Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0004637

Physical Location & Seq

Genomic Coordinates Reverse (-)

54928392 .. 54934730

Gene Structure 6339 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG463500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGGATTTCTCCGGGGCTCAGCCGGGTCTGTTTCTCGGGCTCAACTCGCATCAGAGTTCAATTCCGACGAATTGTAATCAATCCGTGCCGCTACAGCTGCTGAAGGAGGAGAATATTAGGGCTGAGAATGGAGACGATCGCGAGGAGGAGGAGGAGGAGGAAGAAGATGAGAGTGAGAGATTCAATCTTTTAGGGCACTCAATTTGCCCCAAAAGGCCGAGGGACCTGTCGTCGCCCTTCAATCAGCCTCCTGCCAAGTGCGCGGCGGTTGAATCGGAGGGGCTGGAGGCGCGGCGGGCCGCGGTGAGGGCCTGGGGGAACCAGCCGCTTGCGGTGGCGGACCCGGAGATTCATGAAATGATGGAGAAGGAGAGGCGTAGGCAGTTCAAAGGGATCGAATTGATTGCTTCGGAGAATTTCGTGTGTAGGGCTGTGATGGAAGCTCTGGGAAGCCACTTGACGAATAAGTATTCGGAGGGGTTCCCCGGAGGGAGGTACTATACTGGTAATCAGCATATTGATCAGATTGAATTGCTCTGCTGTGAGAGGGCATTGGCTGCTTTTAGTCTCGATCCTGAGAAATGGGGGGTCAATGTTCAGCCTTACTCTTGTACTTCAGCTAATTTCGCAGTCTACACTGGTCTTTTGCTCCCAAATGAACGGATTATGGGTTTGGATTCGCCGTCCGGAGGACACATGAGTCATGGTTATTATACTCCTAGTGGGAAGAAGGTGTCTGCCGCATCGATATTCTTTGATAGTCTTCCTTATAAGGTGAACCCCCGCACGGGGCTCATTGATTATGATAAGCTTGAGGAGAAGGCGCTTGATTATCGCCCCAAGATACTTATTTGCGGCGGGAGTTCGTATCCCCGGGAGTGGGATTATGCCAGGTTTAGGTATGTTGCTGATAAATGCGGAGCTGTGCTGATGTGTGACATGGCTCATATCAGCGGCCTTATAGCAGCCAAGGAGTGTGCGAGTCCTTTTGATTATTGTGATATTGTTACGTCAACAACACACAAAAGCCTCCGGGGTCCTAGGGGAGGTATTATATTTTACCGGAAAGGTCCAAAAAGAAGGAAGCAAGGCATGCATCAATCAAATGGGGATGGAAATAACCTGTATGATTTTGAAGAAAAGATAAATTTCGCTGTTTTCCCATCGCTACAGGGTGGTCCTCACAACAACCATATTGCTGCTCTTGCCATAGCCTTAAAACAAGTGGCTACTCCAGAATATAAAGAATACATGAACCAGGTCAAGAAAAATGCACAGTCCTTGGCAAATGCTTTGTTAAGAAGAAAATGCAGATTGGTTACTGGGGGTACCGATAATCACTTGTTGCTTTGGGATCTTACAGCTCTTGGTATAACAGGTATTAATGATAACCAGCCCATTTTTCACAGGAGTGGGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004372 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005759 GO:0006730 GO:0006732 GO:0006790 GO:0008150 GO:0008152 GO:0009987 GO:0010035 GO:0010038 GO:0016740 GO:0016741 GO:0016742 GO:0017144 GO:0019219 GO:0019222 GO:0031323 GO:0031974 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044030 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046500 GO:0046686 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051052 GO:0051171 GO:0051186 GO:0055063 GO:0055081 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0072505 GO:0080090 GO:0098771

KEGG Pathways

Metabolic & Signaling

ko00260 ko00460 ko00630 ko00670 ko00680 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko01523 map00260 map00460 map00630 map00670 map00680 map01100 map01110 map01120 map01130 map01200 map01230 map01523

Pfam Domains

Protein Families

SHMT

Protein Analysis

473

Amino Acids

52.68

Weight (kDa)

6.3

Isoelectric Point (pI)

55.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SHMT	PF00464	111 - 462	7.9e-152	Serine hydroxymethyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004637)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22020 AT1G22020 AT1G36370
fragaria_vesca	FvH4_5g28970 FvH4_5g38450 FvH4_5g38450
malus_domestica	MD04G1132900.v1.1 MD12G1145600.v1.1
prunus_persica	Prupe.1G507500_v2.0.a1 Prupe.1G507600_v2.0.a1
pyrus_communis	pycom04g12080 pycom12g13990 pycom15g32210
rosa_chinensis	RchiOBHm_Chr7g0221291 RchiOBHm_Chr7g0240491
rosa_laevigata	RLG00000000675 RLG00000002164
rosa_multiflora	Rmu_sc0000324.1_g000020 Rmu_sc0005327.1_g000009
rosa_roxburghii	Rroxscaffold_3G00219940 Rroxscaffold_3G00238440
rosa_rugosa	Rorug07G0202000 Rorug07G0336600
rosa_samantha	Rh7AG341100 Rh7AG491000 Rh7BG332100 Rh7BG463500 Rh7CG359000 Rh7CG507100
rosa_wichuraiana	Rw7G029010 Rw7G041140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	771
AasI	GACNNNNNNGTC	1 cut(s)	699
Acc65I	GGTACC	1 cut(s)	1328
AccB1I	GGYRCC	1 cut(s)	1328
AccI	GTMKAC	1 cut(s)	633
AccII	CGCG	4 cut(s)	141, 263, 292, 302
AccIII	TCCGGA	1 cut(s)	686
AclWI	GGATC	3 cut(s)	401, 566, 1362
AcsI	RAATTY	2 cut(s)	415, 1147
AcuI	CTGAAG	2 cut(s)	122, 600
AfaI	GTAC	3 cut(s)	497, 613, 1330
AgsI	TTSAA	7 cut(s)	60, 184, 241, 272, 388, 530, 1136
AhdI	GACNNNNNGTC	1 cut(s)	229
AjnI	CCWGG	3 cut(s)	311, 890, 1257
AleI	CACNNNNGTG	1 cut(s)	1410
AluBI	AGCT	6 cut(s)	97, 443, 620, 811, 923, 1364
AluI	AGCT	6 cut(s)	97, 443, 620, 811, 923, 1364
Alw26I	GTCTC	2 cut(s)	126, 572
AlwI	GGATC	3 cut(s)	401, 566, 1362
AlwNI	CAGNNNCTG	1 cut(s)	100
Ama87I	CYCGRG	2 cut(s)	35, 873
Aor13HI	TCCGGA	1 cut(s)	686
AoxI	GGCC	4 cut(s)	215, 297, 309, 955
ApeKI	GCWGC	4 cut(s)	97, 557, 965, 1199
ApoI	RAATTY	2 cut(s)	415, 1147
AseI	ATTAAT	1 cut(s)	1383
Asp718I	GGTACC	1 cut(s)	1328
AspA2I	CCTAGG	1 cut(s)	1040
AspLEI	GCGC	3 cut(s)	263, 292, 826
AspS9I	GGNCC	7 cut(s)	223, 297, 309, 340, 1037, 1070, 1178
AsuC2I	CCSGG	7 cut(s)	13, 24, 344, 486, 874, 875, 1034
AsuHPI	GGTGA	2 cut(s)	316, 787
AvaI	CYCGRG	2 cut(s)	35, 873
AvaII	GGWCC	5 cut(s)	223, 340, 1037, 1070, 1178
AvrII	CCTAGG	1 cut(s)	1040
BaeGI	GKGCMC	1 cut(s)	198
BanI	GGYRCC	1 cut(s)	1328
BanII	GRGCYC	3 cut(s)	19, 42, 795
BbsI	GAAGAC	1 cut(s)	755
BbvI	GCAGC	4 cut(s)	84, 544, 977, 1186
BccI	CCATC	4 cut(s)	355, 430, 1106, 1171
BceAI	ACGGC	1 cut(s)	667
BcgI	CGANNNNNNTGC	2 cut(s)	386, 420
BciT130I	CCWGG	3 cut(s)	313, 892, 1259
BciVI	GTATCC	1 cut(s)	879
BclI	TGATCA	1 cut(s)	520
BcnI	CCSGG	7 cut(s)	13, 24, 344, 486, 874, 875, 1034
BcoDI	GTCTC	2 cut(s)	126, 572
BfaI	CTAG	2 cut(s)	720, 1041
BfmI	CTRYAG	2 cut(s)	92, 1169
BfoI	RGCGCY	1 cut(s)	827
BfuI	GTATCC	1 cut(s)	879
BlnI	CCTAGG	1 cut(s)	1040
BlpI	GCTNAGC	1 cut(s)	18
Bme18I	GGWCC	5 cut(s)	223, 340, 1037, 1070, 1178
BmeRI	GACNNNNNGTC	1 cut(s)	229
BmeT110I	CYCGRG	2 cut(s)	35, 873
BmgT120I	GGNCC	7 cut(s)	223, 297, 309, 340, 1037, 1070, 1178
BmiI	GGNNCC	6 cut(s)	224, 320, 342, 482, 1038, 1330
BmrI	ACTGGG	1 cut(s)	1332
BmsI	GCATC	3 cut(s)	58, 752, 1105
BmuI	ACTGGG	1 cut(s)	1332
BpiI	GAAGAC	1 cut(s)	755
BpmI	CTGGAG	2 cut(s)	305, 1218
Bpu1102I	GCTNAGC	1 cut(s)	18
BpuEI	CTTGAG	1 cut(s)	833
BpuMI	CCSGG	7 cut(s)	13, 24, 344, 486, 874, 875, 1034
Bsa29I	ATCGAT	1 cut(s)	746
BsaWI	WCCGGW	2 cut(s)	686, 1062
Bse1I	ACTGG	3 cut(s)	508, 643, 1327
BseAI	TCCGGA	1 cut(s)	686
BseBI	CCWGG	3 cut(s)	313, 892, 1259
BseCI	ATCGAT	1 cut(s)	746
BseGI	GGATG	1 cut(s)	1117
BseMII	CTCAG	3 cut(s)	32, 114, 567
BseNI	ACTGG	3 cut(s)	508, 643, 1327
BseRI	GAGGAG	7 cut(s)	122, 158, 161, 164, 167, 170, 830
BseSI	GKGCMC	1 cut(s)	198
BseXI	GCAGC	4 cut(s)	84, 544, 977, 1186
Bsh1236I	CGCG	4 cut(s)	141, 263, 292, 302
Bsh1285I	CGRYCG	1 cut(s)	139
BshFI	GGCC	4 cut(s)	217, 299, 311, 957
BshNI	GGYRCC	1 cut(s)	1328
BshVI	ATCGAT	1 cut(s)	746
BsiEI	CGRYCG	1 cut(s)	139
BsiHKCI	CYCGRG	2 cut(s)	35, 873
BsiSI	CCGG	8 cut(s)	12, 23, 344, 486, 687, 874, 1033, 1063
BslFI	GGGAC	1 cut(s)	236
BsmAI	GTCTC	2 cut(s)	126, 572
BsmBI	CGTCTC	1 cut(s)	126
BsmFI	GGGAC	1 cut(s)	236
BsnI	GGCC	4 cut(s)	217, 299, 311, 957
BsoBI	CYCGRG	2 cut(s)	35, 873
Bsp1286I	GDGCHC	4 cut(s)	19, 42, 198, 795
Bsp13I	TCCGGA	1 cut(s)	686
Bsp143I	GATC	5 cut(s)	136, 393, 520, 571, 1354
Bsp1720I	GCTNAGC	1 cut(s)	18
Bsp68I	TCGCGA	1 cut(s)	141
BspANI	GGCC	4 cut(s)	217, 299, 311, 957
BspCNI	CTCAG	3 cut(s)	31, 115, 568
BspDI	ATCGAT	1 cut(s)	746
BspEI	TCCGGA	1 cut(s)	686
BspFNI	CGCG	4 cut(s)	141, 263, 292, 302
BspHI	TCATGA	1 cut(s)	352
BspLI	GGNNCC	6 cut(s)	224, 320, 342, 482, 1038, 1330
BspPI	GGATC	3 cut(s)	401, 566, 1362
BspT107I	GGYRCC	1 cut(s)	1328
BsrI	ACTGG	3 cut(s)	508, 643, 1327
BssMI	GATC	5 cut(s)	136, 393, 520, 571, 1354
BssT1I	CCWWGG	3 cut(s)	969, 1040, 1281
Bst2UI	CCWGG	3 cut(s)	313, 892, 1259
Bst4CI	ACNGT	1 cut(s)	1278
BstAPI	GCANNNNNTGC	2 cut(s)	557, 1093
BstC8I	GCNNGC	3 cut(s)	297, 330, 1094
BstDEI	CTNAG	3 cut(s)	18, 123, 576
BstDSI	CCRYGG	1 cut(s)	300
BstENI	CCTNNNNNAGG	1 cut(s)	1044
BstF5I	GGATG	1 cut(s)	1117
BstFNI	CGCG	4 cut(s)	141, 263, 292, 302
BstH2I	RGCGCY	1 cut(s)	827
BstHHI	GCGC	3 cut(s)	263, 292, 826
BstKTI	GATC	5 cut(s)	139, 396, 523, 574, 1357
BstMAI	GTCTC	2 cut(s)	126, 572
BstMBI	GATC	5 cut(s)	136, 393, 520, 571, 1354
BstMCI	CGRYCG	1 cut(s)	139
BstNI	CCWGG	3 cut(s)	313, 892, 1259
BstNSI	RCATGY	1 cut(s)	1096
BstSFI	CTRYAG	2 cut(s)	92, 1169
BstSLI	GKGCMC	1 cut(s)	198
BstUI	CGCG	4 cut(s)	141, 263, 292, 302
BstV1I	GCAGC	4 cut(s)	84, 544, 977, 1186
BstV2I	GAAGAC	1 cut(s)	755
BstX2I	RGATCY	1 cut(s)	1354
BstYI	RGATCY	1 cut(s)	1354
Bsu15I	ATCGAT	1 cut(s)	746
BsuI	GTATCC	1 cut(s)	879
BsuRI	GGCC	4 cut(s)	217, 299, 311, 957
BsuTUI	ATCGAT	1 cut(s)	746
BtgI	CCRYGG	1 cut(s)	300
BtgZI	GCGATG	1 cut(s)	1149
BtsCI	GGATG	1 cut(s)	1117
BtsIMutI	CAGTG	1 cut(s)	636
BtuMI	TCGCGA	1 cut(s)	141
Cac8I	GCNNGC	3 cut(s)	297, 330, 1094
CaiI	CAGNNNCTG	1 cut(s)	100
CciI	TCATGA	1 cut(s)	352
CfoI	GCGC	3 cut(s)	263, 292, 826
Cfr13I	GGNCC	7 cut(s)	223, 297, 309, 340, 1037, 1070, 1178
Cfr42I	CCGCGG	1 cut(s)	303
Cfr9I	CCCGGG	1 cut(s)	873
ClaI	ATCGAT	1 cut(s)	746
CsiI	ACCWGGT	1 cut(s)	1257
Csp6I	GTAC	3 cut(s)	496, 612, 1329
CviAII	CATG	6 cut(s)	353, 697, 704, 940, 1093, 1252
CviQI	GTAC	3 cut(s)	496, 612, 1329
DdeI	CTNAG	3 cut(s)	18, 123, 576
DpnI	GATC	5 cut(s)	138, 395, 522, 573, 1356
DpnII	GATC	5 cut(s)	136, 393, 520, 571, 1354
DrdI	GACNNNNNNGTC	1 cut(s)	699
DriI	GACNNNNNGTC	1 cut(s)	229
DseDI	GACNNNNNNGTC	1 cut(s)	699
Eam1105I	GACNNNNNGTC	1 cut(s)	229
EciI	GGCGGA	1 cut(s)	353
Eco130I	CCWWGG	3 cut(s)	969, 1040, 1281
Eco24I	GRGCYC	3 cut(s)	19, 42, 795
Eco47I	GGWCC	5 cut(s)	223, 340, 1037, 1070, 1178
Eco57I	CTGAAG	2 cut(s)	122, 600
Eco88I	CYCGRG	2 cut(s)	35, 873
EcoNI	CCTNNNNNAGG	1 cut(s)	1044
EcoO109I	RGGNCCY	3 cut(s)	223, 309, 1037
EcoRII	CCWGG	3 cut(s)	311, 890, 1257
EcoT14I	CCWWGG	3 cut(s)	969, 1040, 1281
EcoT22I	ATGCAT	1 cut(s)	1098
EcoT38I	GRGCYC	3 cut(s)	19, 42, 795
ErhI	CCWWGG	3 cut(s)	969, 1040, 1281
Esp3I	CGTCTC	1 cut(s)	126
FaeI	CATG	6 cut(s)	356, 700, 707, 943, 1096, 1255
FaqI	GGGAC	1 cut(s)	236
FatI	CATG	6 cut(s)	352, 696, 703, 939, 1092, 1251
FauI	CCCGC	3 cut(s)	288, 791, 851
FbaI	TGATCA	1 cut(s)	520
FblI	GTMKAC	1 cut(s)	633
FokI	GGATG	1 cut(s)	1124
FriOI	GRGCYC	3 cut(s)	19, 42, 795
FspBI	CTAG	2 cut(s)	720, 1041
GlaI	GCGC	3 cut(s)	262, 291, 825
GsuI	CTGGAG	2 cut(s)	305, 1218
HaeII	RGCGCY	1 cut(s)	827
HaeIII	GGCC	4 cut(s)	217, 299, 311, 957
HapII	CCGG	8 cut(s)	12, 23, 344, 486, 687, 874, 1033, 1063
HhaI	GCGC	3 cut(s)	263, 292, 826
Hin1II	CATG	6 cut(s)	356, 700, 707, 943, 1096, 1255
Hin6I	GCGC	3 cut(s)	261, 290, 824
HinP1I	GCGC	3 cut(s)	261, 290, 824
HincII	GTYRAC	1 cut(s)	1014
HindII	GTYRAC	1 cut(s)	1014
HindIII	AAGCTT	1 cut(s)	809
HinfI	GANTC	6 cut(s)	180, 272, 349, 677, 700, 982
HpaII	CCGG	8 cut(s)	12, 23, 344, 486, 687, 874, 1033, 1063
HphI	GGTGA	2 cut(s)	316, 787
Hpy166II	GTNNAC	3 cut(s)	634, 778, 1014
Hpy188I	TCNGA	6 cut(s)	54, 66, 277, 412, 475, 525
Hpy188III	TCNNGA	7 cut(s)	140, 353, 569, 575, 687, 1235, 1264
Hpy8I	GTNNAC	3 cut(s)	634, 778, 1014
Hpy99I	CGWCG	2 cut(s)	70, 235
HpyAV	CCTTC	6 cut(s)	97, 247, 361, 724, 814, 1074
HpyCH4III	ACNGT	1 cut(s)	1278
HpyCH4IV	ACGT	1 cut(s)	1010
HpyCH4V	TGCA	3 cut(s)	1096, 1274, 1311
HpyF3I	CTNAG	3 cut(s)	18, 123, 576
HpySE526I	ACGT	1 cut(s)	1010
Hsp92II	CATG	6 cut(s)	356, 700, 707, 943, 1096, 1255
HspAI	GCGC	3 cut(s)	261, 290, 824
Kpn2I	TCCGGA	1 cut(s)	686
KpnI	GGTACC	1 cut(s)	1332
Ksp22I	TGATCA	1 cut(s)	520
KspI	CCGCGG	1 cut(s)	303
Kzo9I	GATC	5 cut(s)	136, 393, 520, 571, 1354
LmnI	GCTCC	2 cut(s)	654, 920
Lsp1109I	GCAGC	4 cut(s)	84, 544, 977, 1186
LweI	GCATC	3 cut(s)	58, 752, 1105
MabI	ACCWGGT	1 cut(s)	1257
MaeI	CTAG	2 cut(s)	720, 1041
MaeII	ACGT	1 cut(s)	1010
MaeIII	GTNAC	3 cut(s)	935, 1006, 1318
MalI	GATC	5 cut(s)	138, 395, 522, 573, 1356
MboI	GATC	5 cut(s)	136, 393, 520, 571, 1354
MboII	GAAGA	6 cut(s)	173, 176, 739, 755, 1148, 1314
MflI	RGATCY	1 cut(s)	1354
MhlI	GDGCHC	4 cut(s)	19, 42, 198, 795
MluCI	AATT	8 cut(s)	60, 70, 201, 398, 415, 530, 622, 1147
MlyI	GAGTC	2 cut(s)	709, 991
MmeI	TCCRAC	1 cut(s)	89
Mph1103I	ATGCAT	1 cut(s)	1098
MroI	TCCGGA	1 cut(s)	686
MseI	TTAA	4 cut(s)	1217, 1298, 1383, 1420
MslI	CAYNNNNRTG	1 cut(s)	1410
MspA1I	CMGCKG	3 cut(s)	97, 302, 954
MspI	CCGG	8 cut(s)	12, 23, 344, 486, 687, 874, 1033, 1063
MvaI	CCWGG	3 cut(s)	313, 892, 1259
MvnI	CGCG	4 cut(s)	141, 263, 292, 302
NciI	CCSGG	7 cut(s)	13, 24, 344, 486, 874, 875, 1034
NdeII	GATC	5 cut(s)	136, 393, 520, 571, 1354
NlaIII	CATG	6 cut(s)	356, 700, 707, 943, 1096, 1255
NlaIV	GGNNCC	6 cut(s)	224, 320, 342, 482, 1038, 1330
NmeAIII	GCCGAG	1 cut(s)	243
NmuCI	GTSAC	1 cut(s)	935
NruI	TCGCGA	1 cut(s)	141
NsiI	ATGCAT	1 cut(s)	1098
NspI	RCATGY	1 cut(s)	1096
OliI	CACNNNNGTG	1 cut(s)	1410
PaeI	GCATGC	1 cut(s)	1096
PagI	TCATGA	1 cut(s)	352
PfeI	GAWTC	4 cut(s)	180, 272, 349, 677
Ple19I	CGATCG	1 cut(s)	139
PleI	GAGTC	2 cut(s)	708, 990
PpsI	GAGTC	2 cut(s)	708, 990
PpuMI	RGGWCCY	2 cut(s)	223, 1037
PshBI	ATTAAT	1 cut(s)	1383
PsiI	TTATAA	1 cut(s)	771
Psp5II	RGGWCCY	2 cut(s)	223, 1037
Psp6I	CCWGG	3 cut(s)	311, 890, 1257
PspGI	CCWGG	3 cut(s)	311, 890, 1257
PspN4I	GGNNCC	6 cut(s)	224, 320, 342, 482, 1038, 1330
PspPI	GGNCC	7 cut(s)	223, 297, 309, 340, 1037, 1070, 1178
PspPPI	RGGWCCY	2 cut(s)	223, 1037
PstNI	CAGNNNCTG	1 cut(s)	100
PsuI	RGATCY	1 cut(s)	1354
PvuI	CGATCG	1 cut(s)	139
PvuII	CAGCTG	1 cut(s)	97
RruI	TCGCGA	1 cut(s)	141
RsaI	GTAC	3 cut(s)	497, 613, 1330
RsaNI	GTAC	3 cut(s)	496, 612, 1329
RseI	CAYNNNNRTG	1 cut(s)	1410
SacII	CCGCGG	1 cut(s)	303
SaqAI	TTAA	4 cut(s)	1217, 1298, 1383, 1420
Sau3AI	GATC	5 cut(s)	136, 393, 520, 571, 1354
Sau96I	GGNCC	7 cut(s)	223, 297, 309, 340, 1037, 1070, 1178
SchI	GAGTC	2 cut(s)	709, 991
SduI	GDGCHC	4 cut(s)	19, 42, 198, 795
SexAI	ACCWGGT	1 cut(s)	1257
SfaNI	GCATC	3 cut(s)	58, 752, 1105
SfcI	CTRYAG	2 cut(s)	92, 1169
Sfr303I	CCGCGG	1 cut(s)	303
SgrBI	CCGCGG	1 cut(s)	303
SinI	GGWCC	5 cut(s)	223, 340, 1037, 1070, 1178
SmaI	CCCGGG	1 cut(s)	875
SmiMI	CAYNNNNRTG	1 cut(s)	1410
SmlI	CTYRAG	1 cut(s)	812
SmoI	CTYRAG	1 cut(s)	812
SphI	GCATGC	1 cut(s)	1096
Sse9I	AATT	8 cut(s)	60, 70, 201, 398, 415, 530, 622, 1147
SspI	AATATT	1 cut(s)	115
SspMI	CTAG	2 cut(s)	720, 1041
StyI	CCWWGG	3 cut(s)	969, 1040, 1281
TaaI	ACNGT	1 cut(s)	1278
TaiI	ACGT	1 cut(s)	1013
TaqI	TCGA	3 cut(s)	396, 570, 746
TasI	AATT	8 cut(s)	60, 70, 201, 398, 415, 530, 622, 1147
TatI	WGTACW	1 cut(s)	611
TauI	GCSGC	8 cut(s)	91, 266, 295, 302, 328, 743, 858, 957
TfiI	GAWTC	4 cut(s)	180, 272, 349, 677
Tru1I	TTAA	4 cut(s)	1217, 1298, 1383, 1420
Tru9I	TTAA	4 cut(s)	1217, 1298, 1383, 1420
TscAI	CASTG	1 cut(s)	643
TseFI	GTSAC	1 cut(s)	935
TseI	GCWGC	4 cut(s)	97, 557, 965, 1199
Tsp45I	GTSAC	1 cut(s)	935
TspDTI	ATGAA	4 cut(s)	341, 369, 672, 1268
TspGWI	ACGGA	2 cut(s)	73, 676
TspMI	CCCGGG	1 cut(s)	873
TspRI	CASTG	1 cut(s)	643
VpaK11BI	GGWCC	5 cut(s)	223, 340, 1037, 1070, 1178
VspI	ATTAAT	1 cut(s)	1383
XagI	CCTNNNNNAGG	1 cut(s)	1044
XapI	RAATTY	2 cut(s)	415, 1147
XceI	RCATGY	1 cut(s)	1096
XmaI	CCCGGG	1 cut(s)	873
XmaJI	CCTAGG	1 cut(s)	1040
XmiI	GTMKAC	1 cut(s)	633
XspI	CTAG	2 cut(s)	720, 1041
Zsp2I	ATGCAT	1 cut(s)	1098

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.