Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0011590

Physical Location & Seq

Genomic Coordinates Reverse (-)

3317730 .. 3318888

Gene Structure 1159 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G030800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 414 bp

ATGGAGAGACTGTTGAGGTCGCTGGAGAAAGTAGTACCAGACAAAGCTTTTTCAGAGCTCCAAACAGAGGCTGCAGAGCTCAATGAAGAAAGGAAGTTTGCAGTGCTTCCACCAAAACCCTTCTTCAAGAAACCACCTGTACATAAGATTCCCTTTGTAAAGAAGCCATTTCCACCGAAGCCCTCCTTCAAGAAACCACCTCTACGTAAGATTCCCACTGTAAAGAAGCCATTTCCACCCCCAGTTCCAATCTTCAAGAAGCCACTCGCTCCACCAGTTCCAATCTTCAAGATTCCACCCTTTAAGAAGCTGGGTCATCCGCCGGTGCCAGTTGTGGAACGAAAAAATGGGGATCCAGGATATCGGATTCCAGAATATCCGACGAGACCATTTCCCCCTCCTGTTTTCAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0008150 GO:0009664 GO:0009987 GO:0016043 GO:0030312 GO:0044464 GO:0045229 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pollen_Ole_e_I

Protein Analysis

138

Amino Acids

15.7

Weight (kDa)

10.37

Isoelectric Point (pI)

56.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011590)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g02540
malus_domestica	MD02G1292200.v1.1 MD02G1292400.v1.1 MD07G1034400.v1.1
prunus_persica	Prupe.2G030800_v2.0.a1 Prupe.2G031000_v2.0.a1
pyrus_communis	pycom02g24680 pycom02g24690 pycom07g02430
rosa_chinensis	RchiOBHm_Chr1g0321181
rosa_laevigata	RLG00000030433
rosa_multiflora	Rmu_co8413183.1_g000001
rosa_roxburghii	Rroxscaffold_160G00433780 Rroxscaffold_4G00328030
rosa_rugosa	Rorug01G0031800
rosa_samantha	Rh1AG043700 Rh1BG041200 Rh1CG046200 Rh1DG050900
rosa_wichuraiana	Rw1G003840

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	325
AciI	CCGC	1 cut(s)	320
AclWI	GGATC	2 cut(s)	347, 360
AfaI	GTAC	2 cut(s)	36, 141
AfiI	CCNNNNNNNGG	1 cut(s)	67
AgsI	TTSAA	5 cut(s)	127, 190, 256, 289, 409
AjnI	CCWGG	1 cut(s)	355
AluBI	AGCT	4 cut(s)	47, 58, 79, 310
AluI	AGCT	4 cut(s)	47, 58, 79, 310
Alw21I	GWGCWC	2 cut(s)	60, 81
Alw26I	GTCTC	1 cut(s)	379
AlwI	GGATC	2 cut(s)	347, 360
AlwNI	CAGNNNCTG	1 cut(s)	71
ApeKI	GCWGC	1 cut(s)	71
BamHI	GGATCC	1 cut(s)	352
BanI	GGYRCC	1 cut(s)	325
BanII	GRGCYC	2 cut(s)	60, 81
Bbv12I	GWGCWC	2 cut(s)	60, 81
BbvI	GCAGC	1 cut(s)	58
BciT130I	CCWGG	1 cut(s)	357
BcoDI	GTCTC	1 cut(s)	379
BfmI	CTRYAG	1 cut(s)	72
BisI	GCNGC	1 cut(s)	72
BlsI	GCNGC	1 cut(s)	73
Bme1390I	CCNGG	1 cut(s)	357
BmiI	GGNNCC	2 cut(s)	327, 354
BmrFI	CCNGG	1 cut(s)	357
BmrI	ACTGGG	1 cut(s)	236
BmuI	ACTGGG	1 cut(s)	236
BpmI	CTGGAG	1 cut(s)	44
BsaAI	YACGTR	1 cut(s)	206
BsaI	GGTCTC	1 cut(s)	379
BsaXI	ACNNNNNCTCC	1 cut(s)	26
Bsc4I	CCNNNNNNNGG	1 cut(s)	67
Bse118I	RCCGGY	1 cut(s)	322
Bse1I	ACTGG	3 cut(s)	242, 275, 329
BseBI	CCWGG	1 cut(s)	357
BseGI	GGATG	1 cut(s)	316
BseLI	CCNNNNNNNGG	1 cut(s)	67
BseNI	ACTGG	3 cut(s)	242, 275, 329
BseXI	GCAGC	1 cut(s)	58
BseYI	CCCAGC	1 cut(s)	310
BshNI	GGYRCC	1 cut(s)	325
BsiHKAI	GWGCWC	2 cut(s)	60, 81
BsiSI	CCGG	1 cut(s)	323
BslI	CCNNNNNNNGG	1 cut(s)	67
BsmAI	GTCTC	1 cut(s)	379
Bso31I	GGTCTC	1 cut(s)	379
Bsp1286I	GDGCHC	2 cut(s)	60, 81
Bsp1407I	TGTACA	1 cut(s)	139
Bsp143I	GATC	1 cut(s)	352
BspACI	CCGC	1 cut(s)	320
BspLI	GGNNCC	2 cut(s)	327, 354
BspMAI	CTGCAG	1 cut(s)	76
BspPI	GGATC	2 cut(s)	347, 360
BspT107I	GGYRCC	1 cut(s)	325
BspTNI	GGTCTC	1 cut(s)	379
BsrFI	RCCGGY	1 cut(s)	322
BsrGI	TGTACA	1 cut(s)	139
BsrI	ACTGG	3 cut(s)	242, 275, 329
BssAI	RCCGGY	1 cut(s)	322
BssMI	GATC	1 cut(s)	352
Bst2UI	CCWGG	1 cut(s)	357
Bst4CI	ACNGT	2 cut(s)	12, 220
BstAUI	TGTACA	1 cut(s)	139
BstBAI	YACGTR	1 cut(s)	206
BstF5I	GGATG	1 cut(s)	316
BstKTI	GATC	1 cut(s)	355
BstMAI	GTCTC	1 cut(s)	379
BstMBI	GATC	1 cut(s)	352
BstNI	CCWGG	1 cut(s)	357
BstSCI	CCNGG	1 cut(s)	355
BstSFI	CTRYAG	1 cut(s)	72
BstSNI	TACGTA	1 cut(s)	206
BstV1I	GCAGC	1 cut(s)	58
BstX2I	RGATCY	1 cut(s)	352
BstYI	RGATCY	1 cut(s)	352
BtsCI	GGATG	1 cut(s)	316
BtsI	GCAGTG	1 cut(s)	108
BtsIMutI	CAGTG	2 cut(s)	108, 216
CaiI	CAGNNNCTG	1 cut(s)	71
Cfr10I	RCCGGY	1 cut(s)	322
Csp6I	GTAC	2 cut(s)	35, 140
CviJI	RGCY	9 cut(s)	47, 58, 71, 79, 166, 181, 229, 262, 310
CviKI_1	RGCY	9 cut(s)	47, 58, 71, 79, 166, 181, 229, 262, 310
CviQI	GTAC	2 cut(s)	35, 140
DpnI	GATC	1 cut(s)	354
DpnII	GATC	1 cut(s)	352
EciI	GGCGGA	1 cut(s)	309
Ecl136II	GAGCTC	2 cut(s)	58, 79
Eco105I	TACGTA	1 cut(s)	206
Eco24I	GRGCYC	2 cut(s)	60, 81
Eco31I	GGTCTC	1 cut(s)	379
Eco32I	GATATC	1 cut(s)	362
Eco53kI	GAGCTC	2 cut(s)	58, 79
EcoICRI	GAGCTC	2 cut(s)	58, 79
EcoRII	CCWGG	1 cut(s)	355
EcoRV	GATATC	1 cut(s)	362
EcoT38I	GRGCYC	2 cut(s)	60, 81
FaiI	YATR	1 cut(s)	144
FalI	AAGNNNNNCTT	4 cut(s)	137, 169, 170, 202
Fnu4HI	GCNGC	1 cut(s)	72
FokI	GGATG	1 cut(s)	303
FriOI	GRGCYC	2 cut(s)	60, 81
Fsp4HI	GCNGC	1 cut(s)	72
GluI	GCNGC	1 cut(s)	72
GsaI	CCCAGC	1 cut(s)	314
GsuI	CTGGAG	1 cut(s)	44
HapII	CCGG	1 cut(s)	323
HindIII	AAGCTT	1 cut(s)	45
HinfI	GANTC	4 cut(s)	148, 211, 292, 367
HpaII	CCGG	1 cut(s)	323
Hpy188I	TCNGA	3 cut(s)	55, 366, 381
Hpy188III	TCNNGA	5 cut(s)	127, 190, 256, 289, 371
Hpy99I	CGWCG	1 cut(s)	385
HpyAV	CCTTC	2 cut(s)	130, 196
HpyCH4III	ACNGT	2 cut(s)	12, 220
HpyCH4IV	ACGT	1 cut(s)	205
HpyCH4V	TGCA	2 cut(s)	74, 101
HpySE526I	ACGT	1 cut(s)	205
Kzo9I	GATC	1 cut(s)	352
LmnI	GCTCC	2 cut(s)	63, 274
Lsp1109I	GCAGC	1 cut(s)	58
MaeII	ACGT	1 cut(s)	205
MalI	GATC	1 cut(s)	354
MboI	GATC	1 cut(s)	352
MboII	GAAGA	4 cut(s)	98, 115, 244, 277
MflI	RGATCY	1 cut(s)	352
MhlI	GDGCHC	2 cut(s)	60, 81
MmeI	TCCRAC	1 cut(s)	404
MnlI	CCTC	5 cut(s)	9, 61, 193, 210, 408
MseI	TTAA	1 cut(s)	303
MspI	CCGG	1 cut(s)	323
MspR9I	CCNGG	1 cut(s)	357
MvaI	CCWGG	1 cut(s)	357
NdeII	GATC	1 cut(s)	352
NlaIV	GGNNCC	2 cut(s)	327, 354
PfeI	GAWTC	4 cut(s)	148, 211, 292, 367
PfoI	TCCNGGA	1 cut(s)	355
PkrI	GCNGC	1 cut(s)	73
Ppu21I	YACGTR	1 cut(s)	206
Psp124BI	GAGCTC	2 cut(s)	60, 81
Psp6I	CCWGG	1 cut(s)	355
PspFI	CCCAGC	1 cut(s)	310
PspGI	CCWGG	1 cut(s)	355
PspN4I	GGNNCC	2 cut(s)	327, 354
PstI	CTGCAG	1 cut(s)	76
PstNI	CAGNNNCTG	1 cut(s)	71
PsuI	RGATCY	1 cut(s)	352
RsaI	GTAC	2 cut(s)	36, 141
RsaNI	GTAC	2 cut(s)	35, 140
SacI	GAGCTC	2 cut(s)	60, 81
SaqAI	TTAA	1 cut(s)	303
SatI	GCNGC	1 cut(s)	72
Sau3AI	GATC	1 cut(s)	352
ScrFI	CCNGG	1 cut(s)	357
SduI	GDGCHC	2 cut(s)	60, 81
SetI	ASST	8 cut(s)	20, 49, 60, 81, 139, 202, 208, 312
SfcI	CTRYAG	1 cut(s)	72
SgrAI	CRCCGGYG	1 cut(s)	322
SnaBI	TACGTA	1 cut(s)	206
SsiI	CCGC	1 cut(s)	320
SstI	GAGCTC	2 cut(s)	60, 81
StyD4I	CCNGG	1 cut(s)	355
TaaI	ACNGT	2 cut(s)	12, 220
TaiI	ACGT	1 cut(s)	208
TatI	WGTACW	1 cut(s)	139
TfiI	GAWTC	4 cut(s)	148, 211, 292, 367
Tru1I	TTAA	1 cut(s)	303
Tru9I	TTAA	1 cut(s)	303
TscAI	CASTG	2 cut(s)	108, 223
TseI	GCWGC	1 cut(s)	71
TspDTI	ATGAA	1 cut(s)	99
TspRI	CASTG	2 cut(s)	108, 223

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.