Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002535

Physical Location & Seq

Genomic Coordinates Forward (+)

11226468 .. 11233033

Gene Structure 6566 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G074100.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1029 bp

ATGAGTTATCGTCTCCACAGCATCCTCCTCGGCACCACCATACGCACCCATCGCTCCATTCCACCCCACCTAATTTGCAGGGCTTGGTTTTGTAGCGGTAGATTCAGAAACCAGACCCACATGGAAAGCCATGCTTCTTGTGAGGCCGTTGTGGGTGACTCTGAGCTCTTGGTTAAAAAAATGGCTACTATTTGTAATGCCGGTCCCGCCAAACTCCAGGTAATAGCAGATTTTGATGCCACACTAACAAAGTACCAGGTCAATGGTTGTCGGGGACAAAGCAGTCATGGTCTTGTGCAACAGGAGGATACGGAATATGATAAGAAAAGGCAGGAATTATATGAACATTATCATCCGTTAGAATTCTCCCCAACAATTCCAATTGAAGAGAAAGCTAAGCTTATGGAAGAATGGTGGACAAAAACTCATGGTCTCTTAATTGAGGGAGGCCTTACCTATGATGGAATAAGGCAATCTGTCGCTGACTCCACAATTGCTTTTAGGGAGGGTGTTGTTGAACTATTTGAGTTTTTGGAGGAAAGAGACATTCCCATTCTTATATTTTCTGCTGGACTTGCTGATATCATAGAGGAGGTCCTTAGGCAGAAGATTCACAGACTTTTCAAAAATGTGAAGATAGTCTCAAATCGGATGGTATTCGATAATAACGGTCACCTTGTATCTTTTCAAGGGAAGACGATTCATAGTCTGAATAAAAATGAGCACGCTCTGGATATGGCTGCTCCCCTTCACGATCGATTAGGTGATAATATAGATGCGCCTACTTATGAGAATGCCTCGGTCAAGACGAGAAGAAATGTGCTGCTTCTGGGTGATCACATTGGTGACCTGGGAATGTCTGATGGCTTGAACTATGAGAACAGAATTTCTGCGGGATTTCTGAATGACAATGTTGAGAATTCTCTTGATAGCTACCGCAAAGCCTTTGACGTTGTTTACCTGAATGATGCACCCATGTGGGGAGTTGTAAAGCTTGTTTCACAACTCTGTCCAAGTGAGGGTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko00760 ko01100 ko01110 map00230 map00240 map00760 map01100 map01110

Pfam Domains

Protein Families

UMPH-1

Protein Analysis

343

Amino Acids

38.66

Weight (kDa)

5.88

Isoelectric Point (pI)

43.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002535)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38680
fragaria_vesca	FvH4_1g27810 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460 FvH4_7g05460
malus_domestica	MD07G1062700.v1.1
prunus_persica	Prupe.2G073700_v2.0.a1 Prupe.2G073700_v2.0.a1 Prupe.2G073700_v2.0.a1 Prupe.2G073700_v2.0.a1 Prupe.2G074100_v2.0.a1 Prupe.2G074100_v2.0.a1 Prupe.2G074100_v2.0.a1 Prupe.2G074100_v2.0.a1 Prupe.2G074100_v2.0.a1 Prupe.2G074100_v2.0.a1
pyrus_communis	pycom07g04800
rosa_chinensis	RchiOBHm_Chr1g0332191
rosa_laevigata	RLG00000029689
rosa_multiflora	Rmu_sc0000733.1_g000018
rosa_roxburghii	Rroxscaffold_4G00318380
rosa_rugosa	Rorug01G0098400 Rorug01G0098500 Rorug01G0098500
rosa_samantha	Rh1AG122400 Rh1BG093700 Rh1CG117000 Rh1DG128000
rosa_wichuraiana	Rw1G009980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	282
AccB1I	GGYRCC	1 cut(s)	32
AciI	CCGC	4 cut(s)	96, 207, 893, 937
AcsI	RAATTY	3 cut(s)	362, 885, 919
AfaI	GTAC	1 cut(s)	254
AfiI	CCNNNNNNNGG	2 cut(s)	980, 1019
AgsI	TTSAA	5 cut(s)	386, 518, 625, 689, 871
AjnI	CCWGG	3 cut(s)	216, 255, 849
AleI	CACNNNNGTG	2 cut(s)	843, 976
AluBI	AGCT	5 cut(s)	166, 395, 400, 933, 994
AluI	AGCT	5 cut(s)	166, 395, 400, 933, 994
Alw21I	GWGCWC	2 cut(s)	168, 726
Alw26I	GTCTC	4 cut(s)	17, 437, 537, 646
AoxI	GGCC	2 cut(s)	144, 448
ApeKI	GCWGC	2 cut(s)	740, 823
ApoI	RAATTY	3 cut(s)	362, 885, 919
AspLEI	GCGC	1 cut(s)	781
AspS9I	GGNCC	2 cut(s)	203, 595
AsuHPI	GGTGA	5 cut(s)	167, 665, 776, 845, 857
AvaII	GGWCC	2 cut(s)	203, 595
AxyI	CCTNAGG	1 cut(s)	599
BanI	GGYRCC	1 cut(s)	32
BanII	GRGCYC	1 cut(s)	168
BbsI	GAAGAC	1 cut(s)	701
Bbv12I	GWGCWC	2 cut(s)	168, 726
BbvI	GCAGC	2 cut(s)	727, 810
BccI	CCATC	4 cut(s)	57, 455, 646, 857
BceAI	ACGGC	1 cut(s)	131
BcgI	CGANNNNNNTGC	2 cut(s)	10, 44
BciT130I	CCWGG	3 cut(s)	218, 257, 851
BciVI	GTATCC	1 cut(s)	301
BclI	TGATCA	1 cut(s)	835
BcoDI	GTCTC	4 cut(s)	17, 437, 537, 646
BfuI	GTATCC	1 cut(s)	301
BisI	GCNGC	2 cut(s)	741, 824
BlpI	GCTNAGC	1 cut(s)	396
BlsI	GCNGC	2 cut(s)	742, 825
Bme1390I	CCNGG	3 cut(s)	218, 257, 851
Bme18I	GGWCC	2 cut(s)	203, 595
BmgT120I	GGNCC	2 cut(s)	203, 595
BmiI	GGNNCC	2 cut(s)	34, 205
BmrFI	CCNGG	3 cut(s)	218, 257, 851
BmsI	GCATC	4 cut(s)	30, 226, 766, 958
BpiI	GAAGAC	1 cut(s)	701
BplI	GAGNNNNNCTC	2 cut(s)	782, 814
BpmI	CTGGAG	1 cut(s)	200
Bpu1102I	GCTNAGC	1 cut(s)	396
Bsa29I	ATCGAT	1 cut(s)	757
BsaI	GGTCTC	1 cut(s)	437
BsaJI	CCNNGG	3 cut(s)	28, 798, 850
Bsc4I	CCNNNNNNNGG	2 cut(s)	980, 1019
Bse118I	RCCGGY	1 cut(s)	200
Bse21I	CCTNAGG	1 cut(s)	599
BseBI	CCWGG	3 cut(s)	218, 257, 851
BseCI	ATCGAT	1 cut(s)	757
BseDI	CCNNGG	3 cut(s)	28, 798, 850
BseGI	GGATG	3 cut(s)	21, 352, 657
BseLI	CCNNNNNNNGG	2 cut(s)	980, 1019
BseMII	CTCAG	1 cut(s)	153
BseRI	GAGGAG	2 cut(s)	17, 605
BseXI	GCAGC	2 cut(s)	727, 810
Bsh1285I	CGRYCG	1 cut(s)	757
BshFI	GGCC	2 cut(s)	146, 450
BshNI	GGYRCC	1 cut(s)	32
BshVI	ATCGAT	1 cut(s)	757
BsiEI	CGRYCG	1 cut(s)	757
BsiHKAI	GWGCWC	2 cut(s)	168, 726
BsiSI	CCGG	1 cut(s)	201
BslFI	GGGAC	2 cut(s)	189, 288
BslI	CCNNNNNNNGG	2 cut(s)	980, 1019
BsmAI	GTCTC	4 cut(s)	17, 437, 537, 646
BsmBI	CGTCTC	1 cut(s)	17
BsmFI	GGGAC	2 cut(s)	189, 288
BsmI	GAATGC	1 cut(s)	799
BsnI	GGCC	2 cut(s)	146, 450
Bso31I	GGTCTC	1 cut(s)	437
Bsp1286I	GDGCHC	2 cut(s)	168, 726
Bsp143I	GATC	2 cut(s)	754, 835
Bsp1720I	GCTNAGC	1 cut(s)	396
BspACI	CCGC	4 cut(s)	96, 207, 893, 937
BspANI	GGCC	2 cut(s)	146, 450
BspCNI	CTCAG	1 cut(s)	154
BspDI	ATCGAT	1 cut(s)	757
BspLI	GGNNCC	2 cut(s)	34, 205
BspT107I	GGYRCC	1 cut(s)	32
BspTNI	GGTCTC	1 cut(s)	437
BsrFI	RCCGGY	1 cut(s)	200
BssAI	RCCGGY	1 cut(s)	200
BssECI	CCNNGG	3 cut(s)	28, 798, 850
BssMI	GATC	2 cut(s)	754, 835
Bst2UI	CCWGG	3 cut(s)	218, 257, 851
Bst4CI	ACNGT	1 cut(s)	671
Bst6I	CTCTTC	1 cut(s)	381
BstC8I	GCNNGC	1 cut(s)	726
BstDEI	CTNAG	3 cut(s)	162, 396, 599
BstEII	GGTNACC	2 cut(s)	671, 845
BstF5I	GGATG	3 cut(s)	21, 352, 657
BstHHI	GCGC	1 cut(s)	781
BstKTI	GATC	2 cut(s)	757, 838
BstMAI	GTCTC	4 cut(s)	17, 437, 537, 646
BstMBI	GATC	2 cut(s)	754, 835
BstMCI	CGRYCG	1 cut(s)	757
BstMWI	GCNNNNNNNGC	3 cut(s)	51, 206, 575
BstNI	CCWGG	3 cut(s)	218, 257, 851
BstPI	GGTNACC	2 cut(s)	671, 845
BstSCI	CCNGG	3 cut(s)	216, 255, 849
BstV1I	GCAGC	2 cut(s)	727, 810
BstV2I	GAAGAC	1 cut(s)	701
BstXI	CCANNNNNNTGG	1 cut(s)	263
Bsu15I	ATCGAT	1 cut(s)	757
Bsu36I	CCTNAGG	1 cut(s)	599
BsuI	GTATCC	1 cut(s)	301
BsuRI	GGCC	2 cut(s)	146, 450
BsuTUI	ATCGAT	1 cut(s)	757
BtgZI	GCGATG	1 cut(s)	35
BtsCI	GGATG	3 cut(s)	21, 352, 657
Cac8I	GCNNGC	1 cut(s)	726
CfoI	GCGC	1 cut(s)	781
Cfr10I	RCCGGY	1 cut(s)	200
Cfr13I	GGNCC	2 cut(s)	203, 595
ClaI	ATCGAT	1 cut(s)	757
CsiI	ACCWGGT	1 cut(s)	255
Csp6I	GTAC	1 cut(s)	253
CspCI	CAANNNNNGTGG	2 cut(s)	56, 91
CviAII	CATG	5 cut(s)	121, 131, 287, 428, 976
CviQI	GTAC	1 cut(s)	253
DdeI	CTNAG	3 cut(s)	162, 396, 599
DpnI	GATC	2 cut(s)	756, 837
DpnII	GATC	2 cut(s)	754, 835
DrdI	GACNNNNNNGTC	1 cut(s)	282
DseDI	GACNNNNNNGTC	1 cut(s)	282
Eam1104I	CTCTTC	1 cut(s)	381
EarI	CTCTTC	1 cut(s)	381
Ecl136II	GAGCTC	1 cut(s)	166
Eco147I	AGGCCT	1 cut(s)	450
Eco24I	GRGCYC	1 cut(s)	168
Eco31I	GGTCTC	1 cut(s)	437
Eco32I	GATATC	1 cut(s)	583
Eco47I	GGWCC	2 cut(s)	203, 595
Eco53kI	GAGCTC	1 cut(s)	166
Eco81I	CCTNAGG	1 cut(s)	599
Eco91I	GGTNACC	2 cut(s)	671, 845
EcoICRI	GAGCTC	1 cut(s)	166
EcoO109I	RGGNCCY	1 cut(s)	595
EcoO65I	GGTNACC	2 cut(s)	671, 845
EcoRI	GAATTC	2 cut(s)	362, 919
EcoRII	CCWGG	3 cut(s)	216, 255, 849
EcoRV	GATATC	1 cut(s)	583
EcoT38I	GRGCYC	1 cut(s)	168
Esp3I	CGTCTC	1 cut(s)	17
FaeI	CATG	5 cut(s)	124, 134, 290, 431, 979
FalI	AAGNNNNNCTT	4 cut(s)	118, 150, 384, 416
FaqI	GGGAC	2 cut(s)	189, 288
FatI	CATG	5 cut(s)	120, 130, 286, 427, 975
FauI	CCCGC	2 cut(s)	214, 886
FbaI	TGATCA	1 cut(s)	835
Fnu4HI	GCNGC	2 cut(s)	741, 824
FokI	GGATG	3 cut(s)	8, 339, 664
FriOI	GRGCYC	1 cut(s)	168
Fsp4HI	GCNGC	2 cut(s)	741, 824
GlaI	GCGC	1 cut(s)	780
GluI	GCNGC	2 cut(s)	741, 824
GsuI	CTGGAG	1 cut(s)	200
HaeIII	GGCC	2 cut(s)	146, 450
HapII	CCGG	1 cut(s)	201
HhaI	GCGC	1 cut(s)	781
Hin1II	CATG	5 cut(s)	124, 134, 290, 431, 979
Hin6I	GCGC	1 cut(s)	779
HinP1I	GCGC	1 cut(s)	779
HindIII	AAGCTT	2 cut(s)	398, 992
HinfI	GANTC	5 cut(s)	102, 158, 485, 610, 700
HpaII	CCGG	1 cut(s)	201
HphI	GGTGA	5 cut(s)	167, 665, 776, 845, 857
Hpy166II	GTNNAC	2 cut(s)	417, 958
Hpy188I	TCNGA	6 cut(s)	107, 163, 651, 711, 862, 903
Hpy188III	TCNNGA	4 cut(s)	731, 752, 805, 926
Hpy8I	GTNNAC	2 cut(s)	417, 958
HpyAV	CCTTC	1 cut(s)	758
HpyCH4III	ACNGT	1 cut(s)	671
HpyCH4IV	ACGT	1 cut(s)	951
HpyCH4V	TGCA	3 cut(s)	78, 298, 971
HpyF10VI	GCNNNNNNNGC	3 cut(s)	51, 206, 575
HpyF3I	CTNAG	3 cut(s)	162, 396, 599
HpySE526I	ACGT	1 cut(s)	951
Hsp92II	CATG	5 cut(s)	124, 134, 290, 431, 979
HspAI	GCGC	1 cut(s)	779
Ksp22I	TGATCA	1 cut(s)	835
Kzo9I	GATC	2 cut(s)	754, 835
LmnI	GCTCC	2 cut(s)	59, 748
Lsp1109I	GCAGC	2 cut(s)	727, 810
LweI	GCATC	4 cut(s)	30, 226, 766, 958
MabI	ACCWGGT	1 cut(s)	255
MaeII	ACGT	1 cut(s)	951
MaeIII	GTNAC	3 cut(s)	155, 671, 845
MalI	GATC	2 cut(s)	756, 837
MboI	GATC	2 cut(s)	754, 835
MboII	GAAGA	6 cut(s)	398, 419, 619, 646, 706, 825
MfeI	CAATTG	2 cut(s)	381, 492
MhlI	GDGCHC	2 cut(s)	168, 726
MluCI	AATT	9 cut(s)	72, 335, 362, 375, 381, 438, 492, 885, 919
MlyI	GAGTC	2 cut(s)	152, 479
MseI	TTAA	2 cut(s)	174, 437
MslI	CAYNNNNRTG	2 cut(s)	843, 976
MspI	CCGG	1 cut(s)	201
MspR9I	CCNGG	3 cut(s)	218, 257, 851
MunI	CAATTG	2 cut(s)	381, 492
Mva1269I	GAATGC	1 cut(s)	799
MvaI	CCWGG	3 cut(s)	218, 257, 851
MwoI	GCNNNNNNNGC	3 cut(s)	51, 206, 575
NdeII	GATC	2 cut(s)	754, 835
NlaIII	CATG	5 cut(s)	124, 134, 290, 431, 979
NlaIV	GGNNCC	2 cut(s)	34, 205
NmeAIII	GCCGAG	1 cut(s)	9
NmuCI	GTSAC	3 cut(s)	155, 671, 845
OliI	CACNNNNGTG	2 cut(s)	843, 976
PceI	AGGCCT	1 cut(s)	450
PcsI	WCGNNNNNNNCGW	1 cut(s)	806
PctI	GAATGC	1 cut(s)	799
PfeI	GAWTC	3 cut(s)	102, 610, 700
PkrI	GCNGC	2 cut(s)	742, 825
Ple19I	CGATCG	1 cut(s)	757
PleI	GAGTC	2 cut(s)	152, 479
PpsI	GAGTC	2 cut(s)	152, 479
PpuMI	RGGWCCY	1 cut(s)	595
Psp124BI	GAGCTC	1 cut(s)	168
Psp5II	RGGWCCY	1 cut(s)	595
Psp6I	CCWGG	3 cut(s)	216, 255, 849
PspEI	GGTNACC	2 cut(s)	671, 845
PspGI	CCWGG	3 cut(s)	216, 255, 849
PspN4I	GGNNCC	2 cut(s)	34, 205
PspPI	GGNCC	2 cut(s)	203, 595
PspPPI	RGGWCCY	1 cut(s)	595
PvuI	CGATCG	1 cut(s)	757
RsaI	GTAC	1 cut(s)	254
RsaNI	GTAC	1 cut(s)	253
RseI	CAYNNNNRTG	2 cut(s)	843, 976
SacI	GAGCTC	1 cut(s)	168
SaqAI	TTAA	2 cut(s)	174, 437
SatI	GCNGC	2 cut(s)	741, 824
Sau3AI	GATC	2 cut(s)	754, 835
Sau96I	GGNCC	2 cut(s)	203, 595
SchI	GAGTC	2 cut(s)	152, 479
ScrFI	CCNGG	3 cut(s)	218, 257, 851
SduI	GDGCHC	2 cut(s)	168, 726
SexAI	ACCWGGT	1 cut(s)	255
SfaNI	GCATC	4 cut(s)	30, 226, 766, 958
SinI	GGWCC	2 cut(s)	203, 595
SmiMI	CAYNNNNRTG	2 cut(s)	843, 976
Sse9I	AATT	9 cut(s)	72, 335, 362, 375, 381, 438, 492, 885, 919
SseBI	AGGCCT	1 cut(s)	450
SsiI	CCGC	4 cut(s)	96, 207, 893, 937
SstI	GAGCTC	1 cut(s)	168
StuI	AGGCCT	1 cut(s)	450
StyD4I	CCNGG	3 cut(s)	216, 255, 849
TaaI	ACNGT	1 cut(s)	671
TaiI	ACGT	1 cut(s)	954
TaqI	TCGA	2 cut(s)	660, 757
TaqII	GACCGA	1 cut(s)	790
TasI	AATT	9 cut(s)	72, 335, 362, 375, 381, 438, 492, 885, 919
TfiI	GAWTC	3 cut(s)	102, 610, 700
Tru1I	TTAA	2 cut(s)	174, 437
Tru9I	TTAA	2 cut(s)	174, 437
TseFI	GTSAC	3 cut(s)	155, 671, 845
TseI	GCWGC	2 cut(s)	740, 823
Tsp45I	GTSAC	3 cut(s)	155, 671, 845
TspDTI	ATGAA	2 cut(s)	357, 692
TspGWI	ACGGA	2 cut(s)	326, 345
VpaK11BI	GGWCC	2 cut(s)	203, 595
XapI	RAATTY	3 cut(s)	362, 885, 919

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.