Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0004143

Physical Location & Seq

Genomic Coordinates Reverse (-)

20857837 .. 20865608

Gene Structure 7772 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g21360.17

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1326 bp

ATGAGGACAAGCTTTCATTTAAAAGCGAGAGGGATGTCCATTATTTGGATTTTGATTTCTTTCACATACCTAGCATATCTGCATGGAGCCTGCATTCTATTTGTCCTCTCAATCGCTTCAATGAATTTTCTCTTGGTAAAGATATTTGCACGAACAAAATATTTCCCTTTTGTAGTATGGATTTTCAACATATTCTTTCTTCTGTGCAATCGTGTTTATGAAGGATATTCATTCTCCACAATTGGGCAACGCTGGGCATATTTGGACAACTTTCGGGGCACCTTTAGATGGCACATTTGCTTTAACTTTGTTGTTTTGCGGATGATAAGCTTTGGGTATGATTACCATTGGGCCCACCGAGATTCTCGTTTTGACCATAAGAAACACATTCAGCGCTGCAATATTTGTAAATCAGGGAAAACTTGTTACCATGTTTTACAGGAGAGAGGTGTCCAGAATGACAAGTATGCCTTTACGACGTACCTTGCTTATTTGGTGTATGCACCTCTTTATCTTACTGGGCCGATTGTTAGCTTCAATGCATTTGCCTCACAGTTGGATGTTCCTCAAGATAACTTTTCAGCTAAAGACATTGCTTGGTATGGTTTGCGCTGGGTGTTCAGTCTTCTTCTGATGGAACTAATGACACATCTTTTCTATTACAATGCGTTTGCAATCAGTGGCATGTGGAAAGAGTTACATCCTATGGATGTGTTTATTATTGGATATGGGGTCTTAATGTTCATGTGGCTAAAGTTTTTTCTCATATGGCGCTATTTCCGGTTCTGGTCACTGATATGTGGCATTGAGGTCCCGGAGAATATGCCGAGGTGTATAAATAATTGCTACAACTTGGAAACTTTTTGGAAGAACTGGCATGCTTCCTATAACAAATGGCTTGTGAGGTATTTGTACATTCCTCTTGGGGGCACTCGGAGAAAGCTTCTCAATGTCTGGGTTGTATTCACATTTGTTGCCATTTGGCATGATCTAGAATGGAAGCTTCTTTCATGGGCATGGCTGACTTGCTTATTCTTTATTCCGGAAATGATACTGAAATCAGCAACCAATGCATTTCAGTTCAAGAGTACTCATGGGGAGTTTGTTGTTCGTGAACTTAGTGCGGTAGCTGGTGCAATCACGATCACTTGCCTCATGGTAGCAAACCTTGTTGGTTTTGTTATTGGACCATCTGGGATTAGTTGGTTGATTTCTCAATTCCTTAAACGAGAAGGACTCCCCGTTTTGGCTGGCATGCTTTTGACATTTTATGTAGGGACAAAGCTTATGTTCCACATCCGTGATGCAAAGCAAAGTAGCAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBOAT

Protein Analysis

442

Amino Acids

52.11

Weight (kDa)

9.46

Isoelectric Point (pI)

35.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G57600 AT1G57600 AT1G57600 AT1G57600
fragaria_vesca	FvH4_7g05560 FvH4_7g05560 FvH4_7g05560 FvH4_7g05560 FvH4_7g05560
malus_domestica	MD08G1246100.v1.1 MD15G1441300.v1.1
prunus_persica	Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1 Prupe.1G583400_v2.0.a1
pyrus_communis	pycom08g21360
rosa_chinensis	RchiOBHm_Chr1g0332651
rosa_laevigata	RLG00000029649
rosa_multiflora	Rmu_sc0027439.1_g000001
rosa_roxburghii	Rroxscaffold_1G00014710 Rroxscaffold_1G00014720 Rroxscaffold_4G00318080
rosa_rugosa	Rorug01G0105200
rosa_samantha	Rh1AG127000 Rh1BG096700 Rh1DG132200
rosa_wichuraiana	Rw1G010580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	278
AccB7I	CCANNNNNTGG	1 cut(s)	45
AccIII	TCCGGA	1 cut(s)	1042
AciI	CCGC	2 cut(s)	319, 1124
AcsI	RAATTY	1 cut(s)	124
AfaI	GTAC	3 cut(s)	482, 914, 1090
AfeI	AGCGCT	1 cut(s)	395
AfiI	CCNNNNNNNGG	5 cut(s)	45, 243, 288, 926, 1246
AgsI	TTSAA	4 cut(s)	120, 187, 538, 1084
AjuI	GAANNNNNNNTTGG	2 cut(s)	116, 148
AleI	CACNNNNGTG	1 cut(s)	1299
AluBI	AGCT	9 cut(s)	12, 330, 534, 584, 943, 1003, 1130, 1285, 1323
AluI	AGCT	9 cut(s)	12, 330, 534, 584, 943, 1003, 1130, 1285, 1323
Aor13HI	TCCGGA	1 cut(s)	1042
Aor51HI	AGCGCT	1 cut(s)	395
AoxI	GGCC	2 cut(s)	351, 521
ApaI	GGGCCC	1 cut(s)	355
ApeKI	GCWGC	2 cut(s)	396, 1320
ApoI	RAATTY	1 cut(s)	124
AspLEI	GCGC	3 cut(s)	396, 612, 774
AspS9I	GGNCC	5 cut(s)	351, 352, 521, 811, 1187
AsuC2I	CCSGG	1 cut(s)	815
AvaII	GGWCC	2 cut(s)	811, 1187
BaeGI	GKGCMC	3 cut(s)	281, 355, 932
BanI	GGYRCC	1 cut(s)	278
BanII	GRGCYC	1 cut(s)	355
BbsI	GAAGAC	1 cut(s)	617
BbvI	GCAGC	1 cut(s)	383
BccI	CCATC	3 cut(s)	282, 628, 1198
BcnI	CCSGG	1 cut(s)	815
BfaI	CTAG	2 cut(s)	71, 992
BfoI	RGCGCY	2 cut(s)	397, 775
BisI	GCNGC	2 cut(s)	397, 1321
BlsI	GCNGC	2 cut(s)	398, 1322
BmcAI	AGTACT	1 cut(s)	1090
Bme1390I	CCNGG	1 cut(s)	815
Bme18I	GGWCC	2 cut(s)	811, 1187
BmgT120I	GGNCC	5 cut(s)	351, 352, 521, 811, 1187
BmiI	GGNNCC	4 cut(s)	88, 280, 353, 813
BmrFI	CCNGG	1 cut(s)	815
BmrI	ACTGGG	1 cut(s)	528
BmsI	GCATC	1 cut(s)	1294
BmuI	ACTGGG	1 cut(s)	528
BpiI	GAAGAC	1 cut(s)	617
BplI	GAGNNNNNCTC	2 cut(s)	1221, 1253
BpuEI	CTTGAG	1 cut(s)	552
BpuMI	CCSGG	1 cut(s)	815
BsaJI	CCNNGG	1 cut(s)	827
BsaWI	WCCGGW	2 cut(s)	780, 1042
Bsc4I	CCNNNNNNNGG	5 cut(s)	45, 243, 288, 926, 1246
Bse1I	ACTGG	2 cut(s)	523, 878
Bse3DI	GCAATG	1 cut(s)	591
BseAI	TCCGGA	1 cut(s)	1042
BseDI	CCNNGG	1 cut(s)	827
BseGI	GGATG	6 cut(s)	39, 327, 565, 700, 715, 1296
BseLI	CCNNNNNNNGG	5 cut(s)	45, 243, 288, 926, 1246
BseMI	GCAATG	1 cut(s)	591
BseNI	ACTGG	2 cut(s)	523, 878
BseSI	GKGCMC	3 cut(s)	281, 355, 932
BseXI	GCAGC	1 cut(s)	383
BseYI	CCCAGC	2 cut(s)	252, 612
BshFI	GGCC	2 cut(s)	353, 523
BshNI	GGYRCC	1 cut(s)	278
BsiSI	CCGG	3 cut(s)	781, 815, 1043
BslFI	GGGAC	2 cut(s)	797, 1291
BslI	CCNNNNNNNGG	5 cut(s)	45, 243, 288, 926, 1246
BsmFI	GGGAC	2 cut(s)	797, 1291
BsmI	GAATGC	1 cut(s)	93
BsnI	GGCC	2 cut(s)	353, 523
Bsp120I	GGGCCC	1 cut(s)	351
Bsp1286I	GDGCHC	3 cut(s)	281, 355, 932
Bsp13I	TCCGGA	1 cut(s)	1042
Bsp1407I	TGTACA	1 cut(s)	912
Bsp143I	GATC	2 cut(s)	988, 1143
BspACI	CCGC	2 cut(s)	319, 1124
BspANI	GGCC	2 cut(s)	353, 523
BspEI	TCCGGA	1 cut(s)	1042
BspLI	GGNNCC	4 cut(s)	88, 280, 353, 813
BspT107I	GGYRCC	1 cut(s)	278
BsrDI	GCAATG	1 cut(s)	591
BsrGI	TGTACA	1 cut(s)	912
BsrI	ACTGG	2 cut(s)	523, 878
BssECI	CCNNGG	1 cut(s)	827
BssMI	GATC	2 cut(s)	988, 1143
Bst4CI	ACNGT	1 cut(s)	555
BstAPI	GCANNNNNTGC	1 cut(s)	1070
BstAUI	TGTACA	1 cut(s)	912
BstC8I	GCNNGC	4 cut(s)	91, 879, 1252, 1256
BstDEI	CTNAG	1 cut(s)	1118
BstF5I	GGATG	6 cut(s)	39, 327, 565, 700, 715, 1296
BstH2I	RGCGCY	2 cut(s)	397, 775
BstHHI	GCGC	3 cut(s)	396, 612, 774
BstKTI	GATC	2 cut(s)	991, 1146
BstMBI	GATC	2 cut(s)	988, 1143
BstMWI	GCNNNNNNNGC	1 cut(s)	1070
BstNSI	RCATGY	3 cut(s)	688, 881, 1258
BstSCI	CCNGG	1 cut(s)	813
BstSLI	GKGCMC	3 cut(s)	281, 355, 932
BstV1I	GCAGC	1 cut(s)	383
BstV2I	GAAGAC	1 cut(s)	617
BsuRI	GGCC	2 cut(s)	353, 523
BtsCI	GGATG	6 cut(s)	39, 327, 565, 700, 715, 1296
BtsIMutI	CAGTG	2 cut(s)	685, 791
Cac8I	GCNNGC	4 cut(s)	91, 879, 1252, 1256
CfoI	GCGC	3 cut(s)	396, 612, 774
Cfr13I	GGNCC	5 cut(s)	351, 352, 521, 811, 1187
Csp6I	GTAC	3 cut(s)	481, 913, 1089
CviQI	GTAC	3 cut(s)	481, 913, 1089
DdeI	CTNAG	1 cut(s)	1118
DpnI	GATC	2 cut(s)	990, 1145
DpnII	GATC	2 cut(s)	988, 1143
DraI	TTTAAA	1 cut(s)	21
Eco24I	GRGCYC	1 cut(s)	355
Eco47I	GGWCC	2 cut(s)	811, 1187
Eco47III	AGCGCT	1 cut(s)	395
EcoO109I	RGGNCCY	1 cut(s)	811
EcoT22I	ATGCAT	2 cut(s)	544, 1075
EcoT38I	GRGCYC	1 cut(s)	355
FalI	AAGNNNNNCTT	2 cut(s)	455, 487
FaqI	GGGAC	2 cut(s)	797, 1291
FauNDI	CATATG	1 cut(s)	767
Fnu4HI	GCNGC	2 cut(s)	397, 1321
FokI	GGATG	6 cut(s)	46, 334, 572, 687, 722, 1283
FriOI	GRGCYC	1 cut(s)	355
Fsp4HI	GCNGC	2 cut(s)	397, 1321
FspBI	CTAG	2 cut(s)	71, 992
GlaI	GCGC	3 cut(s)	395, 611, 773
GluI	GCNGC	2 cut(s)	397, 1321
GsaI	CCCAGC	2 cut(s)	256, 616
HaeII	RGCGCY	2 cut(s)	397, 775
HaeIII	GGCC	2 cut(s)	353, 523
HapII	CCGG	3 cut(s)	781, 815, 1043
HhaI	GCGC	3 cut(s)	396, 612, 774
Hin6I	GCGC	3 cut(s)	394, 610, 772
HinP1I	GCGC	3 cut(s)	394, 610, 772
HindIII	AAGCTT	5 cut(s)	10, 328, 941, 1001, 1283
HinfI	GANTC	2 cut(s)	362, 1236
HpaII	CCGG	3 cut(s)	781, 815, 1043
Hpy166II	GTNNAC	1 cut(s)	1115
Hpy188I	TCNGA	2 cut(s)	633, 936
Hpy188III	TCNNGA	7 cut(s)	454, 569, 992, 1043, 1084, 1112, 1141
Hpy8I	GTNNAC	1 cut(s)	1115
Hpy99I	CGWCG	1 cut(s)	481
HpyAV	CCTTC	2 cut(s)	215, 1226
HpyCH4III	ACNGT	1 cut(s)	555
HpyCH4IV	ACGT	1 cut(s)	479
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1070
HpyF3I	CTNAG	1 cut(s)	1118
HpySE526I	ACGT	1 cut(s)	479
HspAI	GCGC	3 cut(s)	394, 610, 772
Kpn2I	TCCGGA	1 cut(s)	1042
Kzo9I	GATC	2 cut(s)	988, 1143
LmnI	GCTCC	1 cut(s)	86
Lsp1109I	GCAGC	1 cut(s)	383
LweI	GCATC	1 cut(s)	1294
MaeI	CTAG	2 cut(s)	71, 992
MaeII	ACGT	1 cut(s)	479
MaeIII	GTNAC	3 cut(s)	425, 696, 789
MalI	GATC	2 cut(s)	990, 1145
MboI	GATC	2 cut(s)	988, 1143
MboII	GAAGA	4 cut(s)	191, 617, 620, 880
MfeI	CAATTG	1 cut(s)	240
MhlI	GDGCHC	3 cut(s)	281, 355, 932
MluCI	AATT	4 cut(s)	124, 240, 841, 1217
MlyI	GAGTC	1 cut(s)	1230
MmeI	TCCRAC	1 cut(s)	537
Mph1103I	ATGCAT	2 cut(s)	544, 1075
MroI	TCCGGA	1 cut(s)	1042
MseI	TTAA	4 cut(s)	20, 303, 737, 1224
MslI	CAYNNNNRTG	3 cut(s)	796, 1015, 1299
MspI	CCGG	3 cut(s)	781, 815, 1043
MspR9I	CCNGG	1 cut(s)	815
MunI	CAATTG	1 cut(s)	240
Mva1269I	GAATGC	1 cut(s)	93
MwoI	GCNNNNNNNGC	1 cut(s)	1070
NciI	CCSGG	1 cut(s)	815
NdeI	CATATG	1 cut(s)	767
NdeII	GATC	2 cut(s)	988, 1143
NlaIV	GGNNCC	4 cut(s)	88, 280, 353, 813
NmeAIII	GCCGAG	1 cut(s)	852
NmuCI	GTSAC	1 cut(s)	789
NsiI	ATGCAT	2 cut(s)	544, 1075
NspI	RCATGY	3 cut(s)	688, 881, 1258
OliI	CACNNNNGTG	1 cut(s)	1299
PaeI	GCATGC	2 cut(s)	881, 1258
PctI	GAATGC	1 cut(s)	93
PfeI	GAWTC	1 cut(s)	362
PflMI	CCANNNNNTGG	1 cut(s)	45
PfoI	TCCNGGA	1 cut(s)	813
PkrI	GCNGC	2 cut(s)	398, 1322
PleI	GAGTC	1 cut(s)	1230
PpsI	GAGTC	1 cut(s)	1230
PpuMI	RGGWCCY	1 cut(s)	811
Psp5II	RGGWCCY	1 cut(s)	811
PspFI	CCCAGC	2 cut(s)	252, 612
PspN4I	GGNNCC	4 cut(s)	88, 280, 353, 813
PspOMI	GGGCCC	1 cut(s)	351
PspPI	GGNCC	5 cut(s)	351, 352, 521, 811, 1187
PspPPI	RGGWCCY	1 cut(s)	811
RsaI	GTAC	3 cut(s)	482, 914, 1090
RsaNI	GTAC	3 cut(s)	481, 913, 1089
RseI	CAYNNNNRTG	3 cut(s)	796, 1015, 1299
SaqAI	TTAA	4 cut(s)	20, 303, 737, 1224
SatI	GCNGC	2 cut(s)	397, 1321
Sau3AI	GATC	2 cut(s)	988, 1143
Sau96I	GGNCC	5 cut(s)	351, 352, 521, 811, 1187
ScaI	AGTACT	1 cut(s)	1090
SchI	GAGTC	1 cut(s)	1230
ScrFI	CCNGG	1 cut(s)	815
SduI	GDGCHC	3 cut(s)	281, 355, 932
SfaNI	GCATC	1 cut(s)	1294
SinI	GGWCC	2 cut(s)	811, 1187
SmiMI	CAYNNNNRTG	3 cut(s)	796, 1015, 1299
SmlI	CTYRAG	1 cut(s)	567
SmoI	CTYRAG	1 cut(s)	567
SphI	GCATGC	2 cut(s)	881, 1258
Sse9I	AATT	4 cut(s)	124, 240, 841, 1217
SsiI	CCGC	2 cut(s)	319, 1124
SspI	AATATT	2 cut(s)	161, 403
SspMI	CTAG	2 cut(s)	71, 992
StyD4I	CCNGG	1 cut(s)	813
TaaI	ACNGT	1 cut(s)	555
TaiI	ACGT	1 cut(s)	482
TasI	AATT	4 cut(s)	124, 240, 841, 1217
TatI	WGTACW	2 cut(s)	912, 1088
TfiI	GAWTC	1 cut(s)	362
Tru1I	TTAA	4 cut(s)	20, 303, 737, 1224
Tru9I	TTAA	4 cut(s)	20, 303, 737, 1224
TscAI	CASTG	2 cut(s)	685, 798
TseFI	GTSAC	1 cut(s)	789
TseI	GCWGC	2 cut(s)	396, 1320
Tsp45I	GTSAC	1 cut(s)	789
TspDTI	ATGAA	6 cut(s)	5, 137, 219, 234, 733, 999
TspGWI	ACGGA	1 cut(s)	1289
TspRI	CASTG	2 cut(s)	685, 798
Van91I	CCANNNNNTGG	1 cut(s)	45
VpaK11BI	GGWCC	2 cut(s)	811, 1187
XapI	RAATTY	1 cut(s)	124
XbaI	TCTAGA	1 cut(s)	991
XceI	RCATGY	3 cut(s)	688, 881, 1258
XspI	CTAG	2 cut(s)	71, 992
ZrmI	AGTACT	1 cut(s)	1090
Zsp2I	ATGCAT	2 cut(s)	544, 1075

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.