115
AloI GAACNNNNNNTCC 2 cut(s) 467, 499
Alw21I GWGCWC 3 cut(s) 217, 1515, 1558
Alw26I GTCTC 1 cut(s) 1699
AlwNI CAGNNNCTG 1 cut(s) 397
Ama87I CYCGRG 1 cut(s) 1028
Aor13HI TCCGGA 1 cut(s) 1374
AoxI GGCC 3 cut(s) 929, 1318, 1762
ApeKI GCWGC 4 cut(s) 437, 1211, 1562, 1780
ApoI RAATTY 7 cut(s) 92, 98, 285, 1039, 1093, 1222, 1534
Asp700I GAANNNNTTC 2 cut(s) 398, 1463
AspLEI GCGC 2 cut(s) 565, 710
AspS9I GGNCC 1 cut(s) 1372
AsuHPI GGTGA 5 cut(s) 706, 823, 832, 1273, 1886
AvaI CYCGRG 1 cut(s) 1028
AvaII GGWCC 1 cut(s) 1372
BalI TGGCCA 1 cut(s) 1320
BanI GGYRCC 1 cut(s) 520
BanII GRGCYC 1 cut(s) 217
BarI GAAGNNNNNNTAC 2 cut(s) 386, 418
Bbv12I GWGCWC 3 cut(s) 217, 1515, 1558
BbvCI CCTCAGC 1 cut(s) 1619
BbvI GCAGC 4 cut(s) 424, 1223, 1574, 1792
BccI CCATC 9 cut(s) 80, 171, 496, 568, 616, 781, 1363, 1372, 1492
BciT130I CCWGG 1 cut(s) 210
BciVI GTATCC 1 cut(s) 1604
BclI TGATCA 1 cut(s) 1936
BcoDI GTCTC 1 cut(s) 1699
BfuI GTATCC 1 cut(s) 1604
BglII AGATCT 1 cut(s) 1087
BisI GCNGC 4 cut(s) 438, 1212, 1563, 1781
BlsI GCNGC 4 cut(s) 439, 1213, 1564, 1782
Bme1390I CCNGG 1 cut(s) 210
Bme18I GGWCC 1 cut(s) 1372
BmeT110I CYCGRG 1 cut(s) 1028
BmgT120I GGNCC 1 cut(s) 1372
BmiI GGNNCC 2 cut(s) 522, 1035
BmrFI CCNGG 1 cut(s) 210
BmsI GCATC 6 cut(s) 895, 982, 991, 1254, 1276, 2029
BoxI GACNNNNGTC 1 cut(s) 198
Bpu10I CCTNAGC 1 cut(s) 1619
BpuEI CTTGAG 1 cut(s) 1636
BsaBI GATNNNNATC 1 cut(s) 1578
BsaJI CCNNGG 6 cut(s) 189, 1029, 1591, 1606, 1965, 2106
BsaWI WCCGGW 1 cut(s) 1374
BsaXI ACNNNNNCTCC 4 cut(s) 467, 497, 678, 708
Bsc4I CCNNNNNNNGG 6 cut(s) 471, 675, 751, 1597, 2049, 2107
Bse3DI GCAATG 3 cut(s) 476, 717, 915
Bse8I GATNNNNATC 1 cut(s) 1578
BseAI TCCGGA 1 cut(s) 1374
BseBI CCWGG 1 cut(s) 210
BseDI CCNNGG 6 cut(s) 189, 1029, 1591, 1606, 1965, 2106
BseGI GGATG 6 cut(s) 637, 910, 997, 1006, 1197, 1383
BseJI GATNNNNATC 1 cut(s) 1578
BseLI CCNNNNNNNGG 6 cut(s) 471, 675, 751, 1597, 2049, 2107
BseMI GCAATG 3 cut(s) 476, 717, 915
BseMII CTCAG 7 cut(s) 219, 1509, 1610, 1710, 1773, 1880, 2133
BseRI GAGGAG 3 cut(s) 1046, 1636, 1853
BseXI GCAGC 4 cut(s) 424, 1223, 1574, 1792
BseYI CCCAGC 1 cut(s) 221
BsgI GTGCAG 1 cut(s) 1095
BshFI GGCC 3 cut(s) 931, 1320, 1764
BshNI GGYRCC 1 cut(s) 520
BsiHKAI GWGCWC 3 cut(s) 217, 1515, 1558
BsiHKCI CYCGRG 1 cut(s) 1028
BsiSI CCGG 1 cut(s) 1375
BslI CCNNNNNNNGG 6 cut(s) 471, 675, 751, 1597, 2049, 2107
BsmAI GTCTC 1 cut(s) 1699
BsmI GAATGC 5 cut(s) 316, 850, 1753, 2059, 2091
BsnI GGCC 3 cut(s) 931, 1320, 1764
BsoBI CYCGRG 1 cut(s) 1028
Bsp1286I GDGCHC 3 cut(s) 217, 1515, 1558
Bsp13I TCCGGA 1 cut(s) 1374
Bsp143I GATC 5 cut(s) 1087, 1489, 1573, 1755, 1936
Bsp19I CCATGG 1 cut(s) 1606
BspACI CCGC 2 cut(s) 177, 692
BspANI GGCC 3 cut(s) 931, 1320, 1764
BspCNI CTCAG 7 cut(s) 220, 1510, 1611, 1709, 1772, 1881, 2134
BspEI TCCGGA 1 cut(s) 1374
BspLI GGNNCC 2 cut(s) 522, 1035
BspQI GCTCTTC 1 cut(s) 897
BspT107I GGYRCC 1 cut(s) 520
BsrDI GCAATG 3 cut(s) 476, 717, 915
BssECI CCNNGG 6 cut(s) 189, 1029, 1591, 1606, 1965, 2106
BssMI GATC 5 cut(s) 1087, 1489, 1573, 1755, 1936
BssT1I CCWWGG 4 cut(s) 1591, 1606, 1965, 2106
Bst2UI CCWGG 1 cut(s) 210
Bst4CI ACNGT 3 cut(s) 206, 424, 674
Bst6I CTCTTC 3 cut(s) 818, 897, 1894
BstAPI GCANNNNNTGC 1 cut(s) 1568
BstC8I GCNNGC 6 cut(s) 348, 915, 1057, 1078, 1318, 1956
BstDSI CCRYGG 1 cut(s) 1606
BstEII GGTNACC 1 cut(s) 260
BstF5I GGATG 6 cut(s) 637, 910, 997, 1006, 1197, 1383
BstHHI GCGC 2 cut(s) 565, 710
BstKTI GATC 5 cut(s) 1090, 1492, 1576, 1758, 1939
BstMAI GTCTC 1 cut(s) 1699
BstMBI GATC 5 cut(s) 1087, 1489, 1573, 1755, 1936
BstMWI GCNNNNNNNGC 9 cut(s) 167, 176, 185, 352, 914, 1001, 1322, 1562, 1568
BstNI CCWGG 1 cut(s) 210
BstNSI RCATGY 3 cut(s) 1672, 1780, 1978
BstPAI GACNNNNGTC 1 cut(s) 198
BstPI GGTNACC 1 cut(s) 260
BstSCI CCNGG 1 cut(s) 208
BstV1I GCAGC 4 cut(s) 424, 1223, 1574, 1792
BstX2I RGATCY 1 cut(s) 1087
BstYI RGATCY 1 cut(s) 1087
BsuI GTATCC 1 cut(s) 1604
BsuRI GGCC 3 cut(s) 931, 1320, 1764
BtgI CCRYGG 1 cut(s) 1606
BtgZI GCGATG 1 cut(s) 800
BtsCI GGATG 6 cut(s) 637, 910, 997, 1006, 1197, 1383
BtsI GCAGTG 1 cut(s) 238
BtsIMutI CAGTG 4 cut(s) 45, 238, 1847, 2019
Cac8I GCNNGC 6 cut(s) 348, 915, 1057, 1078, 1318, 1956
CaiI CAGNNNCTG 1 cut(s) 397
CfoI GCGC 2 cut(s) 565, 710
Cfr13I GGNCC 1 cut(s) 1372
CseI GACGC 1 cut(s) 1118
Csp6I GTAC 5 cut(s) 425, 1177, 1470, 1672, 1950
CviQI GTAC 5 cut(s) 425, 1177, 1470, 1672, 1950
DpnI GATC 5 cut(s) 1089, 1491, 1575, 1757, 1938
DpnII GATC 5 cut(s) 1087, 1489, 1573, 1755, 1936
EaeI YGGCCR 1 cut(s) 1318
Eam1104I CTCTTC 3 cut(s) 818, 897, 1894
EarI CTCTTC 3 cut(s) 818, 897, 1894
Ecl136II GAGCTC 1 cut(s) 215
Eco130I CCWWGG 4 cut(s) 1591, 1606, 1965, 2106
Eco24I GRGCYC 1 cut(s) 217
Eco32I GATATC 1 cut(s) 837
Eco47I GGWCC 1 cut(s) 1372
Eco53kI GAGCTC 1 cut(s) 215
Eco57I CTGAAG 1 cut(s) 1145
Eco88I CYCGRG 1 cut(s) 1028
Eco91I GGTNACC 1 cut(s) 260
EcoICRI GAGCTC 1 cut(s) 215
EcoO65I GGTNACC 1 cut(s) 260
EcoRI GAATTC 1 cut(s) 1222
EcoRII CCWGG 1 cut(s) 208
EcoRV GATATC 1 cut(s) 837
EcoT14I CCWWGG 4 cut(s) 1591, 1606, 1965, 2106
EcoT22I ATGCAT 1 cut(s) 1269
EcoT38I GRGCYC 1 cut(s) 217
ErhI CCWWGG 4 cut(s) 1591, 1606, 1965, 2106
FalI AAGNNNNNCTT 2 cut(s) 1812, 1844
FauNDI CATATG 1 cut(s) 1351
FbaI TGATCA 1 cut(s) 1936
FblI GTMKAC 1 cut(s) 280
Fnu4HI GCNGC 4 cut(s) 438, 1212, 1563, 1781
FokI GGATG 6 cut(s) 644, 917, 1004, 1013, 1204, 1390
FriOI GRGCYC 1 cut(s) 217
Fsp4HI GCNGC 4 cut(s) 438, 1212, 1563, 1781
GlaI GCGC 2 cut(s) 564, 709
GluI GCNGC 4 cut(s) 438, 1212, 1563, 1781
GsaI CCCAGC 1 cut(s) 225
HaeIII GGCC 3 cut(s) 931, 1320, 1764
HapII CCGG 1 cut(s) 1375
HgaI GACGC 1 cut(s) 1118
HhaI GCGC 2 cut(s) 565, 710
Hin6I GCGC 2 cut(s) 563, 708
HinP1I GCGC 2 cut(s) 563, 708
HincII GTYRAC 2 cut(s) 1666, 1771
HindII GTYRAC 2 cut(s) 1666, 1771
HindIII AAGCTT 2 cut(s) 344, 1452
HinfI GANTC 6 cut(s) 595, 626, 800, 954, 1520, 1927
HpaII CCGG 1 cut(s) 1375
HphI GGTGA 5 cut(s) 706, 823, 832, 1273, 1886
Hpy166II GTNNAC 4 cut(s) 281, 738, 1666, 1771
Hpy188III TCNNGA 5 cut(s) 1227, 1375, 1685, 1796, 1829
Hpy8I GTNNAC 4 cut(s) 281, 738, 1666, 1771
HpyAV CCTTC 8 cut(s) 49, 610, 802, 914, 1151, 1234, 1591, 1817
HpyCH4III ACNGT 3 cut(s) 206, 424, 674
HpyCH4IV ACGT 2 cut(s) 126, 1410
HpyF10VI GCNNNNNNNGC 9 cut(s) 167, 176, 185, 352, 914, 1001, 1322, 1562, 1568
HpySE526I ACGT 2 cut(s) 126, 1410
HspAI GCGC 2 cut(s) 563, 708
Kpn2I TCCGGA 1 cut(s) 1374
Ksp22I TGATCA 1 cut(s) 1936
Kzo9I GATC 5 cut(s) 1087, 1489, 1573, 1755, 1936
LguI GCTCTTC 1 cut(s) 897
LmnI GCTCC 4 cut(s) 4, 212, 1033, 1518
Lsp1109I GCAGC 4 cut(s) 424, 1223, 1574, 1792
LweI GCATC 6 cut(s) 895, 982, 991, 1254, 1276, 2029
MaeII ACGT 2 cut(s) 126, 1410
MaeIII GTNAC 4 cut(s) 200, 236, 260, 1045
MalI GATC 5 cut(s) 1089, 1491, 1575, 1757, 1938
MboI GATC 5 cut(s) 1087, 1489, 1573, 1755, 1936
MboII GAAGA 6 cut(s) 34, 583, 835, 884, 1832, 1911
MfeI CAATTG 2 cut(s) 1050, 1984
MflI RGATCY 1 cut(s) 1087
MhlI GDGCHC 3 cut(s) 217, 1515, 1558
MlsI TGGCCA 1 cut(s) 1320
MluNI TGGCCA 1 cut(s) 1320
MlyI GAGTC 4 cut(s) 809, 963, 1529, 1936
MmeI TCCRAC 2 cut(s) 1724, 2092
Mox20I TGGCCA 1 cut(s) 1320
Mph1103I ATGCAT 1 cut(s) 1269
MroI TCCGGA 1 cut(s) 1374
MroXI GAANNNNTTC 2 cut(s) 398, 1463
MscI TGGCCA 1 cut(s) 1320
MseI TTAA 6 cut(s) 149, 939, 1280, 1362, 1415, 2031
MslI CAYNNNNRTG 3 cut(s) 809, 1272, 1850
Msp20I TGGCCA 1 cut(s) 1320
MspA1I CMGCKG 1 cut(s) 1783
MspI CCGG 1 cut(s) 1375
MspR9I CCNGG 1 cut(s) 210
MunI CAATTG 2 cut(s) 1050, 1984
Mva1269I GAATGC 5 cut(s) 316, 850, 1753, 2059, 2091
MvaI CCWGG 1 cut(s) 210
MwoI GCNNNNNNNGC 9 cut(s) 167, 176, 185, 352, 914, 1001, 1322, 1562, 1568
NcoI CCATGG 1 cut(s) 1606
NdeI CATATG 1 cut(s) 1351
NdeII GATC 5 cut(s) 1087, 1489, 1573, 1755, 1936
NlaIV GGNNCC 2 cut(s) 522, 1035
NmeAIII GCCGAG 2 cut(s) 490, 957
NmuCI GTSAC 2 cut(s) 200, 236
NsiI ATGCAT 1 cut(s) 1269
NspI RCATGY 3 cut(s) 1672, 1780, 1978
PciI ACATGT 1 cut(s) 1668
PciSI GCTCTTC 1 cut(s) 897
PctI GAATGC 5 cut(s) 316, 850, 1753, 2059, 2091
PdmI GAANNNNTTC 2 cut(s) 398, 1463
PfeI GAWTC 2 cut(s) 595, 626
PflMI CCANNNNNTGG 1 cut(s) 2049
PfoI TCCNGGA 1 cut(s) 208
PkrI GCNGC 4 cut(s) 439, 1213, 1564, 1782
PleI GAGTC 4 cut(s) 808, 962, 1528, 1935
PpsI GAGTC 4 cut(s) 808, 962, 1528, 1935
PscI ACATGT 1 cut(s) 1668
PshAI GACNNNNGTC 1 cut(s) 198
PsiI TTATAA 1 cut(s) 1011
Psp124BI GAGCTC 1 cut(s) 217
Psp1406I AACGTT 2 cut(s) 126, 1410
Psp6I CCWGG 1 cut(s) 208
PspEI GGTNACC 1 cut(s) 260
PspFI CCCAGC 1 cut(s) 221
PspGI CCWGG 1 cut(s) 208
PspN4I GGNNCC 2 cut(s) 522, 1035
PspPI GGNCC 1 cut(s) 1372
PstNI CAGNNNCTG 1 cut(s) 397
PsuI RGATCY 1 cut(s) 1087
PvuII CAGCTG 1 cut(s) 1783
RsaI GTAC 5 cut(s) 426, 1178, 1471, 1673, 1951
RsaNI GTAC 5 cut(s) 425, 1177, 1470, 1672, 1950
RseI CAYNNNNRTG 3 cut(s) 809, 1272, 1850
SacI GAGCTC 1 cut(s) 217
SapI GCTCTTC 1 cut(s) 897
SaqAI TTAA 6 cut(s) 149, 939, 1280, 1362, 1415, 2031
SatI GCNGC 4 cut(s) 438, 1212, 1563, 1781
Sau3AI GATC 5 cut(s) 1087, 1489, 1573, 1755, 1936
Sau96I GGNCC 1 cut(s) 1372
SchI GAGTC 4 cut(s) 809, 963, 1529, 1936
ScrFI CCNGG 1 cut(s) 210
SduI GDGCHC 3 cut(s) 217, 1515, 1558
SfaNI GCATC 6 cut(s) 895, 982, 991, 1254, 1276, 2029
SinI GGWCC 1 cut(s) 1372
SmiMI CAYNNNNRTG 3 cut(s) 809, 1272, 1850
SmlI CTYRAG 1 cut(s) 1651
SmoI CTYRAG 1 cut(s) 1651
SsiI CCGC 2 cut(s) 177, 692
SspI AATATT 3 cut(s) 983, 1311, 1396
SstI GAGCTC 1 cut(s) 217
StyD4I CCNGG 1 cut(s) 208
StyI CCWWGG 4 cut(s) 1591, 1606, 1965, 2106
TaaI ACNGT 3 cut(s) 206, 424, 674
TaiI ACGT 2 cut(s) 129, 1413
TaqI TCGA 1 cut(s) 1676
TatI WGTACW 2 cut(s) 1176, 1671
TfiI GAWTC 2 cut(s) 595, 626
Tru1I TTAA 6 cut(s) 149, 939, 1280, 1362, 1415, 2031
Tru9I TTAA 6 cut(s) 149, 939, 1280, 1362, 1415, 2031
TscAI CASTG 4 cut(s) 52, 245, 1854, 2019
TseFI GTSAC 2 cut(s) 200, 236
TseI GCWGC 4 cut(s) 437, 1211, 1562, 1780
Tsp45I GTSAC 2 cut(s) 200, 236
TspDTI ATGAA 8 cut(s) 278, 587, 776, 821, 993, 1100, 1152, 1208
TspRI CASTG 4 cut(s) 52, 245, 1854, 2019
Van91I CCANNNNNTGG 1 cut(s) 2049
VpaK11BI GGWCC 1 cut(s) 1372
XapI RAATTY 7 cut(s) 92, 98, 285, 1039, 1093, 1222, 1534
XceI RCATGY 3 cut(s) 1672, 1780, 1978
XcmI CCANNNNNNNNNTGG 1 cut(s) 1328
XmiI GTMKAC 1 cut(s) 280
XmnI GAANNNNTTC 2 cut(s) 398, 1463
Zsp2I ATGCAT 1 cut(s) 1269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.