Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002535

Physical Location & Seq

Genomic Coordinates Forward (+)

11126405 .. 11135019

Gene Structure 8615 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G073700.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1080 bp

ATGAGTCATCGTCCCCACAGCATCCTCCTCGGCACCACCATACGCACCCATCGCTCCATTCCACCCCACCTAATTTCCAGGGCTTGGTTTTGTAGCGGTAGTTTCAGAAACCAGACCCACATGGAAAGCCATGCTTCTTGTGAGGCGGTTGTGGCTGACTCTGAGCTCTTGGTTAAAAAAATGGCTGCTATTTGTAATGCCGGTCCCGCCAAACTCCAGGTTGGAAATTTATGCTCAAATTTTGTGTGTTGTGTTTTAAATAACAACAAAGTAATAGCAGATTTTGATGGCACACTAACAAAGTACTGGGTCAATGGTTGTCGGGGACAAAGCAGTCATGGTCTTTTGCAACAGGAGAATCCGGAATATGATAAGAAAAGGCAGGAATTATATGAACATTATCATCCGTTAGAATTCTCCCCGACAATTCCAATTGAAGAGAAAACTAAGCTTATGGAAGAATGGTGGACAAAAACTCATGGTCTCTTAATTGAGGGAGGCCTTACCTATGATGGAATAAGGCAATCTGTCGCTGACTCCACAATTGCTTTTAGGGAGGGTGTTGTTGAACTATTTGAGTTTTTGGAGGAAAGAGACATTCCCATTCTTATATTTTCTGCTGGACTTGCTGATATCATAGAGGAGGTCCTTAGGCAGAAGATTCACAGACTTTTCAAAAATGTGAAGATAGTCTCAAATCGGATGGTATTCGATAATAATGGTCACCTTGTATCTTTTCAAGGGAAGACAATTCATAGTCTGAATAAAAATGAGCATGCTCTGGATATGGCTGCTCCCCTTCATGATCGATTAGGTGATAATATAGATGCGACTACTTATGAGAATGCCTCAGTCAAGACTAGAAGAAATGTGCTGCTTCTGGGTGATCACATTGGTGACCTGGGAATGTCTGATGGCTTGAACTATGAGAATAGAATTTCCGTGGGATTTCTGAATGACAATGTTGAGAATTCTCTTGATAGCTACCGCAAAACCTTTGACATTGTTTACTTGAATGATGCACCCATGTGGGGAGTTGTAAAGCTTGTTTCACAACTCTGTCCAAGTGAAGGTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko00760 ko01100 ko01110 map00230 map00240 map00760 map01100 map01110

Pfam Domains

Protein Families

UMPH-1

Protein Analysis

360

Amino Acids

40.5

Weight (kDa)

6.01

Isoelectric Point (pI)

42.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002535)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38680
fragaria_vesca	FvH4_1g27810 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460
malus_domestica	MD07G1062700.v1.1
prunus_persica	Prupe.2G073700_v2.0.a1 Prupe.2G073700_v2.0.a1 Prupe.2G073700_v2.0.a1 Prupe.2G073700_v2.0.a1 Prupe.2G074100_v2.0.a1 Prupe.2G074100_v2.0.a1 Prupe.2G074100_v2.0.a1 Prupe.2G074100_v2.0.a1 Prupe.2G074100_v2.0.a1 Prupe.2G074100_v2.0.a1
pyrus_communis	pycom07g04800
rosa_chinensis	RchiOBHm_Chr1g0332191
rosa_laevigata	RLG00000029689
rosa_multiflora	Rmu_sc0000733.1_g000018
rosa_roxburghii	Rroxscaffold_4G00318380
rosa_rugosa	Rorug01G0098400 Rorug01G0098500 Rorug01G0098500
rosa_samantha	Rh1AG122400 Rh1BG093700 Rh1CG117000 Rh1DG128000
rosa_wichuraiana	Rw1G009980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	333
AccB1I	GGYRCC	1 cut(s)	32
AccB7I	CCANNNNNTGG	1 cut(s)	84
AccIII	TCCGGA	1 cut(s)	361
AciI	CCGC	4 cut(s)	96, 146, 207, 988
AcsI	RAATTY	5 cut(s)	226, 238, 413, 936, 970
AfaI	GTAC	1 cut(s)	305
AfiI	CCNNNNNNNGG	3 cut(s)	84, 1031, 1070
AgsI	TTSAA	6 cut(s)	437, 569, 676, 740, 922, 1015
AjnI	CCWGG	3 cut(s)	77, 216, 900
AleI	CACNNNNGTG	2 cut(s)	894, 1027
AluBI	AGCT	4 cut(s)	166, 451, 984, 1045
AluI	AGCT	4 cut(s)	166, 451, 984, 1045
Alw21I	GWGCWC	1 cut(s)	168
Alw26I	GTCTC	3 cut(s)	488, 588, 697
Aor13HI	TCCGGA	1 cut(s)	361
AoxI	GGCC	1 cut(s)	499
ApeKI	GCWGC	3 cut(s)	185, 791, 874
ApoI	RAATTY	5 cut(s)	226, 238, 413, 936, 970
AspS9I	GGNCC	2 cut(s)	203, 646
AsuHPI	GGTGA	4 cut(s)	716, 827, 896, 908
AvaII	GGWCC	2 cut(s)	203, 646
AxyI	CCTNAGG	1 cut(s)	650
BanI	GGYRCC	1 cut(s)	32
BanII	GRGCYC	1 cut(s)	168
BbsI	GAAGAC	1 cut(s)	752
Bbv12I	GWGCWC	1 cut(s)	168
BbvI	GCAGC	3 cut(s)	172, 778, 861
BccI	CCATC	5 cut(s)	57, 281, 506, 697, 908
BcgI	CGANNNNNNTGC	2 cut(s)	10, 44
BciT130I	CCWGG	3 cut(s)	79, 218, 902
BclI	TGATCA	1 cut(s)	886
BcoDI	GTCTC	3 cut(s)	488, 588, 697
BfaI	CTAG	1 cut(s)	861
BisI	GCNGC	3 cut(s)	186, 792, 875
BlsI	GCNGC	3 cut(s)	187, 793, 876
BmcAI	AGTACT	1 cut(s)	305
Bme1390I	CCNGG	3 cut(s)	79, 218, 902
Bme18I	GGWCC	2 cut(s)	203, 646
BmgT120I	GGNCC	2 cut(s)	203, 646
BmiI	GGNNCC	2 cut(s)	34, 205
BmrFI	CCNGG	3 cut(s)	79, 218, 902
BmrI	ACTGGG	1 cut(s)	316
BmsI	GCATC	3 cut(s)	30, 817, 1009
BmuI	ACTGGG	1 cut(s)	316
BpiI	GAAGAC	1 cut(s)	752
BplI	GAGNNNNNCTC	2 cut(s)	833, 865
BpmI	CTGGAG	1 cut(s)	200
Bsa29I	ATCGAT	1 cut(s)	808
BsaI	GGTCTC	1 cut(s)	488
BsaJI	CCNNGG	4 cut(s)	28, 78, 901, 942
BsaWI	WCCGGW	1 cut(s)	361
Bsc4I	CCNNNNNNNGG	3 cut(s)	84, 1031, 1070
Bse118I	RCCGGY	1 cut(s)	200
Bse1I	ACTGG	1 cut(s)	311
Bse21I	CCTNAGG	1 cut(s)	650
BseAI	TCCGGA	1 cut(s)	361
BseBI	CCWGG	3 cut(s)	79, 218, 902
BseCI	ATCGAT	1 cut(s)	808
BseDI	CCNNGG	4 cut(s)	28, 78, 901, 942
BseGI	GGATG	3 cut(s)	21, 403, 708
BseLI	CCNNNNNNNGG	3 cut(s)	84, 1031, 1070
BseMII	CTCAG	2 cut(s)	153, 864
BseNI	ACTGG	1 cut(s)	311
BseRI	GAGGAG	2 cut(s)	17, 656
BseXI	GCAGC	3 cut(s)	172, 778, 861
BshFI	GGCC	1 cut(s)	501
BshNI	GGYRCC	1 cut(s)	32
BshVI	ATCGAT	1 cut(s)	808
BsiHKAI	GWGCWC	1 cut(s)	168
BsiSI	CCGG	2 cut(s)	201, 362
BslFI	GGGAC	2 cut(s)	189, 339
BslI	CCNNNNNNNGG	3 cut(s)	84, 1031, 1070
BsmAI	GTCTC	3 cut(s)	488, 588, 697
BsmFI	GGGAC	2 cut(s)	189, 339
BsmI	GAATGC	1 cut(s)	850
BsnI	GGCC	1 cut(s)	501
Bso31I	GGTCTC	1 cut(s)	488
Bsp1286I	GDGCHC	1 cut(s)	168
Bsp13I	TCCGGA	1 cut(s)	361
Bsp143I	GATC	2 cut(s)	805, 886
BspACI	CCGC	4 cut(s)	96, 146, 207, 988
BspANI	GGCC	1 cut(s)	501
BspCNI	CTCAG	2 cut(s)	154, 863
BspDI	ATCGAT	1 cut(s)	808
BspEI	TCCGGA	1 cut(s)	361
BspHI	TCATGA	1 cut(s)	802
BspLI	GGNNCC	2 cut(s)	34, 205
BspT107I	GGYRCC	1 cut(s)	32
BspTNI	GGTCTC	1 cut(s)	488
BsrFI	RCCGGY	1 cut(s)	200
BsrI	ACTGG	1 cut(s)	311
BssAI	RCCGGY	1 cut(s)	200
BssECI	CCNNGG	4 cut(s)	28, 78, 901, 942
BssMI	GATC	2 cut(s)	805, 886
Bst2UI	CCWGG	3 cut(s)	79, 218, 902
Bst6I	CTCTTC	1 cut(s)	432
BstC8I	GCNNGC	1 cut(s)	777
BstDEI	CTNAG	4 cut(s)	162, 447, 650, 850
BstDSI	CCRYGG	1 cut(s)	942
BstEII	GGTNACC	2 cut(s)	722, 896
BstF5I	GGATG	3 cut(s)	21, 403, 708
BstKTI	GATC	2 cut(s)	808, 889
BstMAI	GTCTC	3 cut(s)	488, 588, 697
BstMBI	GATC	2 cut(s)	805, 886
BstMWI	GCNNNNNNNGC	4 cut(s)	51, 152, 206, 626
BstNI	CCWGG	3 cut(s)	79, 218, 902
BstNSI	RCATGY	1 cut(s)	779
BstPI	GGTNACC	2 cut(s)	722, 896
BstSCI	CCNGG	3 cut(s)	77, 216, 900
BstV1I	GCAGC	3 cut(s)	172, 778, 861
BstV2I	GAAGAC	1 cut(s)	752
Bsu15I	ATCGAT	1 cut(s)	808
Bsu36I	CCTNAGG	1 cut(s)	650
BsuRI	GGCC	1 cut(s)	501
BsuTUI	ATCGAT	1 cut(s)	808
BtgI	CCRYGG	1 cut(s)	942
BtgZI	GCGATG	1 cut(s)	35
BtsCI	GGATG	3 cut(s)	21, 403, 708
Cac8I	GCNNGC	1 cut(s)	777
CciI	TCATGA	1 cut(s)	802
Cfr10I	RCCGGY	1 cut(s)	200
Cfr13I	GGNCC	2 cut(s)	203, 646
ClaI	ATCGAT	1 cut(s)	808
Csp6I	GTAC	1 cut(s)	304
CviAII	CATG	7 cut(s)	121, 131, 338, 479, 776, 803, 1027
CviQI	GTAC	1 cut(s)	304
DdeI	CTNAG	4 cut(s)	162, 447, 650, 850
DpnI	GATC	2 cut(s)	807, 888
DpnII	GATC	2 cut(s)	805, 886
DraI	TTTAAA	1 cut(s)	258
DrdI	GACNNNNNNGTC	1 cut(s)	333
DseDI	GACNNNNNNGTC	1 cut(s)	333
Eam1104I	CTCTTC	1 cut(s)	432
EarI	CTCTTC	1 cut(s)	432
Ecl136II	GAGCTC	1 cut(s)	166
Eco147I	AGGCCT	1 cut(s)	501
Eco24I	GRGCYC	1 cut(s)	168
Eco31I	GGTCTC	1 cut(s)	488
Eco32I	GATATC	1 cut(s)	634
Eco47I	GGWCC	2 cut(s)	203, 646
Eco53kI	GAGCTC	1 cut(s)	166
Eco81I	CCTNAGG	1 cut(s)	650
Eco91I	GGTNACC	2 cut(s)	722, 896
EcoICRI	GAGCTC	1 cut(s)	166
EcoO109I	RGGNCCY	1 cut(s)	646
EcoO65I	GGTNACC	2 cut(s)	722, 896
EcoRI	GAATTC	2 cut(s)	413, 970
EcoRII	CCWGG	3 cut(s)	77, 216, 900
EcoRV	GATATC	1 cut(s)	634
EcoT38I	GRGCYC	1 cut(s)	168
FaeI	CATG	7 cut(s)	124, 134, 341, 482, 779, 806, 1030
FalI	AAGNNNNNCTT	2 cut(s)	118, 150
FaqI	GGGAC	2 cut(s)	189, 339
FatI	CATG	7 cut(s)	120, 130, 337, 478, 775, 802, 1026
FauI	CCCGC	1 cut(s)	214
FbaI	TGATCA	1 cut(s)	886
Fnu4HI	GCNGC	3 cut(s)	186, 792, 875
FokI	GGATG	3 cut(s)	8, 390, 715
FriOI	GRGCYC	1 cut(s)	168
Fsp4HI	GCNGC	3 cut(s)	186, 792, 875
FspBI	CTAG	1 cut(s)	861
GluI	GCNGC	3 cut(s)	186, 792, 875
GsuI	CTGGAG	1 cut(s)	200
HaeIII	GGCC	1 cut(s)	501
HapII	CCGG	2 cut(s)	201, 362
Hin1II	CATG	7 cut(s)	124, 134, 341, 482, 779, 806, 1030
HindIII	AAGCTT	2 cut(s)	449, 1043
HinfI	GANTC	5 cut(s)	4, 158, 358, 536, 661
HpaII	CCGG	2 cut(s)	201, 362
HphI	GGTGA	4 cut(s)	716, 827, 896, 908
Hpy166II	GTNNAC	2 cut(s)	468, 1009
Hpy188I	TCNGA	6 cut(s)	107, 163, 702, 762, 913, 954
Hpy188III	TCNNGA	5 cut(s)	362, 782, 803, 856, 977
Hpy8I	GTNNAC	2 cut(s)	468, 1009
HpyAV	CCTTC	2 cut(s)	809, 1064
HpyCH4V	TGCA	2 cut(s)	349, 1022
HpyF10VI	GCNNNNNNNGC	4 cut(s)	51, 152, 206, 626
HpyF3I	CTNAG	4 cut(s)	162, 447, 650, 850
Hsp92II	CATG	7 cut(s)	124, 134, 341, 482, 779, 806, 1030
Kpn2I	TCCGGA	1 cut(s)	361
Ksp22I	TGATCA	1 cut(s)	886
Kzo9I	GATC	2 cut(s)	805, 886
LmnI	GCTCC	2 cut(s)	59, 799
Lsp1109I	GCAGC	3 cut(s)	172, 778, 861
LweI	GCATC	3 cut(s)	30, 817, 1009
MaeI	CTAG	1 cut(s)	861
MaeIII	GTNAC	2 cut(s)	722, 896
MalI	GATC	2 cut(s)	807, 888
MboI	GATC	2 cut(s)	805, 886
MboII	GAAGA	6 cut(s)	449, 470, 670, 697, 757, 876
MfeI	CAATTG	2 cut(s)	432, 543
MhlI	GDGCHC	1 cut(s)	168
MlyI	GAGTC	3 cut(s)	13, 152, 530
MmeI	TCCRAC	1 cut(s)	202
MroI	TCCGGA	1 cut(s)	361
MseI	TTAA	3 cut(s)	174, 257, 488
MslI	CAYNNNNRTG	2 cut(s)	894, 1027
MspI	CCGG	2 cut(s)	201, 362
MspR9I	CCNGG	3 cut(s)	79, 218, 902
MunI	CAATTG	2 cut(s)	432, 543
Mva1269I	GAATGC	1 cut(s)	850
MvaI	CCWGG	3 cut(s)	79, 218, 902
MwoI	GCNNNNNNNGC	4 cut(s)	51, 152, 206, 626
NdeII	GATC	2 cut(s)	805, 886
NlaIII	CATG	7 cut(s)	124, 134, 341, 482, 779, 806, 1030
NlaIV	GGNNCC	2 cut(s)	34, 205
NmeAIII	GCCGAG	1 cut(s)	9
NmuCI	GTSAC	2 cut(s)	722, 896
NspI	RCATGY	1 cut(s)	779
OliI	CACNNNNGTG	2 cut(s)	894, 1027
PaeI	GCATGC	1 cut(s)	779
PagI	TCATGA	1 cut(s)	802
PceI	AGGCCT	1 cut(s)	501
PctI	GAATGC	1 cut(s)	850
PfeI	GAWTC	2 cut(s)	358, 661
PflMI	CCANNNNNTGG	1 cut(s)	84
PkrI	GCNGC	3 cut(s)	187, 793, 876
PleI	GAGTC	3 cut(s)	12, 152, 530
PpsI	GAGTC	3 cut(s)	12, 152, 530
PpuMI	RGGWCCY	1 cut(s)	646
Psp124BI	GAGCTC	1 cut(s)	168
Psp5II	RGGWCCY	1 cut(s)	646
Psp6I	CCWGG	3 cut(s)	77, 216, 900
PspEI	GGTNACC	2 cut(s)	722, 896
PspGI	CCWGG	3 cut(s)	77, 216, 900
PspN4I	GGNNCC	2 cut(s)	34, 205
PspPI	GGNCC	2 cut(s)	203, 646
PspPPI	RGGWCCY	1 cut(s)	646
RsaI	GTAC	1 cut(s)	305
RsaNI	GTAC	1 cut(s)	304
RseI	CAYNNNNRTG	2 cut(s)	894, 1027
SacI	GAGCTC	1 cut(s)	168
SaqAI	TTAA	3 cut(s)	174, 257, 488
SatI	GCNGC	3 cut(s)	186, 792, 875
Sau3AI	GATC	2 cut(s)	805, 886
Sau96I	GGNCC	2 cut(s)	203, 646
ScaI	AGTACT	1 cut(s)	305
SchI	GAGTC	3 cut(s)	13, 152, 530
ScrFI	CCNGG	3 cut(s)	79, 218, 902
SduI	GDGCHC	1 cut(s)	168
SfaNI	GCATC	3 cut(s)	30, 817, 1009
SinI	GGWCC	2 cut(s)	203, 646
SmiMI	CAYNNNNRTG	2 cut(s)	894, 1027
SphI	GCATGC	1 cut(s)	779
SseBI	AGGCCT	1 cut(s)	501
SsiI	CCGC	4 cut(s)	96, 146, 207, 988
SspMI	CTAG	1 cut(s)	861
SstI	GAGCTC	1 cut(s)	168
StuI	AGGCCT	1 cut(s)	501
StyD4I	CCNGG	3 cut(s)	77, 216, 900
TaqI	TCGA	2 cut(s)	711, 808
TatI	WGTACW	1 cut(s)	303
TfiI	GAWTC	2 cut(s)	358, 661
Tru1I	TTAA	3 cut(s)	174, 257, 488
Tru9I	TTAA	3 cut(s)	174, 257, 488
TseFI	GTSAC	2 cut(s)	722, 896
TseI	GCWGC	3 cut(s)	185, 791, 874
Tsp45I	GTSAC	2 cut(s)	722, 896
TspDTI	ATGAA	3 cut(s)	408, 743, 791
TspGWI	ACGGA	2 cut(s)	396, 931
Van91I	CCANNNNNTGG	1 cut(s)	84
VpaK11BI	GGWCC	2 cut(s)	203, 646
XapI	RAATTY	5 cut(s)	226, 238, 413, 936, 970
XceI	RCATGY	1 cut(s)	779
XspI	CTAG	1 cut(s)	861
ZrmI	AGTACT	1 cut(s)	305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.