Rh7BG463800

Pentatricopeptide repeat-containing protein At1g19720-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0012631
Physical Location & Seq
Forward (+)
54955292 .. 54957496
2205 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG463800.1

Sequence Viewer

Length: 2205 bp
ATGGTGCTTCTTCGTTCTGCTTTGCTTCCCACCACTCCCTTCTTCACTGACCCCTCTCCCTCACAAACACCCATCAATCCTCACACACCCAAATTCAAATTCCGAGCTTCCATAGACACCACCAACGTTCCCACCACCCCCACACTCTTAAACCCACAAGCCCATCTCGCTTTTACCGCCAAAAAAGCCTCAGACTTTAGTCACAGTCCAGGAGCTCAACCCAGCTCTGAGGTTAGTCACTGCATTTCTTTACTTAGAGGTAACCATGTAGCTGATTGTAGACAAATTCATGCTCTTGCTTTGAAATTGAATGCTTTTGAAGTGAATAGTTGGGTAGGAAATAAGCTTGCTATGCTTTACTCCAAGAACTATGAGCTTTTAGACTATGCCCAGAAGCTGTTTTATGAAATGCCTAAGAGAACAGTACCCACTTACGCAGCTTTGATTAGTGCGTATTGTCGTGCCGAGCAATGGGAGGATATGTTCTTGGTGTTTAGGTTAATGGTTGATGAGGGAATGGTGCCTGATGTGTATGTTGTGCCTACACTTTTGAAAGCGTGTGCGCTGACGAAGATGGTGGGGATTGGGAAAATGATTCATGGGTTTGTGATAAGGAAGGAGATGGATTCGGATGTTTTTGTGGGTAATTCGCTTATAGATTTTTATGCCAACTGTGGGGATTTGGGAGTTGCGGTGAGTGTGTTTGGCGCAATGAGGGAAAGAGATGTGGTTTCGTGGACTGCCCTTGTTTCGGCTTATATGAATGAGGGTCTTTTTGAGGAAGCGATGGAGGTTTTTGATTCCATGAAGGTGAATGGGGTGAAGAGGGATTTGATATCTTGGAATGCTCTTGTTTCGGGGTTTGCACAGAATGGGGAGATTGATTTGGCTCTTCGGTATTTGGAGGCAATGCAAGAGGAAGGGTTAAGGCCAAGAGTTAATTCTTGGAATGGAGTCATTTCGGGCTGTATTCAGAATGAGTATTTTGAGGATGCTTTGGATGCGTTTTATAAAATGTTGTGTTTCCCTGAGGAGCCGAATTTTGTTACAATTGCAAGCATTTTACCAGCTTGTGCAGGCTTGAAAGATCTGAACTTAGGCAGGGCAATTCATGGATTTTCTCTGAAGCGTCAGCTTTGCAGTAATACTCATGTGGAAGGTTCATTGATTGGTATGTACTCAAAATGTGGGATGAAAGATTATGCAGAGAAAGTTTTTTCCATGGCTGAGACCAAAAGCATTGGTATGTGGAATGAGATGATTGCAGCTTATGTGAATTCAGGAGAAACAGAGAAGGGAATAGAGCTTCTAAGGGTGATGCATCATCATGGCTTAAAACCTGATGTGGTGTCCTATAACACAATATTGGCTGGCCATGCAAGAAATGGGCAAAAGAATGAGGCATATGAGTTGCTTAATGAGATGGTCCGGATGGATTTGAAACCAAATATTATCTCTTTCAACGTTTTAATTTCTGGTTTTCAACAATTTGGGCTTAGTTTTGAAGCTTTGAAATTGTTCTGTACCATGCAATTCCCATCTGATCGTTCCTTTGCTGATTTTGTGCTCGCTGAGTCAATCCAACCAAATACCATTACTATTGCTGGTGCTCTTGCAGCTTGTGCTGATCTCAATCTACTATCCCAAGGGAAGGAAATCCATGGATACACGCTGAGGAGTGGCTTTGAGCCTAATGTCTATATCTCAAGTACATTGGTTGACATGTACTCGAAATGTCTGGATATTGTCTCAGCAACGAATGTATTTAGGAGAATTGAGGACAGAAACACAATCTGTTGGAATGCTATGATCGCAGGCCATGTCAACAACATGCAGCTGAACTTAGCTCTTGAACATTTCTGCGAAATGCTGGAAGAAGGTCTTGAACCAAGCTCTATCACACTCATGATACTTCTCCTCACTTGTGGTGATATGACAGCTCTGAGATTTGGAAGAGAATTACATGGATATATCATAAAGAGTCAGCTTGATCAGTCTGATAGTACGCTTGCAAGTGCCTTGGTAGGCATGTATGCCAAGTGTGGTAGTATCAAGGAAGCTAAATCAGTGTTTGACTTAGAAGTTAAAAAAGATGCCTTGCTGTGGAATGCCATGTTATCTGCTTATTCAACTAATGGAATGCTCAATAATGCCCTTGCCTTGGTTGGACAAATGGAGTTGGTGGGCGTTGTGCCTGAGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

734

Amino Acids

81.41

Weight (kDa)

5.48

Isoelectric Point (pI)

35.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 141 - 188 8.4e-08 PPR repeat family
PPR_2 PF13041 241 - 277 2.4e-08 PPR repeat family
PPR_3 PF13812 242 - 284 6.6e-06 Pentatricopeptide repeat domain
PPR PF01535 244 - 274 6e-08 PPR repeat
TPR_24 PF23276 246 - 336 1.4e-06 Fungal tetratrico peptide repeats
PPR_3 PF13812 269 - 323 4.2e-07 Pentatricopeptide repeat domain
PPR PF01535 279 - 309 5.8e-06 PPR repeat
PPR_2 PF13041 414 - 453 6.9e-07 PPR repeat family
TPR_24 PF23276 417 - 507 5.8e-06 Fungal tetratrico peptide repeats
PPR_3 PF13812 436 - 492 1.4e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 444 - 476 1.2e-09 PPR repeat
PPR_2 PF13041 447 - 494 1.6e-15 PPR repeat family
PPR PF01535 450 - 479 6.3e-06 PPR repeat
PPR_2 PF13041 596 - 640 7.3e-09 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1011
AccB1I GGYRCC 1 cut(s) 520
AccI GTMKAC 1 cut(s) 280
AccIII TCCGGA 1 cut(s) 1428
AciI CCGC 2 cut(s) 177, 692
AclI AACGTT 2 cut(s) 126, 1464
AcoI YGGCCR 1 cut(s) 1372
AcsI RAATTY 5 cut(s) 92, 98, 285, 1039, 1276
AcuI CTGAAG 1 cut(s) 1145
AfaI GTAC 6 cut(s) 426, 1178, 1525, 1711, 1727, 2005
AfiI CCNNNNNNNGG 6 cut(s) 471, 675, 751, 1651, 2103, 2161
AflIII ACRYGT 1 cut(s) 1722
AjnI CCWGG 1 cut(s) 208
AjuI GAANNNNNNNTTGG 4 cut(s) 83, 115, 925, 957
AloI GAACNNNNNNTCC 2 cut(s) 467, 499
Alw21I GWGCWC 3 cut(s) 217, 1569, 1612
Alw26I GTCTC 2 cut(s) 1223, 1753
AlwNI CAGNNNCTG 1 cut(s) 397
Aor13HI TCCGGA 1 cut(s) 1428
AoxI GGCC 3 cut(s) 929, 1372, 1816
ApeKI GCWGC 4 cut(s) 437, 1265, 1616, 1834
ApoI RAATTY 5 cut(s) 92, 98, 285, 1039, 1276
Asp700I GAANNNNTTC 1 cut(s) 1517
AspLEI GCGC 2 cut(s) 565, 710
AspS9I GGNCC 1 cut(s) 1426
AsuHPI GGTGA 5 cut(s) 706, 823, 832, 1327, 1940
AvaII GGWCC 1 cut(s) 1426
AxyI CCTNAGG 1 cut(s) 1029
BalI TGGCCA 1 cut(s) 1374
BanI GGYRCC 1 cut(s) 520
BanII GRGCYC 1 cut(s) 217
Bbv12I GWGCWC 3 cut(s) 217, 1569, 1612
BbvCI CCTCAGC 1 cut(s) 1673
BbvI GCAGC 4 cut(s) 449, 1277, 1628, 1846
BccI CCATC 8 cut(s) 80, 171, 568, 616, 781, 1417, 1426, 1546
BciT130I CCWGG 1 cut(s) 210
BciVI GTATCC 1 cut(s) 1658
BclI TGATCA 1 cut(s) 1990
BcoDI GTCTC 2 cut(s) 1223, 1753
BfuI GTATCC 1 cut(s) 1658
BglII AGATCT 1 cut(s) 1087
BisI GCNGC 4 cut(s) 438, 1266, 1617, 1835
BlsI GCNGC 4 cut(s) 439, 1267, 1618, 1836
Bme1390I CCNGG 1 cut(s) 210
Bme18I GGWCC 1 cut(s) 1426
BmgT120I GGNCC 1 cut(s) 1426
BmiI GGNNCC 2 cut(s) 522, 1035
BmrFI CCNGG 1 cut(s) 210
BmsI GCATC 5 cut(s) 982, 991, 1308, 1330, 2083
BoxI GACNNNNGTC 1 cut(s) 198
Bpu10I CCTNAGC 1 cut(s) 1673
BpuEI CTTGAG 1 cut(s) 1690
BsaBI GATNNNNATC 1 cut(s) 1632
BsaI GGTCTC 1 cut(s) 1223
BsaJI CCNNGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
BsaWI WCCGGW 1 cut(s) 1428
BsaXI ACNNNNNCTCC 4 cut(s) 467, 497, 678, 708
Bsc4I CCNNNNNNNGG 6 cut(s) 471, 675, 751, 1651, 2103, 2161
Bse21I CCTNAGG 1 cut(s) 1029
Bse3DI GCAATG 3 cut(s) 476, 717, 915
Bse8I GATNNNNATC 1 cut(s) 1632
BseAI TCCGGA 1 cut(s) 1428
BseBI CCWGG 1 cut(s) 210
BseDI CCNNGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
BseGI GGATG 5 cut(s) 637, 997, 1006, 1197, 1437
BseJI GATNNNNATC 1 cut(s) 1632
BseLI CCNNNNNNNGG 6 cut(s) 471, 675, 751, 1651, 2103, 2161
BseMI GCAATG 3 cut(s) 476, 717, 915
BseMII CTCAG 9 cut(s) 204, 219, 1020, 1218, 1563, 1664, 1764, 1934, 2187
BseRI GAGGAG 3 cut(s) 1046, 1690, 1907
BseXI GCAGC 4 cut(s) 449, 1277, 1628, 1846
BseYI CCCAGC 1 cut(s) 221
BsgI GTGCAG 1 cut(s) 1095
BshFI GGCC 3 cut(s) 931, 1374, 1818
BshNI GGYRCC 1 cut(s) 520
BsiHKAI GWGCWC 3 cut(s) 217, 1569, 1612
BsiSI CCGG 1 cut(s) 1429
BslI CCNNNNNNNGG 6 cut(s) 471, 675, 751, 1651, 2103, 2161
BsmAI GTCTC 2 cut(s) 1223, 1753
BsmI GAATGC 5 cut(s) 316, 850, 1807, 2113, 2145
BsnI GGCC 3 cut(s) 931, 1374, 1818
Bso31I GGTCTC 1 cut(s) 1223
Bsp1286I GDGCHC 3 cut(s) 217, 1569, 1612
Bsp13I TCCGGA 1 cut(s) 1428
Bsp143I GATC 5 cut(s) 1087, 1543, 1627, 1809, 1990
Bsp19I CCATGG 2 cut(s) 1221, 1660
BspACI CCGC 2 cut(s) 177, 692
BspANI GGCC 3 cut(s) 931, 1374, 1818
BspCNI CTCAG 9 cut(s) 203, 220, 1021, 1219, 1564, 1665, 1763, 1935, 2188
BspEI TCCGGA 1 cut(s) 1428
BspHI TCATGA 1 cut(s) 1905
BspLI GGNNCC 2 cut(s) 522, 1035
BspQI GCTCTTC 1 cut(s) 897
BspT107I GGYRCC 1 cut(s) 520
BspTNI GGTCTC 1 cut(s) 1223
BsrDI GCAATG 3 cut(s) 476, 717, 915
BssECI CCNNGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
BssMI GATC 5 cut(s) 1087, 1543, 1627, 1809, 1990
BssT1I CCWWGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
Bst2UI CCWGG 1 cut(s) 210
Bst4CI ACNGT 3 cut(s) 206, 424, 674
Bst6I CTCTTC 3 cut(s) 818, 897, 1948
BstAPI GCANNNNNTGC 1 cut(s) 1622
BstC8I GCNNGC 7 cut(s) 348, 1057, 1078, 1372, 1569, 1816, 2010
BstDSI CCRYGG 2 cut(s) 1221, 1660
BstEII GGTNACC 1 cut(s) 260
BstF5I GGATG 5 cut(s) 637, 997, 1006, 1197, 1437
BstHHI GCGC 2 cut(s) 565, 710
BstKTI GATC 5 cut(s) 1090, 1546, 1630, 1812, 1993
BstMAI GTCTC 2 cut(s) 1223, 1753
BstMBI GATC 5 cut(s) 1087, 1543, 1627, 1809, 1990
BstMWI GCNNNNNNNGC 9 cut(s) 167, 176, 185, 352, 1001, 1376, 1616, 1622, 1811
BstNI CCWGG 1 cut(s) 210
BstNSI RCATGY 3 cut(s) 1726, 1834, 2032
BstPAI GACNNNNGTC 1 cut(s) 198
BstPI GGTNACC 1 cut(s) 260
BstSCI CCNGG 1 cut(s) 208
BstV1I GCAGC 4 cut(s) 449, 1277, 1628, 1846
BstX2I RGATCY 1 cut(s) 1087
BstYI RGATCY 1 cut(s) 1087
Bsu36I CCTNAGG 1 cut(s) 1029
BsuI GTATCC 1 cut(s) 1658
BsuRI GGCC 3 cut(s) 931, 1374, 1818
BtgI CCRYGG 2 cut(s) 1221, 1660
BtgZI GCGATG 1 cut(s) 800
BtsCI GGATG 5 cut(s) 637, 997, 1006, 1197, 1437
BtsI GCAGTG 1 cut(s) 238
BtsIMutI CAGTG 3 cut(s) 45, 238, 2073
Cac8I GCNNGC 7 cut(s) 348, 1057, 1078, 1372, 1569, 1816, 2010
CaiI CAGNNNCTG 1 cut(s) 397
CciI TCATGA 1 cut(s) 1905
CfoI GCGC 2 cut(s) 565, 710
Cfr13I GGNCC 1 cut(s) 1426
CseI GACGC 1 cut(s) 1118
Csp6I GTAC 6 cut(s) 425, 1177, 1524, 1710, 1726, 2004
CviQI GTAC 6 cut(s) 425, 1177, 1524, 1710, 1726, 2004
DpnI GATC 5 cut(s) 1089, 1545, 1629, 1811, 1992
DpnII GATC 5 cut(s) 1087, 1543, 1627, 1809, 1990
EaeI YGGCCR 1 cut(s) 1372
Eam1104I CTCTTC 3 cut(s) 818, 897, 1948
EarI CTCTTC 3 cut(s) 818, 897, 1948
Ecl136II GAGCTC 1 cut(s) 215
Eco130I CCWWGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
Eco24I GRGCYC 1 cut(s) 217
Eco31I GGTCTC 1 cut(s) 1223
Eco32I GATATC 1 cut(s) 837
Eco47I GGWCC 1 cut(s) 1426
Eco53kI GAGCTC 1 cut(s) 215
Eco57I CTGAAG 1 cut(s) 1145
Eco81I CCTNAGG 1 cut(s) 1029
Eco91I GGTNACC 1 cut(s) 260
EcoICRI GAGCTC 1 cut(s) 215
EcoO65I GGTNACC 1 cut(s) 260
EcoRI GAATTC 1 cut(s) 1276
EcoRII CCWGG 1 cut(s) 208
EcoRV GATATC 1 cut(s) 837
EcoT14I CCWWGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
EcoT22I ATGCAT 1 cut(s) 1323
EcoT38I GRGCYC 1 cut(s) 217
ErhI CCWWGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
FalI AAGNNNNNCTT 2 cut(s) 1866, 1898
FauNDI CATATG 1 cut(s) 1405
FbaI TGATCA 1 cut(s) 1990
FblI GTMKAC 1 cut(s) 280
Fnu4HI GCNGC 4 cut(s) 438, 1266, 1617, 1835
FokI GGATG 5 cut(s) 644, 1004, 1013, 1204, 1444
FriOI GRGCYC 1 cut(s) 217
Fsp4HI GCNGC 4 cut(s) 438, 1266, 1617, 1835
GlaI GCGC 2 cut(s) 564, 709
GluI GCNGC 4 cut(s) 438, 1266, 1617, 1835
GsaI CCCAGC 1 cut(s) 225
HaeIII GGCC 3 cut(s) 931, 1374, 1818
HapII CCGG 1 cut(s) 1429
HgaI GACGC 1 cut(s) 1118
HhaI GCGC 2 cut(s) 565, 710
Hin6I GCGC 2 cut(s) 563, 708
HinP1I GCGC 2 cut(s) 563, 708
HincII GTYRAC 2 cut(s) 1720, 1825
HindII GTYRAC 2 cut(s) 1720, 1825
HindIII AAGCTT 2 cut(s) 344, 1506
HinfI GANTC 6 cut(s) 595, 626, 800, 954, 1574, 1981
HpaII CCGG 1 cut(s) 1429
HphI GGTGA 5 cut(s) 706, 823, 832, 1327, 1940
Hpy166II GTNNAC 4 cut(s) 281, 738, 1720, 1825
Hpy188III TCNNGA 6 cut(s) 1281, 1429, 1739, 1850, 1883, 1906
Hpy8I GTNNAC 4 cut(s) 281, 738, 1720, 1825
HpyAV CCTTC 8 cut(s) 49, 610, 802, 914, 1151, 1288, 1645, 1871
HpyCH4III ACNGT 3 cut(s) 206, 424, 674
HpyCH4IV ACGT 2 cut(s) 126, 1464
HpyF10VI GCNNNNNNNGC 9 cut(s) 167, 176, 185, 352, 1001, 1376, 1616, 1622, 1811
HpySE526I ACGT 2 cut(s) 126, 1464
HspAI GCGC 2 cut(s) 563, 708
Kpn2I TCCGGA 1 cut(s) 1428
Ksp22I TGATCA 1 cut(s) 1990
Kzo9I GATC 5 cut(s) 1087, 1543, 1627, 1809, 1990
LguI GCTCTTC 1 cut(s) 897
LmnI GCTCC 2 cut(s) 212, 1033
Lsp1109I GCAGC 4 cut(s) 449, 1277, 1628, 1846
LweI GCATC 5 cut(s) 982, 991, 1308, 1330, 2083
MaeII ACGT 2 cut(s) 126, 1464
MaeIII GTNAC 4 cut(s) 200, 236, 260, 1045
MalI GATC 5 cut(s) 1089, 1545, 1629, 1811, 1992
MboI GATC 5 cut(s) 1087, 1543, 1627, 1809, 1990
MboII GAAGA 6 cut(s) 34, 583, 835, 884, 1886, 1965
MfeI CAATTG 1 cut(s) 1050
MflI RGATCY 1 cut(s) 1087
MhlI GDGCHC 3 cut(s) 217, 1569, 1612
MlsI TGGCCA 1 cut(s) 1374
MluNI TGGCCA 1 cut(s) 1374
MlyI GAGTC 3 cut(s) 963, 1583, 1990
MmeI TCCRAC 3 cut(s) 1606, 1778, 2146
Mox20I TGGCCA 1 cut(s) 1374
Mph1103I ATGCAT 1 cut(s) 1323
MroI TCCGGA 1 cut(s) 1428
MroXI GAANNNNTTC 1 cut(s) 1517
MscI TGGCCA 1 cut(s) 1374
MseI TTAA 8 cut(s) 149, 500, 926, 939, 1334, 1416, 1469, 2085
MslI CAYNNNNRTG 4 cut(s) 809, 1244, 1326, 1904
Msp20I TGGCCA 1 cut(s) 1374
MspA1I CMGCKG 1 cut(s) 1837
MspI CCGG 1 cut(s) 1429
MspR9I CCNGG 1 cut(s) 210
MunI CAATTG 1 cut(s) 1050
Mva1269I GAATGC 5 cut(s) 316, 850, 1807, 2113, 2145
MvaI CCWGG 1 cut(s) 210
MwoI GCNNNNNNNGC 9 cut(s) 167, 176, 185, 352, 1001, 1376, 1616, 1622, 1811
NcoI CCATGG 2 cut(s) 1221, 1660
NdeI CATATG 1 cut(s) 1405
NdeII GATC 5 cut(s) 1087, 1543, 1627, 1809, 1990
NlaIV GGNNCC 2 cut(s) 522, 1035
NmeAIII GCCGAG 1 cut(s) 490
NmuCI GTSAC 2 cut(s) 200, 236
NsiI ATGCAT 1 cut(s) 1323
NspI RCATGY 3 cut(s) 1726, 1834, 2032
PagI TCATGA 1 cut(s) 1905
PciI ACATGT 1 cut(s) 1722
PciSI GCTCTTC 1 cut(s) 897
PctI GAATGC 5 cut(s) 316, 850, 1807, 2113, 2145
PdmI GAANNNNTTC 1 cut(s) 1517
PfeI GAWTC 3 cut(s) 595, 626, 800
PfoI TCCNGGA 1 cut(s) 208
PkrI GCNGC 4 cut(s) 439, 1267, 1618, 1836
PleI GAGTC 3 cut(s) 962, 1582, 1989
PpsI GAGTC 3 cut(s) 962, 1582, 1989
PscI ACATGT 1 cut(s) 1722
PshAI GACNNNNGTC 1 cut(s) 198
PsiI TTATAA 1 cut(s) 1011
Psp124BI GAGCTC 1 cut(s) 217
Psp1406I AACGTT 2 cut(s) 126, 1464
Psp6I CCWGG 1 cut(s) 208
PspEI GGTNACC 1 cut(s) 260
PspFI CCCAGC 1 cut(s) 221
PspGI CCWGG 1 cut(s) 208
PspN4I GGNNCC 2 cut(s) 522, 1035
PspPI GGNCC 1 cut(s) 1426
PstNI CAGNNNCTG 1 cut(s) 397
PsuI RGATCY 1 cut(s) 1087
PvuII CAGCTG 1 cut(s) 1837
RsaI GTAC 6 cut(s) 426, 1178, 1525, 1711, 1727, 2005
RsaNI GTAC 6 cut(s) 425, 1177, 1524, 1710, 1726, 2004
RseI CAYNNNNRTG 4 cut(s) 809, 1244, 1326, 1904
SacI GAGCTC 1 cut(s) 217
SapI GCTCTTC 1 cut(s) 897
SaqAI TTAA 8 cut(s) 149, 500, 926, 939, 1334, 1416, 1469, 2085
SatI GCNGC 4 cut(s) 438, 1266, 1617, 1835
Sau3AI GATC 5 cut(s) 1087, 1543, 1627, 1809, 1990
Sau96I GGNCC 1 cut(s) 1426
SchI GAGTC 3 cut(s) 963, 1583, 1990
ScrFI CCNGG 1 cut(s) 210
SduI GDGCHC 3 cut(s) 217, 1569, 1612
SfaNI GCATC 5 cut(s) 982, 991, 1308, 1330, 2083
SinI GGWCC 1 cut(s) 1426
SmiMI CAYNNNNRTG 4 cut(s) 809, 1244, 1326, 1904
SmlI CTYRAG 1 cut(s) 1705
SmoI CTYRAG 1 cut(s) 1705
SsiI CCGC 2 cut(s) 177, 692
SspI AATATT 2 cut(s) 1365, 1450
SstI GAGCTC 1 cut(s) 217
StyD4I CCNGG 1 cut(s) 208
StyI CCWWGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
TaaI ACNGT 3 cut(s) 206, 424, 674
TaiI ACGT 2 cut(s) 129, 1467
TaqI TCGA 1 cut(s) 1730
TatI WGTACW 3 cut(s) 1176, 1709, 1725
TfiI GAWTC 3 cut(s) 595, 626, 800
Tru1I TTAA 8 cut(s) 149, 500, 926, 939, 1334, 1416, 1469, 2085
Tru9I TTAA 8 cut(s) 149, 500, 926, 939, 1334, 1416, 1469, 2085
TscAI CASTG 3 cut(s) 52, 245, 2073
TseFI GTSAC 2 cut(s) 200, 236
TseI GCWGC 4 cut(s) 437, 1265, 1616, 1834
Tsp45I GTSAC 2 cut(s) 200, 236
TspDTI ATGAA 8 cut(s) 278, 420, 587, 776, 821, 1100, 1152, 1208
TspRI CASTG 3 cut(s) 52, 245, 2073
VpaK11BI GGWCC 1 cut(s) 1426
XapI RAATTY 5 cut(s) 92, 98, 285, 1039, 1276
XceI RCATGY 3 cut(s) 1726, 1834, 2032
XcmI CCANNNNNNNNNTGG 1 cut(s) 1382
XmiI GTMKAC 1 cut(s) 280
XmnI GAANNNNTTC 1 cut(s) 1517
Zsp2I ATGCAT 1 cut(s) 1323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.