Rmu_sc0000733.1_g000018

5'-nucleotidase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000733.1
Physical Location & Seq
Reverse (-)
92337 .. 98719
6383 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000733.1_g000018.1.cds

Sequence Viewer

Length: 1320 bp
atgagtaatcgcctcctcttcgttggcaccaccatttgctctaatcgctgcttcatcccacaccacttcacttccaggacctgcttttgtagtggtaccttgagaaatcagactaacatggaatccgatgaggttgtggtggtggctcaccctcaccttttggataccaaaattgctgctattcggaatgcgggtccccccaaactccaggttatagcagattttgatgccacactcacaaagtacagagtgaatggttctcggggacaaagcagtcatggccttttgcaacaggagaatcctgaatataataacaaaaggcgggagctattcgaatactatcatccattagagttctcgccagctattccaattgaacaaaaaactaagcttatggaggaatggtggggaaagactcattctcttttgattgagggaggccttacctatgatgggataaggcaatccgttgctgattccacaattgcttttagggagggtgttgttgaattatttgagtttttagagaaaagagacattcctgttcttatattttcagcaggacttgcagatatcatagaggaggtcctgaggcagaaagttcacagattgtttaaaaatgtgaagatcgtctccaataggatggtatttgatgataacagccaccttgtatcgtttaaagggaagacgattcatagtctaaataaaaatgagcacgctcttgatatggctgctccacttcatgagcaattaggtgatttagatgggccaacttatgagaatgcgtcagtcaagacaagaagaaatgtcattcttctgggcgatcatattggtgacctgggaatgtctgatggtttgaactatgagaatagaatttccgtgggatttctgaatgacaatgttgagaattctattgatagctaccgcgaagcctttgacgtcgtttacctgaatgatgcacccatgtggggagtagtaaagcttgtttcacaactatgtcctggagatgctccaaaagaaagcccaaactccaggtccagcaggttgctacagcaagcccaaacctatctccaaacgcgaagtggccgtatagcacctccgccgcgtcgacccacatcctcgccggctagaaccccgcgtcccacacctgcctacgttgtcgcgcaatcctacagccaccaagtcgacgccggatcagccaaaaaacctcgccgccgcatagcccccacgaaccttatcgccgctcagtccattcgacccacgcagccgctcaagccatccctgcacaacccaaccaccacgcatagagcctacatctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

439

Amino Acids

49.3

Weight (kDa)

8.94

Isoelectric Point (pI)

48.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1156
AasI GACNNNNNNGTC 1 cut(s) 273
AatII GACGTC 1 cut(s) 942
Acc36I ACCTGC 3 cut(s) 89, 1032, 1156
Acc65I GGTACC 1 cut(s) 95
AccB1I GGYRCC 2 cut(s) 26, 95
AccBSI CCGCTC 2 cut(s) 1244, 1270
AccI GTMKAC 2 cut(s) 1108, 1185
AccII CGCG 5 cut(s) 927, 1078, 1105, 1138, 1163
AclWI GGATC 1 cut(s) 1201
AcoI YGGCCR 1 cut(s) 1084
AcsI RAATTY 2 cut(s) 873, 907
AcyI GRCGYC 2 cut(s) 939, 1188
AfaI GTAC 2 cut(s) 97, 245
AfiI CCNNNNNNNGG 2 cut(s) 453, 968
AgsI TTSAA 3 cut(s) 377, 509, 859
AjnI CCWGG 5 cut(s) 74, 207, 837, 1000, 1031
AleI CACNNNNGTG 1 cut(s) 964
AloI GAACNNNNNNTCC 2 cut(s) 1123, 1155
AluBI AGCT 5 cut(s) 328, 365, 391, 921, 982
AluI AGCT 5 cut(s) 328, 365, 391, 921, 982
Alw21I GWGCWC 1 cut(s) 717
Alw26I GTCTC 2 cut(s) 528, 637
AlwI GGATC 1 cut(s) 1201
AlwNI CAGNNNCTG 1 cut(s) 81
Ama87I CYCGRG 1 cut(s) 261
AoxI GGCC 4 cut(s) 280, 439, 767, 1084
ApeKI GCWGC 4 cut(s) 48, 176, 731, 1264
ApoI RAATTY 2 cut(s) 873, 907
ArsI GACNNNNNNTTYG 2 cut(s) 1019, 1051
Asp718I GGTACC 1 cut(s) 95
AspLEI GCGC 1 cut(s) 1165
AspS9I GGNCC 5 cut(s) 78, 194, 586, 767, 1035
AsuHPI GGTGA 4 cut(s) 140, 146, 767, 845
AsuII TTCGAA 1 cut(s) 333
AvaI CYCGRG 1 cut(s) 261
AvaII GGWCC 4 cut(s) 78, 194, 586, 1035
AxyI CCTNAGG 1 cut(s) 590
BanI GGYRCC 2 cut(s) 26, 95
BbsI GAAGAC 1 cut(s) 692
Bbv12I GWGCWC 1 cut(s) 717
BbvI GCAGC 4 cut(s) 35, 163, 718, 1276
BccI CCATC 5 cut(s) 446, 637, 758, 845, 1285
BceAI ACGGC 1 cut(s) 1071
BciT130I CCWGG 5 cut(s) 76, 209, 839, 1002, 1033
BciVI GTATCC 1 cut(s) 157
BcoDI GTCTC 2 cut(s) 528, 637
BfaI CTAG 1 cut(s) 1128
BfmI CTRYAG 2 cut(s) 1049, 1171
BfuAI ACCTGC 3 cut(s) 89, 1032, 1156
BfuI GTATCC 1 cut(s) 157
BisI GCNGC 9 cut(s) 49, 177, 732, 1103, 1213, 1216, 1242, 1265, 1268
BlsI GCNGC 9 cut(s) 50, 178, 733, 1104, 1214, 1217, 1243, 1266, 1269
Bme1390I CCNGG 5 cut(s) 76, 209, 839, 1002, 1033
Bme18I GGWCC 4 cut(s) 78, 194, 586, 1035
BmeT110I CYCGRG 1 cut(s) 261
BmgT120I GGNCC 5 cut(s) 78, 194, 586, 767, 1035
BmiI GGNNCC 4 cut(s) 28, 97, 195, 196
BmrFI CCNGG 5 cut(s) 76, 209, 839, 1002, 1033
BmsI GCATC 3 cut(s) 217, 946, 997
BpiI GAAGAC 1 cut(s) 692
BpmI CTGGAG 3 cut(s) 191, 1015, 1023
Bpu14I TTCGAA 1 cut(s) 333
BpuEI CTTGAG 2 cut(s) 121, 1256
BsaHI GRCGYC 2 cut(s) 939, 1188
BsaJI CCNNGG 2 cut(s) 838, 879
BsaXI ACNNNNNCTCC 2 cut(s) 389, 419
Bsc4I CCNNNNNNNGG 2 cut(s) 453, 968
Bse118I RCCGGY 1 cut(s) 1123
Bse21I CCTNAGG 1 cut(s) 590
BseBI CCWGG 5 cut(s) 76, 209, 839, 1002, 1033
BseDI CCNNGG 2 cut(s) 838, 879
BseGI GGATG 5 cut(s) 54, 343, 648, 1115, 1277
BseLI CCNNNNNNNGG 2 cut(s) 453, 968
BseMII CTCAG 2 cut(s) 581, 1259
BseRI GAGGAG 2 cut(s) 5, 596
BseXI GCAGC 4 cut(s) 35, 163, 718, 1276
BsgI GTGCAG 1 cut(s) 1268
Bsh1236I CGCG 5 cut(s) 927, 1078, 1105, 1138, 1163
BshFI GGCC 4 cut(s) 282, 441, 769, 1086
BshNI GGYRCC 2 cut(s) 26, 95
BsiHKAI GWGCWC 1 cut(s) 717
BsiHKCI CYCGRG 1 cut(s) 261
BsiSI CCGG 2 cut(s) 1124, 1191
BslFI GGGAC 3 cut(s) 180, 279, 1125
BslI CCNNNNNNNGG 2 cut(s) 453, 968
BsmAI GTCTC 2 cut(s) 528, 637
BsmBI CGTCTC 1 cut(s) 637
BsmFI GGGAC 3 cut(s) 180, 279, 1125
BsmI GAATGC 2 cut(s) 193, 787
BsnI GGCC 4 cut(s) 282, 441, 769, 1086
BsoBI CYCGRG 1 cut(s) 261
Bsp119I TTCGAA 1 cut(s) 333
Bsp1286I GDGCHC 1 cut(s) 717
Bsp143I GATC 3 cut(s) 627, 823, 1193
BspANI GGCC 4 cut(s) 282, 441, 769, 1086
BspCNI CTCAG 2 cut(s) 582, 1258
BspFNI CGCG 5 cut(s) 927, 1078, 1105, 1138, 1163
BspHI TCATGA 1 cut(s) 742
BspLI GGNNCC 4 cut(s) 28, 97, 195, 196
BspMI ACCTGC 3 cut(s) 89, 1032, 1156
BspPI GGATC 1 cut(s) 1201
BspT104I TTCGAA 1 cut(s) 333
BspT107I GGYRCC 2 cut(s) 26, 95
BsrBI CCGCTC 2 cut(s) 1244, 1270
BsrFI RCCGGY 1 cut(s) 1123
BssAI RCCGGY 1 cut(s) 1123
BssECI CCNNGG 2 cut(s) 838, 879
BssMI GATC 3 cut(s) 627, 823, 1193
BssNI GRCGYC 2 cut(s) 939, 1188
Bst2UI CCWGG 5 cut(s) 76, 209, 839, 1002, 1033
Bst6I CTCTTC 1 cut(s) 23
BstACI GRCGYC 2 cut(s) 939, 1188
BstAPI GCANNNNNTGC 1 cut(s) 566
BstBI TTCGAA 1 cut(s) 333
BstC8I GCNNGC 4 cut(s) 363, 717, 1056, 1125
BstDEI CTNAG 3 cut(s) 387, 590, 1245
BstDSI CCRYGG 1 cut(s) 879
BstEII GGTNACC 1 cut(s) 833
BstF5I GGATG 5 cut(s) 54, 343, 648, 1115, 1277
BstFNI CGCG 5 cut(s) 927, 1078, 1105, 1138, 1163
BstHHI GCGC 1 cut(s) 1165
BstKTI GATC 3 cut(s) 630, 826, 1196
BstMAI GTCTC 2 cut(s) 528, 637
BstMBI GATC 3 cut(s) 627, 823, 1193
BstMWI GCNNNNNNNGC 6 cut(s) 45, 279, 566, 1196, 1273, 1282
BstNI CCWGG 5 cut(s) 76, 209, 839, 1002, 1033
BstPI GGTNACC 1 cut(s) 833
BstSCI CCNGG 5 cut(s) 74, 207, 837, 1000, 1031
BstSFI CTRYAG 2 cut(s) 1049, 1171
BstUI CGCG 5 cut(s) 927, 1078, 1105, 1138, 1163
BstV1I GCAGC 4 cut(s) 35, 163, 718, 1276
BstV2I GAAGAC 1 cut(s) 692
BstXI CCANNNNNNTGG 1 cut(s) 643
Bsu36I CCTNAGG 1 cut(s) 590
BsuI GTATCC 1 cut(s) 157
BsuRI GGCC 4 cut(s) 282, 441, 769, 1086
BtgI CCRYGG 1 cut(s) 879
BtsCI GGATG 5 cut(s) 54, 343, 648, 1115, 1277
BveI ACCTGC 3 cut(s) 89, 1032, 1156
Cac8I GCNNGC 4 cut(s) 363, 717, 1056, 1125
CaiI CAGNNNCTG 1 cut(s) 81
CciI TCATGA 1 cut(s) 742
CfoI GCGC 1 cut(s) 1165
Cfr10I RCCGGY 1 cut(s) 1123
Cfr13I GGNCC 5 cut(s) 78, 194, 586, 767, 1035
CseI GACGC 4 cut(s) 774, 1094, 1127, 1196
Csp6I GTAC 2 cut(s) 96, 244
CviAII CATG 4 cut(s) 118, 278, 743, 964
CviQI GTAC 2 cut(s) 96, 244
DdeI CTNAG 3 cut(s) 387, 590, 1245
DpnI GATC 3 cut(s) 629, 825, 1195
DpnII GATC 3 cut(s) 627, 823, 1193
DraI TTTAAA 2 cut(s) 616, 679
DrdI GACNNNNNNGTC 1 cut(s) 273
DseDI GACNNNNNNGTC 1 cut(s) 273
EaeI YGGCCR 1 cut(s) 1084
Eam1104I CTCTTC 1 cut(s) 23
EarI CTCTTC 1 cut(s) 23
EciI GGCGGA 1 cut(s) 1089
Eco147I AGGCCT 1 cut(s) 441
Eco32I GATATC 1 cut(s) 574
Eco47I GGWCC 4 cut(s) 78, 194, 586, 1035
Eco81I CCTNAGG 1 cut(s) 590
Eco88I CYCGRG 1 cut(s) 261
Eco91I GGTNACC 1 cut(s) 833
EcoO109I RGGNCCY 3 cut(s) 78, 194, 586
EcoO65I GGTNACC 1 cut(s) 833
EcoRI GAATTC 1 cut(s) 907
EcoRII CCWGG 5 cut(s) 74, 207, 837, 1000, 1031
EcoRV GATATC 1 cut(s) 574
Esp3I CGTCTC 1 cut(s) 637
FaeI CATG 4 cut(s) 121, 281, 746, 967
FaqI GGGAC 3 cut(s) 180, 279, 1125
FatI CATG 4 cut(s) 117, 277, 742, 963
FauI CCCGC 3 cut(s) 184, 315, 1143
FblI GTMKAC 2 cut(s) 1108, 1185
Fnu4HI GCNGC 9 cut(s) 49, 177, 732, 1103, 1213, 1216, 1242, 1265, 1268
FokI GGATG 5 cut(s) 41, 330, 655, 1102, 1264
Fsp4HI GCNGC 9 cut(s) 49, 177, 732, 1103, 1213, 1216, 1242, 1265, 1268
FspBI CTAG 1 cut(s) 1128
GlaI GCGC 1 cut(s) 1164
GluI GCNGC 9 cut(s) 49, 177, 732, 1103, 1213, 1216, 1242, 1265, 1268
GsuI CTGGAG 3 cut(s) 191, 1015, 1023
HaeIII GGCC 4 cut(s) 282, 441, 769, 1086
HapII CCGG 2 cut(s) 1124, 1191
HgaI GACGC 4 cut(s) 774, 1094, 1127, 1196
HhaI GCGC 1 cut(s) 1165
Hin1I GRCGYC 2 cut(s) 939, 1188
Hin1II CATG 4 cut(s) 121, 281, 746, 967
Hin6I GCGC 1 cut(s) 1163
HinP1I GCGC 1 cut(s) 1163
HincII GTYRAC 2 cut(s) 1109, 1186
HindII GTYRAC 2 cut(s) 1109, 1186
HindIII AAGCTT 2 cut(s) 389, 980
HinfI GANTC 5 cut(s) 122, 298, 415, 476, 691
HpaII CCGG 2 cut(s) 1124, 1191
HphI GGTGA 4 cut(s) 140, 146, 767, 845
Hpy166II GTNNAC 4 cut(s) 604, 946, 1109, 1186
Hpy188I TCNGA 6 cut(s) 111, 127, 186, 850, 891, 1319
Hpy188III TCNNGA 5 cut(s) 302, 589, 722, 743, 793
Hpy8I GTNNAC 4 cut(s) 604, 946, 1109, 1186
Hpy99I CGWCG 3 cut(s) 944, 1110, 1190
HpyCH4IV ACGT 2 cut(s) 939, 1155
HpyCH4V TGCA 4 cut(s) 289, 569, 959, 1285
HpyF10VI GCNNNNNNNGC 6 cut(s) 45, 279, 566, 1196, 1273, 1282
HpyF3I CTNAG 3 cut(s) 387, 590, 1245
HpySE526I ACGT 2 cut(s) 939, 1155
Hsp92I GRCGYC 2 cut(s) 939, 1188
Hsp92II CATG 4 cut(s) 121, 281, 746, 967
HspAI GCGC 1 cut(s) 1163
KflI GGGWCCC 1 cut(s) 194
KpnI GGTACC 1 cut(s) 99
KroI GCCGGC 1 cut(s) 1123
KroNI GCCGGC 1 cut(s) 1125
Kzo9I GATC 3 cut(s) 627, 823, 1193
LmnI GCTCC 3 cut(s) 325, 739, 1015
Lsp1109I GCAGC 4 cut(s) 35, 163, 718, 1276
LweI GCATC 3 cut(s) 217, 946, 997
MaeI CTAG 1 cut(s) 1128
MaeII ACGT 2 cut(s) 939, 1155
MaeIII GTNAC 1 cut(s) 833
MalI GATC 3 cut(s) 629, 825, 1195
MbiI CCGCTC 2 cut(s) 1244, 1270
MboI GATC 3 cut(s) 627, 823, 1193
MboII GAAGA 5 cut(s) 10, 637, 697, 806, 813
MfeI CAATTG 2 cut(s) 372, 483
MhlI GDGCHC 1 cut(s) 717
MluCI AATT 7 cut(s) 171, 372, 483, 509, 749, 873, 907
MlyI GAGTC 1 cut(s) 409
MroNI GCCGGC 1 cut(s) 1123
MseI TTAA 2 cut(s) 615, 678
MslI CAYNNNNRTG 3 cut(s) 831, 964, 994
MspI CCGG 2 cut(s) 1124, 1191
MspR9I CCNGG 5 cut(s) 76, 209, 839, 1002, 1033
MunI CAATTG 2 cut(s) 372, 483
Mva1269I GAATGC 2 cut(s) 193, 787
MvaI CCWGG 5 cut(s) 76, 209, 839, 1002, 1033
MvnI CGCG 5 cut(s) 927, 1078, 1105, 1138, 1163
MwoI GCNNNNNNNGC 6 cut(s) 45, 279, 566, 1196, 1273, 1282
NaeI GCCGGC 1 cut(s) 1125
NdeII GATC 3 cut(s) 627, 823, 1193
NgoMIV GCCGGC 1 cut(s) 1123
NlaIII CATG 4 cut(s) 121, 281, 746, 967
NlaIV GGNNCC 4 cut(s) 28, 97, 195, 196
NmuCI GTSAC 1 cut(s) 833
NspV TTCGAA 1 cut(s) 333
OliI CACNNNNGTG 1 cut(s) 964
PagI TCATGA 1 cut(s) 742
PaqCI CACCTGC 1 cut(s) 1156
PceI AGGCCT 1 cut(s) 441
PctI GAATGC 2 cut(s) 193, 787
PdiI GCCGGC 1 cut(s) 1125
PfeI GAWTC 4 cut(s) 122, 298, 476, 691
PfoI TCCNGGA 2 cut(s) 74, 1000
PkrI GCNGC 9 cut(s) 50, 178, 733, 1104, 1214, 1217, 1243, 1266, 1269
PleI GAGTC 1 cut(s) 409
PpsI GAGTC 1 cut(s) 409
PpuMI RGGWCCY 3 cut(s) 78, 194, 586
Psp5II RGGWCCY 3 cut(s) 78, 194, 586
Psp6I CCWGG 5 cut(s) 74, 207, 837, 1000, 1031
PspEI GGTNACC 1 cut(s) 833
PspGI CCWGG 5 cut(s) 74, 207, 837, 1000, 1031
PspN4I GGNNCC 4 cut(s) 28, 97, 195, 196
PspPI GGNCC 5 cut(s) 78, 194, 586, 767, 1035
PspPPI RGGWCCY 3 cut(s) 78, 194, 586
PstNI CAGNNNCTG 1 cut(s) 81
RsaI GTAC 2 cut(s) 97, 245
RsaNI GTAC 2 cut(s) 96, 244
RseI CAYNNNNRTG 3 cut(s) 831, 964, 994
SalI GTCGAC 2 cut(s) 1107, 1184
SaqAI TTAA 2 cut(s) 615, 678
SatI GCNGC 9 cut(s) 49, 177, 732, 1103, 1213, 1216, 1242, 1265, 1268
Sau3AI GATC 3 cut(s) 627, 823, 1193
Sau96I GGNCC 5 cut(s) 78, 194, 586, 767, 1035
SchI GAGTC 1 cut(s) 409
ScrFI CCNGG 5 cut(s) 76, 209, 839, 1002, 1033
SduI GDGCHC 1 cut(s) 717
SfaNI GCATC 3 cut(s) 217, 946, 997
SfcI CTRYAG 2 cut(s) 1049, 1171
SfuI TTCGAA 1 cut(s) 333
SinI GGWCC 4 cut(s) 78, 194, 586, 1035
SmiMI CAYNNNNRTG 3 cut(s) 831, 964, 994
SmlI CTYRAG 2 cut(s) 100, 1271
SmoI CTYRAG 2 cut(s) 100, 1271
Sse9I AATT 7 cut(s) 171, 372, 483, 509, 749, 873, 907
SseBI AGGCCT 1 cut(s) 441
SspMI CTAG 1 cut(s) 1128
StuI AGGCCT 1 cut(s) 441
StyD4I CCNGG 5 cut(s) 74, 207, 837, 1000, 1031
TaiI ACGT 2 cut(s) 942, 1158
TaqI TCGA 4 cut(s) 333, 1108, 1185, 1255
TasI AATT 7 cut(s) 171, 372, 483, 509, 749, 873, 907
TatI WGTACW 1 cut(s) 243
TauI GCSGC 5 cut(s) 1105, 1215, 1218, 1244, 1270
TfiI GAWTC 4 cut(s) 122, 298, 476, 691
Tru1I TTAA 2 cut(s) 615, 678
Tru9I TTAA 2 cut(s) 615, 678
TseFI GTSAC 1 cut(s) 833
TseI GCWGC 4 cut(s) 48, 176, 731, 1264
Tsp45I GTSAC 1 cut(s) 833
TspDTI ATGAA 3 cut(s) 43, 683, 731
TspGWI ACGGA 2 cut(s) 457, 868
VpaK11BI GGWCC 4 cut(s) 78, 194, 586, 1035
XapI RAATTY 2 cut(s) 873, 907
XcmI CCANNNNNNNNNTGG 1 cut(s) 1079
XmiI GTMKAC 2 cut(s) 1108, 1185
XspI CTAG 1 cut(s) 1128
ZraI GACGTC 1 cut(s) 940
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.