Serine hydroxymethyltransferase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G22020 AT1G22020 AT1G36370 |
| fragaria_vesca | FvH4_5g28970 FvH4_5g38450 FvH4_5g38450 |
| malus_domestica | MD04G1132900.v1.1 MD12G1145600.v1.1 |
| prunus_persica | Prupe.1G507500_v2.0.a1 Prupe.1G507600_v2.0.a1 |
| pyrus_communis | pycom04g12080 pycom12g13990 pycom15g32210 |
| rosa_chinensis | RchiOBHm_Chr7g0221291 RchiOBHm_Chr7g0240491 |
| rosa_laevigata | RLG00000000675 RLG00000002164 |
| rosa_multiflora | Rmu_sc0000324.1_g000020 Rmu_sc0005327.1_g000009 |
| rosa_roxburghii | Rroxscaffold_3G00219940 Rroxscaffold_3G00238440 |
| rosa_rugosa | Rorug07G0202000 Rorug07G0336600 |
| rosa_samantha | Rh7AG341100 Rh7AG491000 Rh7BG332100 Rh7BG463500 Rh7CG359000 Rh7CG507100 |
| rosa_wichuraiana | Rw7G029010 Rw7G041140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 750 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 326 |
| Acc65I | GGTACC | 2 cut(s) | 1307, 1460 |
| AccB1I | GGYRCC | 2 cut(s) | 1307, 1460 |
| AccBSI | CCGCTC | 1 cut(s) | 1343 |
| AccI | GTMKAC | 2 cut(s) | 612, 1089 |
| AccII | CGCG | 2 cut(s) | 281, 1014 |
| AclWI | GGATC | 2 cut(s) | 545, 1341 |
| AcsI | RAATTY | 5 cut(s) | 70, 160, 394, 601, 1517 |
| AcuI | CTGAAG | 1 cut(s) | 1559 |
| AfaI | GTAC | 4 cut(s) | 449, 592, 1309, 1462 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 285, 668, 767, 858, 859, 1025, 1633 |
| AgeI | ACCGGT | 1 cut(s) | 617 |
| AgsI | TTSAA | 7 cut(s) | 75, 166, 183, 367, 509, 993, 1640 |
| AjnI | CCWGG | 3 cut(s) | 697, 1441, 1666 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 434, 466 |
| AluBI | AGCT | 7 cut(s) | 63, 410, 422, 790, 1226, 1265, 1573 |
| AluI | AGCT | 7 cut(s) | 63, 410, 422, 790, 1226, 1265, 1573 |
| Alw21I | GWGCWC | 3 cut(s) | 65, 532, 1077 |
| Alw26I | GTCTC | 7 cut(s) | 8, 132, 718, 1013, 1443, 1499, 1601 |
| Alw44I | GTGCAC | 2 cut(s) | 528, 1073 |
| AlwI | GGATC | 2 cut(s) | 545, 1341 |
| Ama87I | CYCGRG | 1 cut(s) | 852 |
| AoxI | GGCC | 2 cut(s) | 25, 1257 |
| ApaLI | GTGCAC | 2 cut(s) | 528, 1073 |
| ApeKI | GCWGC | 4 cut(s) | 91, 944, 1178, 1532 |
| ApoI | RAATTY | 5 cut(s) | 70, 160, 394, 601, 1517 |
| AsiGI | ACCGGT | 1 cut(s) | 617 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1521 |
| Asp718I | GGTACC | 2 cut(s) | 1307, 1460 |
| AspA2I | CCTAGG | 1 cut(s) | 1019 |
| AspLEI | GCGC | 1 cut(s) | 539 |
| AspS9I | GGNCC | 5 cut(s) | 25, 319, 328, 1016, 1157 |
| AsuC2I | CCSGG | 6 cut(s) | 24, 214, 323, 465, 853, 854 |
| AsuHPI | GGTGA | 4 cut(s) | 766, 1252, 1309, 1433 |
| AvaI | CYCGRG | 1 cut(s) | 852 |
| AvaII | GGWCC | 4 cut(s) | 319, 328, 1016, 1157 |
| AvrII | CCTAGG | 1 cut(s) | 1019 |
| BaeGI | GKGCMC | 2 cut(s) | 532, 1077 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 574, 607 |
| BanI | GGYRCC | 2 cut(s) | 1307, 1460 |
| BanII | GRGCYC | 1 cut(s) | 65 |
| BbsI | GAAGAC | 2 cut(s) | 159, 614 |
| Bbv12I | GWGCWC | 3 cut(s) | 65, 532, 1077 |
| BbvI | GCAGC | 4 cut(s) | 78, 956, 1165, 1519 |
| BccI | CCATC | 2 cut(s) | 238, 250 |
| BceAI | ACGGC | 1 cut(s) | 887 |
| BciT130I | CCWGG | 3 cut(s) | 699, 1443, 1668 |
| BciVI | GTATCC | 1 cut(s) | 764 |
| BclI | TGATCA | 1 cut(s) | 499 |
| BcnI | CCSGG | 6 cut(s) | 24, 214, 323, 465, 853, 854 |
| BcoDI | GTCTC | 7 cut(s) | 8, 132, 718, 1013, 1443, 1499, 1601 |
| BfaI | CTAG | 4 cut(s) | 35, 870, 960, 1020 |
| BfmI | CTRYAG | 1 cut(s) | 1039 |
| BfoI | RGCGCY | 1 cut(s) | 540 |
| BfuI | GTATCC | 1 cut(s) | 764 |
| BisI | GCNGC | 6 cut(s) | 92, 279, 720, 945, 1179, 1533 |
| BlnI | CCTAGG | 1 cut(s) | 1019 |
| BlsI | GCNGC | 6 cut(s) | 93, 280, 721, 946, 1180, 1534 |
| BmcAI | AGTACT | 1 cut(s) | 449 |
| Bme1390I | CCNGG | 9 cut(s) | 24, 214, 323, 465, 699, 853, 854, 1443, 1668 |
| Bme18I | GGWCC | 4 cut(s) | 319, 328, 1016, 1157 |
| BmeT110I | CYCGRG | 1 cut(s) | 852 |
| BmgT120I | GGNCC | 5 cut(s) | 25, 319, 328, 1016, 1157 |
| BmiI | GGNNCC | 6 cut(s) | 299, 321, 901, 1159, 1309, 1462 |
| BmrFI | CCNGG | 9 cut(s) | 24, 214, 323, 465, 699, 853, 854, 1443, 1668 |
| BmrI | ACTGGG | 2 cut(s) | 542, 1648 |
| BmsI | GCATC | 4 cut(s) | 58, 364, 381, 1658 |
| BmuI | ACTGGG | 2 cut(s) | 542, 1648 |
| BpiI | GAAGAC | 2 cut(s) | 159, 614 |
| BpmI | CTGGAG | 4 cut(s) | 284, 687, 1197, 1583 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1261 |
| BpuEI | CTTGAG | 1 cut(s) | 812 |
| BpuMI | CCSGG | 6 cut(s) | 24, 214, 323, 465, 853, 854 |
| Bsa29I | ATCGAT | 1 cut(s) | 777 |
| BsaI | GGTCTC | 2 cut(s) | 718, 1601 |
| BsaJI | CCNNGG | 8 cut(s) | 279, 453, 851, 852, 948, 1012, 1019, 1442 |
| BsaWI | WCCGGW | 1 cut(s) | 617 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 434, 464 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 285, 668, 767, 858, 859, 1025, 1633 |
| Bse118I | RCCGGY | 1 cut(s) | 617 |
| Bse1I | ACTGG | 5 cut(s) | 361, 487, 537, 1306, 1654 |
| Bse3DI | GCAATG | 1 cut(s) | 1668 |
| BseBI | CCWGG | 3 cut(s) | 699, 1443, 1668 |
| BseCI | ATCGAT | 1 cut(s) | 777 |
| BseDI | CCNNGG | 8 cut(s) | 279, 453, 851, 852, 948, 1012, 1019, 1442 |
| BseGI | GGATG | 4 cut(s) | 211, 1490, 1649, 1676 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 285, 668, 767, 858, 859, 1025, 1633 |
| BseMI | GCAATG | 1 cut(s) | 1668 |
| BseMII | CTCAG | 3 cut(s) | 32, 381, 1550 |
| BseNI | ACTGG | 5 cut(s) | 361, 487, 537, 1306, 1654 |
| BseRI | GAGGAG | 1 cut(s) | 809 |
| BseSI | GKGCMC | 2 cut(s) | 532, 1077 |
| BseXI | GCAGC | 4 cut(s) | 78, 956, 1165, 1519 |
| BsgI | GTGCAG | 2 cut(s) | 424, 1309 |
| Bsh1236I | CGCG | 2 cut(s) | 281, 1014 |
| Bsh1285I | CGRYCG | 1 cut(s) | 249 |
| BshFI | GGCC | 2 cut(s) | 27, 1259 |
| BshNI | GGYRCC | 2 cut(s) | 1307, 1460 |
| BshTI | ACCGGT | 1 cut(s) | 617 |
| BshVI | ATCGAT | 1 cut(s) | 777 |
| BsiEI | CGRYCG | 1 cut(s) | 249 |
| BsiHKAI | GWGCWC | 3 cut(s) | 65, 532, 1077 |
| BsiHKCI | CYCGRG | 1 cut(s) | 852 |
| BsiSI | CCGG | 6 cut(s) | 23, 213, 323, 464, 618, 853 |
| BslFI | GGGAC | 1 cut(s) | 1143 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 285, 668, 767, 858, 859, 1025, 1633 |
| BsmAI | GTCTC | 7 cut(s) | 8, 132, 718, 1013, 1443, 1499, 1601 |
| BsmBI | CGTCTC | 1 cut(s) | 132 |
| BsmFI | GGGAC | 1 cut(s) | 1143 |
| BsmI | GAATGC | 1 cut(s) | 178 |
| BsnI | GGCC | 2 cut(s) | 27, 1259 |
| Bso31I | GGTCTC | 2 cut(s) | 718, 1601 |
| BsoBI | CYCGRG | 1 cut(s) | 852 |
| Bsp1286I | GDGCHC | 3 cut(s) | 65, 532, 1077 |
| Bsp143I | GATC | 5 cut(s) | 142, 499, 550, 637, 1333 |
| BspANI | GGCC | 2 cut(s) | 27, 1259 |
| BspCNI | CTCAG | 3 cut(s) | 31, 382, 1549 |
| BspDI | ATCGAT | 1 cut(s) | 777 |
| BspFNI | CGCG | 2 cut(s) | 281, 1014 |
| BspLI | GGNNCC | 6 cut(s) | 299, 321, 901, 1159, 1309, 1462 |
| BspPI | GGATC | 2 cut(s) | 545, 1341 |
| BspQI | GCTCTTC | 1 cut(s) | 108 |
| BspT107I | GGYRCC | 2 cut(s) | 1307, 1460 |
| BspTNI | GGTCTC | 2 cut(s) | 718, 1601 |
| BsrBI | CCGCTC | 1 cut(s) | 1343 |
| BsrDI | GCAATG | 1 cut(s) | 1668 |
| BsrFI | RCCGGY | 1 cut(s) | 617 |
| BsrI | ACTGG | 5 cut(s) | 361, 487, 537, 1306, 1654 |
| BssAI | RCCGGY | 1 cut(s) | 617 |
| BssECI | CCNNGG | 8 cut(s) | 279, 453, 851, 852, 948, 1012, 1019, 1442 |
| BssMI | GATC | 5 cut(s) | 142, 499, 550, 637, 1333 |
| BssT1I | CCWWGG | 2 cut(s) | 948, 1019 |
| Bst2UI | CCWGG | 3 cut(s) | 699, 1443, 1668 |
| Bst4CI | ACNGT | 4 cut(s) | 56, 740, 1094, 1546 |
| Bst6I | CTCTTC | 2 cut(s) | 108, 1238 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1072 |
| BstC8I | GCNNGC | 4 cut(s) | 47, 276, 528, 1073 |
| BstDEI | CTNAG | 6 cut(s) | 18, 172, 390, 1261, 1526, 1536 |
| BstDSI | CCRYGG | 2 cut(s) | 279, 1012 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 666, 1023 |
| BstF5I | GGATG | 4 cut(s) | 211, 1490, 1649, 1676 |
| BstFNI | CGCG | 2 cut(s) | 281, 1014 |
| BstH2I | RGCGCY | 1 cut(s) | 540 |
| BstHHI | GCGC | 1 cut(s) | 539 |
| BstKTI | GATC | 5 cut(s) | 145, 502, 553, 640, 1336 |
| BstMAI | GTCTC | 7 cut(s) | 8, 132, 718, 1013, 1443, 1499, 1601 |
| BstMBI | GATC | 5 cut(s) | 142, 499, 550, 637, 1333 |
| BstMCI | CGRYCG | 1 cut(s) | 249 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 97, 275, 536, 605, 1072, 1184 |
| BstNI | CCWGG | 3 cut(s) | 699, 1443, 1668 |
| BstSCI | CCNGG | 9 cut(s) | 22, 212, 321, 463, 697, 851, 852, 1441, 1666 |
| BstSFI | CTRYAG | 1 cut(s) | 1039 |
| BstSLI | GKGCMC | 2 cut(s) | 532, 1077 |
| BstUI | CGCG | 2 cut(s) | 281, 1014 |
| BstV1I | GCAGC | 4 cut(s) | 78, 956, 1165, 1519 |
| BstV2I | GAAGAC | 2 cut(s) | 159, 614 |
| BstX2I | RGATCY | 1 cut(s) | 1333 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 561 |
| BstYI | RGATCY | 1 cut(s) | 1333 |
| Bsu15I | ATCGAT | 1 cut(s) | 777 |
| BsuI | GTATCC | 1 cut(s) | 764 |
| BsuRI | GGCC | 2 cut(s) | 27, 1259 |
| BsuTUI | ATCGAT | 1 cut(s) | 777 |
| BtgI | CCRYGG | 2 cut(s) | 279, 1012 |
| BtgZI | GCGATG | 1 cut(s) | 341 |
| BtsCI | GGATG | 4 cut(s) | 211, 1490, 1649, 1676 |
| BtsIMutI | CAGTG | 2 cut(s) | 480, 530 |
| Cac8I | GCNNGC | 4 cut(s) | 47, 276, 528, 1073 |
| CfoI | GCGC | 1 cut(s) | 539 |
| Cfr10I | RCCGGY | 1 cut(s) | 617 |
| Cfr13I | GGNCC | 5 cut(s) | 25, 319, 328, 1016, 1157 |
| Cfr42I | CCGCGG | 2 cut(s) | 282, 1015 |
| Cfr9I | CCCGGG | 1 cut(s) | 852 |
| ClaI | ATCGAT | 1 cut(s) | 777 |
| Csp6I | GTAC | 4 cut(s) | 448, 591, 1308, 1461 |
| CspAI | ACCGGT | 1 cut(s) | 617 |
| CviAII | CATG | 3 cut(s) | 332, 683, 919 |
| CviQI | GTAC | 4 cut(s) | 448, 591, 1308, 1461 |
| DdeI | CTNAG | 6 cut(s) | 18, 172, 390, 1261, 1526, 1536 |
| DpnI | GATC | 5 cut(s) | 144, 501, 552, 639, 1335 |
| DpnII | GATC | 5 cut(s) | 142, 499, 550, 637, 1333 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 326 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 326 |
| Eam1104I | CTCTTC | 2 cut(s) | 108, 1238 |
| EarI | CTCTTC | 2 cut(s) | 108, 1238 |
| EciI | GGCGGA | 1 cut(s) | 706 |
| Ecl136II | GAGCTC | 1 cut(s) | 63 |
| Eco130I | CCWWGG | 2 cut(s) | 948, 1019 |
| Eco147I | AGGCCT | 1 cut(s) | 1259 |
| Eco24I | GRGCYC | 1 cut(s) | 65 |
| Eco31I | GGTCTC | 2 cut(s) | 718, 1601 |
| Eco47I | GGWCC | 4 cut(s) | 319, 328, 1016, 1157 |
| Eco53kI | GAGCTC | 1 cut(s) | 63 |
| Eco57I | CTGAAG | 1 cut(s) | 1559 |
| Eco88I | CYCGRG | 1 cut(s) | 852 |
| EcoICRI | GAGCTC | 1 cut(s) | 63 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 666, 1023 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1157 |
| EcoRI | GAATTC | 1 cut(s) | 70 |
| EcoRII | CCWGG | 3 cut(s) | 697, 1441, 1666 |
| EcoT14I | CCWWGG | 2 cut(s) | 948, 1019 |
| EcoT38I | GRGCYC | 1 cut(s) | 65 |
| ErhI | CCWWGG | 2 cut(s) | 948, 1019 |
| Esp3I | CGTCTC | 1 cut(s) | 132 |
| FaeI | CATG | 3 cut(s) | 335, 686, 922 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1112, 1144 |
| FaqI | GGGAC | 1 cut(s) | 1143 |
| FatI | CATG | 3 cut(s) | 331, 682, 918 |
| FauI | CCCGC | 1 cut(s) | 695 |
| FauNDI | CATATG | 1 cut(s) | 675 |
| FbaI | TGATCA | 1 cut(s) | 499 |
| FblI | GTMKAC | 2 cut(s) | 612, 1089 |
| Fnu4HI | GCNGC | 6 cut(s) | 92, 279, 720, 945, 1179, 1533 |
| FokI | GGATG | 3 cut(s) | 218, 1497, 1636 |
| FriOI | GRGCYC | 1 cut(s) | 65 |
| Fsp4HI | GCNGC | 6 cut(s) | 92, 279, 720, 945, 1179, 1533 |
| FspBI | CTAG | 4 cut(s) | 35, 870, 960, 1020 |
| GlaI | GCGC | 1 cut(s) | 538 |
| GluI | GCNGC | 6 cut(s) | 92, 279, 720, 945, 1179, 1533 |
| GsuI | CTGGAG | 4 cut(s) | 284, 687, 1197, 1583 |
| HaeII | RGCGCY | 1 cut(s) | 540 |
| HaeIII | GGCC | 2 cut(s) | 27, 1259 |
| HapII | CCGG | 6 cut(s) | 23, 213, 323, 464, 618, 853 |
| HhaI | GCGC | 1 cut(s) | 539 |
| Hin1II | CATG | 3 cut(s) | 335, 686, 922 |
| Hin6I | GCGC | 1 cut(s) | 537 |
| HinP1I | GCGC | 1 cut(s) | 537 |
| HincII | GTYRAC | 1 cut(s) | 1621 |
| HindII | GTYRAC | 1 cut(s) | 1621 |
| HindIII | AAGCTT | 3 cut(s) | 788, 1224, 1571 |
| HinfI | GANTC | 3 cut(s) | 16, 656, 679 |
| HpaII | CCGG | 6 cut(s) | 23, 213, 323, 464, 618, 853 |
| HphI | GGTGA | 4 cut(s) | 766, 1252, 1309, 1433 |
| Hpy166II | GTNNAC | 7 cut(s) | 219, 530, 613, 757, 1075, 1090, 1621 |
| Hpy188III | TCNNGA | 6 cut(s) | 146, 548, 554, 666, 1214, 1600 |
| Hpy8I | GTNNAC | 7 cut(s) | 219, 530, 613, 757, 1075, 1090, 1621 |
| Hpy99I | CGWCG | 2 cut(s) | 70, 152 |
| HpyAV | CCTTC | 4 cut(s) | 340, 409, 672, 703 |
| HpyCH4III | ACNGT | 4 cut(s) | 56, 740, 1094, 1546 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 97, 275, 536, 605, 1072, 1184 |
| HpyF3I | CTNAG | 6 cut(s) | 18, 172, 390, 1261, 1526, 1536 |
| Hsp92II | CATG | 3 cut(s) | 335, 686, 922 |
| HspAI | GCGC | 1 cut(s) | 537 |
| KpnI | GGTACC | 2 cut(s) | 1311, 1464 |
| Ksp22I | TGATCA | 1 cut(s) | 499 |
| KspI | CCGCGG | 2 cut(s) | 282, 1015 |
| Kzo9I | GATC | 5 cut(s) | 142, 499, 550, 637, 1333 |
| LguI | GCTCTTC | 1 cut(s) | 108 |
| LmnI | GCTCC | 3 cut(s) | 467, 633, 899 |
| Lsp1109I | GCAGC | 4 cut(s) | 78, 956, 1165, 1519 |
| LweI | GCATC | 4 cut(s) | 58, 364, 381, 1658 |
| MaeI | CTAG | 4 cut(s) | 35, 870, 960, 1020 |
| MaeIII | GTNAC | 4 cut(s) | 431, 914, 985, 1297 |
| MalI | GATC | 5 cut(s) | 144, 501, 552, 639, 1335 |
| MbiI | CCGCTC | 1 cut(s) | 1343 |
| MboI | GATC | 5 cut(s) | 142, 499, 550, 637, 1333 |
| MboII | GAAGA | 7 cut(s) | 125, 164, 614, 718, 1255, 1293, 1514 |
| MfeI | CAATTG | 1 cut(s) | 95 |
| MflI | RGATCY | 1 cut(s) | 1333 |
| MhlI | GDGCHC | 3 cut(s) | 65, 532, 1077 |
| MlyI | GAGTC | 2 cut(s) | 10, 688 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1521 |
| MseI | TTAA | 7 cut(s) | 570, 1058, 1196, 1277, 1352, 1548, 1681 |
| MslI | CAYNNNNRTG | 2 cut(s) | 235, 1083 |
| MspA1I | CMGCKG | 4 cut(s) | 91, 281, 933, 1014 |
| MspI | CCGG | 6 cut(s) | 23, 213, 323, 464, 618, 853 |
| MspR9I | CCNGG | 9 cut(s) | 24, 214, 323, 465, 699, 853, 854, 1443, 1668 |
| MunI | CAATTG | 1 cut(s) | 95 |
| Mva1269I | GAATGC | 1 cut(s) | 178 |
| MvaI | CCWGG | 3 cut(s) | 699, 1443, 1668 |
| MvnI | CGCG | 2 cut(s) | 281, 1014 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 97, 275, 536, 605, 1072, 1184 |
| NciI | CCSGG | 6 cut(s) | 24, 214, 323, 465, 853, 854 |
| NdeI | CATATG | 1 cut(s) | 675 |
| NdeII | GATC | 5 cut(s) | 142, 499, 550, 637, 1333 |
| NlaIII | CATG | 3 cut(s) | 335, 686, 922 |
| NlaIV | GGNNCC | 6 cut(s) | 299, 321, 901, 1159, 1309, 1462 |
| NmuCI | GTSAC | 3 cut(s) | 431, 914, 1297 |
| PceI | AGGCCT | 1 cut(s) | 1259 |
| PciSI | GCTCTTC | 1 cut(s) | 108 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 65, 147, 153 |
| PctI | GAATGC | 1 cut(s) | 178 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1521 |
| PfeI | GAWTC | 1 cut(s) | 656 |
| PinAI | ACCGGT | 1 cut(s) | 617 |
| PkrI | GCNGC | 6 cut(s) | 93, 280, 721, 946, 1180, 1534 |
| PleI | GAGTC | 2 cut(s) | 10, 687 |
| PpsI | GAGTC | 2 cut(s) | 10, 687 |
| PpuMI | RGGWCCY | 1 cut(s) | 1157 |
| PsiI | TTATAA | 1 cut(s) | 750 |
| Psp124BI | GAGCTC | 1 cut(s) | 65 |
| Psp5II | RGGWCCY | 1 cut(s) | 1157 |
| Psp6I | CCWGG | 3 cut(s) | 697, 1441, 1666 |
| PspGI | CCWGG | 3 cut(s) | 697, 1441, 1666 |
| PspN4I | GGNNCC | 6 cut(s) | 299, 321, 901, 1159, 1309, 1462 |
| PspPI | GGNCC | 5 cut(s) | 25, 319, 328, 1016, 1157 |
| PspPPI | RGGWCCY | 1 cut(s) | 1157 |
| PsuI | RGATCY | 1 cut(s) | 1333 |
| RsaI | GTAC | 4 cut(s) | 449, 592, 1309, 1462 |
| RsaNI | GTAC | 4 cut(s) | 448, 591, 1308, 1461 |
| RseI | CAYNNNNRTG | 2 cut(s) | 235, 1083 |
| SacI | GAGCTC | 1 cut(s) | 65 |
| SacII | CCGCGG | 2 cut(s) | 282, 1015 |
| SapI | GCTCTTC | 1 cut(s) | 108 |
| SaqAI | TTAA | 7 cut(s) | 570, 1058, 1196, 1277, 1352, 1548, 1681 |
| SatI | GCNGC | 6 cut(s) | 92, 279, 720, 945, 1179, 1533 |
| Sau3AI | GATC | 5 cut(s) | 142, 499, 550, 637, 1333 |
| Sau96I | GGNCC | 5 cut(s) | 25, 319, 328, 1016, 1157 |
| ScaI | AGTACT | 1 cut(s) | 449 |
| SchI | GAGTC | 2 cut(s) | 10, 688 |
| ScrFI | CCNGG | 9 cut(s) | 24, 214, 323, 465, 699, 853, 854, 1443, 1668 |
| SduI | GDGCHC | 3 cut(s) | 65, 532, 1077 |
| SfaNI | GCATC | 4 cut(s) | 58, 364, 381, 1658 |
| SfcI | CTRYAG | 1 cut(s) | 1039 |
| Sfr303I | CCGCGG | 2 cut(s) | 282, 1015 |
| SgrBI | CCGCGG | 2 cut(s) | 282, 1015 |
| SinI | GGWCC | 4 cut(s) | 319, 328, 1016, 1157 |
| SmaI | CCCGGG | 1 cut(s) | 854 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 235, 1083 |
| SmlI | CTYRAG | 1 cut(s) | 791 |
| SmoI | CTYRAG | 1 cut(s) | 791 |
| SseBI | AGGCCT | 1 cut(s) | 1259 |
| SspMI | CTAG | 4 cut(s) | 35, 870, 960, 1020 |
| SstI | GAGCTC | 1 cut(s) | 65 |
| StuI | AGGCCT | 1 cut(s) | 1259 |
| StyD4I | CCNGG | 9 cut(s) | 22, 212, 321, 463, 697, 851, 852, 1441, 1666 |
| StyI | CCWWGG | 2 cut(s) | 948, 1019 |
| TaaI | ACNGT | 4 cut(s) | 56, 740, 1094, 1546 |
| TaqI | TCGA | 7 cut(s) | 59, 68, 102, 249, 375, 725, 777 |
| TaqII | GACCGA | 1 cut(s) | 276 |
| TatI | WGTACW | 1 cut(s) | 447 |
| TauI | GCSGC | 2 cut(s) | 281, 722 |
| TfiI | GAWTC | 1 cut(s) | 656 |
| Tru1I | TTAA | 7 cut(s) | 570, 1058, 1196, 1277, 1352, 1548, 1681 |
| Tru9I | TTAA | 7 cut(s) | 570, 1058, 1196, 1277, 1352, 1548, 1681 |
| TscAI | CASTG | 2 cut(s) | 487, 537 |
| TseFI | GTSAC | 3 cut(s) | 431, 914, 1297 |
| TseI | GCWGC | 4 cut(s) | 91, 944, 1178, 1532 |
| Tsp45I | GTSAC | 3 cut(s) | 431, 914, 1297 |
| TspDTI | ATGAA | 2 cut(s) | 348, 834 |
| TspGWI | ACGGA | 3 cut(s) | 26, 73, 954 |
| TspMI | CCCGGG | 1 cut(s) | 852 |
| TspRI | CASTG | 2 cut(s) | 487, 537 |
| VneI | GTGCAC | 2 cut(s) | 528, 1073 |
| VpaK11BI | GGWCC | 4 cut(s) | 319, 328, 1016, 1157 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 666, 1023 |
| XapI | RAATTY | 5 cut(s) | 70, 160, 394, 601, 1517 |
| XmaI | CCCGGG | 1 cut(s) | 852 |
| XmaJI | CCTAGG | 1 cut(s) | 1019 |
| XmiI | GTMKAC | 2 cut(s) | 612, 1089 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1521 |
| XspI | CTAG | 4 cut(s) | 35, 870, 960, 1020 |
| ZrmI | AGTACT | 1 cut(s) | 449 |