Prupe.2G096100_v2.0.a1

Phosphoglucan phosphatase DSP4

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
15122766 .. 15129335
6570 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G096100.1

Sequence Viewer

Length: 1125 bp
ATGAACTGTCTTCAGAATCTTCCAGGATTCTCTGTTTTGCCTCTACGTAGCTTCAGATGCAATCCCAGAAAGCCTTCGTTCTGTATCACAACTCTGGGAATGATGAGTAGCACTGATCTGCCCCGACGTATGGCTGTCAAGGCAATTTCTGGTTCCACATCTAGTGCTGAGACGAGTGGTGCCAAGGCAGAAGAGGAAAAATCTGAGATGTATAGTACTAACATGACTGAAGCCATGGGCGCTGTCTTGACCTATAGGCATGAGCTAGGTATGAACTACAACTTCATACGTCCAGATCTGATTGTGGGGTCTTGCCTACAGACTCCGAAAGATGTTGACAAGCTTCGAAGCATCGGAGTGAAGACTATTTTTTGCTTGCAACAAGATTCAGATTTGGAATATTTTAGTGTTGACATTGGTGCCATTCGAGAGTATGCCAAAACATTTGATGACATTGAACACTTGCGTGCTGAAATAAGGGATTTTGATGCATATGATCTACGTCTCCGGCTTCCTGCTGTCGTTAGCAAATTATATAAGGCCATAAACCGAAATGGAGGTGTCACTTATGTGCATTGCACTGCTGGACTTGGAAGAGCTCCTGCTGCTGCGTTGGCTTACATGTTCTGGGTACAGGGATACAAGCTGACAGATGCTGTCAATGTACTGTTGAGCAAGCGATCGTGCTGCCCAAAACTGGATGCTATTAAAAATGCTACTGCTGATATTCTTACAGGCATGACAAAAAGGCTTGTCACGTTAACTTGGGGAAATCATAATTGCACTACAGTGGAAATCTCTGGACTGGATATTGGATGGGGTCAGAGTATTCCTTTAGAGTTCAATAAGGAACAGGGTTCATGGATTCTCAAGAGGGAATTGCCGGAAGGACGATATGAATATAAGTACATTATTGATGGTGCATGGACGCATAACAAATACGAGCTTTTCACCTCTCCCAACAAGGATGGCCATGTCAACAATTATGTTCAAGTTGTTGAGGATGATCCTGACAGTACTAGTGCTGCAATCCGGAAGAGGTTGACTGGTGAAGATCCTCGTCTTACAACCGAGGAACGACGTAAAATAAGACAGTTTCTCGAAACGTGTCCCGGTGATGAGTGA

Protein Analysis

375

Amino Acids

42.05

Weight (kDa)

6.99

Isoelectric Point (pI)

49.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 179, 419
AccIII TCCGGA 1 cut(s) 1032
AclWI GGATC 2 cut(s) 1001, 1049
AcoI YGGCCR 1 cut(s) 970
AcuI CTGAAG 2 cut(s) 37, 249
AfaI GTAC 5 cut(s) 217, 633, 666, 908, 1018
AfiI CCNNNNNNNGG 2 cut(s) 130, 697
AflIII ACRYGT 2 cut(s) 621, 1106
AgsI TTSAA 3 cut(s) 458, 844, 992
AhlI ACTAGT 1 cut(s) 1019
AjnI CCWGG 1 cut(s) 22
AleI CACNNNNGTG 3 cut(s) 465, 569, 788
AluBI AGCT 6 cut(s) 51, 265, 343, 599, 646, 946
AluI AGCT 6 cut(s) 51, 265, 343, 599, 646, 946
Alw21I GWGCWC 1 cut(s) 601
Alw26I GTCTC 2 cut(s) 164, 509
AlwI GGATC 2 cut(s) 1001, 1049
AlwNI CAGNNNCTG 1 cut(s) 656
Aor13HI TCCGGA 1 cut(s) 1032
AoxI GGCC 2 cut(s) 540, 970
ApeKI GCWGC 4 cut(s) 605, 608, 687, 1025
Asp700I GAANNNNTTC 1 cut(s) 73
AspLEI GCGC 1 cut(s) 242
AsuC2I CCSGG 1 cut(s) 1113
AsuHPI GGTGA 2 cut(s) 943, 1061
AsuII TTCGAA 1 cut(s) 346
BalI TGGCCA 1 cut(s) 972
BanI GGYRCC 2 cut(s) 179, 419
BanII GRGCYC 1 cut(s) 601
BbsI GAAGAC 2 cut(s) 2, 368
Bbv12I GWGCWC 1 cut(s) 601
BbvI GCAGC 4 cut(s) 592, 595, 674, 1012
BccI CCATC 3 cut(s) 810, 911, 962
BcgI CGANNNNNNTGC 2 cut(s) 669, 703
BciT130I CCWGG 1 cut(s) 24
BciVI GTATCC 1 cut(s) 632
BcnI CCSGG 1 cut(s) 1113
BcoDI GTCTC 2 cut(s) 164, 509
BcuI ACTAGT 1 cut(s) 1019
BfaI CTAG 3 cut(s) 162, 266, 1020
BfmI CTRYAG 3 cut(s) 253, 317, 786
BfoI RGCGCY 1 cut(s) 243
BfuI GTATCC 1 cut(s) 632
BglII AGATCT 1 cut(s) 295
BisI GCNGC 4 cut(s) 606, 609, 688, 1026
BlsI GCNGC 4 cut(s) 607, 610, 689, 1027
BmcAI AGTACT 2 cut(s) 217, 1018
Bme1390I CCNGG 2 cut(s) 24, 1113
BmiI GGNNCC 3 cut(s) 154, 181, 421
BmrFI CCNGG 2 cut(s) 24, 1113
BmsI GCATC 5 cut(s) 47, 360, 478, 643, 691
BpiI GAAGAC 2 cut(s) 2, 368
Bpu14I TTCGAA 1 cut(s) 346
BpuEI CTTGAG 1 cut(s) 854
BpuMI CCSGG 1 cut(s) 1113
BsaAI YACGTR 1 cut(s) 47
BsaJI CCNNGG 3 cut(s) 183, 234, 1071
BsaWI WCCGGW 1 cut(s) 1032
Bsc4I CCNNNNNNNGG 2 cut(s) 130, 697
Bse1I ACTGG 3 cut(s) 702, 810, 1051
Bse3DI GCAATG 1 cut(s) 574
BseAI TCCGGA 1 cut(s) 1032
BseBI CCWGG 1 cut(s) 24
BseDI CCNNGG 3 cut(s) 183, 234, 1071
BseGI GGATG 4 cut(s) 706, 821, 973, 1009
BseLI CCNNNNNNNGG 2 cut(s) 130, 697
BseMI GCAATG 1 cut(s) 574
BseMII CTCAG 2 cut(s) 159, 195
BseNI ACTGG 3 cut(s) 702, 810, 1051
BseXI GCAGC 4 cut(s) 592, 595, 674, 1012
Bsh1285I CGRYCG 1 cut(s) 683
BshFI GGCC 2 cut(s) 542, 972
BshNI GGYRCC 2 cut(s) 179, 419
BsiEI CGRYCG 1 cut(s) 683
BsiHKAI GWGCWC 1 cut(s) 601
BsiSI CCGG 4 cut(s) 508, 884, 1033, 1113
BslFI GGGAC 1 cut(s) 1095
BslI CCNNNNNNNGG 2 cut(s) 130, 697
BsmAI GTCTC 2 cut(s) 164, 509
BsmBI CGTCTC 2 cut(s) 164, 509
BsmFI GGGAC 1 cut(s) 1095
BsnI GGCC 2 cut(s) 542, 972
Bsp119I TTCGAA 1 cut(s) 346
Bsp1286I GDGCHC 1 cut(s) 601
Bsp13I TCCGGA 1 cut(s) 1032
Bsp143I GATC 6 cut(s) 115, 295, 496, 680, 1006, 1054
Bsp19I CCATGG 1 cut(s) 234
BspANI GGCC 2 cut(s) 542, 972
BspCNI CTCAG 2 cut(s) 160, 196
BspEI TCCGGA 1 cut(s) 1032
BspLI GGNNCC 3 cut(s) 154, 181, 421
BspPI GGATC 2 cut(s) 1001, 1049
BspQI GCTCTTC 1 cut(s) 589
BspT104I TTCGAA 1 cut(s) 346
BspT107I GGYRCC 2 cut(s) 179, 419
BsrDI GCAATG 1 cut(s) 574
BsrI ACTGG 3 cut(s) 702, 810, 1051
BssECI CCNNGG 3 cut(s) 183, 234, 1071
BssMI GATC 6 cut(s) 115, 295, 496, 680, 1006, 1054
BssT1I CCWWGG 2 cut(s) 183, 234
Bst2UI CCWGG 1 cut(s) 24
Bst4CI ACNGT 5 cut(s) 8, 669, 790, 1016, 1095
Bst6I CTCTTC 3 cut(s) 186, 589, 1031
BstBAI YACGTR 1 cut(s) 47
BstBI TTCGAA 1 cut(s) 346
BstC8I GCNNGC 3 cut(s) 377, 468, 677
BstDEI CTNAG 2 cut(s) 168, 204
BstDSI CCRYGG 1 cut(s) 234
BstF5I GGATG 4 cut(s) 706, 821, 973, 1009
BstH2I RGCGCY 1 cut(s) 243
BstHHI GCGC 1 cut(s) 242
BstKTI GATC 6 cut(s) 118, 298, 499, 683, 1009, 1057
BstMAI GTCTC 2 cut(s) 164, 509
BstMBI GATC 6 cut(s) 115, 295, 496, 680, 1006, 1054
BstMCI CGRYCG 1 cut(s) 683
BstMWI GCNNNNNNNGC 5 cut(s) 57, 140, 239, 605, 614
BstNI CCWGG 1 cut(s) 24
BstNSI RCATGY 1 cut(s) 625
BstSCI CCNGG 2 cut(s) 22, 1111
BstSFI CTRYAG 3 cut(s) 253, 317, 786
BstSNI TACGTA 1 cut(s) 47
BstV1I GCAGC 4 cut(s) 592, 595, 674, 1012
BstV2I GAAGAC 2 cut(s) 2, 368
BstX2I RGATCY 2 cut(s) 295, 1054
BstYI RGATCY 2 cut(s) 295, 1054
BsuI GTATCC 1 cut(s) 632
BsuRI GGCC 2 cut(s) 542, 972
BtgI CCRYGG 1 cut(s) 234
BtsCI GGATG 4 cut(s) 706, 821, 973, 1009
BtsI GCAGTG 1 cut(s) 579
BtsIMutI CAGTG 3 cut(s) 111, 579, 795
Cac8I GCNNGC 3 cut(s) 377, 468, 677
CaiI CAGNNNCTG 1 cut(s) 656
CfoI GCGC 1 cut(s) 242
CseI GACGC 1 cut(s) 937
Csp6I GTAC 5 cut(s) 216, 632, 665, 907, 1017
CviAII CATG 8 cut(s) 223, 235, 260, 622, 739, 861, 924, 974
CviQI GTAC 5 cut(s) 216, 632, 665, 907, 1017
DdeI CTNAG 2 cut(s) 168, 204
DpnI GATC 6 cut(s) 117, 297, 498, 682, 1008, 1056
DpnII GATC 6 cut(s) 115, 295, 496, 680, 1006, 1054
EaeI YGGCCR 1 cut(s) 970
Eam1104I CTCTTC 3 cut(s) 186, 589, 1031
EarI CTCTTC 3 cut(s) 186, 589, 1031
Ecl136II GAGCTC 1 cut(s) 599
Eco105I TACGTA 1 cut(s) 47
Eco130I CCWWGG 2 cut(s) 183, 234
Eco24I GRGCYC 1 cut(s) 601
Eco53kI GAGCTC 1 cut(s) 599
Eco57I CTGAAG 2 cut(s) 37, 249
EcoICRI GAGCTC 1 cut(s) 599
EcoRII CCWGG 1 cut(s) 22
EcoT14I CCWWGG 2 cut(s) 183, 234
EcoT22I ATGCAT 1 cut(s) 493
EcoT38I GRGCYC 1 cut(s) 601
ErhI CCWWGG 2 cut(s) 183, 234
Esp3I CGTCTC 2 cut(s) 164, 509
FaeI CATG 8 cut(s) 226, 238, 263, 625, 742, 864, 927, 977
FaqI GGGAC 1 cut(s) 1095
FatI CATG 8 cut(s) 222, 234, 259, 621, 738, 860, 923, 973
FauNDI CATATG 1 cut(s) 493
Fnu4HI GCNGC 4 cut(s) 606, 609, 688, 1026
FokI GGATG 4 cut(s) 713, 828, 980, 1016
FriOI GRGCYC 1 cut(s) 601
Fsp4HI GCNGC 4 cut(s) 606, 609, 688, 1026
FspBI CTAG 3 cut(s) 162, 266, 1020
GlaI GCGC 1 cut(s) 241
GluI GCNGC 4 cut(s) 606, 609, 688, 1026
HaeII RGCGCY 1 cut(s) 243
HaeIII GGCC 2 cut(s) 542, 972
HapII CCGG 4 cut(s) 508, 884, 1033, 1113
HgaI GACGC 1 cut(s) 937
HhaI GCGC 1 cut(s) 242
Hin1II CATG 8 cut(s) 226, 238, 263, 625, 742, 864, 927, 977
Hin6I GCGC 1 cut(s) 240
HinP1I GCGC 1 cut(s) 240
HincII GTYRAC 5 cut(s) 337, 412, 762, 979, 1044
HindII GTYRAC 5 cut(s) 337, 412, 762, 979, 1044
HindIII AAGCTT 1 cut(s) 341
HinfI GANTC 5 cut(s) 16, 27, 322, 386, 865
HpaI GTTAAC 1 cut(s) 762
HpaII CCGG 4 cut(s) 508, 884, 1033, 1113
HphI GGTGA 2 cut(s) 943, 1061
Hpy166II GTNNAC 5 cut(s) 337, 412, 762, 979, 1044
Hpy188I TCNGA 8 cut(s) 15, 56, 205, 300, 327, 356, 391, 825
Hpy188III TCNNGA 8 cut(s) 247, 293, 428, 801, 871, 1010, 1033, 1100
Hpy8I GTNNAC 5 cut(s) 337, 412, 762, 979, 1044
Hpy99I CGWCG 2 cut(s) 129, 1083
HpyAV CCTTC 2 cut(s) 84, 881
HpyCH4III ACNGT 5 cut(s) 8, 669, 790, 1016, 1095
HpyCH4IV ACGT 7 cut(s) 46, 127, 289, 502, 758, 1081, 1106
HpyCH4V TGCA 8 cut(s) 60, 379, 491, 574, 579, 783, 923, 1028
HpyF10VI GCNNNNNNNGC 5 cut(s) 57, 140, 239, 605, 614
HpyF3I CTNAG 2 cut(s) 168, 204
HpySE526I ACGT 7 cut(s) 46, 127, 289, 502, 758, 1081, 1106
Hsp92II CATG 8 cut(s) 226, 238, 263, 625, 742, 864, 927, 977
HspAI GCGC 1 cut(s) 240
Kpn2I TCCGGA 1 cut(s) 1032
KspAI GTTAAC 1 cut(s) 762
Kzo9I GATC 6 cut(s) 115, 295, 496, 680, 1006, 1054
LguI GCTCTTC 1 cut(s) 589
LmnI GCTCC 1 cut(s) 604
Lsp1109I GCAGC 4 cut(s) 592, 595, 674, 1012
LweI GCATC 5 cut(s) 47, 360, 478, 643, 691
MaeI CTAG 3 cut(s) 162, 266, 1020
MaeII ACGT 7 cut(s) 46, 127, 289, 502, 758, 1081, 1106
MaeIII GTNAC 2 cut(s) 562, 754
MalI GATC 6 cut(s) 117, 297, 498, 682, 1008, 1056
MboI GATC 6 cut(s) 115, 295, 496, 680, 1006, 1054
MboII GAAGA 6 cut(s) 11, 203, 373, 606, 1048, 1064
MflI RGATCY 2 cut(s) 295, 1054
MhlI GDGCHC 1 cut(s) 601
MlsI TGGCCA 1 cut(s) 972
MluCI AATT 5 cut(s) 144, 530, 778, 878, 982
MluNI TGGCCA 1 cut(s) 972
MlyI GAGTC 1 cut(s) 316
MnlI CCTC 9 cut(s) 51, 187, 551, 867, 964, 994, 1032, 1066, 1068
Mox20I TGGCCA 1 cut(s) 972
Mph1103I ATGCAT 1 cut(s) 493
MroI TCCGGA 1 cut(s) 1032
MroXI GAANNNNTTC 1 cut(s) 73
MscI TGGCCA 1 cut(s) 972
MseI TTAA 2 cut(s) 708, 761
MslI CAYNNNNRTG 4 cut(s) 356, 465, 569, 788
Msp20I TGGCCA 1 cut(s) 972
MspI CCGG 4 cut(s) 508, 884, 1033, 1113
MspR9I CCNGG 2 cut(s) 24, 1113
MvaI CCWGG 1 cut(s) 24
MwoI GCNNNNNNNGC 5 cut(s) 57, 140, 239, 605, 614
NciI CCSGG 1 cut(s) 1113
NcoI CCATGG 1 cut(s) 234
NdeI CATATG 1 cut(s) 493
NdeII GATC 6 cut(s) 115, 295, 496, 680, 1006, 1054
NlaIII CATG 8 cut(s) 226, 238, 263, 625, 742, 864, 927, 977
NlaIV GGNNCC 3 cut(s) 154, 181, 421
NmuCI GTSAC 2 cut(s) 562, 754
NsiI ATGCAT 1 cut(s) 493
NspI RCATGY 1 cut(s) 625
NspV TTCGAA 1 cut(s) 346
OliI CACNNNNGTG 3 cut(s) 465, 569, 788
PciI ACATGT 1 cut(s) 621
PciSI GCTCTTC 1 cut(s) 589
PdmI GAANNNNTTC 1 cut(s) 73
PfeI GAWTC 4 cut(s) 16, 27, 386, 865
PfoI TCCNGGA 1 cut(s) 22
PkrI GCNGC 4 cut(s) 607, 610, 689, 1027
Ple19I CGATCG 1 cut(s) 683
PleI GAGTC 1 cut(s) 316
PpsI GAGTC 1 cut(s) 316
Ppu21I YACGTR 1 cut(s) 47
PscI ACATGT 1 cut(s) 621
Psp124BI GAGCTC 1 cut(s) 601
Psp6I CCWGG 1 cut(s) 22
PspGI CCWGG 1 cut(s) 22
PspN4I GGNNCC 3 cut(s) 154, 181, 421
PstNI CAGNNNCTG 1 cut(s) 656
PsuI RGATCY 2 cut(s) 295, 1054
PvuI CGATCG 1 cut(s) 683
RsaI GTAC 5 cut(s) 217, 633, 666, 908, 1018
RsaNI GTAC 5 cut(s) 216, 632, 665, 907, 1017
RseI CAYNNNNRTG 4 cut(s) 356, 465, 569, 788
SacI GAGCTC 1 cut(s) 601
SapI GCTCTTC 1 cut(s) 589
SaqAI TTAA 2 cut(s) 708, 761
SatI GCNGC 4 cut(s) 606, 609, 688, 1026
Sau3AI GATC 6 cut(s) 115, 295, 496, 680, 1006, 1054
ScaI AGTACT 2 cut(s) 217, 1018
SchI GAGTC 1 cut(s) 316
ScrFI CCNGG 2 cut(s) 24, 1113
SduI GDGCHC 1 cut(s) 601
SfaNI GCATC 5 cut(s) 47, 360, 478, 643, 691
SfcI CTRYAG 3 cut(s) 253, 317, 786
SfuI TTCGAA 1 cut(s) 346
SmiMI CAYNNNNRTG 4 cut(s) 356, 465, 569, 788
SmlI CTYRAG 1 cut(s) 869
SmoI CTYRAG 1 cut(s) 869
SnaBI TACGTA 1 cut(s) 47
SpeI ACTAGT 1 cut(s) 1019
Sse9I AATT 5 cut(s) 144, 530, 778, 878, 982
SspI AATATT 1 cut(s) 401
SspMI CTAG 3 cut(s) 162, 266, 1020
SstI GAGCTC 1 cut(s) 601
StyD4I CCNGG 2 cut(s) 22, 1111
StyI CCWWGG 2 cut(s) 183, 234
TaaI ACNGT 5 cut(s) 8, 669, 790, 1016, 1095
TaiI ACGT 7 cut(s) 49, 130, 292, 505, 761, 1084, 1109
TaqI TCGA 3 cut(s) 346, 427, 1101
TasI AATT 5 cut(s) 144, 530, 778, 878, 982
TatI WGTACW 4 cut(s) 215, 664, 906, 1016
TfiI GAWTC 4 cut(s) 16, 27, 386, 865
Tru1I TTAA 2 cut(s) 708, 761
Tru9I TTAA 2 cut(s) 708, 761
TscAI CASTG 3 cut(s) 118, 586, 795
TseFI GTSAC 2 cut(s) 562, 754
TseI GCWGC 4 cut(s) 605, 608, 687, 1025
Tsp45I GTSAC 2 cut(s) 562, 754
TspDTI ATGAA 5 cut(s) 17, 274, 287, 849, 912
TspRI CASTG 3 cut(s) 118, 586, 795
XceI RCATGY 1 cut(s) 625
XmnI GAANNNNTTC 1 cut(s) 73
XspI CTAG 3 cut(s) 162, 266, 1020
ZrmI AGTACT 2 cut(s) 217, 1018
Zsp2I ATGCAT 1 cut(s) 493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.