pycom08g16790

rho GTPase-activating protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0007329
Physical Location & Seq
Forward (+)
16873371 .. 16882612
9242 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g16790.18

Sequence Viewer

Length: 2793 bp
ATGACTAACCGAATCACCAATGCGCCTCAGGGAGAAGGCGATGCTCCTCCTCCTCCTCCTCCTCCCCCATCTGGTAGCCCTGGCCCACCTGAATCTCAGCCTTCTCGTGGTGGCAACACGATATTCAAGAGTGGACCGTTATTTATATCATCCAAAGGAATTGGGTGGACGTCCTGGAAGAAAAGATGGTTTATCCTAACTCGCACATCACTCGTTTTCTTCAGAAGTGATCCAAGTGCTGTTCTAAAGGGGAGTGAAGTGAACTTGACCCTGGGTGGTATTGACCTCAACAATTCAGGCAGTGTGGTTGTCAAAGCAGACAAGAAACTCTTGACCGTGCTCTTTCCAGATGGCCGTGATGGACGAGCCTTCACACTTAAGGCTGAAACATTGGAAGATTTACATGAGTGGAAGACTGCACTTGAAAATGCGTTGGTGCAAGCCCCAAGTGGCGGCGGTCATGCTATGGGGCAAAATGGAACGTTAGGGAATGATAAGACTGAGGCTGTTGATGGTTCTGCGGACCAGTCAAAGGATAAGAAGCCAGTGAAATCTACAGTCGTTGGAGTGCCTGTTCTACTGGCCTTGGAAGATGTTGATGGAGCTCCGTCTTTCTTGGAAAAAGCCTTTAGGTTCGTAGAAGAATATGGAGTCAAAGTAGAAGGGATCTTACGACAAGCTGCAGATGTTGAAGATGTTCAAAGTAGAATAAGAGAGTATGAACAGGGGAAAACTGAGTTTTCTCCTCAGGAGGACGCACATGTTATTGCTGATTGTGTCAAGTATGTCCTCCGGGAGTTGCCATCTCCCCCTGTCCCTGCATCTTGCTGTAATGCACTGTTAGAAGCCTTTCGTAAATCTGGTATAGGTAATGATTGTGGTGGTCGAGTCAATGCTATGCGCACAACAATATGTGATACATTCCCAGAGCCAAATCGCCGTTTACTGCAAAGAATTCTTTTGATGATGCAAAGTGTGGCTGCTCAGAAAGCTGTGAACCGAATGAGCTGCTCTGCTGTGGCAGCTTGTATGGCTCCTTTACTTCTTCGTCCACTCTTAGCTGGGGATTGTGAAGTTGACAATGATTTTGATGTGGGGGGTGATGGTTCTGTTCAACTATTGCAAGCTGCTGCTGCCGCTAATCATGCTCAAGCGATTGTTATAACTTTGTTGGAGGAGTATAATCACATATTTGGGGAAGGTGGTCCCCTGTCCCCGGAACTATACAGTGACACAGAAGATAGTGAAAGTGAGACTGAGGGGGCAACTGATGATGATGATTACTATGAAGATGATGAAACTGATGCAGGAACAGAGGATGAAGAAGCTGAACTTGTTTCTGATGGAGATGGAACATTTAGTGAGAGTGGTGAATCTGAATACAATGATCTGCATGATAATAAGGATGGTGACGGTTTAAGACCAGGCATGAAGTCTCCTCATGGAGGCAACGATGGTAAAGCTCACGAGAAGTTGTCATCAAGCTCAACTAAAATATTGCAGCCTCAACCTGCTTTAGAGAGCAGTGAGAATAAACTGAGTTCAAGCAAAACTAATACGCCAGTGCAGGCTAGCGAGTCTGCTGTAGTAGAAGAGGTTTCTAGAGAAATAAGGTCACGGCAACAGCCACCCGATCATGTTCTTCCATCCCTATCTATTCAAAAATCTTCATCTATATCCAATGGATCTGGGCATGTTAGGAATCGTACTGGTTGGGGACGTATGGCTGCAAGGAAGAACCTTTCCATGGAATCCATTGATTACAGCCTTGAGGAAGAGGCTGAAATCCAGAATCTCGAGAGGACTAAATCTGAGTTAGAAAACAGAATTGCAGAAGAGGTTGAAGGGAATGCTGCTCTACAAGCAAGTCTGGAGAGAGAGAAGACGGCCTTGCGTGAGCGTCGCCTAGCTCTCAAGCAAGATGTGGCGAGACTACAGGAACAGTTACAGAAGGAGAAGGATTTAACAGCAGCTCTCGAAGCAGGACTAAAAATGTCGGGGGGATGTGTGCCCAATTTAGCCACAGTTGATGAAAAAACAAGGGCAGATCTTATTGAAATAGCTCAGGCAGAAGAGAATGTTTCCAACTTGAAGAAGAAGGTTGATGATCTAGGCGTGCAGCTTAATCAACAACGTGAAAGAAACCGTGGCTCTATGTCTGATGCTTCCATTCCATCCCGAAATAGTGGTGATCATCAAGCAAAACAGCACACAACAGATAGACAGAAGGACAGTGAAAACATAGTCCCTTCCCATTTCGAATCGTCAAGAAGCAAGGATACTCATCAAGATGGAACGGAAAATGTGAATGGAAAGAAAACAGATGCAGCAAACAAAAGCAACTCTCGGTCTGTTGCGCCGCCAGCTGATTCTTCTGCAATAGAGACAGTGGTAGCCAAGCCTACAGCTTCAACCAACTCCAAGAAAGGCGGTGGGGTTGAGGGAGGTAATTCCGCAACTTCAGCAATAACAAAGTTGACATCACGATTGAATTTATTGAAGGAGCGGCGGAGCCAAATAGCAAATGAGATTCAAGGCCGCGGTCCTGCTCAAAGTTTGGATAAAAGTCAGTCGCTCCAATACGACAAGAGTTATGAAACCTCGGAAAAGCCAGAGAAACTTAGGAAGGCGGAGAGTCATTCGGAGAGAGGAGGAAAGAGATCAGAAAGCCAACAGCAGCAGCATAACCTGGACAGAGGAAAATCAGAAAGCCATTTATCTGCATCCGTGGAGAAGGGTCGACTTGTAGAGGGTAGTAAATGGAAAACTTCTCCGAGGACGGACAGCAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0000904 GO:0001891 GO:0002009 GO:0002011 GO:0003006 GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005938 GO:0006810 GO:0006897 GO:0006909 GO:0006911 GO:0006996 GO:0007010 GO:0007015 GO:0007154 GO:0007155 GO:0008047 GO:0008150 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009865 GO:0009875 GO:0009888 GO:0009932 GO:0009966 GO:0009968 GO:0009987 GO:0010324 GO:0010646 GO:0010648 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0016324 GO:0017016 GO:0017048 GO:0019899 GO:0022414 GO:0022610 GO:0023051 GO:0023057 GO:0030029 GO:0030036 GO:0030133 GO:0030154 GO:0030234 GO:0030695 GO:0031267 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032989 GO:0035023 GO:0035024 GO:0040007 GO:0042995 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043547 GO:0044093 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044703 GO:0044706 GO:0045177 GO:0046578 GO:0046580 GO:0048468 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048588 GO:0048589 GO:0048729 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051056 GO:0051058 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051704 GO:0060429 GO:0060560 GO:0060589 GO:0061024 GO:0065007 GO:0065009 GO:0070382 GO:0071840 GO:0071944 GO:0090406 GO:0090630 GO:0097435 GO:0097708 GO:0098590 GO:0098609 GO:0098657 GO:0098740 GO:0098772 GO:0099024 GO:0099503 GO:0099568 GO:0120025 GO:1902531 GO:1902532
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lzipper-MIP1 PH RhoGAP

Protein Analysis

931

Amino Acids

100.62

Weight (kDa)

5.23

Isoelectric Point (pI)

56.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1163
AatII GACGTC 1 cut(s) 173
Acc16I TGCGCA 1 cut(s) 902
Acc36I ACCTGC 1 cut(s) 1519
AccBSI CCGCTC 1 cut(s) 2506
AccI GTMKAC 1 cut(s) 2740
AccII CGCG 1 cut(s) 2541
AclI AACGTT 1 cut(s) 482
AclWI GGATC 3 cut(s) 224, 674, 1693
AcoI YGGCCR 1 cut(s) 352
AcsI RAATTY 2 cut(s) 954, 2491
AcuI CTGAAG 2 cut(s) 205, 2445
AcyI GRCGYC 1 cut(s) 170
AfaI GTAC 1 cut(s) 1708
AfiI CCNNNNNNNGG 7 cut(s) 71, 107, 452, 532, 1216, 1445, 1747
AflII CTTAAG 1 cut(s) 377
AflIII ACRYGT 1 cut(s) 760
AjnI CCWGG 5 cut(s) 79, 173, 270, 1423, 2688
AloI GAACNNNNNNTCC 2 cut(s) 558, 590
Alw21I GWGCWC 2 cut(s) 342, 607
Alw26I GTCTC 4 cut(s) 1247, 1440, 1924, 2378
AlwI GGATC 3 cut(s) 224, 674, 1693
Ama87I CYCGRG 1 cut(s) 1796
AoxI GGCC 5 cut(s) 82, 352, 582, 1887, 2536
ApoI RAATTY 2 cut(s) 954, 2491
ArsI GACNNNNNNTTYG 2 cut(s) 1070, 1102
Asp700I GAANNNNTTC 2 cut(s) 696, 849
AspLEI GCGC 3 cut(s) 25, 903, 2359
AspS9I GGNCC 5 cut(s) 83, 134, 523, 1205, 2543
AsuC2I CCSGG 2 cut(s) 794, 1217
AsuHPI GGTGA 5 cut(s) 7, 1112, 1382, 1421, 2201
AsuII TTCGAA 1 cut(s) 2259
AsuNHI GCTAGC 1 cut(s) 1571
AvaI CYCGRG 1 cut(s) 1796
AvaII GGWCC 4 cut(s) 134, 523, 1205, 2543
AxyI CCTNAGG 2 cut(s) 27, 747
BaeGI GKGCMC 1 cut(s) 2013
BanII GRGCYC 1 cut(s) 607
BarI GAAGNNNNNNTAC 4 cut(s) 654, 686, 2263, 2295
BauI CACGAG 2 cut(s) 105, 1466
BbsI GAAGAC 2 cut(s) 419, 1889
Bbv12I GWGCWC 2 cut(s) 342, 607
BceAI ACGGC 4 cut(s) 339, 924, 1634, 1902
BcgI CGANNNNNNTGC 4 cut(s) 193, 227, 990, 1024
BciT130I CCWGG 5 cut(s) 81, 175, 272, 1425, 2690
BciVI GTATCC 1 cut(s) 2272
BclI TGATCA 1 cut(s) 2191
BcnI CCSGG 2 cut(s) 794, 1217
BcoDI GTCTC 4 cut(s) 1247, 1440, 1924, 2378
BfaI CTAG 4 cut(s) 1572, 1602, 1907, 2111
BfmI CTRYAG 5 cut(s) 555, 681, 1584, 1934, 2403
BfrI CTTAAG 1 cut(s) 377
BfuAI ACCTGC 1 cut(s) 1519
BfuI GTATCC 1 cut(s) 2272
BglII AGATCT 1 cut(s) 2047
Bme1390I CCNGG 7 cut(s) 81, 175, 272, 794, 1217, 1425, 2690
Bme18I GGWCC 4 cut(s) 134, 523, 1205, 2543
BmeT110I CYCGRG 1 cut(s) 1796
BmgT120I GGNCC 5 cut(s) 83, 134, 523, 1205, 2543
BmiI GGNNCC 3 cut(s) 1035, 1207, 2513
BmrFI CCNGG 7 cut(s) 81, 175, 272, 794, 1217, 1425, 2690
BmsI GCATC 7 cut(s) 31, 830, 957, 1294, 2152, 2314, 2732
BmtI GCTAGC 1 cut(s) 1575
BpiI GAAGAC 2 cut(s) 419, 1889
BpmI CTGGAG 1 cut(s) 1892
Bpu10I CCTNAGC 1 cut(s) 2064
Bpu14I TTCGAA 1 cut(s) 2259
BpuEI CTTGAG 3 cut(s) 1134, 1790, 1898
BpuMI CCSGG 2 cut(s) 794, 1217
BsaBI GATNNNNATC 1 cut(s) 2283
BsaHI GRCGYC 1 cut(s) 170
BsaXI ACNNNNNCTCC 4 cut(s) 558, 588, 642, 672
Bsc4I CCNNNNNNNGG 7 cut(s) 71, 107, 452, 532, 1216, 1445, 1747
Bse1I ACTGG 5 cut(s) 526, 545, 585, 1562, 1714
Bse21I CCTNAGG 2 cut(s) 27, 747
Bse8I GATNNNNATC 1 cut(s) 2283
BseBI CCWGG 5 cut(s) 81, 175, 272, 1425, 2690
BseGI GGATG 7 cut(s) 149, 1324, 1411, 1646, 2009, 2174, 2723
BseJI GATNNNNATC 1 cut(s) 2283
BseLI CCNNNNNNNGG 7 cut(s) 71, 107, 452, 532, 1216, 1445, 1747
BseNI ACTGG 5 cut(s) 526, 545, 585, 1562, 1714
BseSI GKGCMC 1 cut(s) 2013
BseYI CCCAGC 1 cut(s) 1061
BsgI GTGCAG 3 cut(s) 402, 1586, 2138
Bsh1236I CGCG 1 cut(s) 2541
BshFI GGCC 5 cut(s) 84, 354, 584, 1889, 2538
BsiHKAI GWGCWC 2 cut(s) 342, 607
BsiHKCI CYCGRG 1 cut(s) 1796
BsiSI CCGG 2 cut(s) 793, 1217
BslFI GGGAC 5 cut(s) 800, 1191, 1198, 1731, 2231
BslI CCNNNNNNNGG 7 cut(s) 71, 107, 452, 532, 1216, 1445, 1747
BsmAI GTCTC 4 cut(s) 1247, 1440, 1924, 2378
BsmFI GGGAC 5 cut(s) 800, 1191, 1198, 1731, 2231
BsmI GAATGC 1 cut(s) 1855
BsnI GGCC 5 cut(s) 84, 354, 584, 1889, 2538
BsoBI CYCGRG 1 cut(s) 1796
Bsp119I TTCGAA 1 cut(s) 2259
Bsp1286I GDGCHC 3 cut(s) 342, 607, 2013
Bsp143I GATC 9 cut(s) 229, 666, 1387, 1633, 1685, 2047, 2107, 2191, 2660
Bsp19I CCATGG 1 cut(s) 1746
BspANI GGCC 5 cut(s) 84, 354, 584, 1889, 2538
BspFNI CGCG 1 cut(s) 2541
BspLI GGNNCC 3 cut(s) 1035, 1207, 2513
BspMAI CTGCAG 1 cut(s) 685
BspMI ACCTGC 1 cut(s) 1519
BspOI GCTAGC 1 cut(s) 1575
BspPI GGATC 3 cut(s) 224, 674, 1693
BspT104I TTCGAA 1 cut(s) 2259
BspTI CTTAAG 1 cut(s) 377
BsrBI CCGCTC 1 cut(s) 2506
BsrI ACTGG 5 cut(s) 526, 545, 585, 1562, 1714
BssMI GATC 9 cut(s) 229, 666, 1387, 1633, 1685, 2047, 2107, 2191, 2660
BssNI GRCGYC 1 cut(s) 170
BssSI CACGAG 2 cut(s) 105, 1466
BssT1I CCWWGG 2 cut(s) 585, 1746
Bst2BI CACGAG 2 cut(s) 105, 1466
Bst2UI CCWGG 5 cut(s) 81, 175, 272, 1425, 2690
Bst6I CTCTTC 4 cut(s) 1587, 1770, 1830, 2067
BstACI GRCGYC 1 cut(s) 170
BstAFI CTTAAG 1 cut(s) 377
BstBI TTCGAA 1 cut(s) 2259
BstC8I GCNNGC 6 cut(s) 441, 1125, 1569, 1573, 2117, 2364
BstDSI CCRYGG 4 cut(s) 1746, 2146, 2539, 2727
BstENI CCTNNNNNAGG 1 cut(s) 1443
BstF5I GGATG 7 cut(s) 149, 1324, 1411, 1646, 2009, 2174, 2723
BstFNI CGCG 1 cut(s) 2541
BstHHI GCGC 3 cut(s) 25, 903, 2359
BstKTI GATC 9 cut(s) 232, 669, 1390, 1636, 1688, 2050, 2110, 2194, 2663
BstMAI GTCTC 4 cut(s) 1247, 1440, 1924, 2378
BstMBI GATC 9 cut(s) 229, 666, 1387, 1633, 1685, 2047, 2107, 2191, 2660
BstNI CCWGG 5 cut(s) 81, 175, 272, 1425, 2690
BstNSI RCATGY 2 cut(s) 764, 1697
BstSCI CCNGG 7 cut(s) 79, 173, 270, 792, 1215, 1423, 2688
BstSFI CTRYAG 5 cut(s) 555, 681, 1584, 1934, 2403
BstSLI GKGCMC 1 cut(s) 2013
BstUI CGCG 1 cut(s) 2541
BstV2I GAAGAC 2 cut(s) 419, 1889
BstX2I RGATCY 3 cut(s) 666, 1685, 2047
BstYI RGATCY 3 cut(s) 666, 1685, 2047
Bsu36I CCTNAGG 2 cut(s) 27, 747
BsuI GTATCC 1 cut(s) 2272
BsuRI GGCC 5 cut(s) 84, 354, 584, 1889, 2538
BtgI CCRYGG 4 cut(s) 1746, 2146, 2539, 2727
BtgZI GCGATG 1 cut(s) 54
BtsCI GGATG 7 cut(s) 149, 1324, 1411, 1646, 2009, 2174, 2723
BtsI GCAGTG 2 cut(s) 307, 1531
BtsIMutI CAGTG 8 cut(s) 307, 552, 836, 1234, 1531, 1569, 2239, 2394
BveI ACCTGC 1 cut(s) 1519
Cac8I GCNNGC 6 cut(s) 441, 1125, 1569, 1573, 2117, 2364
CfoI GCGC 3 cut(s) 25, 903, 2359
Cfr13I GGNCC 5 cut(s) 83, 134, 523, 1205, 2543
Cfr42I CCGCGG 1 cut(s) 2542
CseI GACGC 2 cut(s) 764, 1889
Csp6I GTAC 1 cut(s) 1707
CviQI GTAC 1 cut(s) 1707
DpnI GATC 9 cut(s) 231, 668, 1389, 1635, 1687, 2049, 2109, 2193, 2662
DpnII GATC 9 cut(s) 229, 666, 1387, 1633, 1685, 2047, 2107, 2191, 2660
EaeI YGGCCR 1 cut(s) 352
Eam1104I CTCTTC 4 cut(s) 1587, 1770, 1830, 2067
EarI CTCTTC 4 cut(s) 1587, 1770, 1830, 2067
EciI GGCGGA 2 cut(s) 2524, 2645
Ecl136II GAGCTC 1 cut(s) 605
Eco130I CCWWGG 2 cut(s) 585, 1746
Eco24I GRGCYC 1 cut(s) 607
Eco47I GGWCC 4 cut(s) 134, 523, 1205, 2543
Eco53kI GAGCTC 1 cut(s) 605
Eco57I CTGAAG 2 cut(s) 205, 2445
Eco81I CCTNAGG 2 cut(s) 27, 747
Eco88I CYCGRG 1 cut(s) 1796
EcoICRI GAGCTC 1 cut(s) 605
EcoNI CCTNNNNNAGG 1 cut(s) 1443
EcoRI GAATTC 1 cut(s) 954
EcoRII CCWGG 5 cut(s) 79, 173, 270, 1423, 2688
EcoT14I CCWWGG 2 cut(s) 585, 1746
EcoT38I GRGCYC 1 cut(s) 607
ErhI CCWWGG 2 cut(s) 585, 1746
FalI AAGNNNNNCTT 6 cut(s) 314, 346, 1317, 1349, 1874, 1906
FaqI GGGAC 5 cut(s) 800, 1191, 1198, 1731, 2231
FbaI TGATCA 1 cut(s) 2191
FblI GTMKAC 1 cut(s) 2740
FokI GGATG 7 cut(s) 136, 1331, 1418, 1633, 2016, 2161, 2710
FriOI GRGCYC 1 cut(s) 607
FspAI RTGCGCAY 1 cut(s) 902
FspBI CTAG 4 cut(s) 1572, 1602, 1907, 2111
FspI TGCGCA 1 cut(s) 902
GlaI GCGC 3 cut(s) 24, 902, 2358
GsaI CCCAGC 1 cut(s) 1065
GsuI CTGGAG 1 cut(s) 1892
HaeIII GGCC 5 cut(s) 84, 354, 584, 1889, 2538
HapII CCGG 2 cut(s) 793, 1217
HgaI GACGC 2 cut(s) 764, 1889
HhaI GCGC 3 cut(s) 25, 903, 2359
Hin1I GRCGYC 1 cut(s) 170
Hin6I GCGC 3 cut(s) 23, 901, 2357
HinP1I GCGC 3 cut(s) 23, 901, 2357
HincII GTYRAC 3 cut(s) 1078, 2478, 2741
HindII GTYRAC 3 cut(s) 1078, 2478, 2741
HpaII CCGG 2 cut(s) 793, 1217
HphI GGTGA 5 cut(s) 7, 1112, 1382, 1421, 2201
Hpy166II GTNNAC 9 cut(s) 134, 168, 262, 944, 997, 1052, 1078, 2478, 2741
Hpy8I GTNNAC 9 cut(s) 134, 168, 262, 944, 997, 1052, 1078, 2478, 2741
Hpy99I CGWCG 1 cut(s) 1905
HpyCH4IV ACGT 4 cut(s) 170, 482, 1720, 2134
HpySE526I ACGT 4 cut(s) 170, 482, 1720, 2134
Hsp92I GRCGYC 1 cut(s) 170
HspAI GCGC 3 cut(s) 23, 901, 2357
Ksp22I TGATCA 1 cut(s) 2191
KspI CCGCGG 1 cut(s) 2542
Kzo9I GATC 9 cut(s) 229, 666, 1387, 1633, 1685, 2047, 2107, 2191, 2660
LmnI GCTCC 7 cut(s) 49, 602, 610, 1039, 2503, 2511, 2580
LweI GCATC 7 cut(s) 31, 830, 957, 1294, 2152, 2314, 2732
MaeI CTAG 4 cut(s) 1572, 1602, 1907, 2111
MaeII ACGT 4 cut(s) 170, 482, 1720, 2134
MaeIII GTNAC 4 cut(s) 1229, 1409, 1614, 1944
MalI GATC 9 cut(s) 231, 668, 1389, 1635, 1687, 2049, 2109, 2193, 2662
MbiI CCGCTC 1 cut(s) 2506
MboI GATC 9 cut(s) 229, 666, 1387, 1633, 1685, 2047, 2107, 2191, 2660
MflI RGATCY 3 cut(s) 666, 1685, 2047
MhlI GDGCHC 3 cut(s) 342, 607, 2013
MluCI AATT 7 cut(s) 159, 292, 954, 1827, 2014, 2449, 2491
MlyI GAGTC 4 cut(s) 660, 897, 1586, 2644
MmeI TCCRAC 3 cut(s) 544, 1152, 2109
MroXI GAANNNNTTC 2 cut(s) 696, 849
MseI TTAA 4 cut(s) 378, 1418, 1964, 2124
MslI CAYNNNNRTG 1 cut(s) 2289
MspA1I CMGCKG 2 cut(s) 2366, 2541
MspCI CTTAAG 1 cut(s) 377
MspI CCGG 2 cut(s) 793, 1217
MspR9I CCNGG 7 cut(s) 81, 175, 272, 794, 1217, 1425, 2690
Mva1269I GAATGC 1 cut(s) 1855
MvaI CCWGG 5 cut(s) 81, 175, 272, 1425, 2690
MvnI CGCG 1 cut(s) 2541
NciI CCSGG 2 cut(s) 794, 1217
NcoI CCATGG 1 cut(s) 1746
NdeII GATC 9 cut(s) 229, 666, 1387, 1633, 1685, 2047, 2107, 2191, 2660
NheI GCTAGC 1 cut(s) 1571
NlaIV GGNNCC 3 cut(s) 1035, 1207, 2513
NmuCI GTSAC 3 cut(s) 1229, 1409, 1614
NsbI TGCGCA 1 cut(s) 902
NspI RCATGY 2 cut(s) 764, 1697
NspV TTCGAA 1 cut(s) 2259
PaeR7I CTCGAG 1 cut(s) 1796
PasI CCCWGGG 1 cut(s) 271
PciI ACATGT 1 cut(s) 760
PctI GAATGC 1 cut(s) 1855
PdmI GAANNNNTTC 2 cut(s) 696, 849
PfeI GAWTC 9 cut(s) 12, 92, 1373, 1702, 1751, 1792, 2261, 2369, 2530
PfoI TCCNGGA 2 cut(s) 173, 792
PleI GAGTC 4 cut(s) 659, 896, 1585, 2643
PpsI GAGTC 4 cut(s) 659, 896, 1585, 2643
PscI ACATGT 1 cut(s) 760
PsiI TTATAA 1 cut(s) 1163
Psp124BI GAGCTC 1 cut(s) 607
Psp1406I AACGTT 1 cut(s) 482
Psp6I CCWGG 5 cut(s) 79, 173, 270, 1423, 2688
PspFI CCCAGC 1 cut(s) 1061
PspGI CCWGG 5 cut(s) 79, 173, 270, 1423, 2688
PspN4I GGNNCC 3 cut(s) 1035, 1207, 2513
PspPI GGNCC 5 cut(s) 83, 134, 523, 1205, 2543
PstI CTGCAG 1 cut(s) 685
PsuI RGATCY 3 cut(s) 666, 1685, 2047
PvuII CAGCTG 1 cut(s) 2366
RsaI GTAC 1 cut(s) 1708
RsaNI GTAC 1 cut(s) 1707
RseI CAYNNNNRTG 1 cut(s) 2289
SacI GAGCTC 1 cut(s) 607
SacII CCGCGG 1 cut(s) 2542
SalI GTCGAC 1 cut(s) 2739
SaqAI TTAA 4 cut(s) 378, 1418, 1964, 2124
Sau3AI GATC 9 cut(s) 229, 666, 1387, 1633, 1685, 2047, 2107, 2191, 2660
Sau96I GGNCC 5 cut(s) 83, 134, 523, 1205, 2543
SchI GAGTC 4 cut(s) 660, 897, 1586, 2644
ScrFI CCNGG 7 cut(s) 81, 175, 272, 794, 1217, 1425, 2690
SduI GDGCHC 3 cut(s) 342, 607, 2013
SfaNI GCATC 7 cut(s) 31, 830, 957, 1294, 2152, 2314, 2732
SfcI CTRYAG 5 cut(s) 555, 681, 1584, 1934, 2403
Sfr274I CTCGAG 1 cut(s) 1796
Sfr303I CCGCGG 1 cut(s) 2542
SfuI TTCGAA 1 cut(s) 2259
SgrBI CCGCGG 1 cut(s) 2542
SinI GGWCC 4 cut(s) 134, 523, 1205, 2543
SlaI CTCGAG 1 cut(s) 1796
SmiMI CAYNNNNRTG 1 cut(s) 2289
SmlI CTYRAG 5 cut(s) 377, 1149, 1769, 1796, 1913
SmoI CTYRAG 5 cut(s) 377, 1149, 1769, 1796, 1913
Sse9I AATT 7 cut(s) 159, 292, 954, 1827, 2014, 2449, 2491
SspI AATATT 1 cut(s) 1497
SspMI CTAG 4 cut(s) 1572, 1602, 1907, 2111
SstI GAGCTC 1 cut(s) 607
StyD4I CCNGG 7 cut(s) 79, 173, 270, 792, 1215, 1423, 2688
StyI CCWWGG 2 cut(s) 585, 1746
TaiI ACGT 4 cut(s) 173, 485, 1723, 2137
TaqI TCGA 5 cut(s) 886, 1797, 1977, 2259, 2740
TaqII GACCGA 1 cut(s) 2337
TasI AATT 7 cut(s) 159, 292, 954, 1827, 2014, 2449, 2491
TauI GCSGC 5 cut(s) 456, 1139, 2362, 2509, 2541
TfiI GAWTC 9 cut(s) 12, 92, 1373, 1702, 1751, 1792, 2261, 2369, 2530
Tru1I TTAA 4 cut(s) 378, 1418, 1964, 2124
Tru9I TTAA 4 cut(s) 378, 1418, 1964, 2124
TscAI CASTG 8 cut(s) 307, 552, 843, 1234, 1531, 1569, 2239, 2394
TseFI GTSAC 3 cut(s) 1229, 1409, 1614
Tsp45I GTSAC 3 cut(s) 1229, 1409, 1614
TspDTI ATGAA 8 cut(s) 735, 1302, 1311, 1335, 1445, 1659, 2046, 2610
TspGWI ACGGA 3 cut(s) 597, 2312, 2716
TspRI CASTG 8 cut(s) 307, 552, 843, 1234, 1531, 1569, 2239, 2394
Vha464I CTTAAG 1 cut(s) 377
VpaK11BI GGWCC 4 cut(s) 134, 523, 1205, 2543
XagI CCTNNNNNAGG 1 cut(s) 1443
XapI RAATTY 2 cut(s) 954, 2491
XbaI TCTAGA 1 cut(s) 1601
XceI RCATGY 2 cut(s) 764, 1697
XhoI CTCGAG 1 cut(s) 1796
XmiI GTMKAC 1 cut(s) 2740
XmnI GAANNNNTTC 2 cut(s) 696, 849
XspI CTAG 4 cut(s) 1572, 1602, 1907, 2111
ZraI GACGTC 1 cut(s) 171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.