Prupe.2G073600_v2.0.a1

Glutaredoxin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0016741
Physical Location & Seq
Reverse (-)
11113877 .. 11115007
1131 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G073600.1

Sequence Viewer

Length: 1131 bp
ATGAAGGGAGTGAAAGGAAAGTTCCTGAAGAAGTTGAAGTCAATCCGGCCTGTTGGGTATTTGAAGCCACAAGATAGAATTCTTCAGGTAAGTGCGTCAGATGGGTATGCAGATTCTTATCCCAAGATCTCAGATCTCAACGTTCAGGCCCAGTTGGTTTCCATGGAAACAGAGCAGAAGAAAATGAAAGAGAACGTTTTGACCGAGCAAGAGCCTGATGTTATTGACGTCGATGAGCTTATGAAAGACCTTGAAGATGAAGAATCAGGGTCTGAGGATGATTTGGACGACAAGGAAAACATCCGGCCAAAAATGAAGGCAAAAAACTCAATGGCATTCAAGGAAAATTTGATGAGAACAGAGCACAATTTGGGGGAAAACAGAGCTCTTGAAGCTTCAGAAGAATCGTTGCCCGGGCCAGATCGTGGTAGACAAATCCCTTTGTCGGAGATTGATATCTCGTCTTTTCGCAGACCGGACTTAAATTCCGGTAGCCTCTTTGACCCGAACCTACTCGCAGCCTTTCAGCAAGCCGTGATGGAATATATGAAGTTGAGTGAAGCAGAGAGAATATCAAGAAGAAGCGAAAAACAGAATCTTGATTCCAATGTAGTTGAGCCAGAGCCGGAGCCGCCTTCAAATGAAGAACCTCTATTATGCTTTGAGGAGAAGTGTGTGCCTGGGAGTTCGGATTCATCAGTAATTCTGTACTCAACAACCCTTCGAGGTATTCGAAAGACCTTCGATGACTGCAACAGCGTTCGGTTTCTTTTGGAGAGCTTTCGGGTGGTGTTTTACGAGCGGGATGTGTCTATGCACATGGAATTCAGAGAAGAGCTGTGGCAAGTTTTGGACTGTAAAGCAGTGCCTCCTAAGCTTTTCATAAAGGGGAGATATATTGGGGGAGCAGAGGAGGTTTTGACGCTTCATGAGCAAGGAAAGCTTAAGCCACTCTTCCATGGAGTCCCGATCGATCGGTCTATTGGCCCGTGTGAAGCTTGTGATGGAGTTCGATTTGTGGTTTGTTTCAAATGCAGTGGCAGCTGCAAAGTGATTGGCCAAGAGGGCCAGTCAGACAAGTGCTCAGTGTGCAATGAAAATGGGTTGATTATATGTCCCTTGTGTTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

377

Amino Acids

42.39

Weight (kDa)

4.96

Isoelectric Point (pI)

51.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016741)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g27780 FvH4_1g27790 FvH4_7g05400
malus_domestica MD02G1258300.v1.1 MD07G1062500.v1.1
prunus_persica Prupe.2G073600_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0332071
rosa_laevigata RLG00000029694
rosa_roxburghii Rroxscaffold_4G00318400
rosa_rugosa Rorug01G0098200
rosa_samantha Rh1AG122100 Rh1BG093500 Rh1CG116700
rosa_wichuraiana Rw1G009950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 231
AccB7I CCANNNNNTGG 1 cut(s) 425
AccBSI CCGCTC 1 cut(s) 802
AccI GTMKAC 1 cut(s) 430
AciI CCGC 2 cut(s) 632, 802
AclI AACGTT 2 cut(s) 141, 195
AcoI YGGCCR 2 cut(s) 305, 1057
AcsI RAATTY 4 cut(s) 78, 346, 484, 824
AcuI CTGAAG 3 cut(s) 47, 68, 381
AcyI GRCGYC 1 cut(s) 228
AfaI GTAC 1 cut(s) 710
AfiI CCNNNNNNNGG 2 cut(s) 425, 445
AflII CTTAAG 1 cut(s) 944
AgsI TTSAA 7 cut(s) 37, 64, 254, 340, 392, 639, 1030
AjnI CCWGG 1 cut(s) 679
AluBI AGCT 9 cut(s) 238, 386, 395, 780, 838, 877, 943, 998, 1044
AluI AGCT 9 cut(s) 238, 386, 395, 780, 838, 877, 943, 998, 1044
Alw21I GWGCWC 3 cut(s) 366, 388, 1085
AlwNI CAGNNNCTG 1 cut(s) 272
Ama87I CYCGRG 1 cut(s) 413
AoxI GGCC 7 cut(s) 47, 147, 305, 416, 985, 1057, 1066
ApeKI GCWGC 3 cut(s) 518, 1041, 1044
ApoI RAATTY 4 cut(s) 78, 346, 484, 824
AspS9I GGNCC 4 cut(s) 148, 416, 986, 1066
AsuC2I CCSGG 2 cut(s) 414, 415
AsuII TTCGAA 1 cut(s) 733
AvaI CYCGRG 1 cut(s) 413
BalI TGGCCA 1 cut(s) 1059
BanII GRGCYC 1 cut(s) 388
Bbv12I GWGCWC 3 cut(s) 366, 388, 1085
BbvI GCAGC 3 cut(s) 530, 1031, 1053
BccI CCATC 3 cut(s) 95, 532, 998
BceAI ACGGC 1 cut(s) 518
BciT130I CCWGG 1 cut(s) 681
BcnI CCSGG 2 cut(s) 414, 415
BfrI CTTAAG 1 cut(s) 944
BglI GCCNNNNNGGC 1 cut(s) 1065
BglII AGATCT 2 cut(s) 126, 133
BisI GCNGC 4 cut(s) 519, 632, 1042, 1045
BlsI GCNGC 4 cut(s) 520, 633, 1043, 1046
Bme1390I CCNGG 3 cut(s) 414, 415, 681
BmeT110I CYCGRG 1 cut(s) 413
BmgT120I GGNCC 4 cut(s) 148, 416, 986, 1066
BmiI GGNNCC 1 cut(s) 630
BmrFI CCNGG 3 cut(s) 414, 415, 681
BmrI ACTGGG 1 cut(s) 145
BmuI ACTGGG 1 cut(s) 145
Bpu10I CCTNAGC 1 cut(s) 873
Bpu14I TTCGAA 1 cut(s) 733
BpuMI CCSGG 2 cut(s) 414, 415
Bsa29I ATCGAT 1 cut(s) 972
BsaBI GATNNNNATC 2 cut(s) 117, 455
BsaHI GRCGYC 1 cut(s) 228
BsaJI CCNNGG 4 cut(s) 162, 413, 680, 958
BsaWI WCCGGW 2 cut(s) 475, 488
Bsc4I CCNNNNNNNGG 2 cut(s) 425, 445
Bse1I ACTGG 2 cut(s) 151, 1069
Bse3DI GCAATG 1 cut(s) 1099
Bse8I GATNNNNATC 2 cut(s) 117, 455
BseBI CCWGG 1 cut(s) 681
BseCI ATCGAT 1 cut(s) 972
BseDI CCNNGG 4 cut(s) 162, 413, 680, 958
BseGI GGATG 3 cut(s) 283, 300, 811
BseJI GATNNNNATC 2 cut(s) 117, 455
BseLI CCNNNNNNNGG 2 cut(s) 425, 445
BseMI GCAATG 1 cut(s) 1099
BseMII CTCAG 3 cut(s) 144, 264, 1098
BseNI ACTGG 2 cut(s) 151, 1069
BseRI GAGGAG 2 cut(s) 680, 926
BseXI GCAGC 3 cut(s) 530, 1031, 1053
Bsh1285I CGRYCG 2 cut(s) 972, 976
BshFI GGCC 7 cut(s) 49, 149, 307, 418, 987, 1059, 1068
BshVI ATCGAT 1 cut(s) 972
BsiEI CGRYCG 2 cut(s) 972, 976
BsiHKAI GWGCWC 3 cut(s) 366, 388, 1085
BsiHKCI CYCGRG 1 cut(s) 413
BsiSI CCGG 6 cut(s) 46, 304, 414, 476, 489, 626
BslFI GGGAC 2 cut(s) 950, 1101
BslI CCNNNNNNNGG 2 cut(s) 425, 445
BsmFI GGGAC 2 cut(s) 950, 1101
BsmI GAATGC 1 cut(s) 335
BsnI GGCC 7 cut(s) 49, 149, 307, 418, 987, 1059, 1068
BsoBI CYCGRG 1 cut(s) 413
Bsp119I TTCGAA 1 cut(s) 733
Bsp1286I GDGCHC 3 cut(s) 366, 388, 1085
Bsp143I GATC 5 cut(s) 126, 133, 421, 969, 973
Bsp19I CCATGG 2 cut(s) 162, 958
BspACI CCGC 2 cut(s) 632, 802
BspANI GGCC 7 cut(s) 49, 149, 307, 418, 987, 1059, 1068
BspCNI CTCAG 3 cut(s) 143, 265, 1097
BspDI ATCGAT 1 cut(s) 972
BspHI TCATGA 1 cut(s) 928
BspLI GGNNCC 1 cut(s) 630
BspQI GCTCTTC 1 cut(s) 828
BspT104I TTCGAA 1 cut(s) 733
BspTI CTTAAG 1 cut(s) 944
BsrBI CCGCTC 1 cut(s) 802
BsrDI GCAATG 1 cut(s) 1099
BsrI ACTGG 2 cut(s) 151, 1069
BssECI CCNNGG 4 cut(s) 162, 413, 680, 958
BssMI GATC 5 cut(s) 126, 133, 421, 969, 973
BssNI GRCGYC 1 cut(s) 228
BssT1I CCWWGG 2 cut(s) 162, 958
Bst2UI CCWGG 1 cut(s) 681
Bst4CI ACNGT 1 cut(s) 857
Bst6I CTCTTC 2 cut(s) 828, 959
BstACI GRCGYC 1 cut(s) 228
BstAFI CTTAAG 1 cut(s) 944
BstBI TTCGAA 1 cut(s) 733
BstC8I GCNNGC 1 cut(s) 531
BstDEI CTNAG 4 cut(s) 130, 273, 873, 1084
BstDSI CCRYGG 2 cut(s) 162, 958
BstF5I GGATG 3 cut(s) 283, 300, 811
BstKTI GATC 5 cut(s) 129, 136, 424, 972, 976
BstMBI GATC 5 cut(s) 126, 133, 421, 969, 973
BstMCI CGRYCG 2 cut(s) 972, 976
BstMWI GCNNNNNNNGC 8 cut(s) 392, 631, 874, 931, 940, 1041, 1065, 1089
BstNI CCWGG 1 cut(s) 681
BstSCI CCNGG 3 cut(s) 412, 413, 679
BstV1I GCAGC 3 cut(s) 530, 1031, 1053
BstX2I RGATCY 2 cut(s) 126, 133
BstYI RGATCY 2 cut(s) 126, 133
Bsu15I ATCGAT 1 cut(s) 972
BsuRI GGCC 7 cut(s) 49, 149, 307, 418, 987, 1059, 1068
BsuTUI ATCGAT 1 cut(s) 972
BtgI CCRYGG 2 cut(s) 162, 958
BtsCI GGATG 3 cut(s) 283, 300, 811
BtsI GCAGTG 2 cut(s) 870, 1042
BtsIMutI CAGTG 3 cut(s) 870, 1042, 1092
Cac8I GCNNGC 1 cut(s) 531
CaiI CAGNNNCTG 1 cut(s) 272
CciI TCATGA 1 cut(s) 928
Cfr13I GGNCC 4 cut(s) 148, 416, 986, 1066
Cfr9I CCCGGG 1 cut(s) 413
ClaI ATCGAT 1 cut(s) 972
CseI GACGC 2 cut(s) 84, 931
Csp6I GTAC 1 cut(s) 709
CspCI CAANNNNNGTGG 2 cut(s) 1018, 1053
CviAII CATG 4 cut(s) 163, 820, 929, 959
CviQI GTAC 1 cut(s) 709
DdeI CTNAG 4 cut(s) 130, 273, 873, 1084
DpnI GATC 5 cut(s) 128, 135, 423, 971, 975
DpnII GATC 5 cut(s) 126, 133, 421, 969, 973
EaeI YGGCCR 2 cut(s) 305, 1057
Eam1104I CTCTTC 2 cut(s) 828, 959
EarI CTCTTC 2 cut(s) 828, 959
Ecl136II GAGCTC 1 cut(s) 386
Eco130I CCWWGG 2 cut(s) 162, 958
Eco24I GRGCYC 1 cut(s) 388
Eco32I GATATC 1 cut(s) 457
Eco53kI GAGCTC 1 cut(s) 386
Eco57I CTGAAG 3 cut(s) 47, 68, 381
Eco88I CYCGRG 1 cut(s) 413
EcoICRI GAGCTC 1 cut(s) 386
EcoRI GAATTC 2 cut(s) 78, 824
EcoRII CCWGG 1 cut(s) 679
EcoRV GATATC 1 cut(s) 457
EcoT14I CCWWGG 2 cut(s) 162, 958
EcoT38I GRGCYC 1 cut(s) 388
ErhI CCWWGG 2 cut(s) 162, 958
FaeI CATG 4 cut(s) 166, 823, 932, 962
FalI AAGNNNNNCTT 4 cut(s) 927, 959, 938, 970
FaqI GGGAC 2 cut(s) 950, 1101
FatI CATG 4 cut(s) 162, 819, 928, 958
FauI CCCGC 1 cut(s) 795
FblI GTMKAC 1 cut(s) 430
Fnu4HI GCNGC 4 cut(s) 519, 632, 1042, 1045
FokI GGATG 3 cut(s) 287, 290, 818
FriOI GRGCYC 1 cut(s) 388
Fsp4HI GCNGC 4 cut(s) 519, 632, 1042, 1045
GluI GCNGC 4 cut(s) 519, 632, 1042, 1045
HaeIII GGCC 7 cut(s) 49, 149, 307, 418, 987, 1059, 1068
HapII CCGG 6 cut(s) 46, 304, 414, 476, 489, 626
HgaI GACGC 2 cut(s) 84, 931
Hin1I GRCGYC 1 cut(s) 228
Hin1II CATG 4 cut(s) 166, 823, 932, 962
HindIII AAGCTT 4 cut(s) 393, 875, 941, 996
HinfI GANTC 7 cut(s) 113, 263, 404, 595, 602, 692, 963
HpaII CCGG 6 cut(s) 46, 304, 414, 476, 489, 626
Hpy166II GTNNAC 1 cut(s) 431
Hpy188I TCNGA 8 cut(s) 100, 133, 274, 400, 448, 691, 830, 1075
Hpy188III TCNNGA 6 cut(s) 25, 389, 576, 599, 929, 967
Hpy8I GTNNAC 1 cut(s) 431
Hpy99I CGWCG 1 cut(s) 233
HpyAV CCTTC 4 cut(s) 310, 645, 731, 751
HpyCH4III ACNGT 1 cut(s) 857
HpyCH4IV ACGT 3 cut(s) 141, 195, 228
HpyCH4V TGCA 6 cut(s) 110, 753, 817, 1035, 1047, 1092
HpyF10VI GCNNNNNNNGC 8 cut(s) 392, 631, 874, 931, 940, 1041, 1065, 1089
HpyF3I CTNAG 4 cut(s) 130, 273, 873, 1084
HpySE526I ACGT 3 cut(s) 141, 195, 228
Hsp92I GRCGYC 1 cut(s) 228
Hsp92II CATG 4 cut(s) 166, 823, 932, 962
Kzo9I GATC 5 cut(s) 126, 133, 421, 969, 973
LguI GCTCTTC 1 cut(s) 828
LmnI GCTCC 2 cut(s) 628, 905
Lsp1109I GCAGC 3 cut(s) 530, 1031, 1053
MaeII ACGT 3 cut(s) 141, 195, 228
MalI GATC 5 cut(s) 128, 135, 423, 971, 975
MbiI CCGCTC 1 cut(s) 802
MboI GATC 5 cut(s) 126, 133, 421, 969, 973
MflI RGATCY 2 cut(s) 126, 133
MhlI GDGCHC 3 cut(s) 366, 388, 1085
MlsI TGGCCA 1 cut(s) 1059
MluCI AATT 6 cut(s) 78, 346, 367, 484, 702, 824
MluNI TGGCCA 1 cut(s) 1059
MlyI GAGTC 1 cut(s) 972
MmeI TCCRAC 1 cut(s) 426
MnlI CCTC 9 cut(s) 268, 506, 658, 660, 719, 879, 904, 907, 1057
Mox20I TGGCCA 1 cut(s) 1059
MscI TGGCCA 1 cut(s) 1059
MseI TTAA 2 cut(s) 482, 945
Msp20I TGGCCA 1 cut(s) 1059
MspA1I CMGCKG 1 cut(s) 1044
MspCI CTTAAG 1 cut(s) 944
MspI CCGG 6 cut(s) 46, 304, 414, 476, 489, 626
MspR9I CCNGG 3 cut(s) 414, 415, 681
Mva1269I GAATGC 1 cut(s) 335
MvaI CCWGG 1 cut(s) 681
MwoI GCNNNNNNNGC 8 cut(s) 392, 631, 874, 931, 940, 1041, 1065, 1089
NciI CCSGG 2 cut(s) 414, 415
NcoI CCATGG 2 cut(s) 162, 958
NdeII GATC 5 cut(s) 126, 133, 421, 969, 973
NlaIII CATG 4 cut(s) 166, 823, 932, 962
NlaIV GGNNCC 1 cut(s) 630
NspV TTCGAA 1 cut(s) 733
PagI TCATGA 1 cut(s) 928
PciSI GCTCTTC 1 cut(s) 828
PcsI WCGNNNNNNNCGW 2 cut(s) 201, 730
PctI GAATGC 1 cut(s) 335
PfeI GAWTC 6 cut(s) 113, 263, 404, 595, 602, 692
PflMI CCANNNNNTGG 1 cut(s) 425
PkrI GCNGC 4 cut(s) 520, 633, 1043, 1046
Ple19I CGATCG 2 cut(s) 972, 976
PleI GAGTC 1 cut(s) 971
PpsI GAGTC 1 cut(s) 971
Psp124BI GAGCTC 1 cut(s) 388
Psp1406I AACGTT 2 cut(s) 141, 195
Psp6I CCWGG 1 cut(s) 679
PspGI CCWGG 1 cut(s) 679
PspN4I GGNNCC 1 cut(s) 630
PspPI GGNCC 4 cut(s) 148, 416, 986, 1066
PstNI CAGNNNCTG 1 cut(s) 272
PsuI RGATCY 2 cut(s) 126, 133
PvuI CGATCG 2 cut(s) 972, 976
PvuII CAGCTG 1 cut(s) 1044
RsaI GTAC 1 cut(s) 710
RsaNI GTAC 1 cut(s) 709
SacI GAGCTC 1 cut(s) 388
SapI GCTCTTC 1 cut(s) 828
SaqAI TTAA 2 cut(s) 482, 945
SatI GCNGC 4 cut(s) 519, 632, 1042, 1045
Sau3AI GATC 5 cut(s) 126, 133, 421, 969, 973
Sau96I GGNCC 4 cut(s) 148, 416, 986, 1066
SchI GAGTC 1 cut(s) 972
ScrFI CCNGG 3 cut(s) 414, 415, 681
SduI GDGCHC 3 cut(s) 366, 388, 1085
SfiI GGCCNNNNNGGCC 1 cut(s) 1065
SfuI TTCGAA 1 cut(s) 733
SmaI CCCGGG 1 cut(s) 415
SmlI CTYRAG 1 cut(s) 944
SmoI CTYRAG 1 cut(s) 944
SrfI GCCCGGGC 1 cut(s) 415
Sse9I AATT 6 cut(s) 78, 346, 367, 484, 702, 824
SsiI CCGC 2 cut(s) 632, 802
SstI GAGCTC 1 cut(s) 388
StyD4I CCNGG 3 cut(s) 412, 413, 679
StyI CCWWGG 2 cut(s) 162, 958
TaaI ACNGT 1 cut(s) 857
TaiI ACGT 3 cut(s) 144, 198, 231
TaqI TCGA 6 cut(s) 231, 724, 733, 744, 972, 1012
TaqII GACCGA 2 cut(s) 218, 966
TasI AATT 6 cut(s) 78, 346, 367, 484, 702, 824
TatI WGTACW 1 cut(s) 708
TauI GCSGC 1 cut(s) 634
TfiI GAWTC 6 cut(s) 113, 263, 404, 595, 602, 692
Tru1I TTAA 2 cut(s) 482, 945
Tru9I TTAA 2 cut(s) 482, 945
TscAI CASTG 3 cut(s) 870, 1042, 1092
TseI GCWGC 3 cut(s) 518, 1041, 1044
TspMI CCCGGG 1 cut(s) 413
TspRI CASTG 3 cut(s) 870, 1042, 1092
Van91I CCANNNNNTGG 1 cut(s) 425
Vha464I CTTAAG 1 cut(s) 944
XapI RAATTY 4 cut(s) 78, 346, 484, 824
XmaI CCCGGG 1 cut(s) 413
XmiI GTMKAC 1 cut(s) 430
ZraI GACGTC 1 cut(s) 229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.