Prupe.1G529100_v2.0.a1

rho GTPase-activating protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0007329
Physical Location & Seq
Forward (+)
43278748 .. 43291374
12627 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G529100.2

Sequence Viewer

Length: 2742 bp
ATGACTAACCGAATCGCGGAAACGCCTCAGGGAGAAGGCAATGCTCCTCCTCCTCCTCCCCCGCCTGGTGGCCCTGATCGACCTGAATCACAGCCTTCTCGTAGTGGCAATACGATTTTCAAGAGTGGGCCACTATTTATATCATCGAAAGGAATTGGATGGACATCTTGGAAAAAAAGATGGTTTATTTTAACTCGTACTTCGCTGGTTTTTTTCAGAAGTGATCCAAGTGCTGCTCTAAAGGGGAGTGAAGTGAATTTGACCCTGGGTGGTATTGACCTCAACAATTCAGGCAGTGTGGTTGTCAAAGCAGACAAGAAACTCTTGACCGTGCTATTTCCGGATGGCCGTGATGGACGAGCTTTCACACTTAAGGCTGAAACTTTGGAGGATCTACATGAGTGGAAGACTGCACTTGAGAATGCTTTGGCACAAGCCCCAAGTGGTGGAGCTCATGCAATGGGGCAAAATGGTATATTGGGGAATGAGAAGACTGATTCAGTCGTTGGTTCTTTGGACCAGTCAAAGGAGAAAAAGCCTGCAAAATCTACAGTCATTGGGGTGCCTGTTTTGCTGGCCTTGGAAGATGTTGATGGAGCTCCATCTTTCTTGGAAAAAGCCCTTAGGTTCGTAGAAGAATATGGAGTCAAAGTAGAAGGGATCTTACGGCAAGCTGCAGATGTTGATGATGTTGAAAGTCGAGTACGAGAATATGAACAGGGGAAAGTTGAGTTTTCTCCTGAGGAGGATCCACATATTATTGCTGATTGTGTCAAGTATGTCCTTCGGGAGTTGCCATCTTCTCCGGTCCCTGCCTCTTGCTGCAATGCACTACTAGAAGCCTTCCGTAAGTCTGGTAATGATCGCGGTGGTAGAATCAATGCTATGCGTACAACAATATGTGATACATTCCCGGAGCCAAATCGTCGTTTATTGCAAAGAATTCTATTGATGATGCAAACTGTGGCTGCGCACAAAGCTGTGAATCGAATGAGCTGCTCAGCTGTGGCAGCTTGCATGGCACCCTTACTTCTTCGTCCACTTCTAGCTGGAGATTGTGAAGTTGATAATGATTTTGATATGGGGGGTGATGGTTCGGTTCAACTATTGCAAGCCGCTGCTGCAGCTAATCATGCTCAAGCAATCGTTATTACTTTGTTGGAGGAGTATGATAACATATTTGGGGAAGGTGATCTCTCCCCTGAACTATACAGTGACACCGAAGAGAGTGAAAGTGAGACCGAGGGGGCATCTGACGAAGGTGATTACTATGATGATGAAACTGATGCAGAAACAGATGATGATGTTGAAATTGTTTCTGATGGAACATGCAGTGAGAGTGGCGACTCTGGACACAGTGATCTGCATAATGATAAGGATGGTGATGATTTTAGCTCAGGTTCCAAGTCCCTTGATGGAGATGATAATATTAAAGCTCAGAAGTTGTCGTCAAGCTCACTTAAAACTTTGCAGCCTCAACATGATGTGCAAAAGAATGAGAATGAACTGGTTTCAAGTAAAAATAATTCGGCAGAGCTGGCTAATGAGTCTGCTGTAGTAGGAGATGTTTCTAGAGAAACAAGTTCTGTGCAGCAGCCAATTGTTCATGGTCTTCCATCCATCCAAAAATCTTCAACTATATCCAATGGACCTGCACTTGGTACAAGAGGTCGTACTGCTTGGGGACGTACCGCTGCAAAGAAGAACCTTTCAATGGAATCCATCGATTACAGCCTTGAGGAGGAGGATGAAATCCAGATGCTTGAGATTACTAAATCGGAGTTGGAAAACAGAATTGCAGAAGAGGTTCAAGGGAATGCAGCTCTGCAAGCAAGTTTGGAAAGACAGAAGACAGCCTTGCGTGAGCGTCGTCTAGCTCTCGAGCAAGATGTGGCAAGGCTACAGGAAGAGTTACAGAAGGAGAGGGATTTAACAGCAGCTCTTGAAGCAGGACTTCATATTTCTGGAGGATGTGTACCCAATTTATCCACTGTTGATGAAAAAACAAGGGCAGAGCTTCATGAAATAGCTCAGGCAGAGGCAAATGTTGCCAACTTGAAGAAGAAGGTTGATGATCTAGGTGTACAGCTTAACCAACAACGAGAGCGAAACCATGGCTCTATGGCTGATGCATCCACTTTGTCCCAACACAATCGGGATCTTCATGCAAAACCGAACACGATGGATAAAAAACAGGACAGTGAAGCCATAGCCCCTTCACGTGATGAATCATCAAGAAGTAAGGATACTCAAACAGATGGAGCAGAAAAACATAGAAGCAACTATCGGTCGGTTGTGTTGCCAACCGATTCTTGTGCTGTAGAGCCAATGGGGCCTAAGCCTAGTGCTCCAAGCAACTCCAAGAAAAGTGGTACAGGGGGTGAGGGCGGCACAACTTCAGCAATAACAAAGTTGACGTCGCGACTGAATTTTTTGAAGGAGCGGAGAAGCCAAATAGCAAATGAAATTCAAGGCCGAGGTTCAGGTCAACCTGCCCAAAATTTGGATAAAAATCAATCAATCCAATACTCAGACAAGAGCTTGGAAACCACAGAAAAGCCAGAGAAGCTTAGAAAAGGAGAGAGTCATTCGTACGCAGAGAGAGGCAGAAAATCAGAAAGCCAACAGCAGCATGGCCTGGACAGAGGAAAATCAGAAAGCCATCTGTCCGTTAGCGTGGAGAAAGGTCGAATCGTAGAGAGTAAAACTTTCGGTTCTCCAAGGGCGGACTCTAGATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0000904 GO:0001891 GO:0002009 GO:0002011 GO:0003006 GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005938 GO:0006810 GO:0006897 GO:0006909 GO:0006911 GO:0006996 GO:0007010 GO:0007015 GO:0007154 GO:0007155 GO:0008047 GO:0008150 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009865 GO:0009875 GO:0009888 GO:0009932 GO:0009966 GO:0009968 GO:0009987 GO:0010324 GO:0010646 GO:0010648 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0016324 GO:0017016 GO:0017048 GO:0019899 GO:0022414 GO:0022610 GO:0023051 GO:0023057 GO:0030029 GO:0030036 GO:0030133 GO:0030154 GO:0030234 GO:0030695 GO:0031267 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032989 GO:0035023 GO:0035024 GO:0040007 GO:0042995 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043547 GO:0044093 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044703 GO:0044706 GO:0045177 GO:0046578 GO:0046580 GO:0048468 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048588 GO:0048589 GO:0048729 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051056 GO:0051058 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051704 GO:0060429 GO:0060560 GO:0060589 GO:0061024 GO:0065007 GO:0065009 GO:0070382 GO:0071840 GO:0071944 GO:0090406 GO:0090630 GO:0097435 GO:0097708 GO:0098590 GO:0098609 GO:0098657 GO:0098740 GO:0098772 GO:0099024 GO:0099503 GO:0099568 GO:0120025 GO:1902531 GO:1902532
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lzipper-MIP1 PH RhoGAP

Protein Analysis

914

Amino Acids

98.9

Weight (kDa)

5.06

Isoelectric Point (pI)

48.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2420
Acc16I TGCGCA 1 cut(s) 972
Acc36I ACCTGC 2 cut(s) 1660, 2500
AccB1I GGYRCC 2 cut(s) 562, 1021
AccB7I CCANNNNNTGG 2 cut(s) 446, 2503
AccBSI CCGCTC 1 cut(s) 2443
AccII CGCG 3 cut(s) 17, 867, 2422
AccIII TCCGGA 1 cut(s) 340
AciI CCGC 8 cut(s) 17, 62, 867, 1116, 1692, 2388, 2443, 2726
AclWI GGATC 6 cut(s) 218, 399, 668, 743, 756, 2166
AcoI YGGCCR 1 cut(s) 346
AcsI RAATTY 5 cut(s) 256, 942, 2428, 2466, 2500
AcuI CTGAAG 1 cut(s) 2382
AcvI CACGTG 1 cut(s) 2222
AcyI GRCGYC 1 cut(s) 2417
AfiI CCNNNNNNNGG 9 cut(s) 16, 65, 68, 446, 526, 1658, 1714, 1741, 2503
AflII CTTAAG 1 cut(s) 371
AjnI CCWGG 3 cut(s) 64, 264, 2637
Alw21I GWGCWC 3 cut(s) 454, 601, 2350
Alw26I GTCTC 1 cut(s) 1232
AlwI GGATC 6 cut(s) 218, 399, 668, 743, 756, 2166
Ama87I CYCGRG 1 cut(s) 1880
Aor13HI TCCGGA 1 cut(s) 340
AoxI GGCC 7 cut(s) 70, 128, 346, 576, 2333, 2473, 2635
ApoI RAATTY 5 cut(s) 256, 942, 2428, 2466, 2500
ArsI GACNNNNNNTTYG 2 cut(s) 2402, 2434
Asp700I GAANNNNTTC 1 cut(s) 1806
AspLEI GCGC 1 cut(s) 973
AspS9I GGNCC 6 cut(s) 71, 128, 517, 808, 1649, 2333
AsuC2I CCSGG 1 cut(s) 914
AsuHPI GGTGA 5 cut(s) 1100, 1202, 1274, 1394, 2393
AvaI CYCGRG 1 cut(s) 1880
AvaII GGWCC 3 cut(s) 517, 808, 1649
AxyI CCTNAGG 3 cut(s) 27, 623, 741
BamHI GGATCC 1 cut(s) 748
BanI GGYRCC 2 cut(s) 562, 1021
BanII GRGCYC 2 cut(s) 454, 601
BarI GAAGNNNNNNTAC 4 cut(s) 648, 680, 2230, 2262
BbrPI CACGTG 1 cut(s) 2222
BbsI GAAGAC 4 cut(s) 413, 497, 1604, 1856
Bbv12I GWGCWC 3 cut(s) 454, 601, 2350
BceAI ACGGC 2 cut(s) 333, 683
BcgI CGANNNNNNTGC 4 cut(s) 978, 1012, 2297, 2331
BciT130I CCWGG 3 cut(s) 66, 266, 2639
BciVI GTATCC 1 cut(s) 2239
BcnI CCSGG 1 cut(s) 914
BcoDI GTCTC 1 cut(s) 1232
BfaI CTAG 7 cut(s) 836, 1046, 1572, 1874, 2078, 2343, 2733
BfmI CTRYAG 6 cut(s) 549, 675, 1122, 1554, 1901, 2319
BfrI CTTAAG 1 cut(s) 371
BfuAI ACCTGC 2 cut(s) 1660, 2500
BfuI GTATCC 1 cut(s) 2239
BglI GCCNNNNNGGC 1 cut(s) 2332
BlpI GCTNAGC 1 cut(s) 1000
Bme1390I CCNGG 4 cut(s) 66, 266, 914, 2639
Bme18I GGWCC 3 cut(s) 517, 808, 1649
BmeT110I CYCGRG 1 cut(s) 1880
BmgT120I GGNCC 6 cut(s) 71, 128, 517, 808, 1649, 2333
BmiI GGNNCC 7 cut(s) 564, 750, 810, 918, 1023, 1402, 2334
BmrFI CCNGG 4 cut(s) 66, 266, 914, 2639
BmsI GCATC 6 cut(s) 945, 1259, 1276, 1749, 2119, 2141
BpiI GAAGAC 4 cut(s) 413, 497, 1604, 1856
BpmI CTGGAG 2 cut(s) 1071, 1986
Bpu10I CCTNAGC 3 cut(s) 1396, 2031, 2337
Bpu1102I GCTNAGC 1 cut(s) 1000
BpuEI CTTGAG 4 cut(s) 437, 1122, 1757, 1784
BpuMI CCSGG 1 cut(s) 914
Bsa29I ATCGAT 1 cut(s) 1725
BsaAI YACGTR 1 cut(s) 2222
BsaBI GATNNNNATC 2 cut(s) 163, 2511
BsaHI GRCGYC 1 cut(s) 2417
BsaI GGTCTC 1 cut(s) 1232
BsaJI CCNNGG 7 cut(s) 264, 265, 579, 1242, 2113, 2476, 2720
BsaWI WCCGGW 2 cut(s) 340, 805
BsaXI ACNNNNNCTCC 4 cut(s) 636, 666, 1959, 1989
Bsc4I CCNNNNNNNGG 9 cut(s) 16, 65, 68, 446, 526, 1658, 1714, 1741, 2503
Bse1I ACTGG 2 cut(s) 520, 1512
Bse21I CCTNAGG 3 cut(s) 27, 623, 741
Bse3DI GCAATG 3 cut(s) 46, 465, 832
Bse8I GATNNNNATC 2 cut(s) 163, 2511
BseAI TCCGGA 1 cut(s) 340
BseBI CCWGG 3 cut(s) 66, 266, 2639
BseCI ATCGAT 1 cut(s) 1725
BseDI CCNNGG 7 cut(s) 264, 265, 579, 1242, 2113, 2476, 2720
BseGI GGATG 8 cut(s) 164, 349, 1384, 1616, 1620, 1753, 1976, 2132
BseJI GATNNNNATC 2 cut(s) 163, 2511
BseLI CCNNNNNNNGG 9 cut(s) 16, 65, 68, 446, 526, 1658, 1714, 1741, 2503
BseMI GCAATG 3 cut(s) 46, 465, 832
BseMII CTCAG 7 cut(s) 41, 732, 1014, 1410, 1451, 2045, 2544
BseNI ACTGG 2 cut(s) 520, 1512
BseRI GAGGAG 8 cut(s) 36, 39, 42, 45, 758, 1178, 1754, 1757
BsgI GTGCAG 3 cut(s) 396, 1610, 1638
Bsh1236I CGCG 3 cut(s) 17, 867, 2422
Bsh1285I CGRYCG 1 cut(s) 2291
BshFI GGCC 7 cut(s) 72, 130, 348, 578, 2335, 2475, 2637
BshNI GGYRCC 2 cut(s) 562, 1021
BshVI ATCGAT 1 cut(s) 1725
BsiEI CGRYCG 1 cut(s) 2291
BsiHKAI GWGCWC 3 cut(s) 454, 601, 2350
BsiHKCI CYCGRG 1 cut(s) 1880
BsiSI CCGG 3 cut(s) 341, 806, 914
BsiWI CGTACG 1 cut(s) 2592
BslFI GGGAC 4 cut(s) 794, 1393, 1698, 2128
BslI CCNNNNNNNGG 9 cut(s) 16, 65, 68, 446, 526, 1658, 1714, 1741, 2503
BsmAI GTCTC 1 cut(s) 1232
BsmFI GGGAC 4 cut(s) 794, 1393, 1698, 2128
BsmI GAATGC 2 cut(s) 427, 1822
BsnI GGCC 7 cut(s) 72, 130, 348, 578, 2335, 2475, 2637
Bso31I GGTCTC 1 cut(s) 1232
BsoBI CYCGRG 1 cut(s) 1880
Bsp1286I GDGCHC 3 cut(s) 454, 601, 2350
Bsp13I TCCGGA 1 cut(s) 340
Bsp1407I TGTACA 1 cut(s) 2083
Bsp1720I GCTNAGC 1 cut(s) 1000
Bsp19I CCATGG 1 cut(s) 2113
Bsp68I TCGCGA 1 cut(s) 2422
BspACI CCGC 8 cut(s) 17, 62, 867, 1116, 1692, 2388, 2443, 2726
BspANI GGCC 7 cut(s) 72, 130, 348, 578, 2335, 2475, 2637
BspCNI CTCAG 7 cut(s) 40, 733, 1013, 1409, 1450, 2044, 2543
BspDI ATCGAT 1 cut(s) 1725
BspEI TCCGGA 1 cut(s) 340
BspFNI CGCG 3 cut(s) 17, 867, 2422
BspHI TCATGA 1 cut(s) 2020
BspLI GGNNCC 7 cut(s) 564, 750, 810, 918, 1023, 1402, 2334
BspMAI CTGCAG 2 cut(s) 679, 1126
BspMI ACCTGC 2 cut(s) 1660, 2500
BspPI GGATC 6 cut(s) 218, 399, 668, 743, 756, 2166
BspT107I GGYRCC 2 cut(s) 562, 1021
BspTI CTTAAG 1 cut(s) 371
BspTNI GGTCTC 1 cut(s) 1232
BsrBI CCGCTC 1 cut(s) 2443
BsrDI GCAATG 3 cut(s) 46, 465, 832
BsrGI TGTACA 1 cut(s) 2083
BsrI ACTGG 2 cut(s) 520, 1512
BssECI CCNNGG 7 cut(s) 264, 265, 579, 1242, 2113, 2476, 2720
BssNI GRCGYC 1 cut(s) 2417
BssT1I CCWWGG 3 cut(s) 579, 2113, 2720
Bst2UI CCWGG 3 cut(s) 66, 266, 2639
Bst4CI ACNGT 7 cut(s) 331, 553, 964, 1214, 1358, 1993, 2201
Bst6I CTCTTC 3 cut(s) 1218, 1797, 1902
BstACI GRCGYC 1 cut(s) 2417
BstAFI CTTAAG 1 cut(s) 371
BstAPI GCANNNNNTGC 1 cut(s) 2048
BstAUI TGTACA 1 cut(s) 2083
BstBAI YACGTR 1 cut(s) 2222
BstC8I GCNNGC 7 cut(s) 540, 576, 672, 1015, 1113, 1539, 1830
BstDSI CCRYGG 1 cut(s) 2113
BstENI CCTNNNNNAGG 1 cut(s) 1739
BstF5I GGATG 8 cut(s) 164, 349, 1384, 1616, 1620, 1753, 1976, 2132
BstFNI CGCG 3 cut(s) 17, 867, 2422
BstHHI GCGC 1 cut(s) 973
BstMAI GTCTC 1 cut(s) 1232
BstMCI CGRYCG 1 cut(s) 2291
BstNI CCWGG 3 cut(s) 66, 266, 2639
BstNSI RCATGY 1 cut(s) 1332
BstSCI CCNGG 4 cut(s) 64, 264, 912, 2637
BstSFI CTRYAG 6 cut(s) 549, 675, 1122, 1554, 1901, 2319
BstUI CGCG 3 cut(s) 17, 867, 2422
BstV2I GAAGAC 4 cut(s) 413, 497, 1604, 1856
BstX2I RGATCY 4 cut(s) 391, 660, 748, 2158
BstYI RGATCY 4 cut(s) 391, 660, 748, 2158
Bsu15I ATCGAT 1 cut(s) 1725
Bsu36I CCTNAGG 3 cut(s) 27, 623, 741
BsuI GTATCC 1 cut(s) 2239
BsuRI GGCC 7 cut(s) 72, 130, 348, 578, 2335, 2475, 2637
BsuTUI ATCGAT 1 cut(s) 1725
BtgI CCRYGG 1 cut(s) 2113
BtsCI GGATG 8 cut(s) 164, 349, 1384, 1616, 1620, 1753, 1976, 2132
BtsI GCAGTG 2 cut(s) 301, 1339
BtsIMutI CAGTG 6 cut(s) 301, 1219, 1339, 1363, 1989, 2206
BtuMI TCGCGA 1 cut(s) 2422
BveI ACCTGC 2 cut(s) 1660, 2500
Cac8I GCNNGC 7 cut(s) 540, 576, 672, 1015, 1113, 1539, 1830
CciI TCATGA 1 cut(s) 2020
CfoI GCGC 1 cut(s) 973
Cfr13I GGNCC 6 cut(s) 71, 128, 517, 808, 1649, 2333
ClaI ATCGAT 1 cut(s) 1725
CseI GACGC 1 cut(s) 1856
CspCI CAANNNNNGTGG 2 cut(s) 2350, 2385
EaeI YGGCCR 1 cut(s) 346
Eam1104I CTCTTC 3 cut(s) 1218, 1797, 1902
EarI CTCTTC 3 cut(s) 1218, 1797, 1902
EciI GGCGGA 1 cut(s) 2741
Ecl136II GAGCTC 2 cut(s) 452, 599
Eco130I CCWWGG 3 cut(s) 579, 2113, 2720
Eco24I GRGCYC 2 cut(s) 454, 601
Eco31I GGTCTC 1 cut(s) 1232
Eco47I GGWCC 3 cut(s) 517, 808, 1649
Eco53kI GAGCTC 2 cut(s) 452, 599
Eco57I CTGAAG 1 cut(s) 2382
Eco72I CACGTG 1 cut(s) 2222
Eco81I CCTNAGG 3 cut(s) 27, 623, 741
Eco88I CYCGRG 1 cut(s) 1880
EcoICRI GAGCTC 2 cut(s) 452, 599
EcoNI CCTNNNNNAGG 1 cut(s) 1739
EcoO109I RGGNCCY 1 cut(s) 2333
EcoRI GAATTC 1 cut(s) 942
EcoRII CCWGG 3 cut(s) 64, 264, 2637
EcoT14I CCWWGG 3 cut(s) 579, 2113, 2720
EcoT22I ATGCAT 1 cut(s) 2134
EcoT38I GRGCYC 2 cut(s) 454, 601
ErhI CCWWGG 3 cut(s) 579, 2113, 2720
FalI AAGNNNNNCTT 6 cut(s) 308, 340, 1841, 1873, 1938, 1970
FaqI GGGAC 4 cut(s) 794, 1393, 1698, 2128
FauI CCCGC 1 cut(s) 69
FokI GGATG 8 cut(s) 171, 356, 1391, 1603, 1607, 1760, 1983, 2119
FriOI GRGCYC 2 cut(s) 454, 601
FspBI CTAG 7 cut(s) 836, 1046, 1572, 1874, 2078, 2343, 2733
FspI TGCGCA 1 cut(s) 972
GlaI GCGC 1 cut(s) 972
GsuI CTGGAG 2 cut(s) 1071, 1986
HaeIII GGCC 7 cut(s) 72, 130, 348, 578, 2335, 2475, 2637
HapII CCGG 3 cut(s) 341, 806, 914
HgaI GACGC 1 cut(s) 1856
HhaI GCGC 1 cut(s) 973
Hin1I GRCGYC 1 cut(s) 2417
Hin6I GCGC 1 cut(s) 971
HinP1I GCGC 1 cut(s) 971
HincII GTYRAC 2 cut(s) 2415, 2489
HindII GTYRAC 2 cut(s) 2415, 2489
HindIII AAGCTT 1 cut(s) 2567
HpaII CCGG 3 cut(s) 341, 806, 914
HphI GGTGA 5 cut(s) 1100, 1202, 1274, 1394, 2393
Hpy166II GTNNAC 5 cut(s) 1040, 1976, 2084, 2415, 2489
Hpy188I TCNGA 8 cut(s) 218, 1255, 1321, 1440, 1780, 2533, 2617, 2656
Hpy8I GTNNAC 5 cut(s) 1040, 1976, 2084, 2415, 2489
Hpy99I CGWCG 3 cut(s) 930, 1872, 2422
HpyCH4III ACNGT 7 cut(s) 331, 553, 964, 1214, 1358, 1993, 2201
HpyCH4IV ACGT 3 cut(s) 1687, 2221, 2417
HpySE526I ACGT 3 cut(s) 1687, 2221, 2417
Hsp92I GRCGYC 1 cut(s) 2417
HspAI GCGC 1 cut(s) 971
Kpn2I TCCGGA 1 cut(s) 340
LmnI GCTCC 8 cut(s) 49, 449, 596, 604, 916, 2261, 2353, 2440
LweI GCATC 6 cut(s) 945, 1259, 1276, 1749, 2119, 2141
MaeI CTAG 7 cut(s) 836, 1046, 1572, 1874, 2078, 2343, 2733
MaeII ACGT 3 cut(s) 1687, 2221, 2417
MaeIII GTNAC 2 cut(s) 1214, 1911
MbiI CCGCTC 1 cut(s) 2443
MfeI CAATTG 1 cut(s) 1599
MflI RGATCY 4 cut(s) 391, 660, 748, 2158
MhlI GDGCHC 3 cut(s) 454, 601, 2350
MlyI GAGTC 5 cut(s) 654, 1340, 1556, 2593, 2723
MmeI TCCRAC 2 cut(s) 1140, 1764
Mph1103I ATGCAT 1 cut(s) 2134
MroI TCCGGA 1 cut(s) 340
MroXI GAANNNNTTC 1 cut(s) 1806
MseI TTAA 6 cut(s) 191, 372, 1431, 1461, 1931, 2091
MslI CAYNNNNRTG 1 cut(s) 560
MspA1I CMGCKG 3 cut(s) 1004, 1118, 1694
MspCI CTTAAG 1 cut(s) 371
MspI CCGG 3 cut(s) 341, 806, 914
MspR9I CCNGG 4 cut(s) 66, 266, 914, 2639
MunI CAATTG 1 cut(s) 1599
Mva1269I GAATGC 2 cut(s) 427, 1822
MvaI CCWGG 3 cut(s) 66, 266, 2639
MvnI CGCG 3 cut(s) 17, 867, 2422
NciI CCSGG 1 cut(s) 914
NcoI CCATGG 1 cut(s) 2113
NlaIV GGNNCC 7 cut(s) 564, 750, 810, 918, 1023, 1402, 2334
NmeAIII GCCGAG 1 cut(s) 2501
NmuCI GTSAC 1 cut(s) 1214
NruI TCGCGA 1 cut(s) 2422
NsbI TGCGCA 1 cut(s) 972
NsiI ATGCAT 1 cut(s) 2134
NspI RCATGY 1 cut(s) 1332
PaeR7I CTCGAG 1 cut(s) 1880
PagI TCATGA 1 cut(s) 2020
PasI CCCWGGG 1 cut(s) 265
PctI GAATGC 2 cut(s) 427, 1822
PdmI GAANNNNTTC 1 cut(s) 1806
PfeI GAWTC 9 cut(s) 12, 86, 497, 876, 985, 1718, 2228, 2309, 2691
Pfl23II CGTACG 1 cut(s) 2592
PflMI CCANNNNNTGG 2 cut(s) 446, 2503
PfoI TCCNGGA 1 cut(s) 912
PleI GAGTC 5 cut(s) 653, 1340, 1555, 2592, 2723
PmaCI CACGTG 1 cut(s) 2222
PmlI CACGTG 1 cut(s) 2222
PpsI GAGTC 5 cut(s) 653, 1340, 1555, 2592, 2723
Ppu21I YACGTR 1 cut(s) 2222
Psp124BI GAGCTC 2 cut(s) 454, 601
Psp6I CCWGG 3 cut(s) 64, 264, 2637
PspCI CACGTG 1 cut(s) 2222
PspGI CCWGG 3 cut(s) 64, 264, 2637
PspLI CGTACG 1 cut(s) 2592
PspN4I GGNNCC 7 cut(s) 564, 750, 810, 918, 1023, 1402, 2334
PspPI GGNCC 6 cut(s) 71, 128, 517, 808, 1649, 2333
PstI CTGCAG 2 cut(s) 679, 1126
PsuI RGATCY 4 cut(s) 391, 660, 748, 2158
PvuII CAGCTG 1 cut(s) 1004
RruI TCGCGA 1 cut(s) 2422
RseI CAYNNNNRTG 1 cut(s) 560
SacI GAGCTC 2 cut(s) 454, 601
SaqAI TTAA 6 cut(s) 191, 372, 1431, 1461, 1931, 2091
Sau96I GGNCC 6 cut(s) 71, 128, 517, 808, 1649, 2333
SchI GAGTC 5 cut(s) 654, 1340, 1556, 2593, 2723
ScrFI CCNGG 4 cut(s) 66, 266, 914, 2639
SduI GDGCHC 3 cut(s) 454, 601, 2350
SfaNI GCATC 6 cut(s) 945, 1259, 1276, 1749, 2119, 2141
SfcI CTRYAG 6 cut(s) 549, 675, 1122, 1554, 1901, 2319
Sfr274I CTCGAG 1 cut(s) 1880
SinI GGWCC 3 cut(s) 517, 808, 1649
SlaI CTCGAG 1 cut(s) 1880
SmiMI CAYNNNNRTG 1 cut(s) 560
SmlI CTYRAG 6 cut(s) 371, 416, 1137, 1736, 1763, 1880
SmoI CTYRAG 6 cut(s) 371, 416, 1137, 1736, 1763, 1880
SsiI CCGC 8 cut(s) 17, 62, 867, 1116, 1692, 2388, 2443, 2726
SspI AATATT 1 cut(s) 1429
SspMI CTAG 7 cut(s) 836, 1046, 1572, 1874, 2078, 2343, 2733
SstI GAGCTC 2 cut(s) 454, 601
StyD4I CCNGG 4 cut(s) 64, 264, 912, 2637
StyI CCWWGG 3 cut(s) 579, 2113, 2720
TaaI ACNGT 7 cut(s) 331, 553, 964, 1214, 1358, 1993, 2201
TaiI ACGT 3 cut(s) 1690, 2224, 2420
TaqI TCGA 7 cut(s) 79, 146, 700, 988, 1725, 1881, 2689
TaqII GACCGA 2 cut(s) 1256, 2277
TatI WGTACW 1 cut(s) 2083
TauI GCSGC 2 cut(s) 1118, 2391
TfiI GAWTC 9 cut(s) 12, 86, 497, 876, 985, 1718, 2228, 2309, 2691
Tru1I TTAA 6 cut(s) 191, 372, 1431, 1461, 1931, 2091
Tru9I TTAA 6 cut(s) 191, 372, 1431, 1461, 1931, 2091
TscAI CASTG 6 cut(s) 301, 1219, 1339, 1363, 1996, 2206
TseFI GTSAC 1 cut(s) 1214
Tsp45I GTSAC 1 cut(s) 1214
TspGWI ACGGA 2 cut(s) 836, 2659
TspRI CASTG 6 cut(s) 301, 1219, 1339, 1363, 1996, 2206
Van91I CCANNNNNTGG 2 cut(s) 446, 2503
Vha464I CTTAAG 1 cut(s) 371
VpaK11BI GGWCC 3 cut(s) 517, 808, 1649
XagI CCTNNNNNAGG 1 cut(s) 1739
XapI RAATTY 5 cut(s) 256, 942, 2428, 2466, 2500
XbaI TCTAGA 2 cut(s) 1571, 2732
XceI RCATGY 1 cut(s) 1332
XcmI CCANNNNNNNNNTGG 1 cut(s) 2630
XhoI CTCGAG 1 cut(s) 1880
XmnI GAANNNNTTC 1 cut(s) 1806
XspI CTAG 7 cut(s) 836, 1046, 1572, 1874, 2078, 2343, 2733
ZraI GACGTC 1 cut(s) 2418
Zsp2I ATGCAT 1 cut(s) 2134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.