Rroxscaffold_3G00219910

Pentatricopeptide repeat-containing protein At1g19720-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0012631
Physical Location & Seq
Reverse (-)
2105915 .. 2109430
3516 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00219910.1

Sequence Viewer

Length: 2205 bp
ATGGAGCTTCTTCGTTCTGCTTTGCTTCCCACCACTCCCTTCTTCACCGACCCCTCTCCTTCTCAAACACCCATCAATCCCCACACACCCAAATTCAAATTCCGAGCTTCCATAGACACCACCAACGTTCCCACCACCCCCACACTCTTAAACCCACAAGCTCATCTCGCTTTTACCGCCAAAAAAGCCTCAGACTTTGGTGCCAGTCCAGGAGCTCAACCCAGCTCTGAGGTTAGTCACTGCATTTCTTTACTTAGAGGTAACCATGTAGCTGATTGTAGACAAATTCATGCTCTTGCTTTGAAGTTAAATGCTTTCGAAGTGAATAGTTGGGTAGGAAACAAGCTTGCTATGCTTTACTCCAAGAACTATGAGCTTTTAGACTATGCCCAGAAGCTGTTTTATGAAATGCCTAAGAGAACAGTACCCACTTACGCAGCTTTGATTAGTGCGTATTGTCGCTCCGAGCAATGGGAGGATCTGTTCTTGGTGTTTAGGTTAATGGTTGATGAGGGAATGGTGCCTGATGTGTATGTTGTGCCTACACTATTGAAAGCGTGTGCGCTGACGAAAATGGTGGGCATTGGGAGAATGATTCATGGGTTTGTGATAAGGAAGGAGATGGATTCGGATGTTTTTGTGGGTAATTCGCTTGTAGATTTTTATGCCAACTGCGGGGATTTGGGAGTTGCGGTGCGTGTGTTTGGTGCAATGAGGGAAAGAGATGTGGTTTCGTGGACTGCTCTTGTTTCGGCTTACATGAATGAGGGTCTTTTTGAGGAAGCGATGGAGGTTTTTGATTCCATGAAGGTGAATGGGGTGAAGAGGGATTTGATATCTTGGAATGCTCTTGTTTCGGGGTTTGCACAGAATGGGGAGATTGATTTGGCTCTTCGGTATTTGGAGGCAATGCAAGAAGAAGGGTTGAGGCCGAGAGTTAATTCTTGGAATGGAATCATTTCGGGCTGTATTCAGAATGAATATTTTGAGGATGCTTTGGATGCGTTTTATAAAATGTTGTGTTTCCCCGATGGGCCGAATTTTGTTACAATTGCAAGCATTTTACCAGCTTGTGCAGGCTTGAAGAATCTGAATTTAGGCAGGGCAATTCATGGATTTTCTCTGAAGCATCAGCTTTGCGGTAATACTCATGTGGAAGGTTCTTTGATTGGTATGTACTCAAAATGTGGGATGAAAGATTATGCAGAGAAAGTTTTTTCCATGGCCGAGACCAAAAGCATTGGAATGTGGAATGAGATGAGTGCAGCTTATGTGAATGCAGGAGAAACAGAGAAGGGAATAGAGATCCTAAGGGTGATGCGTCATCATGGCTTAAAACCTGATGTGGTGTCCTATAACACAATATTGGCTGGCCATGCAAGAAATGGGCAAAAGAATGAGGCATATGAGTTGCTTAATGAGATGGTCCGGATGGATTTGAAACCAAATATTATCTCTTTCAACGTTTTAATTTCTGGTTTTCAACAATTTGGGCTTAGTTTTGAAGCTTTGAAATTGTTCTGTACCATGCAATCCCCATCTGATGGTTGCTTTGCTGATTTTGTGCTCCCTGAGTCAATCCAACCCAATTCCATTACTATTGCTGGTGCTCTTGCAGCTTGTGCTGATCTCAATCTACTATCCCAAGGGAAGGAAATCCATGGATACATGCTGAGGAGTGGCTTTGAGCCTAATGTCTATATCTCAAGTGCATTGGTTGACATGTACTCGAAATGTCTTGATAGTGTCTCAGCAACGAAAGTATTTAGGAGAATTGAGGACAAAAACACAATCTGTTGGAATGCTATGATCGCAGGCCATGTCAACAACATGCAGCTGAACTTAGCTCTTGAACTTTTCTGCGAAATGCTGGAAGAAGGTCTTGAACCAAGCTGTATTACACTCATGATACTTCTCCTCACTTGCGGTGATATGACAGCTCTGAGATTTGGAAGAGAATTACATGGATATATCATAAAGAGTCAGCTTGATCAGTCTGATAGTACGCTTGCAAGTGCCTTGGTAGGCATGTATGCTAAGTGTGGTAGTATCAAGGAAGCTAAATCAGTGTTTGACTTAGAAGTTAAAAAAGATGCTTTGCTGTGGAATGCCATGTTATCCGCTTATTCAACTAATGGAATGCTCAACAATGCCCTTGCCTTGGTTGGACAAATGGAGGTGGTGGGCGTTGTGCCTGAGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

734

Amino Acids

81.09

Weight (kDa)

5.5

Isoelectric Point (pI)

36.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 141 - 188 3.1e-07 PPR repeat family
PPR_2 PF13041 241 - 277 2.4e-08 PPR repeat family
PPR_3 PF13812 242 - 284 6.6e-06 Pentatricopeptide repeat domain
PPR PF01535 244 - 274 6e-08 PPR repeat
TPR_24 PF23276 257 - 338 2.4e-06 Fungal tetratrico peptide repeats
PPR_3 PF13812 269 - 323 7.5e-08 Pentatricopeptide repeat domain
PPR PF01535 279 - 309 5.8e-06 PPR repeat
PPR_3 PF13812 436 - 492 9.7e-12 Pentatricopeptide repeat domain
PPR_1 PF12854 444 - 476 1.2e-09 PPR repeat
PPR_2 PF13041 447 - 494 1.6e-15 PPR repeat family
PPR PF01535 450 - 479 6.3e-06 PPR repeat
PPR_2 PF13041 595 - 639 9.4e-10 PPR repeat family
PPR PF01535 599 - 628 9.9e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1011
AccB1I GGYRCC 2 cut(s) 200, 520
AccB7I CCANNNNNTGG 1 cut(s) 1544
AccI GTMKAC 1 cut(s) 280
AccIII TCCGGA 1 cut(s) 1428
AciI CCGC 6 cut(s) 177, 675, 692, 1140, 1926, 2121
AclI AACGTT 2 cut(s) 126, 1464
AclWI GGATC 2 cut(s) 486, 1300
AcoI YGGCCR 2 cut(s) 1224, 1372
AcsI RAATTY 5 cut(s) 92, 98, 285, 1039, 1093
AcuI CTGAAG 1 cut(s) 1145
AfaI GTAC 5 cut(s) 426, 1178, 1525, 1727, 2005
AfiI CCNNNNNNNGG 5 cut(s) 471, 675, 1544, 1651, 2161
AflIII ACRYGT 1 cut(s) 1722
AjnI CCWGG 1 cut(s) 208
AjuI GAANNNNNNNTTGG 2 cut(s) 83, 115
AloI GAACNNNNNNTCC 2 cut(s) 467, 499
Alw21I GWGCWC 3 cut(s) 217, 1569, 1612
Alw26I GTCTC 2 cut(s) 1223, 1753
AlwI GGATC 2 cut(s) 486, 1300
AlwNI CAGNNNCTG 1 cut(s) 397
Aor13HI TCCGGA 1 cut(s) 1428
AoxI GGCC 5 cut(s) 929, 1034, 1224, 1372, 1816
ApeKI GCWGC 4 cut(s) 437, 1265, 1616, 1834
ApoI RAATTY 5 cut(s) 92, 98, 285, 1039, 1093
Asp700I GAANNNNTTC 2 cut(s) 958, 1517
AspLEI GCGC 1 cut(s) 565
AspS9I GGNCC 2 cut(s) 1034, 1426
AsuHPI GGTGA 5 cut(s) 37, 823, 832, 1327, 1940
AsuII TTCGAA 1 cut(s) 318
AvaII GGWCC 1 cut(s) 1426
AxyI CCTNAGG 1 cut(s) 1310
BalI TGGCCA 1 cut(s) 1374
BanI GGYRCC 2 cut(s) 200, 520
BanII GRGCYC 1 cut(s) 217
Bbv12I GWGCWC 3 cut(s) 217, 1569, 1612
BbvCI CCTCAGC 1 cut(s) 1673
BbvI GCAGC 4 cut(s) 449, 1277, 1628, 1846
BccI CCATC 8 cut(s) 80, 616, 781, 1025, 1417, 1426, 1538, 1546
BciT130I CCWGG 1 cut(s) 210
BciVI GTATCC 1 cut(s) 1658
BclI TGATCA 1 cut(s) 1990
BcoDI GTCTC 2 cut(s) 1223, 1753
BfuI GTATCC 1 cut(s) 1658
BisI GCNGC 4 cut(s) 438, 1266, 1617, 1835
BlsI GCNGC 4 cut(s) 439, 1267, 1618, 1836
Bme1390I CCNGG 1 cut(s) 210
Bme18I GGWCC 1 cut(s) 1426
BmgT120I GGNCC 2 cut(s) 1034, 1426
BmiI GGNNCC 2 cut(s) 202, 522
BmrFI CCNGG 1 cut(s) 210
BmsI GCATC 5 cut(s) 982, 991, 1138, 1308, 2083
Bpu10I CCTNAGC 1 cut(s) 1673
Bpu14I TTCGAA 1 cut(s) 318
BpuEI CTTGAG 1 cut(s) 1690
BsaBI GATNNNNATC 1 cut(s) 1632
BsaI GGTCTC 1 cut(s) 1223
BsaJI CCNNGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
BsaWI WCCGGW 1 cut(s) 1428
BsaXI ACNNNNNCTCC 4 cut(s) 467, 497, 678, 708
Bsc4I CCNNNNNNNGG 5 cut(s) 471, 675, 1544, 1651, 2161
Bse1I ACTGG 1 cut(s) 204
Bse21I CCTNAGG 1 cut(s) 1310
Bse3DI GCAATG 3 cut(s) 476, 717, 915
Bse8I GATNNNNATC 1 cut(s) 1632
BseAI TCCGGA 1 cut(s) 1428
BseBI CCWGG 1 cut(s) 210
BseDI CCNNGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
BseGI GGATG 5 cut(s) 637, 997, 1006, 1197, 1437
BseJI GATNNNNATC 1 cut(s) 1632
BseLI CCNNNNNNNGG 5 cut(s) 471, 675, 1544, 1651, 2161
BseMI GCAATG 3 cut(s) 476, 717, 915
BseMII CTCAG 7 cut(s) 204, 219, 1563, 1664, 1764, 1934, 2187
BseNI ACTGG 1 cut(s) 204
BseRI GAGGAG 2 cut(s) 1690, 1907
BseXI GCAGC 4 cut(s) 449, 1277, 1628, 1846
BseYI CCCAGC 1 cut(s) 221
BsgI GTGCAG 2 cut(s) 1095, 1284
BshFI GGCC 5 cut(s) 931, 1036, 1226, 1374, 1818
BshNI GGYRCC 2 cut(s) 200, 520
BsiHKAI GWGCWC 3 cut(s) 217, 1569, 1612
BsiSI CCGG 1 cut(s) 1429
BslI CCNNNNNNNGG 5 cut(s) 471, 675, 1544, 1651, 2161
BsmAI GTCTC 2 cut(s) 1223, 1753
BsmI GAATGC 5 cut(s) 850, 1282, 1807, 2113, 2145
BsnI GGCC 5 cut(s) 931, 1036, 1226, 1374, 1818
Bso31I GGTCTC 1 cut(s) 1223
Bsp119I TTCGAA 1 cut(s) 318
Bsp1286I GDGCHC 3 cut(s) 217, 1569, 1612
Bsp13I TCCGGA 1 cut(s) 1428
Bsp143I GATC 5 cut(s) 478, 1305, 1627, 1809, 1990
Bsp19I CCATGG 2 cut(s) 1221, 1660
BspACI CCGC 6 cut(s) 177, 675, 692, 1140, 1926, 2121
BspANI GGCC 5 cut(s) 931, 1036, 1226, 1374, 1818
BspCNI CTCAG 7 cut(s) 203, 220, 1564, 1665, 1763, 1935, 2188
BspEI TCCGGA 1 cut(s) 1428
BspHI TCATGA 1 cut(s) 1905
BspLI GGNNCC 2 cut(s) 202, 522
BspPI GGATC 2 cut(s) 486, 1300
BspQI GCTCTTC 1 cut(s) 897
BspT104I TTCGAA 1 cut(s) 318
BspT107I GGYRCC 2 cut(s) 200, 520
BspTNI GGTCTC 1 cut(s) 1223
BsrDI GCAATG 3 cut(s) 476, 717, 915
BsrI ACTGG 1 cut(s) 204
BssECI CCNNGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
BssMI GATC 5 cut(s) 478, 1305, 1627, 1809, 1990
BssT1I CCWWGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
Bst2UI CCWGG 1 cut(s) 210
Bst4CI ACNGT 1 cut(s) 424
Bst6I CTCTTC 3 cut(s) 818, 897, 1948
BstAPI GCANNNNNTGC 1 cut(s) 1622
BstBI TTCGAA 1 cut(s) 318
BstC8I GCNNGC 6 cut(s) 348, 1057, 1078, 1372, 1816, 2010
BstDSI CCRYGG 2 cut(s) 1221, 1660
BstEII GGTNACC 1 cut(s) 260
BstF5I GGATG 5 cut(s) 637, 997, 1006, 1197, 1437
BstHHI GCGC 1 cut(s) 565
BstKTI GATC 5 cut(s) 481, 1308, 1630, 1812, 1993
BstMAI GTCTC 2 cut(s) 1223, 1753
BstMBI GATC 5 cut(s) 478, 1305, 1627, 1809, 1990
BstMWI GCNNNNNNNGC 9 cut(s) 167, 176, 185, 352, 1001, 1376, 1616, 1622, 1811
BstNI CCWGG 1 cut(s) 210
BstNSI RCATGY 4 cut(s) 1672, 1726, 1834, 2032
BstPI GGTNACC 1 cut(s) 260
BstSCI CCNGG 1 cut(s) 208
BstV1I GCAGC 4 cut(s) 449, 1277, 1628, 1846
BstX2I RGATCY 2 cut(s) 478, 1305
BstYI RGATCY 2 cut(s) 478, 1305
Bsu36I CCTNAGG 1 cut(s) 1310
BsuI GTATCC 1 cut(s) 1658
BsuRI GGCC 5 cut(s) 931, 1036, 1226, 1374, 1818
BtgI CCRYGG 2 cut(s) 1221, 1660
BtgZI GCGATG 1 cut(s) 800
BtsCI GGATG 5 cut(s) 637, 997, 1006, 1197, 1437
BtsI GCAGTG 1 cut(s) 238
BtsIMutI CAGTG 2 cut(s) 238, 2073
Cac8I GCNNGC 6 cut(s) 348, 1057, 1078, 1372, 1816, 2010
CaiI CAGNNNCTG 1 cut(s) 397
CciI TCATGA 1 cut(s) 1905
CfoI GCGC 1 cut(s) 565
Cfr13I GGNCC 2 cut(s) 1034, 1426
CseI GACGC 1 cut(s) 1310
Csp6I GTAC 5 cut(s) 425, 1177, 1524, 1726, 2004
CviQI GTAC 5 cut(s) 425, 1177, 1524, 1726, 2004
DpnI GATC 5 cut(s) 480, 1307, 1629, 1811, 1992
DpnII GATC 5 cut(s) 478, 1305, 1627, 1809, 1990
EaeI YGGCCR 2 cut(s) 1224, 1372
Eam1104I CTCTTC 3 cut(s) 818, 897, 1948
EarI CTCTTC 3 cut(s) 818, 897, 1948
Ecl136II GAGCTC 1 cut(s) 215
Eco130I CCWWGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
Eco24I GRGCYC 1 cut(s) 217
Eco31I GGTCTC 1 cut(s) 1223
Eco32I GATATC 1 cut(s) 837
Eco47I GGWCC 1 cut(s) 1426
Eco53kI GAGCTC 1 cut(s) 215
Eco57I CTGAAG 1 cut(s) 1145
Eco81I CCTNAGG 1 cut(s) 1310
Eco91I GGTNACC 1 cut(s) 260
EcoICRI GAGCTC 1 cut(s) 215
EcoO65I GGTNACC 1 cut(s) 260
EcoRII CCWGG 1 cut(s) 208
EcoRV GATATC 1 cut(s) 837
EcoT14I CCWWGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
EcoT38I GRGCYC 1 cut(s) 217
ErhI CCWWGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
FalI AAGNNNNNCTT 2 cut(s) 1866, 1898
FauI CCCGC 1 cut(s) 668
FauNDI CATATG 1 cut(s) 1405
FbaI TGATCA 1 cut(s) 1990
FblI GTMKAC 1 cut(s) 280
Fnu4HI GCNGC 4 cut(s) 438, 1266, 1617, 1835
FokI GGATG 5 cut(s) 644, 1004, 1013, 1204, 1444
FriOI GRGCYC 1 cut(s) 217
Fsp4HI GCNGC 4 cut(s) 438, 1266, 1617, 1835
GlaI GCGC 1 cut(s) 564
GluI GCNGC 4 cut(s) 438, 1266, 1617, 1835
GsaI CCCAGC 1 cut(s) 225
HaeIII GGCC 5 cut(s) 931, 1036, 1226, 1374, 1818
HapII CCGG 1 cut(s) 1429
HgaI GACGC 1 cut(s) 1310
HhaI GCGC 1 cut(s) 565
Hin6I GCGC 1 cut(s) 563
HinP1I GCGC 1 cut(s) 563
HincII GTYRAC 2 cut(s) 1720, 1825
HindII GTYRAC 2 cut(s) 1720, 1825
HindIII AAGCTT 2 cut(s) 344, 1506
HinfI GANTC 7 cut(s) 595, 626, 800, 954, 1087, 1574, 1981
HpaII CCGG 1 cut(s) 1429
HphI GGTGA 5 cut(s) 37, 823, 832, 1327, 1940
Hpy166II GTNNAC 4 cut(s) 281, 738, 1720, 1825
Hpy188III TCNNGA 5 cut(s) 1429, 1739, 1850, 1883, 1906
Hpy8I GTNNAC 4 cut(s) 281, 738, 1720, 1825
HpyAV CCTTC 9 cut(s) 49, 69, 610, 802, 914, 1151, 1288, 1645, 1871
HpyCH4III ACNGT 1 cut(s) 424
HpyCH4IV ACGT 2 cut(s) 126, 1464
HpyF10VI GCNNNNNNNGC 9 cut(s) 167, 176, 185, 352, 1001, 1376, 1616, 1622, 1811
HpySE526I ACGT 2 cut(s) 126, 1464
HspAI GCGC 1 cut(s) 563
Kpn2I TCCGGA 1 cut(s) 1428
Ksp22I TGATCA 1 cut(s) 1990
Kzo9I GATC 5 cut(s) 478, 1305, 1627, 1809, 1990
LguI GCTCTTC 1 cut(s) 897
LmnI GCTCC 4 cut(s) 4, 212, 467, 1572
Lsp1109I GCAGC 4 cut(s) 449, 1277, 1628, 1846
LweI GCATC 5 cut(s) 982, 991, 1138, 1308, 2083
MaeII ACGT 2 cut(s) 126, 1464
MaeIII GTNAC 3 cut(s) 236, 260, 1045
MalI GATC 5 cut(s) 480, 1307, 1629, 1811, 1992
MboI GATC 5 cut(s) 478, 1305, 1627, 1809, 1990
MboII GAAGA 7 cut(s) 34, 835, 884, 929, 1096, 1886, 1965
MfeI CAATTG 1 cut(s) 1050
MflI RGATCY 2 cut(s) 478, 1305
MhlI GDGCHC 3 cut(s) 217, 1569, 1612
MlsI TGGCCA 1 cut(s) 1374
MluNI TGGCCA 1 cut(s) 1374
MlyI GAGTC 2 cut(s) 1583, 1990
MmeI TCCRAC 3 cut(s) 1606, 1778, 2146
Mox20I TGGCCA 1 cut(s) 1374
MroI TCCGGA 1 cut(s) 1428
MroXI GAANNNNTTC 2 cut(s) 958, 1517
MscI TGGCCA 1 cut(s) 1374
MseI TTAA 8 cut(s) 149, 308, 500, 939, 1334, 1416, 1469, 2085
MslI CAYNNNNRTG 2 cut(s) 809, 1244
Msp20I TGGCCA 1 cut(s) 1374
MspA1I CMGCKG 1 cut(s) 1837
MspI CCGG 1 cut(s) 1429
MspR9I CCNGG 1 cut(s) 210
MunI CAATTG 1 cut(s) 1050
Mva1269I GAATGC 5 cut(s) 850, 1282, 1807, 2113, 2145
MvaI CCWGG 1 cut(s) 210
MwoI GCNNNNNNNGC 9 cut(s) 167, 176, 185, 352, 1001, 1376, 1616, 1622, 1811
NcoI CCATGG 2 cut(s) 1221, 1660
NdeI CATATG 1 cut(s) 1405
NdeII GATC 5 cut(s) 478, 1305, 1627, 1809, 1990
NlaIV GGNNCC 2 cut(s) 202, 522
NmeAIII GCCGAG 2 cut(s) 957, 1252
NmuCI GTSAC 1 cut(s) 236
NspI RCATGY 4 cut(s) 1672, 1726, 1834, 2032
NspV TTCGAA 1 cut(s) 318
PagI TCATGA 1 cut(s) 1905
PciI ACATGT 1 cut(s) 1722
PciSI GCTCTTC 1 cut(s) 897
PctI GAATGC 5 cut(s) 850, 1282, 1807, 2113, 2145
PdmI GAANNNNTTC 2 cut(s) 958, 1517
PfeI GAWTC 5 cut(s) 595, 626, 800, 954, 1087
PflMI CCANNNNNTGG 1 cut(s) 1544
PfoI TCCNGGA 1 cut(s) 208
PkrI GCNGC 4 cut(s) 439, 1267, 1618, 1836
PleI GAGTC 2 cut(s) 1582, 1989
PpsI GAGTC 2 cut(s) 1582, 1989
PscI ACATGT 1 cut(s) 1722
PsiI TTATAA 1 cut(s) 1011
Psp124BI GAGCTC 1 cut(s) 217
Psp1406I AACGTT 2 cut(s) 126, 1464
Psp6I CCWGG 1 cut(s) 208
PspEI GGTNACC 1 cut(s) 260
PspFI CCCAGC 1 cut(s) 221
PspGI CCWGG 1 cut(s) 208
PspN4I GGNNCC 2 cut(s) 202, 522
PspPI GGNCC 2 cut(s) 1034, 1426
PstNI CAGNNNCTG 1 cut(s) 397
PsuI RGATCY 2 cut(s) 478, 1305
PvuII CAGCTG 1 cut(s) 1837
RsaI GTAC 5 cut(s) 426, 1178, 1525, 1727, 2005
RsaNI GTAC 5 cut(s) 425, 1177, 1524, 1726, 2004
RseI CAYNNNNRTG 2 cut(s) 809, 1244
SacI GAGCTC 1 cut(s) 217
SapI GCTCTTC 1 cut(s) 897
SaqAI TTAA 8 cut(s) 149, 308, 500, 939, 1334, 1416, 1469, 2085
SatI GCNGC 4 cut(s) 438, 1266, 1617, 1835
Sau3AI GATC 5 cut(s) 478, 1305, 1627, 1809, 1990
Sau96I GGNCC 2 cut(s) 1034, 1426
SchI GAGTC 2 cut(s) 1583, 1990
ScrFI CCNGG 1 cut(s) 210
SduI GDGCHC 3 cut(s) 217, 1569, 1612
SfaNI GCATC 5 cut(s) 982, 991, 1138, 1308, 2083
SfuI TTCGAA 1 cut(s) 318
SinI GGWCC 1 cut(s) 1426
SmiMI CAYNNNNRTG 2 cut(s) 809, 1244
SmlI CTYRAG 1 cut(s) 1705
SmoI CTYRAG 1 cut(s) 1705
SsiI CCGC 6 cut(s) 177, 675, 692, 1140, 1926, 2121
SspI AATATT 3 cut(s) 983, 1365, 1450
SstI GAGCTC 1 cut(s) 217
StyD4I CCNGG 1 cut(s) 208
StyI CCWWGG 5 cut(s) 1221, 1645, 1660, 2019, 2160
TaaI ACNGT 1 cut(s) 424
TaiI ACGT 2 cut(s) 129, 1467
TaqI TCGA 2 cut(s) 318, 1730
TatI WGTACW 2 cut(s) 1176, 1725
TfiI GAWTC 5 cut(s) 595, 626, 800, 954, 1087
Tru1I TTAA 8 cut(s) 149, 308, 500, 939, 1334, 1416, 1469, 2085
Tru9I TTAA 8 cut(s) 149, 308, 500, 939, 1334, 1416, 1469, 2085
TscAI CASTG 2 cut(s) 245, 2073
TseFI GTSAC 1 cut(s) 236
TseI GCWGC 4 cut(s) 437, 1265, 1616, 1834
Tsp45I GTSAC 1 cut(s) 236
TspDTI ATGAA 8 cut(s) 278, 420, 587, 776, 821, 993, 1100, 1208
TspRI CASTG 2 cut(s) 245, 2073
Van91I CCANNNNNTGG 1 cut(s) 1544
VpaK11BI GGWCC 1 cut(s) 1426
XapI RAATTY 5 cut(s) 92, 98, 285, 1039, 1093
XceI RCATGY 4 cut(s) 1672, 1726, 1834, 2032
XcmI CCANNNNNNNNNTGG 1 cut(s) 1382
XmiI GTMKAC 1 cut(s) 280
XmnI GAANNNNTTC 2 cut(s) 958, 1517
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.