Prupe.2G008000_v2.0.a1
ERF Family

and Fe(II)-dependent oxygenase superfamily protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
737281 .. 740368
3088 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G008000.1

Sequence Viewer

Length: 1053 bp
ATGGAGCTGACGGTGGTAGATCTGAGCTTGTACTTGGGATCGAAGGGCGAAGTGAAGGAGTTGTGCGGCGAGGTGAGCCGGAGTCTGAGAGAAACAGGTGCTCTGTTGGTCAAGGACCCCAGATGTACGGCCGAGGACAACGATCGCTTCCTCGATATGATGGAGAGGTACTTCGATAGACCGCCGGATTTCAAGCGACTCCAGGAGAGGCCCCAATTGCATTACCAGGTTGGGGTGACACCAGAGGGTGTGGAAGTGCCAAGAAGCCTTGTTGATGAAGAAATGCAGGAGAAATTGAAAGAAATGCCCAAAGAGTTCCAGCCATCCATTCCCAAGGGGGCAGATCGCAAATGGCGATACATGTGGAGAGTGGGTCCTCGACCATCAGAAACCCGCTTTCAGGAACTTAATGCAGAGCCGGTCGTACCCGAGGGGTTTCCTGAATGGAAAGATACCATGGATTCATGGGGTTACAAGATGATATCCGCAATAGAGGCTGTTGCTGAAATGGCTGCCATTGGGTTTGGCTTGCCAAAGGATGCATTCACTTCTCTTATGAAGCAGGGACCACACCTTCTAGCCCCAACAGGAAGTGACCTTCGGCATTATGGCCAGGAGGGTACTGTGTTTGCAGGATATCACTACGACCTTAACTTTCTAACCATTCATGGCAGAAGTAGATTTCCAGGTCTGAATATCTGGCTAAGAAATGGGCAAAAAGTTGAAGTGAAGGTTCCTGTAGGATGTCTTCTCATTCAGACTGGGAAGCAGATAGAGTGGTTGACTGCAGGAGATTGCATAGCTGGAATGCATGAAGTTGTTGTAACAAGCAGGACAGTTGATGCAATCAAACTAGCAACGGAGCAACATCGCTTACTTTGGAGAGTATCTTCTACATTGTTTGCCCACATAGCATCCGATGCTGTGTTAAAGCCCTTAGGTCGCTTTGCAGAATCCTCGCTTGCCAGTAAATATCCGGCGATTTATGCAGGAGAGTTTGTTGAACAGGAGCTTGCAGTAATCAATCTCAAAGGAAACAAAGGAGAACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

351

Amino Acids

39.48

Weight (kDa)

5.85

Isoelectric Point (pI)

46.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 66, 182, 394, 486
AclWI GGATC 1 cut(s) 46
AcoI YGGCCR 2 cut(s) 129, 610
AfaI GTAC 5 cut(s) 32, 127, 170, 426, 622
AfiI CCNNNNNNNGG 2 cut(s) 232, 400
AflIII ACRYGT 1 cut(s) 360
AgsI TTSAA 4 cut(s) 193, 298, 725, 1004
AjnI CCWGG 4 cut(s) 201, 225, 612, 685
AluBI AGCT 4 cut(s) 7, 27, 803, 1012
AluI AGCT 4 cut(s) 7, 27, 803, 1012
Alw21I GWGCWC 1 cut(s) 103
AlwI GGATC 1 cut(s) 46
Ama87I CYCGRG 1 cut(s) 428
AoxI GGCC 3 cut(s) 129, 209, 610
ApeKI GCWGC 1 cut(s) 512
AspS9I GGNCC 4 cut(s) 115, 210, 374, 566
AsuHPI GGTGA 2 cut(s) 85, 247
AvaI CYCGRG 1 cut(s) 428
AvaII GGWCC 3 cut(s) 115, 374, 566
AxyI CCTNAGG 1 cut(s) 937
BalI TGGCCA 1 cut(s) 612
BarI GAAGNNNNNNTAC 2 cut(s) 732, 764
BbsI GAAGAC 1 cut(s) 740
Bbv12I GWGCWC 1 cut(s) 103
BbvI GCAGC 1 cut(s) 499
BccI CCATC 3 cut(s) 154, 331, 391
BceAI ACGGC 1 cut(s) 144
BcgI CGANNNNNNTGC 2 cut(s) 939, 973
BciT130I CCWGG 4 cut(s) 203, 227, 614, 687
BfaI CTAG 2 cut(s) 578, 854
BfmI CTRYAG 2 cut(s) 738, 786
BglII AGATCT 1 cut(s) 19
BisI GCNGC 2 cut(s) 67, 513
BlsI GCNGC 2 cut(s) 68, 514
Bme1390I CCNGG 4 cut(s) 203, 227, 614, 687
Bme18I GGWCC 3 cut(s) 115, 374, 566
BmeT110I CYCGRG 1 cut(s) 428
BmgT120I GGNCC 4 cut(s) 115, 210, 374, 566
BmiI GGNNCC 5 cut(s) 117, 212, 375, 567, 735
BmrFI CCNGG 4 cut(s) 203, 227, 614, 687
BmrI ACTGGG 1 cut(s) 771
BmsI GCATC 4 cut(s) 529, 832, 910, 923
BmuI ACTGGG 1 cut(s) 771
BpiI GAAGAC 1 cut(s) 740
BpmI CTGGAG 1 cut(s) 185
BsaJI CCNNGG 4 cut(s) 132, 333, 429, 456
BsaXI ACNNNNNCTCC 4 cut(s) 358, 388, 984, 1014
Bsc4I CCNNNNNNNGG 2 cut(s) 232, 400
Bse118I RCCGGY 1 cut(s) 418
Bse1I ACTGG 2 cut(s) 766, 966
Bse21I CCTNAGG 1 cut(s) 937
BseBI CCWGG 4 cut(s) 203, 227, 614, 687
BseDI CCNNGG 4 cut(s) 132, 333, 429, 456
BseGI GGATG 4 cut(s) 323, 544, 749, 914
BseLI CCNNNNNNNGG 2 cut(s) 232, 400
BseMII CTCAG 2 cut(s) 14, 77
BseNI ACTGG 2 cut(s) 766, 966
BseX3I CGGCCG 1 cut(s) 129
BseXI GCAGC 1 cut(s) 499
Bsh1285I CGRYCG 3 cut(s) 132, 145, 423
BshFI GGCC 3 cut(s) 131, 211, 612
BsiEI CGRYCG 3 cut(s) 132, 145, 423
BsiHKAI GWGCWC 1 cut(s) 103
BsiHKCI CYCGRG 1 cut(s) 428
BsiSI CCGG 4 cut(s) 79, 185, 419, 977
BslFI GGGAC 1 cut(s) 579
BslI CCNNNNNNNGG 2 cut(s) 232, 400
BsmFI GGGAC 1 cut(s) 579
BsmI GAATGC 2 cut(s) 542, 813
BsnI GGCC 3 cut(s) 131, 211, 612
BsoBI CYCGRG 1 cut(s) 428
Bsp1286I GDGCHC 1 cut(s) 103
Bsp143I GATC 4 cut(s) 19, 38, 142, 343
Bsp19I CCATGG 1 cut(s) 456
BspACI CCGC 4 cut(s) 66, 182, 394, 486
BspANI GGCC 3 cut(s) 131, 211, 612
BspCNI CTCAG 2 cut(s) 15, 78
BspLI GGNNCC 5 cut(s) 117, 212, 375, 567, 735
BspMAI CTGCAG 1 cut(s) 790
BspPI GGATC 1 cut(s) 46
BsrFI RCCGGY 1 cut(s) 418
BsrI ACTGG 2 cut(s) 766, 966
BssAI RCCGGY 1 cut(s) 418
BssECI CCNNGG 4 cut(s) 132, 333, 429, 456
BssMI GATC 4 cut(s) 19, 38, 142, 343
BssT1I CCWWGG 2 cut(s) 333, 456
Bst2UI CCWGG 4 cut(s) 203, 227, 614, 687
Bst4CI ACNGT 3 cut(s) 13, 625, 838
BstAPI GCANNNNNTGC 1 cut(s) 920
BstC8I GCNNGC 3 cut(s) 530, 963, 1014
BstDEI CTNAG 4 cut(s) 23, 86, 704, 937
BstDSI CCRYGG 1 cut(s) 456
BstF5I GGATG 4 cut(s) 323, 544, 749, 914
BstKTI GATC 4 cut(s) 22, 41, 145, 346
BstMBI GATC 4 cut(s) 19, 38, 142, 343
BstMCI CGRYCG 3 cut(s) 132, 145, 423
BstMWI GCNNNNNNNGC 7 cut(s) 75, 217, 494, 509, 911, 920, 986
BstNI CCWGG 4 cut(s) 203, 227, 614, 687
BstNSI RCATGY 1 cut(s) 364
BstSCI CCNGG 4 cut(s) 201, 225, 612, 685
BstSFI CTRYAG 2 cut(s) 738, 786
BstV1I GCAGC 1 cut(s) 499
BstV2I GAAGAC 1 cut(s) 740
BstX2I RGATCY 1 cut(s) 19
BstYI RGATCY 1 cut(s) 19
BstZI CGGCCG 1 cut(s) 129
Bsu36I CCTNAGG 1 cut(s) 937
BsuRI GGCC 3 cut(s) 131, 211, 612
BtgI CCRYGG 1 cut(s) 456
BtgZI GCGATG 1 cut(s) 854
BtsCI GGATG 4 cut(s) 323, 544, 749, 914
Cac8I GCNNGC 3 cut(s) 530, 963, 1014
Cfr10I RCCGGY 1 cut(s) 418
Cfr13I GGNCC 4 cut(s) 115, 210, 374, 566
CsiI ACCWGGT 1 cut(s) 225
Csp6I GTAC 5 cut(s) 31, 126, 169, 425, 621
CviAII CATG 5 cut(s) 361, 457, 465, 668, 812
CviQI GTAC 5 cut(s) 31, 126, 169, 425, 621
DdeI CTNAG 4 cut(s) 23, 86, 704, 937
DpnI GATC 4 cut(s) 21, 40, 144, 345
DpnII GATC 4 cut(s) 19, 38, 142, 343
EaeI YGGCCR 2 cut(s) 129, 610
EagI CGGCCG 1 cut(s) 129
EclXI CGGCCG 1 cut(s) 129
Eco130I CCWWGG 2 cut(s) 333, 456
Eco32I GATATC 2 cut(s) 483, 638
Eco47I GGWCC 3 cut(s) 115, 374, 566
Eco52I CGGCCG 1 cut(s) 129
Eco81I CCTNAGG 1 cut(s) 937
Eco88I CYCGRG 1 cut(s) 428
EcoO109I RGGNCCY 3 cut(s) 115, 210, 374
EcoRII CCWGG 4 cut(s) 201, 225, 612, 685
EcoRV GATATC 2 cut(s) 483, 638
EcoT14I CCWWGG 2 cut(s) 333, 456
EcoT22I ATGCAT 2 cut(s) 544, 813
ErhI CCWWGG 2 cut(s) 333, 456
FaeI CATG 5 cut(s) 364, 460, 468, 671, 815
FalI AAGNNNNNCTT 1 cut(s) 1032
FaqI GGGAC 1 cut(s) 579
FatI CATG 5 cut(s) 360, 456, 464, 667, 811
FauI CCCGC 1 cut(s) 401
Fnu4HI GCNGC 2 cut(s) 67, 513
FokI GGATG 4 cut(s) 310, 551, 756, 901
Fsp4HI GCNGC 2 cut(s) 67, 513
FspBI CTAG 2 cut(s) 578, 854
GluI GCNGC 2 cut(s) 67, 513
GsuI CTGGAG 1 cut(s) 185
HaeIII GGCC 3 cut(s) 131, 211, 612
HapII CCGG 4 cut(s) 79, 185, 419, 977
Hin1II CATG 5 cut(s) 364, 460, 468, 671, 815
HincII GTYRAC 1 cut(s) 783
HindII GTYRAC 1 cut(s) 783
HinfI GANTC 4 cut(s) 82, 198, 461, 953
HpaII CCGG 4 cut(s) 79, 185, 419, 977
HphI GGTGA 2 cut(s) 85, 247
Hpy166II GTNNAC 1 cut(s) 783
Hpy188I TCNGA 6 cut(s) 24, 87, 388, 693, 759, 919
Hpy188III TCNNGA 2 cut(s) 401, 440
Hpy8I GTNNAC 1 cut(s) 783
HpyAV CCTTC 5 cut(s) 37, 49, 584, 608, 724
HpyCH4III ACNGT 3 cut(s) 13, 625, 838
HpyF10VI GCNNNNNNNGC 7 cut(s) 75, 217, 494, 509, 911, 920, 986
HpyF3I CTNAG 4 cut(s) 23, 86, 704, 937
Hsp92II CATG 5 cut(s) 364, 460, 468, 671, 815
Kzo9I GATC 4 cut(s) 19, 38, 142, 343
LmnI GCTCC 3 cut(s) 4, 862, 1009
Lsp1109I GCAGC 1 cut(s) 499
LweI GCATC 4 cut(s) 529, 832, 910, 923
MabI ACCWGGT 1 cut(s) 225
MaeI CTAG 2 cut(s) 578, 854
MaeIII GTNAC 4 cut(s) 235, 470, 593, 823
MalI GATC 4 cut(s) 21, 40, 144, 345
MboI GATC 4 cut(s) 19, 38, 142, 343
MboII GAAGA 3 cut(s) 290, 740, 882
MfeI CAATTG 1 cut(s) 215
MflI RGATCY 1 cut(s) 19
MhlI GDGCHC 1 cut(s) 103
MlsI TGGCCA 1 cut(s) 612
MluCI AATT 2 cut(s) 215, 293
MluNI TGGCCA 1 cut(s) 612
MlyI GAGTC 2 cut(s) 91, 192
Mox20I TGGCCA 1 cut(s) 612
Mph1103I ATGCAT 2 cut(s) 544, 813
MscI TGGCCA 1 cut(s) 612
MseI TTAA 3 cut(s) 408, 651, 929
Msp20I TGGCCA 1 cut(s) 612
MspI CCGG 4 cut(s) 79, 185, 419, 977
MspR9I CCNGG 4 cut(s) 203, 227, 614, 687
MunI CAATTG 1 cut(s) 215
Mva1269I GAATGC 2 cut(s) 542, 813
MvaI CCWGG 4 cut(s) 203, 227, 614, 687
MwoI GCNNNNNNNGC 7 cut(s) 75, 217, 494, 509, 911, 920, 986
NcoI CCATGG 1 cut(s) 456
NdeII GATC 4 cut(s) 19, 38, 142, 343
NlaIII CATG 5 cut(s) 364, 460, 468, 671, 815
NlaIV GGNNCC 5 cut(s) 117, 212, 375, 567, 735
NmeAIII GCCGAG 1 cut(s) 157
NmuCI GTSAC 2 cut(s) 235, 593
NsiI ATGCAT 2 cut(s) 544, 813
NspI RCATGY 1 cut(s) 364
PciI ACATGT 1 cut(s) 360
PcsI WCGNNNNNNNCGW 1 cut(s) 352
PctI GAATGC 2 cut(s) 542, 813
PfeI GAWTC 2 cut(s) 461, 953
PfoI TCCNGGA 1 cut(s) 201
PkrI GCNGC 2 cut(s) 68, 514
Ple19I CGATCG 1 cut(s) 145
PleI GAGTC 2 cut(s) 90, 192
PpsI GAGTC 2 cut(s) 90, 192
PpuMI RGGWCCY 2 cut(s) 115, 374
PscI ACATGT 1 cut(s) 360
Psp5II RGGWCCY 2 cut(s) 115, 374
Psp6I CCWGG 4 cut(s) 201, 225, 612, 685
PspGI CCWGG 4 cut(s) 201, 225, 612, 685
PspN4I GGNNCC 5 cut(s) 117, 212, 375, 567, 735
PspPI GGNCC 4 cut(s) 115, 210, 374, 566
PspPPI RGGWCCY 2 cut(s) 115, 374
PstI CTGCAG 1 cut(s) 790
PsuI RGATCY 1 cut(s) 19
PvuI CGATCG 1 cut(s) 145
RsaI GTAC 5 cut(s) 32, 127, 170, 426, 622
RsaNI GTAC 5 cut(s) 31, 126, 169, 425, 621
SaqAI TTAA 3 cut(s) 408, 651, 929
SatI GCNGC 2 cut(s) 67, 513
Sau3AI GATC 4 cut(s) 19, 38, 142, 343
Sau96I GGNCC 4 cut(s) 115, 210, 374, 566
SchI GAGTC 2 cut(s) 91, 192
ScrFI CCNGG 4 cut(s) 203, 227, 614, 687
SduI GDGCHC 1 cut(s) 103
SexAI ACCWGGT 1 cut(s) 225
SfaNI GCATC 4 cut(s) 529, 832, 910, 923
SfcI CTRYAG 2 cut(s) 738, 786
SinI GGWCC 3 cut(s) 115, 374, 566
Sse9I AATT 2 cut(s) 215, 293
SsiI CCGC 4 cut(s) 66, 182, 394, 486
SspMI CTAG 2 cut(s) 578, 854
StyD4I CCNGG 4 cut(s) 201, 225, 612, 685
StyI CCWWGG 2 cut(s) 333, 456
TaaI ACNGT 3 cut(s) 13, 625, 838
TaqI TCGA 4 cut(s) 41, 153, 174, 379
TasI AATT 2 cut(s) 215, 293
TatI WGTACW 1 cut(s) 30
TauI GCSGC 1 cut(s) 69
TfiI GAWTC 2 cut(s) 461, 953
Tru1I TTAA 3 cut(s) 408, 651, 929
Tru9I TTAA 3 cut(s) 408, 651, 929
TseFI GTSAC 2 cut(s) 235, 593
TseI GCWGC 1 cut(s) 512
Tsp45I GTSAC 2 cut(s) 235, 593
TspDTI ATGAA 5 cut(s) 291, 453, 572, 656, 828
TspGWI ACGGA 1 cut(s) 875
VpaK11BI GGWCC 3 cut(s) 115, 374, 566
XceI RCATGY 1 cut(s) 364
XspI CTAG 2 cut(s) 578, 854
Zsp2I ATGCAT 2 cut(s) 544, 813
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.