pycom08g14890

Pentatricopeptide repeat-containing protein At1g19720-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0012631
Physical Location & Seq
Reverse (-)
14298284 .. 14300488
2205 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g14890.1

Sequence Viewer

Length: 2205 bp
ATGGAAACTCTTTGGACTTGTTTGCTCCCCAGTAATCCCCTACTCGCCCAACCCTCCCTCTTACAAAAACCCAGCAATTCCCACAAACCCAAGTTCAAATTTCAAGCTTCCACGGCCACAACCGGCGTTTCCACCACCGCCACACTATCAAACCCAGCAAACCAACAAACCCATATCTCCTTTCCCGCCAAAATCAGCAACAATCCAATAGCTGCCCAACCCAGTTCTGAAATTGGTCGTTTCCTTTCATTACTGAAGAGCAACCCTTTGTCTGACTGTAGACAAATTCATGCCCAAGCTCTGAAGTTGGAAGCTTTTGAGGCTAATGGTTGGGTAAGAAACAAGCTTGCTATGCTTTACTCGAAGAGTGATGGGTTTTTAGACCATGCACGTAAGATGTTCAACGATATTCCCCAGAGAACTGTACCCACTTATGGGGCGTTGATAAGTGCATATTGTCGGTCAGAGCAGTGGGAAGATTTGTTTTTGGTGTTTGAGTTGATGATTGATGAGGGCATGATGCCGGATAAATACGTTGTGCCTACGGTTCTGAAAGCGTGTGCTCAGGTGCGGATGTTAAGGACTGGTAAAATGATTCATGGGCTTGTGATAAGGAATGCTTTTGATTCCGATGTTTTCGTGGGGAATGCGCTTATTGATTTTTATGCCAATTGTGGGGACTTTGGATTTGCAATGACTGTGTTTGATGCAATGAGGGAAACAGATGTAGTTTCATGGACTGCCCTTGTTTCTGCTTTCATGAATGAAGGTCTTTTTGAAGAGGCAATGGAGGTTTTCAAGTCCATGCAGGTGAATGGTGTCGAACCGGATTTGATCTCTTGGAATGCGCTTGTATCAGGGTTTGCACGGAATGGAGAGACTGATTTAGCTCTTCAGTATTTGGAAGTGATGCAGGAAGAAGGGTTGAAGCCTGGGGTTAGTACTTGGAACGGAATCATTTCCGGTTGTGTTCAGAATAGCTTTTTTGTGGATGCCTTGGATGCATTCAATAATATGTTATGTTTCCCTGAGGATCCAAACTCTGTTACAATTGCAAGCATATTACCATCTTGTGCAGGCCTGAAAGATTTAAACTTAGGCAGGGCTGTTCATGGATTTGCTCTGAAGCGTCAGCTGTGTGAGAACGTTTACGTGGAAGGTTCGTTAATTGATATGTATTCAAAATGTGGGATGAATGATTACGCAGAGAGGATTTTTTCCAAAGCCGAGAGCAAAAGCATTTCTATGTGGAATGAGATGGTTGCAGCCTATGTAAATGCAGGAGAAGCAAATAAGGGAATAGAACTTCTTAGAGTAATGCATAGTCATGGCATAAAACCTGATGTGGTATCTTATAACACAATATTGGCTGGCCACGCAAGAAATGGGCAAATAAATGAGGCATATGAGTTGCTTTATGAGATGGTCCGAATGGATTTGAAGCCAAATATTATTTCGTTCAACGTTTTAATTTCCGGATTTCAACAATTTGGGCTTAGTTTTGAAGCTTTGAAGGTGTTCCAGACCATGCAATCCCCATCTAGTGGTTACTTTGGTCATGATGTGCTCCATAAGTCAGTTCAACCAAACTCCATTACCATTGCCGGTGCTCTTGCAGCTTGTGCTGATCTTAATCTACTATGCCAGGGGAAGGAAATCCATGGATACACGTTGAAGACTAGCGTCGAGCCTAATATCTATATCTCAAGTGCATTGATCGACATGTATTCAAAATGTCATGATATTGCCTCAGCAGCAAAAGTATTTAGGAGAACTGATGATAAAAACACAATCTGTTGGAACGCTTTGATTGCAGGCCATGTCAACAAGAAGCAGCTGGACCGAGCTCTTGAACTTTTCGGTGAAATGCTGGAAGAAGGTCTTGGACCAAGCTCTGTTACGCTTATGACACTTCTTCTCACTTGTGGTGATTTGGAAGCTCTCAGGTTCGGAAGAGAATTACATGGACATATCATAAAGAGTCATCTCGATCAGTCTAATTTTAGCCTTGCGAGTGCCTTAGTAGGCATGTATGCTAAGTGCGGTAGTATCAAGGATGCTAAATCAGTCTTTGACTTTGAAGTTAAAGGGGATGTTTCTGTATGGAACTCCATGCTTTCTGCTAATTTAACTAACGGAACGGCCAAGAAGGCCATTGCCTTATTTCGGAAGATGCAGTTACTCGGGGTTGAGCCTGAGGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

735

Amino Acids

80.89

Weight (kDa)

5.77

Isoelectric Point (pI)

31.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 141 - 188 1.3e-06 PPR repeat family
TPR_24 PF23276 223 - 338 2.1e-08 Fungal tetratrico peptide repeats
PPR_3 PF13812 241 - 286 1.3e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 242 - 278 1.6e-08 PPR repeat family
PPR PF01535 244 - 274 4.2e-07 PPR repeat
PPR_1 PF12854 272 - 304 4.6e-06 PPR repeat
PPR_3 PF13812 273 - 326 1.6e-09 Pentatricopeptide repeat domain
PPR_2 PF13041 276 - 324 4e-09 PPR repeat family
PPR PF01535 279 - 309 7.7e-06 PPR repeat
TPR_24 PF23276 418 - 509 4.5e-07 Fungal tetratrico peptide repeats
PPR_3 PF13812 436 - 492 1e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 444 - 476 1.1e-09 PPR repeat
PPR_2 PF13041 447 - 494 7.3e-15 PPR repeat family
PPR PF01535 450 - 479 1.9e-06 PPR repeat
PPR_2 PF13041 595 - 639 1.1e-09 PPR repeat family
PPR PF01535 599 - 628 2.2e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1356
AarI CACCTGC 1 cut(s) 799
Acc36I ACCTGC 1 cut(s) 799
AccB7I CCANNNNNTGG 1 cut(s) 1544
AccI GTMKAC 1 cut(s) 280
AccIII TCCGGA 1 cut(s) 1475
AciI CCGC 4 cut(s) 138, 186, 571, 2043
AclI AACGTT 2 cut(s) 1146, 1464
AclWI GGATC 2 cut(s) 1028, 1041
AcoI YGGCCR 3 cut(s) 114, 1372, 2142
AcsI RAATTY 2 cut(s) 98, 285
AcuI CTGAAG 4 cut(s) 275, 323, 878, 1145
AfaI GTAC 2 cut(s) 426, 943
AfiI CCNNNNNNNGG 6 cut(s) 434, 435, 675, 1544, 1651, 2166
AflIII ACRYGT 2 cut(s) 1668, 1722
AjnI CCWGG 2 cut(s) 931, 1644
AjuI GAANNNNNNNTTGG 4 cut(s) 1438, 1470, 1866, 1898
Alw21I GWGCWC 4 cut(s) 565, 1569, 1612, 1849
Alw26I GTCTC 1 cut(s) 872
AlwI GGATC 2 cut(s) 1028, 1041
Ama87I CYCGRG 1 cut(s) 2183
Aor13HI TCCGGA 1 cut(s) 1475
AoxI GGCC 6 cut(s) 114, 1078, 1372, 1816, 2142, 2151
ApeKI GCWGC 5 cut(s) 212, 1265, 1616, 1754, 1834
ApoI RAATTY 2 cut(s) 98, 285
ArsI GACNNNNNNTTYG 2 cut(s) 671, 703
Asp700I GAANNNNTTC 2 cut(s) 958, 1517
AspLEI GCGC 2 cut(s) 652, 850
AspS9I GGNCC 3 cut(s) 1426, 1840, 1886
AsuHPI GGTGA 3 cut(s) 823, 1874, 1940
AvaI CYCGRG 1 cut(s) 2183
AvaII GGWCC 3 cut(s) 1426, 1840, 1886
AxyI CCTNAGG 2 cut(s) 1029, 2196
BalI TGGCCA 1 cut(s) 1374
BamHI GGATCC 1 cut(s) 1033
BanII GRGCYC 1 cut(s) 1849
BbsI GAAGAC 1 cut(s) 1682
Bbv12I GWGCWC 4 cut(s) 565, 1569, 1612, 1849
BbvCI CCTCAGC 1 cut(s) 1750
BbvI GCAGC 5 cut(s) 199, 1277, 1628, 1766, 1846
BccI CCATC 5 cut(s) 365, 1075, 1252, 1417, 1546
BceAI ACGGC 2 cut(s) 129, 2157
BciT130I CCWGG 2 cut(s) 933, 1646
BciVI GTATCC 1 cut(s) 1658
BcoDI GTCTC 1 cut(s) 872
BfaI CTAG 2 cut(s) 1542, 1680
BfmI CTRYAG 1 cut(s) 277
BfuAI ACCTGC 1 cut(s) 799
BfuI GTATCC 1 cut(s) 1658
BglI GCCNNNNNGGC 1 cut(s) 2150
BisI GCNGC 5 cut(s) 213, 1266, 1617, 1755, 1835
BlsI GCNGC 5 cut(s) 214, 1267, 1618, 1756, 1836
BmcAI AGTACT 1 cut(s) 943
Bme1390I CCNGG 2 cut(s) 933, 1646
Bme18I GGWCC 3 cut(s) 1426, 1840, 1886
BmeT110I CYCGRG 1 cut(s) 2183
BmgT120I GGNCC 3 cut(s) 1426, 1840, 1886
BmiI GGNNCC 1 cut(s) 1035
BmrFI CCNGG 2 cut(s) 933, 1646
BmrI ACTGGG 2 cut(s) 24, 216
BmsI GCATC 7 cut(s) 510, 697, 900, 982, 991, 2047, 2163
BmuI ACTGGG 2 cut(s) 24, 216
BoxI GACNNNNGTC 1 cut(s) 1682
BpiI GAAGAC 1 cut(s) 1682
Bpu10I CCTNAGC 2 cut(s) 564, 1750
BpuEI CTTGAG 1 cut(s) 1690
BsaAI YACGTR 2 cut(s) 392, 1153
BsaBI GATNNNNATC 1 cut(s) 1632
BsaJI CCNNGG 5 cut(s) 111, 932, 996, 1645, 1660
BsaWI WCCGGW 3 cut(s) 826, 962, 1475
Bsc4I CCNNNNNNNGG 6 cut(s) 434, 435, 675, 1544, 1651, 2166
Bse118I RCCGGY 2 cut(s) 122, 1604
Bse1I ACTGG 3 cut(s) 30, 222, 589
Bse21I CCTNAGG 2 cut(s) 1029, 2196
Bse3DI GCAATG 5 cut(s) 699, 717, 792, 1599, 2154
Bse8I GATNNNNATC 1 cut(s) 1632
BseAI TCCGGA 1 cut(s) 1475
BseBI CCWGG 2 cut(s) 933, 1646
BseDI CCNNGG 5 cut(s) 111, 932, 996, 1645, 1660
BseGI GGATG 6 cut(s) 579, 997, 1006, 1197, 2062, 2098
BseJI GATNNNNATC 1 cut(s) 1632
BseLI CCNNNNNNNGG 6 cut(s) 434, 435, 675, 1544, 1651, 2166
BseMI GCAATG 5 cut(s) 699, 717, 792, 1599, 2154
BseMII CTCAG 5 cut(s) 578, 1020, 1764, 1957, 2187
BseNI ACTGG 3 cut(s) 30, 222, 589
BseXI GCAGC 5 cut(s) 199, 1277, 1628, 1766, 1846
BseYI CCCAGC 2 cut(s) 71, 154
BsgI GTGCAG 1 cut(s) 1095
BshFI GGCC 6 cut(s) 116, 1080, 1374, 1818, 2144, 2153
BsiHKAI GWGCWC 4 cut(s) 565, 1569, 1612, 1849
BsiHKCI CYCGRG 1 cut(s) 2183
BsiSI CCGG 6 cut(s) 123, 524, 827, 963, 1476, 1605
BslFI GGGAC 1 cut(s) 692
BslI CCNNNNNNNGG 6 cut(s) 434, 435, 675, 1544, 1651, 2166
BsmAI GTCTC 1 cut(s) 872
BsmFI GGGAC 1 cut(s) 692
BsmI GAATGC 4 cut(s) 622, 652, 850, 1004
BsnI GGCC 6 cut(s) 116, 1080, 1374, 1818, 2144, 2153
BsoBI CYCGRG 1 cut(s) 2183
Bsp1286I GDGCHC 4 cut(s) 565, 1569, 1612, 1849
Bsp13I TCCGGA 1 cut(s) 1475
Bsp143I GATC 5 cut(s) 834, 1033, 1627, 1716, 1990
Bsp19I CCATGG 1 cut(s) 1660
BspACI CCGC 4 cut(s) 138, 186, 571, 2043
BspANI GGCC 6 cut(s) 116, 1080, 1374, 1818, 2144, 2153
BspCNI CTCAG 5 cut(s) 577, 1021, 1763, 1956, 2188
BspEI TCCGGA 1 cut(s) 1475
BspHI TCATGA 3 cut(s) 759, 1558, 1738
BspLI GGNNCC 1 cut(s) 1035
BspMI ACCTGC 1 cut(s) 799
BspPI GGATC 2 cut(s) 1028, 1041
BspQI GCTCTTC 2 cut(s) 251, 897
BsrDI GCAATG 5 cut(s) 699, 717, 792, 1599, 2154
BsrFI RCCGGY 2 cut(s) 122, 1604
BsrI ACTGG 3 cut(s) 30, 222, 589
BssAI RCCGGY 2 cut(s) 122, 1604
BssECI CCNNGG 5 cut(s) 111, 932, 996, 1645, 1660
BssMI GATC 5 cut(s) 834, 1033, 1627, 1716, 1990
BssT1I CCWWGG 2 cut(s) 996, 1660
Bst2UI CCWGG 2 cut(s) 933, 1646
Bst4CI ACNGT 4 cut(s) 278, 424, 547, 700
Bst6I CTCTTC 5 cut(s) 251, 359, 774, 897, 1948
BstAPI GCANNNNNTGC 1 cut(s) 1622
BstBAI YACGTR 2 cut(s) 392, 1153
BstC8I GCNNGC 5 cut(s) 348, 1057, 1078, 1372, 1816
BstDSI CCRYGG 2 cut(s) 111, 1660
BstF5I GGATG 6 cut(s) 579, 997, 1006, 1197, 2062, 2098
BstHHI GCGC 2 cut(s) 652, 850
BstKTI GATC 5 cut(s) 837, 1036, 1630, 1719, 1993
BstMAI GTCTC 1 cut(s) 872
BstMBI GATC 5 cut(s) 834, 1033, 1627, 1716, 1990
BstNI CCWGG 2 cut(s) 933, 1646
BstNSI RCATGY 2 cut(s) 1726, 2032
BstPAI GACNNNNGTC 1 cut(s) 1682
BstSCI CCNGG 2 cut(s) 931, 1644
BstSFI CTRYAG 1 cut(s) 277
BstV1I GCAGC 5 cut(s) 199, 1277, 1628, 1766, 1846
BstV2I GAAGAC 1 cut(s) 1682
BstX2I RGATCY 1 cut(s) 1033
BstYI RGATCY 1 cut(s) 1033
Bsu36I CCTNAGG 2 cut(s) 1029, 2196
BsuI GTATCC 1 cut(s) 1658
BsuRI GGCC 6 cut(s) 116, 1080, 1374, 1818, 2144, 2153
BtgI CCRYGG 2 cut(s) 111, 1660
BtsCI GGATG 6 cut(s) 579, 997, 1006, 1197, 2062, 2098
BtsI GCAGTG 1 cut(s) 476
BtsIMutI CAGTG 1 cut(s) 476
BveI ACCTGC 1 cut(s) 799
Cac8I GCNNGC 5 cut(s) 348, 1057, 1078, 1372, 1816
CciI TCATGA 3 cut(s) 759, 1558, 1738
CfoI GCGC 2 cut(s) 652, 850
Cfr10I RCCGGY 2 cut(s) 122, 1604
Cfr13I GGNCC 3 cut(s) 1426, 1840, 1886
CseI GACGC 2 cut(s) 1118, 1672
Csp6I GTAC 2 cut(s) 425, 942
CviQI GTAC 2 cut(s) 425, 942
DpnI GATC 5 cut(s) 836, 1035, 1629, 1718, 1992
DpnII GATC 5 cut(s) 834, 1033, 1627, 1716, 1990
DraI TTTAAA 1 cut(s) 1092
EaeI YGGCCR 3 cut(s) 114, 1372, 2142
Eam1104I CTCTTC 5 cut(s) 251, 359, 774, 897, 1948
EarI CTCTTC 5 cut(s) 251, 359, 774, 897, 1948
Ecl136II GAGCTC 1 cut(s) 1847
Eco130I CCWWGG 2 cut(s) 996, 1660
Eco147I AGGCCT 1 cut(s) 1080
Eco24I GRGCYC 1 cut(s) 1849
Eco47I GGWCC 3 cut(s) 1426, 1840, 1886
Eco53kI GAGCTC 1 cut(s) 1847
Eco57I CTGAAG 4 cut(s) 275, 323, 878, 1145
Eco81I CCTNAGG 2 cut(s) 1029, 2196
Eco88I CYCGRG 1 cut(s) 2183
EcoICRI GAGCTC 1 cut(s) 1847
EcoRII CCWGG 2 cut(s) 931, 1644
EcoT14I CCWWGG 2 cut(s) 996, 1660
EcoT22I ATGCAT 2 cut(s) 1006, 1323
EcoT38I GRGCYC 1 cut(s) 1849
ErhI CCWWGG 2 cut(s) 996, 1660
FalI AAGNNNNNCTT 4 cut(s) 604, 636, 1866, 1898
FaqI GGGAC 1 cut(s) 692
FauI CCCGC 1 cut(s) 193
FauNDI CATATG 1 cut(s) 1405
FblI GTMKAC 1 cut(s) 280
Fnu4HI GCNGC 5 cut(s) 213, 1266, 1617, 1755, 1835
FokI GGATG 6 cut(s) 586, 1004, 1013, 1204, 2069, 2105
FriOI GRGCYC 1 cut(s) 1849
Fsp4HI GCNGC 5 cut(s) 213, 1266, 1617, 1755, 1835
FspBI CTAG 2 cut(s) 1542, 1680
GlaI GCGC 2 cut(s) 651, 849
GluI GCNGC 5 cut(s) 213, 1266, 1617, 1755, 1835
GsaI CCCAGC 2 cut(s) 75, 158
HaeIII GGCC 6 cut(s) 116, 1080, 1374, 1818, 2144, 2153
HapII CCGG 6 cut(s) 123, 524, 827, 963, 1476, 1605
HgaI GACGC 2 cut(s) 1118, 1672
HhaI GCGC 2 cut(s) 652, 850
Hin6I GCGC 2 cut(s) 650, 848
HinP1I GCGC 2 cut(s) 650, 848
HincII GTYRAC 1 cut(s) 1825
HindII GTYRAC 1 cut(s) 1825
HindIII AAGCTT 4 cut(s) 105, 312, 344, 1506
HinfI GANTC 4 cut(s) 595, 626, 954, 1981
HpaII CCGG 6 cut(s) 123, 524, 827, 963, 1476, 1605
HphI GGTGA 3 cut(s) 823, 1874, 1940
Hpy166II GTNNAC 3 cut(s) 281, 1150, 1825
Hpy188III TCNNGA 7 cut(s) 760, 1476, 1522, 1559, 1739, 1850, 1988
Hpy8I GTNNAC 3 cut(s) 281, 1150, 1825
Hpy99I CGWCG 1 cut(s) 1688
HpyAV CCTTC 7 cut(s) 761, 914, 1151, 1507, 1645, 1871, 2143
HpyCH4III ACNGT 4 cut(s) 278, 424, 547, 700
HpyCH4IV ACGT 6 cut(s) 391, 534, 1146, 1152, 1464, 1670
HpySE526I ACGT 6 cut(s) 391, 534, 1146, 1152, 1464, 1670
HspAI GCGC 2 cut(s) 650, 848
Kpn2I TCCGGA 1 cut(s) 1475
Kzo9I GATC 5 cut(s) 834, 1033, 1627, 1716, 1990
LguI GCTCTTC 2 cut(s) 251, 897
LmnI GCTCC 2 cut(s) 30, 1572
Lsp1109I GCAGC 5 cut(s) 199, 1277, 1628, 1766, 1846
LweI GCATC 7 cut(s) 510, 697, 900, 982, 991, 2047, 2163
MaeI CTAG 2 cut(s) 1542, 1680
MaeII ACGT 6 cut(s) 391, 534, 1146, 1152, 1464, 1670
MaeIII GTNAC 4 cut(s) 1045, 1547, 1897, 2178
MalI GATC 5 cut(s) 836, 1035, 1629, 1718, 1992
MboI GATC 5 cut(s) 834, 1033, 1627, 1716, 1990
MfeI CAATTG 2 cut(s) 670, 1050
MflI RGATCY 1 cut(s) 1033
MhlI GDGCHC 4 cut(s) 565, 1569, 1612, 1849
MlsI TGGCCA 1 cut(s) 1374
MluNI TGGCCA 1 cut(s) 1374
MlyI GAGTC 1 cut(s) 1990
MmeI TCCRAC 2 cut(s) 288, 1778
Mox20I TGGCCA 1 cut(s) 1374
Mph1103I ATGCAT 2 cut(s) 1006, 1323
MroI TCCGGA 1 cut(s) 1475
MroXI GAANNNNTTC 2 cut(s) 958, 1517
MscI TGGCCA 1 cut(s) 1374
MseI TTAA 7 cut(s) 578, 1091, 1166, 1469, 1632, 2085, 2129
MslI CAYNNNNRTG 3 cut(s) 809, 1244, 1326
Msp20I TGGCCA 1 cut(s) 1374
MspA1I CMGCKG 2 cut(s) 1135, 1837
MspI CCGG 6 cut(s) 123, 524, 827, 963, 1476, 1605
MspR9I CCNGG 2 cut(s) 933, 1646
MunI CAATTG 2 cut(s) 670, 1050
Mva1269I GAATGC 4 cut(s) 622, 652, 850, 1004
MvaI CCWGG 2 cut(s) 933, 1646
NcoI CCATGG 1 cut(s) 1660
NdeI CATATG 1 cut(s) 1405
NdeII GATC 5 cut(s) 834, 1033, 1627, 1716, 1990
NlaIV GGNNCC 1 cut(s) 1035
NmeAIII GCCGAG 1 cut(s) 1252
NsiI ATGCAT 2 cut(s) 1006, 1323
NspI RCATGY 2 cut(s) 1726, 2032
PagI TCATGA 3 cut(s) 759, 1558, 1738
PaqCI CACCTGC 1 cut(s) 799
PceI AGGCCT 1 cut(s) 1080
PciI ACATGT 1 cut(s) 1722
PciSI GCTCTTC 2 cut(s) 251, 897
PctI GAATGC 4 cut(s) 622, 652, 850, 1004
PdmI GAANNNNTTC 2 cut(s) 958, 1517
PfeI GAWTC 3 cut(s) 595, 626, 954
PflMI CCANNNNNTGG 1 cut(s) 1544
PkrI GCNGC 5 cut(s) 214, 1267, 1618, 1756, 1836
PleI GAGTC 1 cut(s) 1989
PpsI GAGTC 1 cut(s) 1989
Ppu21I YACGTR 2 cut(s) 392, 1153
PscI ACATGT 1 cut(s) 1722
PshAI GACNNNNGTC 1 cut(s) 1682
PsiI TTATAA 1 cut(s) 1356
Psp124BI GAGCTC 1 cut(s) 1849
Psp1406I AACGTT 2 cut(s) 1146, 1464
Psp6I CCWGG 2 cut(s) 931, 1644
PspFI CCCAGC 2 cut(s) 71, 154
PspGI CCWGG 2 cut(s) 931, 1644
PspN4I GGNNCC 1 cut(s) 1035
PspPI GGNCC 3 cut(s) 1426, 1840, 1886
PsuI RGATCY 1 cut(s) 1033
PvuII CAGCTG 2 cut(s) 1135, 1837
RsaI GTAC 2 cut(s) 426, 943
RsaNI GTAC 2 cut(s) 425, 942
RseI CAYNNNNRTG 3 cut(s) 809, 1244, 1326
SacI GAGCTC 1 cut(s) 1849
SapI GCTCTTC 2 cut(s) 251, 897
SaqAI TTAA 7 cut(s) 578, 1091, 1166, 1469, 1632, 2085, 2129
SatI GCNGC 5 cut(s) 213, 1266, 1617, 1755, 1835
Sau3AI GATC 5 cut(s) 834, 1033, 1627, 1716, 1990
Sau96I GGNCC 3 cut(s) 1426, 1840, 1886
ScaI AGTACT 1 cut(s) 943
SchI GAGTC 1 cut(s) 1990
ScrFI CCNGG 2 cut(s) 933, 1646
SduI GDGCHC 4 cut(s) 565, 1569, 1612, 1849
SfaNI GCATC 7 cut(s) 510, 697, 900, 982, 991, 2047, 2163
SfcI CTRYAG 1 cut(s) 277
SfiI GGCCNNNNNGGCC 1 cut(s) 2150
SinI GGWCC 3 cut(s) 1426, 1840, 1886
SmiMI CAYNNNNRTG 3 cut(s) 809, 1244, 1326
SmlI CTYRAG 1 cut(s) 1705
SmoI CTYRAG 1 cut(s) 1705
SseBI AGGCCT 1 cut(s) 1080
SsiI CCGC 4 cut(s) 138, 186, 571, 2043
SspI AATATT 2 cut(s) 1365, 1450
SspMI CTAG 2 cut(s) 1542, 1680
SstI GAGCTC 1 cut(s) 1849
StuI AGGCCT 1 cut(s) 1080
StyD4I CCNGG 2 cut(s) 931, 1644
StyI CCWWGG 2 cut(s) 996, 1660
TaaI ACNGT 4 cut(s) 278, 424, 547, 700
TaiI ACGT 6 cut(s) 394, 537, 1149, 1155, 1467, 1673
TaqI TCGA 5 cut(s) 362, 822, 1686, 1719, 1989
TaqII GACCGA 2 cut(s) 450, 1857
TatI WGTACW 1 cut(s) 941
TfiI GAWTC 3 cut(s) 595, 626, 954
Tru1I TTAA 7 cut(s) 578, 1091, 1166, 1469, 1632, 2085, 2129
Tru9I TTAA 7 cut(s) 578, 1091, 1166, 1469, 1632, 2085, 2129
TscAI CASTG 1 cut(s) 476
TseI GCWGC 5 cut(s) 212, 1265, 1616, 1754, 1834
TspDTI ATGAA 9 cut(s) 237, 278, 587, 723, 748, 776, 780, 1100, 1208
TspGWI ACGGA 3 cut(s) 883, 966, 2151
TspRI CASTG 1 cut(s) 476
Van91I CCANNNNNTGG 1 cut(s) 1544
VpaK11BI GGWCC 3 cut(s) 1426, 1840, 1886
XapI RAATTY 2 cut(s) 98, 285
XceI RCATGY 2 cut(s) 1726, 2032
XcmI CCANNNNNNNNNTGG 1 cut(s) 1382
XmiI GTMKAC 1 cut(s) 280
XmnI GAANNNNTTC 2 cut(s) 958, 1517
XspI CTAG 2 cut(s) 1542, 1680
ZrmI AGTACT 1 cut(s) 943
Zsp2I ATGCAT 2 cut(s) 1006, 1323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.