Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0004143

Physical Location & Seq

Genomic Coordinates Reverse (-)

47373508 .. 47384238

Gene Structure 10731 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G583400.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGAATTTGTTGAATAGCAGCGGCAACAAAAAAAGAGAGCTTGGCTTTCTCATTCTCTACGCAGCTGCTTTCTACGCCTTCATCATTCATCGATCCCTTCAGCTCTCTCGTGATCATTATCTTAAACTCTTTGGTTTGCGTCCTGGATGGTTGTTGCCTCATCGCCTCAATGATGTTTCTGATGCACAATGGAGAAACTTTCAAGGAAATTTACCTGTTCTTACTGTTGTTTTTACACTTTTTACGTTGATCGCTAATTTATTGAGGACAAGCTTTCACTTAAAAGCGAGAGGGATGTCCATTATTTGGATTTTGATATCTTTCACATACCTATCATATCTGCATGGAGCCTGCATAATATTTATCCTCTCAATCGCTTCAGTGAATTTTCTTTTTGTAAAGATATTTGCACGAACAAAGTACTTCTCTTTCGTATTTTGGATTTTCAACATATTCTTTCTTCTGTGCAATCGTGTTTATGAAGGATATTCATTTTACATGATTGGGCAACGGTGGGCATATTTGGATAACTTTCGGGGCACTTTCAGATGGCACATTTGCTTTAACTTTGTTGTTTTGCGCATGATAAGCTTTGGCTATGATTACCATTGGGCACATCGAGATTCTCATTTTGACCATAAGAAACACATTCAACGCTGCGATATTTGTAAATCAGGGAAAACTTGTTACCAAAGTTTACAGGAGAGAGGTGTCCAGAATGACAAATTTTCCTTTATGACTTACCTTTCTTATTTGGTATATGCACCACTTTATCTTGCTGGGCCGATTGTTAGCTTCAATGCATTTGCCTCACAGTTGGATGTTCCTCAAAATAACTTATCAGCTAGAGACATTGCTTGGTATGGTTTGCGCTGGGTATTCAGTCTTCTTCTGATGGAACTAATGACACATCTTTTTTATTACAATGCGTTTGCAATCAGTGGCATGTGGAAAGAGTTACATCCTATGGATGTGTTTATTATTGGATATGGGGTTTTAATCTTCATGTGGCTAAAGTTTTTTCTGATATGGCGCTATTTCCGGTTCTGGTCACTGATATGTGGCATTGAGGTCCCTGAGAATATGCCAAGGTGTATAAATAATTGCTACAACCTGGAAACCTTTTGGAAGAACTGGCATGCTTCCTATAACAAATGGCTTGTGAGGTATTTGTACATTCCTCTTGGGGGCACTCGGAGGAAGCTTCTCAATGTGTGGGTTGTATTCACATTTGTTGCCATTTGGCATGATCTAGAGTGGAAGCTTCTTTCCTGGGCATGGCTGACGTGCTTATTCTTTATTCCGGAAATGATATTAAAATCAGCAGTAAATGCATTTCAGGTTGAGAGTACTCATGGGGAGTTTGTTGTTCGCGAACTAAGTGCAGTTGCTGGTGCTATCACTATCACTTGTCTCATGGTAGCAAACCTTGTTGGTTTTGTTATTGGACCATCTGGCATTAGTTGGTTGATTTCTCAATTCCTTAACAGAGAAGGACTACCTGTTCTGGCTGGCATGCTTTTGACGTTTTATGTAGGGACAAAGCTTATGTTCCACATCCATGATGCAAAGCAAAGTAGCAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBOAT

Protein Analysis

529

Amino Acids

62.18

Weight (kDa)

9.43

Isoelectric Point (pI)

39.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G57600 AT1G57600 AT1G57600 AT1G57600
fragaria_vesca	FvH4_7g05560 FvH4_7g05560 FvH4_7g05560 FvH4_7g05560 FvH4_7g05560
malus_domestica	MD08G1246100.v1.1 MD15G1441300.v1.1
prunus_persica	Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1
pyrus_communis	pycom08g21360
rosa_chinensis	RchiOBHm_Chr1g0332651
rosa_laevigata	RLG00000029649
rosa_multiflora	Rmu_sc0027439.1_g000001
rosa_roxburghii	Rroxscaffold_1G00014710 Rroxscaffold_1G00014720 Rroxscaffold_4G00318080
rosa_rugosa	Rorug01G0105200
rosa_samantha	Rh1AG127000 Rh1BG096700 Rh1DG132200
rosa_wichuraiana	Rw1G010580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	581
AccB7I	CCANNNNNTGG	1 cut(s)	306
AccII	CGCG	1 cut(s)	1374
AccIII	TCCGGA	1 cut(s)	1303
AciI	CCGC	1 cut(s)	21
AclWI	GGATC	1 cut(s)	87
AcsI	RAATTY	4 cut(s)	4, 208, 385, 725
AcuI	CTGAAG	2 cut(s)	83, 363
AfaI	GTAC	3 cut(s)	422, 1175, 1351
AfiI	CCNNNNNNNGG	3 cut(s)	306, 1187, 1278
AgsI	TTSAA	5 cut(s)	13, 203, 448, 653, 799
AjiI	CACGTC	1 cut(s)	1287
AjnI	CCWGG	3 cut(s)	142, 1113, 1271
AloI	GAACNNNNNNTCC	2 cut(s)	1488, 1520
Alw26I	GTCTC	2 cut(s)	843, 1418
AlwI	GGATC	1 cut(s)	87
AlwNI	CAGNNNCTG	1 cut(s)	1391
Aor13HI	TCCGGA	1 cut(s)	1303
AoxI	GGCC	1 cut(s)	782
ApeKI	GCWGC	5 cut(s)	18, 62, 65, 657, 1581
ApoI	RAATTY	4 cut(s)	4, 208, 385, 725
AspLEI	GCGC	3 cut(s)	582, 873, 1035
AspS9I	GGNCC	3 cut(s)	782, 1072, 1448
AvaII	GGWCC	2 cut(s)	1072, 1448
BaeGI	GKGCMC	3 cut(s)	542, 616, 1193
BarI	GAAGNNNNNNTAC	2 cut(s)	870, 902
BauI	CACGAG	1 cut(s)	108
BbsI	GAAGAC	1 cut(s)	878
BbvI	GCAGC	4 cut(s)	30, 52, 74, 644
BccI	CCATC	4 cut(s)	141, 543, 889, 1459
BcgI	CGANNNNNNTGC	2 cut(s)	1364, 1398
BciT130I	CCWGG	3 cut(s)	144, 1115, 1273
BclI	TGATCA	1 cut(s)	112
BcoDI	GTCTC	2 cut(s)	843, 1418
BfaI	CTAG	2 cut(s)	846, 1253
BfoI	RGCGCY	1 cut(s)	1036
BisI	GCNGC	6 cut(s)	19, 22, 63, 66, 658, 1582
BlsI	GCNGC	6 cut(s)	20, 23, 64, 67, 659, 1583
BmcAI	AGTACT	2 cut(s)	422, 1351
Bme1390I	CCNGG	3 cut(s)	144, 1115, 1273
Bme18I	GGWCC	2 cut(s)	1072, 1448
BmgBI	CACGTC	1 cut(s)	1287
BmgT120I	GGNCC	3 cut(s)	782, 1072, 1448
BmiI	GGNNCC	2 cut(s)	349, 1074
BmrFI	CCNGG	3 cut(s)	144, 1115, 1273
BmsI	GCATC	2 cut(s)	172, 1555
BpiI	GAAGAC	1 cut(s)	878
Bsa29I	ATCGAT	1 cut(s)	91
BsaBI	GATNNNNATC	1 cut(s)	117
BsaJI	CCNNGG	2 cut(s)	1088, 1272
BsaWI	WCCGGW	2 cut(s)	1041, 1303
Bsc4I	CCNNNNNNNGG	3 cut(s)	306, 1187, 1278
Bse1I	ACTGG	1 cut(s)	1139
Bse3DI	GCAATG	1 cut(s)	852
Bse8I	GATNNNNATC	1 cut(s)	117
BseAI	TCCGGA	1 cut(s)	1303
BseBI	CCWGG	3 cut(s)	144, 1115, 1273
BseCI	ATCGAT	1 cut(s)	91
BseDI	CCNNGG	2 cut(s)	1088, 1272
BseGI	GGATG	6 cut(s)	152, 300, 826, 961, 976, 1557
BseJI	GATNNNNATC	1 cut(s)	117
BseLI	CCNNNNNNNGG	3 cut(s)	306, 1187, 1278
BseMI	GCAATG	1 cut(s)	852
BseMII	CTCAG	1 cut(s)	1068
BseNI	ACTGG	1 cut(s)	1139
BseSI	GKGCMC	3 cut(s)	542, 616, 1193
BseXI	GCAGC	4 cut(s)	30, 52, 74, 644
BseYI	CCCAGC	2 cut(s)	779, 873
BsgI	GTGCAG	1 cut(s)	1404
Bsh1236I	CGCG	1 cut(s)	1374
BshFI	GGCC	1 cut(s)	784
BshVI	ATCGAT	1 cut(s)	91
BsiSI	CCGG	2 cut(s)	1042, 1304
BslFI	GGGAC	2 cut(s)	1058, 1552
BslI	CCNNNNNNNGG	3 cut(s)	306, 1187, 1278
BsmAI	GTCTC	2 cut(s)	843, 1418
BsmFI	GGGAC	2 cut(s)	1058, 1552
BsnI	GGCC	1 cut(s)	784
Bsp1286I	GDGCHC	3 cut(s)	542, 616, 1193
Bsp13I	TCCGGA	1 cut(s)	1303
Bsp1407I	TGTACA	1 cut(s)	1173
Bsp143I	GATC	4 cut(s)	92, 112, 249, 1249
Bsp68I	TCGCGA	1 cut(s)	1374
BspACI	CCGC	1 cut(s)	21
BspANI	GGCC	1 cut(s)	784
BspCNI	CTCAG	1 cut(s)	1069
BspDI	ATCGAT	1 cut(s)	91
BspEI	TCCGGA	1 cut(s)	1303
BspFNI	CGCG	1 cut(s)	1374
BspLI	GGNNCC	2 cut(s)	349, 1074
BspPI	GGATC	1 cut(s)	87
BsrDI	GCAATG	1 cut(s)	852
BsrGI	TGTACA	1 cut(s)	1173
BsrI	ACTGG	1 cut(s)	1139
BssECI	CCNNGG	2 cut(s)	1088, 1272
BssMI	GATC	4 cut(s)	92, 112, 249, 1249
BssSI	CACGAG	1 cut(s)	108
BssT1I	CCWWGG	1 cut(s)	1088
Bst2BI	CACGAG	1 cut(s)	108
Bst2UI	CCWGG	3 cut(s)	144, 1115, 1273
Bst4CI	ACNGT	3 cut(s)	226, 513, 816
BstAPI	GCANNNNNTGC	1 cut(s)	1331
BstAUI	TGTACA	1 cut(s)	1173
BstC8I	GCNNGC	4 cut(s)	352, 1140, 1513, 1517
BstDEI	CTNAG	2 cut(s)	1077, 1379
BstF5I	GGATG	6 cut(s)	152, 300, 826, 961, 976, 1557
BstFNI	CGCG	1 cut(s)	1374
BstH2I	RGCGCY	1 cut(s)	1036
BstHHI	GCGC	3 cut(s)	582, 873, 1035
BstKTI	GATC	4 cut(s)	95, 115, 252, 1252
BstMAI	GTCTC	2 cut(s)	843, 1418
BstMBI	GATC	4 cut(s)	92, 112, 249, 1249
BstMWI	GCNNNNNNNGC	3 cut(s)	74, 588, 1331
BstNI	CCWGG	3 cut(s)	144, 1115, 1273
BstNSI	RCATGY	3 cut(s)	949, 1142, 1519
BstSCI	CCNGG	3 cut(s)	142, 1113, 1271
BstSLI	GKGCMC	3 cut(s)	542, 616, 1193
BstUI	CGCG	1 cut(s)	1374
BstV1I	GCAGC	4 cut(s)	30, 52, 74, 644
BstV2I	GAAGAC	1 cut(s)	878
Bsu15I	ATCGAT	1 cut(s)	91
BsuRI	GGCC	1 cut(s)	784
BsuTUI	ATCGAT	1 cut(s)	91
BtgZI	GCGATG	1 cut(s)	146
BtrI	CACGTC	1 cut(s)	1287
BtsCI	GGATG	6 cut(s)	152, 300, 826, 961, 976, 1557
BtsIMutI	CAGTG	3 cut(s)	387, 946, 1052
BtuMI	TCGCGA	1 cut(s)	1374
Cac8I	GCNNGC	4 cut(s)	352, 1140, 1513, 1517
CaiI	CAGNNNCTG	1 cut(s)	1391
CfoI	GCGC	3 cut(s)	582, 873, 1035
Cfr13I	GGNCC	3 cut(s)	782, 1072, 1448
ClaI	ATCGAT	1 cut(s)	91
CseI	GACGC	1 cut(s)	128
Csp6I	GTAC	3 cut(s)	421, 1174, 1350
CviQI	GTAC	3 cut(s)	421, 1174, 1350
DdeI	CTNAG	2 cut(s)	1077, 1379
DpnI	GATC	4 cut(s)	94, 114, 251, 1251
DpnII	GATC	4 cut(s)	92, 112, 249, 1249
Eco130I	CCWWGG	1 cut(s)	1088
Eco32I	GATATC	1 cut(s)	318
Eco47I	GGWCC	2 cut(s)	1072, 1448
Eco57I	CTGAAG	2 cut(s)	83, 363
EcoO109I	RGGNCCY	1 cut(s)	1072
EcoRII	CCWGG	3 cut(s)	142, 1113, 1271
EcoRV	GATATC	1 cut(s)	318
EcoT14I	CCWWGG	1 cut(s)	1088
EcoT22I	ATGCAT	2 cut(s)	805, 1336
ErhI	CCWWGG	1 cut(s)	1088
FaqI	GGGAC	2 cut(s)	1058, 1552
FbaI	TGATCA	1 cut(s)	112
Fnu4HI	GCNGC	6 cut(s)	19, 22, 63, 66, 658, 1582
FokI	GGATG	6 cut(s)	159, 307, 833, 948, 983, 1544
Fsp4HI	GCNGC	6 cut(s)	19, 22, 63, 66, 658, 1582
FspBI	CTAG	2 cut(s)	846, 1253
FspI	TGCGCA	1 cut(s)	581
GlaI	GCGC	3 cut(s)	581, 872, 1034
GluI	GCNGC	6 cut(s)	19, 22, 63, 66, 658, 1582
GsaI	CCCAGC	2 cut(s)	783, 877
HaeII	RGCGCY	1 cut(s)	1036
HaeIII	GGCC	1 cut(s)	784
HapII	CCGG	2 cut(s)	1042, 1304
HgaI	GACGC	1 cut(s)	128
HhaI	GCGC	3 cut(s)	582, 873, 1035
Hin6I	GCGC	3 cut(s)	580, 871, 1033
HinP1I	GCGC	3 cut(s)	580, 871, 1033
HindIII	AAGCTT	5 cut(s)	271, 589, 1202, 1262, 1544
HinfI	GANTC	1 cut(s)	623
HpaII	CCGG	2 cut(s)	1042, 1304
Hpy166II	GTNNAC	1 cut(s)	698
Hpy188I	TCNGA	5 cut(s)	181, 548, 894, 1026, 1197
Hpy188III	TCNNGA	6 cut(s)	110, 620, 715, 1253, 1304, 1373
Hpy8I	GTNNAC	1 cut(s)	698
HpyAV	CCTTC	4 cut(s)	88, 107, 476, 1487
HpyCH4III	ACNGT	3 cut(s)	226, 513, 816
HpyCH4IV	ACGT	3 cut(s)	245, 1286, 1526
HpyF10VI	GCNNNNNNNGC	3 cut(s)	74, 588, 1331
HpyF3I	CTNAG	2 cut(s)	1077, 1379
HpySE526I	ACGT	3 cut(s)	245, 1286, 1526
HspAI	GCGC	3 cut(s)	580, 871, 1033
Kpn2I	TCCGGA	1 cut(s)	1303
Ksp22I	TGATCA	1 cut(s)	112
Kzo9I	GATC	4 cut(s)	92, 112, 249, 1249
LmnI	GCTCC	1 cut(s)	347
Lsp1109I	GCAGC	4 cut(s)	30, 52, 74, 644
LweI	GCATC	2 cut(s)	172, 1555
MaeI	CTAG	2 cut(s)	846, 1253
MaeII	ACGT	3 cut(s)	245, 1286, 1526
MaeIII	GTNAC	3 cut(s)	686, 957, 1050
MalI	GATC	4 cut(s)	94, 114, 251, 1251
MboI	GATC	4 cut(s)	92, 112, 249, 1249
MboII	GAAGA	5 cut(s)	452, 878, 881, 994, 1141
MhlI	GDGCHC	3 cut(s)	542, 616, 1193
MluCI	AATT	7 cut(s)	4, 208, 256, 385, 725, 1102, 1478
MmeI	TCCRAC	1 cut(s)	798
Mph1103I	ATGCAT	2 cut(s)	805, 1336
MroI	TCCGGA	1 cut(s)	1303
MseI	TTAA	6 cut(s)	123, 281, 564, 998, 1316, 1485
MslI	CAYNNNNRTG	2 cut(s)	1057, 1560
MspA1I	CMGCKG	2 cut(s)	21, 65
MspI	CCGG	2 cut(s)	1042, 1304
MspR9I	CCNGG	3 cut(s)	144, 1115, 1273
MvaI	CCWGG	3 cut(s)	144, 1115, 1273
MvnI	CGCG	1 cut(s)	1374
MwoI	GCNNNNNNNGC	3 cut(s)	74, 588, 1331
NdeII	GATC	4 cut(s)	92, 112, 249, 1249
NlaIV	GGNNCC	2 cut(s)	349, 1074
NmuCI	GTSAC	1 cut(s)	1050
NruI	TCGCGA	1 cut(s)	1374
NsbI	TGCGCA	1 cut(s)	581
NsiI	ATGCAT	2 cut(s)	805, 1336
NspI	RCATGY	3 cut(s)	949, 1142, 1519
PaeI	GCATGC	2 cut(s)	1142, 1519
PfeI	GAWTC	1 cut(s)	623
PflMI	CCANNNNNTGG	1 cut(s)	306
PfoI	TCCNGGA	1 cut(s)	142
PkrI	GCNGC	6 cut(s)	20, 23, 64, 67, 659, 1583
PpuMI	RGGWCCY	1 cut(s)	1072
Psp5II	RGGWCCY	1 cut(s)	1072
Psp6I	CCWGG	3 cut(s)	142, 1113, 1271
PspFI	CCCAGC	2 cut(s)	779, 873
PspGI	CCWGG	3 cut(s)	142, 1113, 1271
PspN4I	GGNNCC	2 cut(s)	349, 1074
PspPI	GGNCC	3 cut(s)	782, 1072, 1448
PspPPI	RGGWCCY	1 cut(s)	1072
PstNI	CAGNNNCTG	1 cut(s)	1391
PvuII	CAGCTG	1 cut(s)	65
RruI	TCGCGA	1 cut(s)	1374
RsaI	GTAC	3 cut(s)	422, 1175, 1351
RsaNI	GTAC	3 cut(s)	421, 1174, 1350
RseI	CAYNNNNRTG	2 cut(s)	1057, 1560
SaqAI	TTAA	6 cut(s)	123, 281, 564, 998, 1316, 1485
SatI	GCNGC	6 cut(s)	19, 22, 63, 66, 658, 1582
Sau3AI	GATC	4 cut(s)	92, 112, 249, 1249
Sau96I	GGNCC	3 cut(s)	782, 1072, 1448
ScaI	AGTACT	2 cut(s)	422, 1351
ScrFI	CCNGG	3 cut(s)	144, 1115, 1273
SduI	GDGCHC	3 cut(s)	542, 616, 1193
SfaNI	GCATC	2 cut(s)	172, 1555
SinI	GGWCC	2 cut(s)	1072, 1448
SmiMI	CAYNNNNRTG	2 cut(s)	1057, 1560
SphI	GCATGC	2 cut(s)	1142, 1519
Sse9I	AATT	7 cut(s)	4, 208, 256, 385, 725, 1102, 1478
SsiI	CCGC	1 cut(s)	21
SspI	AATATT	1 cut(s)	360
SspMI	CTAG	2 cut(s)	846, 1253
StyD4I	CCNGG	3 cut(s)	142, 1113, 1271
StyI	CCWWGG	1 cut(s)	1088
TaaI	ACNGT	3 cut(s)	226, 513, 816
TaiI	ACGT	3 cut(s)	248, 1289, 1529
TaqI	TCGA	2 cut(s)	91, 619
TasI	AATT	7 cut(s)	4, 208, 256, 385, 725, 1102, 1478
TatI	WGTACW	3 cut(s)	420, 1173, 1349
TauI	GCSGC	1 cut(s)	24
TfiI	GAWTC	1 cut(s)	623
Tru1I	TTAA	6 cut(s)	123, 281, 564, 998, 1316, 1485
Tru9I	TTAA	6 cut(s)	123, 281, 564, 998, 1316, 1485
TscAI	CASTG	3 cut(s)	387, 946, 1059
TseFI	GTSAC	1 cut(s)	1050
TseI	GCWGC	5 cut(s)	18, 62, 65, 657, 1581
Tsp45I	GTSAC	1 cut(s)	1050
TspDTI	ATGAA	6 cut(s)	17, 70, 77, 480, 495, 994
TspRI	CASTG	3 cut(s)	387, 946, 1059
Van91I	CCANNNNNTGG	1 cut(s)	306
VpaK11BI	GGWCC	2 cut(s)	1072, 1448
XapI	RAATTY	4 cut(s)	4, 208, 385, 725
XbaI	TCTAGA	1 cut(s)	1252
XceI	RCATGY	3 cut(s)	949, 1142, 1519
XspI	CTAG	2 cut(s)	846, 1253
ZrmI	AGTACT	2 cut(s)	422, 1351
Zsp2I	ATGCAT	2 cut(s)	805, 1336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.