Rh7CG507200

Pentatricopeptide repeat-containing protein At1g19720-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0012631
Physical Location & Seq
Forward (+)
68605644 .. 68609223
3580 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG507200.1

Sequence Viewer

Length: 2199 bp
ATGGAGCTTCTTCGTTCTGCTTTGCTTCCCACCACTCTCTTCTTCACCGACCCCTCTCCCTCACAAACACCCATCAATCCTCACACACCCAAATTCAAATTCCGAGCTTCCACAGACACCACCAACGTTCCCACCACCCCCACACTCTTAAACCCACAACCCCATCTCGCTTTTACCGCCAAAAAAGCCACAGACTTTAGTCCAGGAGCTCAACCCAGCTCTGAGGTTAGTCACTGCATTTCTTTACTTAGAGGTAACCATGTAGCTGATTGTAGACAAATTCATGCTCTTGCTTTGAAGTTGAATGCTTTTGAAGTGAATAGTTGGGTAGGAAACAAGCTTGCTGTGCTTTACTCCAAGAACTATGAGCTTTTAGACTATGCCCAGAAGCTGTTTTATGAAATGCCTAAGAGAACAGTACCCACTTATGCAGCTTTGATTAGTGCTTATTGTCGTGCCGAGCAATGGGAGGATCTGTTCTTGGTGTTTAGGTTAATGGTTGATGAGGGAATGATGCCTGATGTGTATGTTGTGCCTACGCTATTGAAAGCGTGTGCGTTGACGAAAATGGTGGGGATTGGGAGAATGATTCATGGGTTTGTGATAAGGAAGGAAATGGATTCGGATGTTTTTGTGGGTAATTCGCTTATAGATTTTTATGGTAACTGTGGGGATTTGGGAGTTGCGGTGAGTGTGTTTGGCGCAATGAGGGAAAGAGATGTGGTTTCGTGGACTGCCCTTGTTTCGGCTTTTATGAATGAGGGTCTTTTTGAGGAAGCAATGGAGGTTTTTGAGTCCATGAAGGTGAATGGGGTGAAGAGGGATTTGATATCATGGAATGCGCTTGTTTCGGGGTTTGCACAGAATGGGGAGATTGATTTGGCTCTTCAGTATTTGGAGGCGATGCAAGAGGAAGGGTTGAGGCCGAGAGTTAATTCTTGGAATGGAGTCATTTCGGGATGTATTCAGAATGAATATTTTGAGGATGCTTTGGATGCGTTTTATAAAATGTTGTGTTTTCCCGAGGAGCCGAATTTTGTTACAATTGCAAGCATTTTACCAGCTTGTGCAGGCTTGAAAGATCTGAACTTAGGCAGGGCAATTCATGGATTTTCTCTGAAGCGTCAGCTTTGCAGTAATACTCATGTGGAAGGTTCATTGATTGGTATGTACTCAAAATGTGGGATGAAAGATTATGCAGAGAAAGTTTTTTCCATGGCTGAGACCAAAAGCATTGGAATGTGGAATGAGATGATTGCAGCTTATGTGAATTCAGGAGAAACAGAGAAGGGAATAGAGCTTCTAAGGGTGATGCATCATCATGGCTTAAAACCTGATGTGGTGTCCTATAACACAATATTGGCTGGCCATGCAAGAAATGGGCAAAAGAATGAGGCATATGAGTTGCTTAATGAGATGGTCCGGATGGATTTGAAACCAAATATTATCTCTTTCAACGTTTTAATTTCTGGTTTTCAACAATTTGGGCTTAGTTTTGAAGCTTTGAAATTGTTCTGTACCATGCAATTCCCATCTGATCGTTCCTTTGCTGATTTTGTGCTCGCTGAGTCAATCCAACCAAATTCCATTACTATTGCTGGTGCTCTTGCAGCTTGTGCTGATCTCAATCTACTATCCCAAGGGAAGGAAATCCATGGATACACGCTGAGGAGTGGCTTTGAGCCTAATGTCTATATCTCAAGTGCATTGGTTGACATGTACTCGAAATGTCTGGATATTGTCTCAGCAACGAATGTATTTAGGAGAATTGAGGACAGAAACACAATCTGTTGGAATGCTATGATCGCAGGCCATGTCAACAACATGCAGCTGAACTTAGCTCTTGAACATTTCTGCGAAATGCTGGAAGAAGGTCTTGAACCAAGCTCTATCACACTCATGATACTTCTCCTCACTTGTGGTGATATGACAGCTCTGAGATTTGGAAGAGAATTACATGGATATATCATAAAGAGTCAGCTTGATCAGTCTGATAGTACGCTTGCAAGTGCCTTGGTAGGCATGTATGCCAAGTGTGGTAGTATCAAGGAAGCTAAATCAGTGTTTGACTTAGAAGTTAAAAAAGATGCCTTGCTGTGGAATGCCATGTTATCTGCTTATTCAACTAATGGAATGCTCAATAATGCCCTTGCCTTGGTTGGACAAATGGAGTTGGTGGGCGTTGTGCCTGAGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

732

Amino Acids

81.18

Weight (kDa)

5.34

Isoelectric Point (pI)

34.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 139 - 186 2.5e-07 PPR repeat family
TPR_24 PF23276 228 - 335 3e-07 Fungal tetratrico peptide repeats
PPR_2 PF13041 239 - 275 1e-07 PPR repeat family
PPR PF01535 242 - 272 2.7e-07 PPR repeat
TPR_24 PF23276 255 - 338 2.8e-06 Fungal tetratrico peptide repeats
PPR_3 PF13812 267 - 321 2.9e-07 Pentatricopeptide repeat domain
PPR PF01535 277 - 307 5.4e-06 PPR repeat
PPR_2 PF13041 412 - 451 6.9e-07 PPR repeat family
TPR_24 PF23276 415 - 505 5.8e-06 Fungal tetratrico peptide repeats
PPR_3 PF13812 434 - 490 1.4e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 442 - 474 1.2e-09 PPR repeat
PPR_2 PF13041 445 - 492 1.6e-15 PPR repeat family
PPR PF01535 448 - 477 6.2e-06 PPR repeat
PPR_2 PF13041 594 - 638 7.3e-09 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1005
AccI GTMKAC 1 cut(s) 274
AccIII TCCGGA 1 cut(s) 1422
AciI CCGC 2 cut(s) 177, 686
AclI AACGTT 2 cut(s) 126, 1458
AclWI GGATC 1 cut(s) 480
AcoI YGGCCR 1 cut(s) 1366
AcsI RAATTY 6 cut(s) 92, 98, 279, 1033, 1270, 1582
AcuI CTGAAG 2 cut(s) 872, 1139
AfaI GTAC 5 cut(s) 420, 1172, 1519, 1721, 1999
AfiI CCNNNNNNNGG 5 cut(s) 465, 745, 1645, 2097, 2155
AflIII ACRYGT 1 cut(s) 1716
AjnI CCWGG 1 cut(s) 202
AjuI GAANNNNNNNTTGG 2 cut(s) 83, 115
AloI GAACNNNNNNTCC 2 cut(s) 461, 493
Alw21I GWGCWC 3 cut(s) 211, 1563, 1606
Alw26I GTCTC 2 cut(s) 1217, 1747
AlwI GGATC 1 cut(s) 480
AlwNI CAGNNNCTG 1 cut(s) 391
Ama87I CYCGRG 1 cut(s) 1022
Aor13HI TCCGGA 1 cut(s) 1422
AoxI GGCC 3 cut(s) 923, 1366, 1810
ApeKI GCWGC 4 cut(s) 431, 1259, 1610, 1828
ApoI RAATTY 6 cut(s) 92, 98, 279, 1033, 1270, 1582
Asp700I GAANNNNTTC 1 cut(s) 1511
AspLEI GCGC 2 cut(s) 704, 844
AspS9I GGNCC 1 cut(s) 1420
AsuHPI GGTGA 6 cut(s) 37, 700, 817, 826, 1321, 1934
AvaI CYCGRG 1 cut(s) 1022
AvaII GGWCC 1 cut(s) 1420
BalI TGGCCA 1 cut(s) 1368
BanII GRGCYC 1 cut(s) 211
Bbv12I GWGCWC 3 cut(s) 211, 1563, 1606
BbvCI CCTCAGC 1 cut(s) 1667
BbvI GCAGC 4 cut(s) 443, 1271, 1622, 1840
BccI CCATC 5 cut(s) 80, 171, 1411, 1420, 1540
BciT130I CCWGG 1 cut(s) 204
BciVI GTATCC 1 cut(s) 1652
BclI TGATCA 1 cut(s) 1984
BcoDI GTCTC 2 cut(s) 1217, 1747
BfuI GTATCC 1 cut(s) 1652
BglII AGATCT 1 cut(s) 1081
BisI GCNGC 4 cut(s) 432, 1260, 1611, 1829
BlsI GCNGC 4 cut(s) 433, 1261, 1612, 1830
Bme1390I CCNGG 1 cut(s) 204
Bme18I GGWCC 1 cut(s) 1420
BmeT110I CYCGRG 1 cut(s) 1022
BmgT120I GGNCC 1 cut(s) 1420
BmiI GGNNCC 1 cut(s) 1029
BmrFI CCNGG 1 cut(s) 204
BmsI GCATC 7 cut(s) 504, 894, 976, 985, 1302, 1324, 2077
BoxI GACNNNNGTC 1 cut(s) 198
Bpu10I CCTNAGC 1 cut(s) 1667
BpuEI CTTGAG 1 cut(s) 1684
BsaBI GATNNNNATC 1 cut(s) 1626
BsaI GGTCTC 1 cut(s) 1217
BsaJI CCNNGG 6 cut(s) 1023, 1215, 1639, 1654, 2013, 2154
BsaWI WCCGGW 1 cut(s) 1422
BsaXI ACNNNNNCTCC 4 cut(s) 461, 491, 672, 702
Bsc4I CCNNNNNNNGG 5 cut(s) 465, 745, 1645, 2097, 2155
Bse3DI GCAATG 3 cut(s) 470, 711, 786
Bse8I GATNNNNATC 1 cut(s) 1626
BseAI TCCGGA 1 cut(s) 1422
BseBI CCWGG 1 cut(s) 204
BseDI CCNNGG 6 cut(s) 1023, 1215, 1639, 1654, 2013, 2154
BseGI GGATG 6 cut(s) 631, 965, 991, 1000, 1191, 1431
BseJI GATNNNNATC 1 cut(s) 1626
BseLI CCNNNNNNNGG 5 cut(s) 465, 745, 1645, 2097, 2155
BseMI GCAATG 3 cut(s) 470, 711, 786
BseMII CTCAG 7 cut(s) 213, 1212, 1557, 1658, 1758, 1928, 2181
BseRI GAGGAG 3 cut(s) 1040, 1684, 1901
BseXI GCAGC 4 cut(s) 443, 1271, 1622, 1840
BseYI CCCAGC 1 cut(s) 215
BsgI GTGCAG 1 cut(s) 1089
BshFI GGCC 3 cut(s) 925, 1368, 1812
BsiHKAI GWGCWC 3 cut(s) 211, 1563, 1606
BsiHKCI CYCGRG 1 cut(s) 1022
BsiSI CCGG 1 cut(s) 1423
BslI CCNNNNNNNGG 5 cut(s) 465, 745, 1645, 2097, 2155
BsmAI GTCTC 2 cut(s) 1217, 1747
BsmI GAATGC 5 cut(s) 310, 844, 1801, 2107, 2139
BsnI GGCC 3 cut(s) 925, 1368, 1812
Bso31I GGTCTC 1 cut(s) 1217
BsoBI CYCGRG 1 cut(s) 1022
Bsp1286I GDGCHC 3 cut(s) 211, 1563, 1606
Bsp13I TCCGGA 1 cut(s) 1422
Bsp143I GATC 6 cut(s) 472, 1081, 1537, 1621, 1803, 1984
Bsp19I CCATGG 2 cut(s) 1215, 1654
BspACI CCGC 2 cut(s) 177, 686
BspANI GGCC 3 cut(s) 925, 1368, 1812
BspCNI CTCAG 7 cut(s) 214, 1213, 1558, 1659, 1757, 1929, 2182
BspEI TCCGGA 1 cut(s) 1422
BspHI TCATGA 1 cut(s) 1899
BspLI GGNNCC 1 cut(s) 1029
BspPI GGATC 1 cut(s) 480
BspQI GCTCTTC 1 cut(s) 891
BspTNI GGTCTC 1 cut(s) 1217
BsrDI GCAATG 3 cut(s) 470, 711, 786
BssECI CCNNGG 6 cut(s) 1023, 1215, 1639, 1654, 2013, 2154
BssMI GATC 6 cut(s) 472, 1081, 1537, 1621, 1803, 1984
BssT1I CCWWGG 5 cut(s) 1215, 1639, 1654, 2013, 2154
Bst2UI CCWGG 1 cut(s) 204
Bst4CI ACNGT 2 cut(s) 418, 668
Bst6I CTCTTC 4 cut(s) 44, 812, 891, 1942
BstAPI GCANNNNNTGC 1 cut(s) 1616
BstC8I GCNNGC 7 cut(s) 342, 1051, 1072, 1366, 1563, 1810, 2004
BstDSI CCRYGG 2 cut(s) 1215, 1654
BstEII GGTNACC 1 cut(s) 254
BstF5I GGATG 6 cut(s) 631, 965, 991, 1000, 1191, 1431
BstHHI GCGC 2 cut(s) 704, 844
BstKTI GATC 6 cut(s) 475, 1084, 1540, 1624, 1806, 1987
BstMAI GTCTC 2 cut(s) 1217, 1747
BstMBI GATC 6 cut(s) 472, 1081, 1537, 1621, 1803, 1984
BstMWI GCNNNNNNNGC 8 cut(s) 176, 185, 346, 995, 1370, 1610, 1616, 1805
BstNI CCWGG 1 cut(s) 204
BstNSI RCATGY 3 cut(s) 1720, 1828, 2026
BstPAI GACNNNNGTC 1 cut(s) 198
BstPI GGTNACC 1 cut(s) 254
BstSCI CCNGG 1 cut(s) 202
BstV1I GCAGC 4 cut(s) 443, 1271, 1622, 1840
BstX2I RGATCY 2 cut(s) 472, 1081
BstYI RGATCY 2 cut(s) 472, 1081
BsuI GTATCC 1 cut(s) 1652
BsuRI GGCC 3 cut(s) 925, 1368, 1812
BtgI CCRYGG 2 cut(s) 1215, 1654
BtgZI GCGATG 1 cut(s) 917
BtsCI GGATG 6 cut(s) 631, 965, 991, 1000, 1191, 1431
BtsI GCAGTG 1 cut(s) 232
BtsIMutI CAGTG 2 cut(s) 232, 2067
Cac8I GCNNGC 7 cut(s) 342, 1051, 1072, 1366, 1563, 1810, 2004
CaiI CAGNNNCTG 1 cut(s) 391
CciI TCATGA 1 cut(s) 1899
CfoI GCGC 2 cut(s) 704, 844
Cfr13I GGNCC 1 cut(s) 1420
CseI GACGC 1 cut(s) 1112
Csp6I GTAC 5 cut(s) 419, 1171, 1518, 1720, 1998
CviQI GTAC 5 cut(s) 419, 1171, 1518, 1720, 1998
DpnI GATC 6 cut(s) 474, 1083, 1539, 1623, 1805, 1986
DpnII GATC 6 cut(s) 472, 1081, 1537, 1621, 1803, 1984
EaeI YGGCCR 1 cut(s) 1366
Eam1104I CTCTTC 4 cut(s) 44, 812, 891, 1942
EarI CTCTTC 4 cut(s) 44, 812, 891, 1942
Ecl136II GAGCTC 1 cut(s) 209
Eco130I CCWWGG 5 cut(s) 1215, 1639, 1654, 2013, 2154
Eco24I GRGCYC 1 cut(s) 211
Eco31I GGTCTC 1 cut(s) 1217
Eco32I GATATC 1 cut(s) 831
Eco47I GGWCC 1 cut(s) 1420
Eco53kI GAGCTC 1 cut(s) 209
Eco57I CTGAAG 2 cut(s) 872, 1139
Eco88I CYCGRG 1 cut(s) 1022
Eco91I GGTNACC 1 cut(s) 254
EcoICRI GAGCTC 1 cut(s) 209
EcoO65I GGTNACC 1 cut(s) 254
EcoRI GAATTC 1 cut(s) 1270
EcoRII CCWGG 1 cut(s) 202
EcoRV GATATC 1 cut(s) 831
EcoT14I CCWWGG 5 cut(s) 1215, 1639, 1654, 2013, 2154
EcoT22I ATGCAT 1 cut(s) 1317
EcoT38I GRGCYC 1 cut(s) 211
ErhI CCWWGG 5 cut(s) 1215, 1639, 1654, 2013, 2154
FalI AAGNNNNNCTT 2 cut(s) 1860, 1892
FauNDI CATATG 1 cut(s) 1399
FbaI TGATCA 1 cut(s) 1984
FblI GTMKAC 1 cut(s) 274
Fnu4HI GCNGC 4 cut(s) 432, 1260, 1611, 1829
FokI GGATG 6 cut(s) 638, 972, 998, 1007, 1198, 1438
FriOI GRGCYC 1 cut(s) 211
Fsp4HI GCNGC 4 cut(s) 432, 1260, 1611, 1829
GlaI GCGC 2 cut(s) 703, 843
GluI GCNGC 4 cut(s) 432, 1260, 1611, 1829
GsaI CCCAGC 1 cut(s) 219
HaeIII GGCC 3 cut(s) 925, 1368, 1812
HapII CCGG 1 cut(s) 1423
HgaI GACGC 1 cut(s) 1112
HhaI GCGC 2 cut(s) 704, 844
Hin6I GCGC 2 cut(s) 702, 842
HinP1I GCGC 2 cut(s) 702, 842
HincII GTYRAC 3 cut(s) 561, 1714, 1819
HindII GTYRAC 3 cut(s) 561, 1714, 1819
HindIII AAGCTT 2 cut(s) 338, 1500
HinfI GANTC 6 cut(s) 589, 620, 794, 948, 1568, 1975
HpaII CCGG 1 cut(s) 1423
HphI GGTGA 6 cut(s) 37, 700, 817, 826, 1321, 1934
Hpy166II GTNNAC 5 cut(s) 275, 561, 732, 1714, 1819
Hpy188I TCNGA 9 cut(s) 104, 223, 625, 969, 1086, 1119, 1537, 1938, 1993
Hpy188III TCNNGA 8 cut(s) 957, 1022, 1275, 1423, 1733, 1844, 1877, 1900
Hpy8I GTNNAC 5 cut(s) 275, 561, 732, 1714, 1819
HpyAV CCTTC 7 cut(s) 604, 796, 908, 1145, 1282, 1639, 1865
HpyCH4III ACNGT 2 cut(s) 418, 668
HpyCH4IV ACGT 2 cut(s) 126, 1458
HpyF10VI GCNNNNNNNGC 8 cut(s) 176, 185, 346, 995, 1370, 1610, 1616, 1805
HpySE526I ACGT 2 cut(s) 126, 1458
HspAI GCGC 2 cut(s) 702, 842
Kpn2I TCCGGA 1 cut(s) 1422
Ksp22I TGATCA 1 cut(s) 1984
Kzo9I GATC 6 cut(s) 472, 1081, 1537, 1621, 1803, 1984
LguI GCTCTTC 1 cut(s) 891
LmnI GCTCC 3 cut(s) 4, 206, 1027
Lsp1109I GCAGC 4 cut(s) 443, 1271, 1622, 1840
LweI GCATC 7 cut(s) 504, 894, 976, 985, 1302, 1324, 2077
MaeII ACGT 2 cut(s) 126, 1458
MaeIII GTNAC 4 cut(s) 230, 254, 662, 1039
MalI GATC 6 cut(s) 474, 1083, 1539, 1623, 1805, 1986
MboI GATC 6 cut(s) 472, 1081, 1537, 1621, 1803, 1984
MboII GAAGA 6 cut(s) 31, 34, 829, 878, 1880, 1959
MfeI CAATTG 1 cut(s) 1044
MflI RGATCY 2 cut(s) 472, 1081
MhlI GDGCHC 3 cut(s) 211, 1563, 1606
MlsI TGGCCA 1 cut(s) 1368
MluNI TGGCCA 1 cut(s) 1368
MlyI GAGTC 4 cut(s) 803, 957, 1577, 1984
MmeI TCCRAC 3 cut(s) 1600, 1772, 2140
Mox20I TGGCCA 1 cut(s) 1368
Mph1103I ATGCAT 1 cut(s) 1317
MroI TCCGGA 1 cut(s) 1422
MroXI GAANNNNTTC 1 cut(s) 1511
MscI TGGCCA 1 cut(s) 1368
MseI TTAA 7 cut(s) 149, 494, 933, 1328, 1410, 1463, 2079
MslI CAYNNNNRTG 4 cut(s) 803, 1238, 1320, 1898
Msp20I TGGCCA 1 cut(s) 1368
MspA1I CMGCKG 1 cut(s) 1831
MspI CCGG 1 cut(s) 1423
MspR9I CCNGG 1 cut(s) 204
MunI CAATTG 1 cut(s) 1044
Mva1269I GAATGC 5 cut(s) 310, 844, 1801, 2107, 2139
MvaI CCWGG 1 cut(s) 204
MwoI GCNNNNNNNGC 8 cut(s) 176, 185, 346, 995, 1370, 1610, 1616, 1805
NcoI CCATGG 2 cut(s) 1215, 1654
NdeI CATATG 1 cut(s) 1399
NdeII GATC 6 cut(s) 472, 1081, 1537, 1621, 1803, 1984
NlaIV GGNNCC 1 cut(s) 1029
NmeAIII GCCGAG 2 cut(s) 484, 951
NmuCI GTSAC 1 cut(s) 230
NsiI ATGCAT 1 cut(s) 1317
NspI RCATGY 3 cut(s) 1720, 1828, 2026
PagI TCATGA 1 cut(s) 1899
PciI ACATGT 1 cut(s) 1716
PciSI GCTCTTC 1 cut(s) 891
PctI GAATGC 5 cut(s) 310, 844, 1801, 2107, 2139
PdmI GAANNNNTTC 1 cut(s) 1511
PfeI GAWTC 2 cut(s) 589, 620
PfoI TCCNGGA 1 cut(s) 202
PkrI GCNGC 4 cut(s) 433, 1261, 1612, 1830
PleI GAGTC 4 cut(s) 802, 956, 1576, 1983
PpsI GAGTC 4 cut(s) 802, 956, 1576, 1983
PscI ACATGT 1 cut(s) 1716
PshAI GACNNNNGTC 1 cut(s) 198
PsiI TTATAA 1 cut(s) 1005
Psp124BI GAGCTC 1 cut(s) 211
Psp1406I AACGTT 2 cut(s) 126, 1458
Psp6I CCWGG 1 cut(s) 202
PspEI GGTNACC 1 cut(s) 254
PspFI CCCAGC 1 cut(s) 215
PspGI CCWGG 1 cut(s) 202
PspN4I GGNNCC 1 cut(s) 1029
PspPI GGNCC 1 cut(s) 1420
PstNI CAGNNNCTG 1 cut(s) 391
PsuI RGATCY 2 cut(s) 472, 1081
PvuII CAGCTG 1 cut(s) 1831
RsaI GTAC 5 cut(s) 420, 1172, 1519, 1721, 1999
RsaNI GTAC 5 cut(s) 419, 1171, 1518, 1720, 1998
RseI CAYNNNNRTG 4 cut(s) 803, 1238, 1320, 1898
SacI GAGCTC 1 cut(s) 211
SapI GCTCTTC 1 cut(s) 891
SaqAI TTAA 7 cut(s) 149, 494, 933, 1328, 1410, 1463, 2079
SatI GCNGC 4 cut(s) 432, 1260, 1611, 1829
Sau3AI GATC 6 cut(s) 472, 1081, 1537, 1621, 1803, 1984
Sau96I GGNCC 1 cut(s) 1420
SchI GAGTC 4 cut(s) 803, 957, 1577, 1984
ScrFI CCNGG 1 cut(s) 204
SduI GDGCHC 3 cut(s) 211, 1563, 1606
SfaNI GCATC 7 cut(s) 504, 894, 976, 985, 1302, 1324, 2077
SinI GGWCC 1 cut(s) 1420
SmiMI CAYNNNNRTG 4 cut(s) 803, 1238, 1320, 1898
SmlI CTYRAG 1 cut(s) 1699
SmoI CTYRAG 1 cut(s) 1699
SsiI CCGC 2 cut(s) 177, 686
SspI AATATT 3 cut(s) 977, 1359, 1444
SstI GAGCTC 1 cut(s) 211
StyD4I CCNGG 1 cut(s) 202
StyI CCWWGG 5 cut(s) 1215, 1639, 1654, 2013, 2154
TaaI ACNGT 2 cut(s) 418, 668
TaiI ACGT 2 cut(s) 129, 1461
TaqI TCGA 1 cut(s) 1724
TatI WGTACW 2 cut(s) 1170, 1719
TfiI GAWTC 2 cut(s) 589, 620
Tru1I TTAA 7 cut(s) 149, 494, 933, 1328, 1410, 1463, 2079
Tru9I TTAA 7 cut(s) 149, 494, 933, 1328, 1410, 1463, 2079
TscAI CASTG 2 cut(s) 239, 2067
TseFI GTSAC 1 cut(s) 230
TseI GCWGC 4 cut(s) 431, 1259, 1610, 1828
Tsp45I GTSAC 1 cut(s) 230
TspDTI ATGAA 9 cut(s) 272, 414, 581, 770, 815, 987, 1094, 1146, 1202
TspRI CASTG 2 cut(s) 239, 2067
VpaK11BI GGWCC 1 cut(s) 1420
XapI RAATTY 6 cut(s) 92, 98, 279, 1033, 1270, 1582
XceI RCATGY 3 cut(s) 1720, 1828, 2026
XcmI CCANNNNNNNNNTGG 1 cut(s) 1376
XmiI GTMKAC 1 cut(s) 274
XmnI GAANNNNTTC 1 cut(s) 1511
Zsp2I ATGCAT 1 cut(s) 1317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.