Chromo domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G17690 AT5G17690 AT5G17690 |
| fragaria_vesca | FvH4_7g08280 FvH4_7g08280 FvH4_7g08280 FvH4_7g08280 |
| malus_domestica | MD02G1231000.v1.1 MD07G1081800.v1.1 |
| prunus_persica | Prupe.2G107000_v2.0.a1 Prupe.2G107000_v2.0.a1 |
| pyrus_communis | pycom02g20010 pycom07g06510 |
| rosa_chinensis | RchiOBHm_Chr1g0340791 RchiOBHm_Chr4g0424951 |
| rosa_laevigata | RLG00000029043 |
| rosa_multiflora | Rmu_co8307041.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00311470 |
| rosa_rugosa | Rorug01G0161300.1 |
| rosa_samantha | Rh1AG176600 Rh1BG144400 Rh1CG164100 Rh1DG176200 |
| rosa_wichuraiana | Rw1G014590 Rw1G014630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1006 |
| AccBSI | CCGCTC | 1 cut(s) | 131 |
| AccI | GTMKAC | 1 cut(s) | 915 |
| AciI | CCGC | 3 cut(s) | 129, 352, 615 |
| AclWI | GGATC | 2 cut(s) | 551, 794 |
| AcoI | YGGCCR | 1 cut(s) | 392 |
| AcsI | RAATTY | 1 cut(s) | 1111 |
| AcuI | CTGAAG | 3 cut(s) | 92, 632, 912 |
| AfaI | GTAC | 3 cut(s) | 867, 933, 1337 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 346, 537 |
| AgsI | TTSAA | 7 cut(s) | 65, 167, 438, 683, 753, 1116, 1191 |
| AjnI | CCWGG | 1 cut(s) | 1212 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 16, 48, 1171, 1203 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 958, 990 |
| Alw21I | GWGCWC | 2 cut(s) | 366, 819 |
| Alw26I | GTCTC | 2 cut(s) | 392, 992 |
| AlwI | GGATC | 2 cut(s) | 551, 794 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 401 |
| Ama87I | CYCGRG | 1 cut(s) | 631 |
| AoxI | GGCC | 1 cut(s) | 392 |
| ApeKI | GCWGC | 5 cut(s) | 112, 125, 541, 544, 617 |
| ApoI | RAATTY | 1 cut(s) | 1111 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 333 |
| AspLEI | GCGC | 3 cut(s) | 297, 498, 504 |
| AspS9I | GGNCC | 2 cut(s) | 349, 1245 |
| AsuC2I | CCSGG | 2 cut(s) | 511, 1105 |
| AsuHPI | GGTGA | 8 cut(s) | 212, 230, 242, 254, 260, 371, 1153, 1219 |
| AvaI | CYCGRG | 1 cut(s) | 631 |
| AvaII | GGWCC | 2 cut(s) | 349, 1245 |
| BalI | TGGCCA | 1 cut(s) | 394 |
| BanII | GRGCYC | 3 cut(s) | 366, 420, 819 |
| Bbv12I | GWGCWC | 2 cut(s) | 366, 819 |
| BbvCI | CCTCAGC | 1 cut(s) | 657 |
| BbvI | GCAGC | 5 cut(s) | 99, 137, 553, 556, 604 |
| BccI | CCATC | 5 cut(s) | 191, 221, 239, 257, 689 |
| BciT130I | CCWGG | 1 cut(s) | 1214 |
| BcnI | CCSGG | 2 cut(s) | 511, 1105 |
| BcoDI | GTCTC | 2 cut(s) | 392, 992 |
| BfaI | CTAG | 1 cut(s) | 134 |
| BisI | GCNGC | 6 cut(s) | 113, 126, 129, 542, 545, 618 |
| BlsI | GCNGC | 6 cut(s) | 114, 127, 130, 543, 546, 619 |
| Bme1390I | CCNGG | 3 cut(s) | 511, 1105, 1214 |
| Bme18I | GGWCC | 2 cut(s) | 349, 1245 |
| BmeT110I | CYCGRG | 1 cut(s) | 631 |
| BmgT120I | GGNCC | 2 cut(s) | 349, 1245 |
| BmiI | GGNNCC | 2 cut(s) | 350, 417 |
| BmrFI | CCNGG | 3 cut(s) | 511, 1105, 1214 |
| BmrI | ACTGGG | 1 cut(s) | 1025 |
| BmsI | GCATC | 3 cut(s) | 496, 724, 896 |
| BmuI | ACTGGG | 1 cut(s) | 1025 |
| BpmI | CTGGAG | 2 cut(s) | 350, 972 |
| Bpu10I | CCTNAGC | 1 cut(s) | 657 |
| BpuEI | CTTGAG | 2 cut(s) | 159, 1268 |
| BpuMI | CCSGG | 2 cut(s) | 511, 1105 |
| Bsa29I | ATCGAT | 1 cut(s) | 1311 |
| BsaBI | GATNNNNATC | 1 cut(s) | 249 |
| BsaJI | CCNNGG | 4 cut(s) | 309, 420, 909, 1104 |
| BsaWI | WCCGGW | 1 cut(s) | 1332 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 346, 537 |
| Bse1I | ACTGG | 4 cut(s) | 367, 929, 955, 1020 |
| Bse3DI | GCAATG | 2 cut(s) | 48, 1245 |
| Bse8I | GATNNNNATC | 1 cut(s) | 249 |
| BseBI | CCWGG | 1 cut(s) | 1214 |
| BseCI | ATCGAT | 1 cut(s) | 1311 |
| BseDI | CCNNGG | 4 cut(s) | 309, 420, 909, 1104 |
| BseGI | GGATG | 2 cut(s) | 1222, 1294 |
| BseJI | GATNNNNATC | 1 cut(s) | 249 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 346, 537 |
| BseMI | GCAATG | 2 cut(s) | 48, 1245 |
| BseMII | CTCAG | 3 cut(s) | 671, 729, 832 |
| BseNI | ACTGG | 4 cut(s) | 367, 929, 955, 1020 |
| BseRI | GAGGAG | 2 cut(s) | 30, 507 |
| BseXI | GCAGC | 5 cut(s) | 99, 137, 553, 556, 604 |
| BsgI | GTGCAG | 2 cut(s) | 942, 1170 |
| BshFI | GGCC | 1 cut(s) | 394 |
| BshVI | ATCGAT | 1 cut(s) | 1311 |
| BsiHKAI | GWGCWC | 2 cut(s) | 366, 819 |
| BsiHKCI | CYCGRG | 1 cut(s) | 631 |
| BsiSI | CCGG | 3 cut(s) | 510, 1104, 1333 |
| BslFI | GGGAC | 1 cut(s) | 526 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 346, 537 |
| BsmAI | GTCTC | 2 cut(s) | 392, 992 |
| BsmBI | CGTCTC | 1 cut(s) | 992 |
| BsmFI | GGGAC | 1 cut(s) | 526 |
| BsnI | GGCC | 1 cut(s) | 394 |
| BsoBI | CYCGRG | 1 cut(s) | 631 |
| Bsp1286I | GDGCHC | 3 cut(s) | 366, 420, 819 |
| Bsp1407I | TGTACA | 1 cut(s) | 865 |
| Bsp143I | GATC | 5 cut(s) | 250, 556, 643, 799, 1308 |
| BspACI | CCGC | 3 cut(s) | 129, 352, 615 |
| BspANI | GGCC | 1 cut(s) | 394 |
| BspCNI | CTCAG | 3 cut(s) | 670, 730, 831 |
| BspDI | ATCGAT | 1 cut(s) | 1311 |
| BspLI | GGNNCC | 2 cut(s) | 350, 417 |
| BspPI | GGATC | 2 cut(s) | 551, 794 |
| BsrBI | CCGCTC | 1 cut(s) | 131 |
| BsrDI | GCAATG | 2 cut(s) | 48, 1245 |
| BsrGI | TGTACA | 1 cut(s) | 865 |
| BsrI | ACTGG | 4 cut(s) | 367, 929, 955, 1020 |
| BssECI | CCNNGG | 4 cut(s) | 309, 420, 909, 1104 |
| BssMI | GATC | 5 cut(s) | 250, 556, 643, 799, 1308 |
| BssT1I | CCWWGG | 2 cut(s) | 420, 909 |
| Bst2UI | CCWGG | 1 cut(s) | 1214 |
| Bst4CI | ACNGT | 1 cut(s) | 920 |
| Bst6I | CTCTTC | 4 cut(s) | 23, 108, 530, 977 |
| BstAUI | TGTACA | 1 cut(s) | 865 |
| BstC8I | GCNNGC | 5 cut(s) | 117, 306, 473, 477, 500 |
| BstDEI | CTNAG | 5 cut(s) | 657, 738, 809, 818, 957 |
| BstF5I | GGATG | 2 cut(s) | 1222, 1294 |
| BstHHI | GCGC | 3 cut(s) | 297, 498, 504 |
| BstKTI | GATC | 5 cut(s) | 253, 559, 646, 802, 1311 |
| BstMAI | GTCTC | 2 cut(s) | 392, 992 |
| BstMBI | GATC | 5 cut(s) | 250, 556, 643, 799, 1308 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 95, 125, 301, 391, 493, 658, 814 |
| BstNI | CCWGG | 1 cut(s) | 1214 |
| BstNSI | RCATGY | 1 cut(s) | 704 |
| BstSCI | CCNGG | 3 cut(s) | 509, 1103, 1212 |
| BstV1I | GCAGC | 5 cut(s) | 99, 137, 553, 556, 604 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 770 |
| Bsu15I | ATCGAT | 1 cut(s) | 1311 |
| BsuRI | GGCC | 1 cut(s) | 394 |
| BsuTUI | ATCGAT | 1 cut(s) | 1311 |
| BtsCI | GGATG | 2 cut(s) | 1222, 1294 |
| BtsI | GCAGTG | 1 cut(s) | 1158 |
| BtsIMutI | CAGTG | 2 cut(s) | 1054, 1158 |
| Cac8I | GCNNGC | 5 cut(s) | 117, 306, 473, 477, 500 |
| CaiI | CAGNNNCTG | 1 cut(s) | 401 |
| CfoI | GCGC | 3 cut(s) | 297, 498, 504 |
| Cfr13I | GGNCC | 2 cut(s) | 349, 1245 |
| ClaI | ATCGAT | 1 cut(s) | 1311 |
| CseI | GACGC | 1 cut(s) | 1009 |
| Csp6I | GTAC | 3 cut(s) | 866, 932, 1336 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 367, 402, 1287, 1322 |
| CviAII | CATG | 3 cut(s) | 411, 592, 701 |
| CviQI | GTAC | 3 cut(s) | 866, 932, 1336 |
| DdeI | CTNAG | 5 cut(s) | 657, 738, 809, 818, 957 |
| DpnI | GATC | 5 cut(s) | 252, 558, 645, 801, 1310 |
| DpnII | GATC | 5 cut(s) | 250, 556, 643, 799, 1308 |
| DraI | TTTAAA | 1 cut(s) | 991 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1006 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1006 |
| EaeI | YGGCCR | 1 cut(s) | 392 |
| Eam1104I | CTCTTC | 4 cut(s) | 23, 108, 530, 977 |
| EarI | CTCTTC | 4 cut(s) | 23, 108, 530, 977 |
| Ecl136II | GAGCTC | 2 cut(s) | 364, 817 |
| Eco130I | CCWWGG | 2 cut(s) | 420, 909 |
| Eco24I | GRGCYC | 3 cut(s) | 366, 420, 819 |
| Eco47I | GGWCC | 2 cut(s) | 349, 1245 |
| Eco53kI | GAGCTC | 2 cut(s) | 364, 817 |
| Eco57I | CTGAAG | 3 cut(s) | 92, 632, 912 |
| Eco88I | CYCGRG | 1 cut(s) | 631 |
| EcoICRI | GAGCTC | 2 cut(s) | 364, 817 |
| EcoRII | CCWGG | 1 cut(s) | 1212 |
| EcoT14I | CCWWGG | 2 cut(s) | 420, 909 |
| EcoT38I | GRGCYC | 3 cut(s) | 366, 420, 819 |
| ErhI | CCWWGG | 2 cut(s) | 420, 909 |
| Esp3I | CGTCTC | 1 cut(s) | 992 |
| FaeI | CATG | 3 cut(s) | 414, 595, 704 |
| FaiI | YATR | 7 cut(s) | 412, 593, 702, 798, 1059, 1101, 1320 |
| FaqI | GGGAC | 1 cut(s) | 526 |
| FatI | CATG | 3 cut(s) | 410, 591, 700 |
| FblI | GTMKAC | 1 cut(s) | 915 |
| Fnu4HI | GCNGC | 6 cut(s) | 113, 126, 129, 542, 545, 618 |
| FokI | GGATG | 2 cut(s) | 1229, 1281 |
| FriOI | GRGCYC | 3 cut(s) | 366, 420, 819 |
| Fsp4HI | GCNGC | 6 cut(s) | 113, 126, 129, 542, 545, 618 |
| FspBI | CTAG | 1 cut(s) | 134 |
| GlaI | GCGC | 3 cut(s) | 296, 497, 503 |
| GluI | GCNGC | 6 cut(s) | 113, 126, 129, 542, 545, 618 |
| GsuI | CTGGAG | 2 cut(s) | 350, 972 |
| HaeIII | GGCC | 1 cut(s) | 394 |
| HapII | CCGG | 3 cut(s) | 510, 1104, 1333 |
| HgaI | GACGC | 1 cut(s) | 1009 |
| HhaI | GCGC | 3 cut(s) | 297, 498, 504 |
| Hin1II | CATG | 3 cut(s) | 414, 595, 704 |
| Hin6I | GCGC | 3 cut(s) | 295, 496, 502 |
| HinP1I | GCGC | 3 cut(s) | 295, 496, 502 |
| HincII | GTYRAC | 1 cut(s) | 916 |
| HindII | GTYRAC | 1 cut(s) | 916 |
| HindIII | AAGCTT | 3 cut(s) | 302, 469, 806 |
| HinfI | GANTC | 3 cut(s) | 514, 1044, 1139 |
| HpaII | CCGG | 3 cut(s) | 510, 1104, 1333 |
| HphI | GGTGA | 8 cut(s) | 212, 230, 242, 254, 260, 371, 1153, 1219 |
| Hpy166II | GTNNAC | 1 cut(s) | 916 |
| Hpy188I | TCNGA | 6 cut(s) | 492, 821, 853, 892, 1012, 1249 |
| Hpy188III | TCNNGA | 7 cut(s) | 50, 65, 134, 167, 182, 254, 1094 |
| Hpy8I | GTNNAC | 1 cut(s) | 916 |
| Hpy99I | CGWCG | 1 cut(s) | 1253 |
| HpyAV | CCTTC | 4 cut(s) | 4, 18, 677, 957 |
| HpyCH4III | ACNGT | 1 cut(s) | 920 |
| HpyCH4IV | ACGT | 1 cut(s) | 570 |
| HpyCH4V | TGCA | 4 cut(s) | 115, 923, 1034, 1151 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 95, 125, 301, 391, 493, 658, 814 |
| HpyF3I | CTNAG | 5 cut(s) | 657, 738, 809, 818, 957 |
| HpySE526I | ACGT | 1 cut(s) | 570 |
| Hsp92II | CATG | 3 cut(s) | 414, 595, 704 |
| HspAI | GCGC | 3 cut(s) | 295, 496, 502 |
| Kzo9I | GATC | 5 cut(s) | 250, 556, 643, 799, 1308 |
| LmnI | GCTCC | 4 cut(s) | 94, 369, 415, 953 |
| Lsp1109I | GCAGC | 5 cut(s) | 99, 137, 553, 556, 604 |
| LweI | GCATC | 3 cut(s) | 496, 724, 896 |
| MaeI | CTAG | 1 cut(s) | 134 |
| MaeII | ACGT | 1 cut(s) | 570 |
| MaeIII | GTNAC | 2 cut(s) | 571, 1225 |
| MalI | GATC | 5 cut(s) | 252, 558, 645, 801, 1310 |
| MbiI | CCGCTC | 1 cut(s) | 131 |
| MboI | GATC | 5 cut(s) | 250, 556, 643, 799, 1308 |
| MfeI | CAATTG | 2 cut(s) | 438, 1004 |
| MhlI | GDGCHC | 3 cut(s) | 366, 420, 819 |
| MlsI | TGGCCA | 1 cut(s) | 394 |
| MluCI | AATT | 7 cut(s) | 438, 742, 768, 847, 1004, 1111, 1339 |
| MluNI | TGGCCA | 1 cut(s) | 394 |
| MlyI | GAGTC | 2 cut(s) | 508, 1053 |
| MmeI | TCCRAC | 1 cut(s) | 1272 |
| Mox20I | TGGCCA | 1 cut(s) | 394 |
| MroXI | GAANNNNTTC | 1 cut(s) | 333 |
| MscI | TGGCCA | 1 cut(s) | 394 |
| MseI | TTAA | 5 cut(s) | 897, 990, 1071, 1233, 1290 |
| Msp20I | TGGCCA | 1 cut(s) | 394 |
| MspA1I | CMGCKG | 2 cut(s) | 112, 617 |
| MspI | CCGG | 3 cut(s) | 510, 1104, 1333 |
| MspR9I | CCNGG | 3 cut(s) | 511, 1105, 1214 |
| MssI | GTTTAAAC | 1 cut(s) | 991 |
| MunI | CAATTG | 2 cut(s) | 438, 1004 |
| MvaI | CCWGG | 1 cut(s) | 1214 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 95, 125, 301, 391, 493, 658, 814 |
| NciI | CCSGG | 2 cut(s) | 511, 1105 |
| NdeII | GATC | 5 cut(s) | 250, 556, 643, 799, 1308 |
| NlaIII | CATG | 3 cut(s) | 414, 595, 704 |
| NlaIV | GGNNCC | 2 cut(s) | 350, 417 |
| NmeAIII | GCCGAG | 1 cut(s) | 334 |
| NmuCI | GTSAC | 2 cut(s) | 571, 1225 |
| NspI | RCATGY | 1 cut(s) | 704 |
| PdmI | GAANNNNTTC | 1 cut(s) | 333 |
| PfeI | GAWTC | 1 cut(s) | 1139 |
| PfoI | TCCNGGA | 2 cut(s) | 509, 1212 |
| PkrI | GCNGC | 6 cut(s) | 114, 127, 130, 543, 546, 619 |
| PleI | GAGTC | 2 cut(s) | 508, 1052 |
| PmeI | GTTTAAAC | 1 cut(s) | 991 |
| PpsI | GAGTC | 2 cut(s) | 508, 1052 |
| Psp124BI | GAGCTC | 2 cut(s) | 366, 819 |
| Psp6I | CCWGG | 1 cut(s) | 1212 |
| PspGI | CCWGG | 1 cut(s) | 1212 |
| PspN4I | GGNNCC | 2 cut(s) | 350, 417 |
| PspPI | GGNCC | 2 cut(s) | 349, 1245 |
| PstNI | CAGNNNCTG | 1 cut(s) | 401 |
| PvuII | CAGCTG | 1 cut(s) | 112 |
| RsaI | GTAC | 3 cut(s) | 867, 933, 1337 |
| RsaNI | GTAC | 3 cut(s) | 866, 932, 1336 |
| SacI | GAGCTC | 2 cut(s) | 366, 819 |
| SalI | GTCGAC | 1 cut(s) | 914 |
| SaqAI | TTAA | 5 cut(s) | 897, 990, 1071, 1233, 1290 |
| SatI | GCNGC | 6 cut(s) | 113, 126, 129, 542, 545, 618 |
| Sau3AI | GATC | 5 cut(s) | 250, 556, 643, 799, 1308 |
| Sau96I | GGNCC | 2 cut(s) | 349, 1245 |
| SchI | GAGTC | 2 cut(s) | 508, 1053 |
| ScrFI | CCNGG | 3 cut(s) | 511, 1105, 1214 |
| SduI | GDGCHC | 3 cut(s) | 366, 420, 819 |
| SfaNI | GCATC | 3 cut(s) | 496, 724, 896 |
| SinI | GGWCC | 2 cut(s) | 349, 1245 |
| SmlI | CTYRAG | 2 cut(s) | 174, 1283 |
| SmoI | CTYRAG | 2 cut(s) | 174, 1283 |
| Sse9I | AATT | 7 cut(s) | 438, 742, 768, 847, 1004, 1111, 1339 |
| SsiI | CCGC | 3 cut(s) | 129, 352, 615 |
| SspI | AATATT | 1 cut(s) | 841 |
| SspMI | CTAG | 1 cut(s) | 134 |
| SstI | GAGCTC | 2 cut(s) | 366, 819 |
| StyD4I | CCNGG | 3 cut(s) | 509, 1103, 1212 |
| StyI | CCWWGG | 2 cut(s) | 420, 909 |
| TaaI | ACNGT | 1 cut(s) | 920 |
| TaiI | ACGT | 1 cut(s) | 573 |
| TaqI | TCGA | 5 cut(s) | 183, 327, 453, 915, 1311 |
| TasI | AATT | 7 cut(s) | 438, 742, 768, 847, 1004, 1111, 1339 |
| TatI | WGTACW | 2 cut(s) | 865, 931 |
| TauI | GCSGC | 1 cut(s) | 131 |
| TfiI | GAWTC | 1 cut(s) | 1139 |
| Tru1I | TTAA | 5 cut(s) | 897, 990, 1071, 1233, 1290 |
| Tru9I | TTAA | 5 cut(s) | 897, 990, 1071, 1233, 1290 |
| TscAI | CASTG | 2 cut(s) | 1054, 1158 |
| TseFI | GTSAC | 2 cut(s) | 571, 1225 |
| TseI | GCWGC | 5 cut(s) | 112, 125, 541, 544, 617 |
| Tsp45I | GTSAC | 2 cut(s) | 571, 1225 |
| TspDTI | ATGAA | 2 cut(s) | 17, 1152 |
| TspGWI | ACGGA | 1 cut(s) | 1266 |
| TspRI | CASTG | 2 cut(s) | 1054, 1158 |
| VpaK11BI | GGWCC | 2 cut(s) | 349, 1245 |
| XapI | RAATTY | 1 cut(s) | 1111 |
| XbaI | TCTAGA | 1 cut(s) | 133 |
| XceI | RCATGY | 1 cut(s) | 704 |
| XmiI | GTMKAC | 1 cut(s) | 915 |
| XmnI | GAANNNNTTC | 1 cut(s) | 333 |
| XspI | CTAG | 1 cut(s) | 134 |