Rh1AG176600

Chromo domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0007358
Physical Location & Seq
Reverse (-)
33697940 .. 33703760
5821 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG176600.1

Sequence Viewer

Length: 1347 bp
ATGAGAGTGAAAGGAGGAGGGAGGAAGAAAAGCTGGGAAGCAATGCCTGTAGACGACGGGGGTCTGCTTTTTCAAGACACGGACCCAAACGACGCCGCTTTTGCTGTACCGGTAAACCAAGTCACTGAGCCACAGCCGGAAATTGAGCCGGAGAAAAACCAAAACCACGAGGAGGCTCAGGCCGCGGAGGACGGTGACGGCGAGGGGGAAGAGGGGGAGGGGGAGGAAGGGGAAGAAGAGGCTGAGGCCGAGGATGAGAATAAGGAGAGGAGTACTAAGCTTGATGACGGTTTCTATGAAATCGAAGCCATTCGCCGCAAAAGGGTTCGAAAGGGTCAGCTGCAGTATCTCATCAAATGGCGTGGCTGGCCAGAGACAGCCAATACATGGGAACCCTTGGAGAACCTCCAGTCTGTCTCTGATGTTATAGATGCATTTGAAGAAAGCTTGCGTACTGGAAAGCAACGGAAGCGAAAGCGCAAGTCTGGGACTCCTCATACTCAACCTAAGAAGAAGCAGCAGCAGCAGCGTTCTACAGACACTACCTACAATGTGACAGATGGGGAAATAAGCAATGCTGACAAAGCTTTATCATCTAGTGCTCTCAATGGCTCAGGGGTTGATGTTCTTCCTCCCCCTCAACAGATTTTCCAGTCAGTTGGTGATGGAGAGGATAATGGGCGTGTCAACAATACTGAAACAGCAAAGAAAATTGATTCTGAGAACTTTTGTGCAAATGGTTCCCAACAAATTAGTGAAAGGAGAGAGGAAAATGAGTATGATCCAAAACTTAGTGAGCTCAAAGCAACAGGATCTACTAACACTGTCAGTTCAGATAAACTCTCTGTACATTTCCAAGAAGCCAAAGCTCCGGAAGTTAATGGCCCTACAAATGGTCTTTCCAAGGTTGATTGTGGAGAACCAGTACAGGGCAGTCGCAGTACTGGAGCTAAGAGAAGGAAGTCTGGTTCTGTGAAGAGGTTTAAACAAGAAGCACAAGTGTCTGAACTGGGTGCTACACAAAATGCCCCAACTCGAGTTAGCACGAGATATGCTGGTAGAGTTGATCAAACTGGGGTAGAAAATCTTGATTATGCTGGGGAAAATTCAGGTCGCAAGAATAAGATTGATGAATGCAAAGAAGCAGTGCGCATCACCAAGATTCTCAAGCCAATGGGCTATTCAACTTCGATATCAAACAATGTCCAGGACGTGTCCGTTACCTTTATGGCCATGAGGTCTGATGGCACAGAAGTGATAGTGGATAACAAATTTCTCAAGGTCAATCATCCACTTCTGCTGATTAATTTCTATGAGCAACATCTCCGGTACAGTCCTGCTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000228 GO:0000785 GO:0000790 GO:0000791 GO:0000792 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003824 GO:0003933 GO:0003935 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005720 GO:0005737 GO:0006325 GO:0006342 GO:0006355 GO:0006950 GO:0006996 GO:0007275 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009648 GO:0009653 GO:0009791 GO:0009825 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009910 GO:0009987 GO:0010016 GO:0010048 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016049 GO:0016458 GO:0016787 GO:0016810 GO:0016814 GO:0019219 GO:0019222 GO:0019238 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0035064 GO:0040007 GO:0040029 GO:0040030 GO:0042393 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044092 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0045814 GO:0045857 GO:0045892 GO:0045934 GO:0048367 GO:0048519 GO:0048523 GO:0048573 GO:0048580 GO:0048581 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0065009 GO:0070013 GO:0071840 GO:0080090 GO:0097159 GO:0140030 GO:0140034 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Chromo

Protein Analysis

448

Amino Acids

49.64

Weight (kDa)

5.17

Isoelectric Point (pI)

48.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Chromo PF00385 99 - 148 6.7e-17 Chromo (CHRromatin Organisation MOdifier) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1151
AccB7I CCANNNNNTGG 1 cut(s) 387
AccI GTMKAC 1 cut(s) 51
AccII CGCG 1 cut(s) 185
AccIII TCCGGA 1 cut(s) 871
AciI CCGC 4 cut(s) 96, 183, 185, 316
AclWI GGATC 2 cut(s) 776, 820
AcoI YGGCCR 2 cut(s) 368, 1230
AcsI RAATTY 2 cut(s) 1105, 1271
AcyI GRCGYC 1 cut(s) 93
AfaI GTAC 7 cut(s) 108, 274, 454, 849, 927, 943, 1331
AfiI CCNNNNNNNGG 5 cut(s) 172, 322, 387, 893, 929
AflIII ACRYGT 1 cut(s) 1212
AgeI ACCGGT 1 cut(s) 109
AgsI TTSAA 3 cut(s) 74, 440, 1185
AjiI CACGTC 1 cut(s) 1213
AjnI CCWGG 1 cut(s) 1206
AjuI GAANNNNNNNTTGG 2 cut(s) 1165, 1197
AleI CACNNNNGTG 1 cut(s) 1253
AloI GAACNNNNNNTCC 2 cut(s) 952, 984
AluBI AGCT 8 cut(s) 33, 280, 340, 447, 587, 799, 869, 950
AluI AGCT 8 cut(s) 33, 280, 340, 447, 587, 799, 869, 950
Alw21I GWGCWC 2 cut(s) 604, 801
Alw26I GTCTC 2 cut(s) 368, 421
AlwI GGATC 2 cut(s) 776, 820
Ama87I CYCGRG 1 cut(s) 1035
Aor13HI TCCGGA 1 cut(s) 871
AoxI GGCC 5 cut(s) 180, 246, 368, 883, 1230
ApeKI GCWGC 5 cut(s) 340, 517, 520, 523, 526
ApoI RAATTY 2 cut(s) 1105, 1271
ArsI GACNNNNNNTTYG 2 cut(s) 83, 115
AseI ATTAAT 1 cut(s) 1305
AsiGI ACCGGT 1 cut(s) 109
Asp700I GAANNNNTTC 1 cut(s) 309
AspLEI GCGC 2 cut(s) 480, 1152
AspS9I GGNCC 2 cut(s) 82, 884
AsuHPI GGTGA 3 cut(s) 206, 674, 1147
AsuII TTCGAA 1 cut(s) 328
AvaI CYCGRG 1 cut(s) 1035
AvaII GGWCC 1 cut(s) 82
BalI TGGCCA 2 cut(s) 370, 1232
BanII GRGCYC 1 cut(s) 801
BauI CACGAG 2 cut(s) 167, 1045
Bbv12I GWGCWC 2 cut(s) 604, 801
BbvCI CCTCAGC 1 cut(s) 243
BbvI GCAGC 5 cut(s) 327, 529, 532, 535, 538
BccI CCATC 3 cut(s) 554, 659, 1238
BceAI ACGGC 1 cut(s) 214
BciT130I CCWGG 1 cut(s) 1208
BclI TGATCA 1 cut(s) 1066
BcoDI GTCTC 2 cut(s) 368, 421
BfaI CTAG 1 cut(s) 597
BfmI CTRYAG 3 cut(s) 48, 341, 534
BisI GCNGC 8 cut(s) 96, 183, 316, 341, 518, 521, 524, 527
BlsI GCNGC 8 cut(s) 97, 184, 317, 342, 519, 522, 525, 528
BmcAI AGTACT 2 cut(s) 274, 943
Bme1390I CCNGG 1 cut(s) 1208
Bme18I GGWCC 1 cut(s) 82
BmeT110I CYCGRG 1 cut(s) 1035
BmgBI CACGTC 1 cut(s) 1213
BmgT120I GGNCC 2 cut(s) 82, 884
BmiI GGNNCC 3 cut(s) 84, 393, 742
BmrFI CCNGG 1 cut(s) 1208
BmrI ACTGGG 2 cut(s) 1019, 1083
BmsI GCATC 2 cut(s) 421, 1161
BmuI ACTGGG 2 cut(s) 1019, 1083
BoxI GACNNNNGTC 1 cut(s) 60
BpmI CTGGAG 2 cut(s) 392, 966
Bpu10I CCTNAGC 3 cut(s) 177, 243, 613
Bpu14I TTCGAA 1 cut(s) 328
BpuEI CTTGAG 2 cut(s) 1151, 1262
BsaHI GRCGYC 1 cut(s) 93
BsaJI CCNNGG 4 cut(s) 183, 249, 396, 903
BsaWI WCCGGW 3 cut(s) 109, 871, 1326
BsaXI ACNNNNNCTCC 2 cut(s) 909, 939
Bsc4I CCNNNNNNNGG 5 cut(s) 172, 322, 387, 893, 929
Bse118I RCCGGY 1 cut(s) 109
Bse1I ACTGG 7 cut(s) 409, 460, 652, 923, 949, 1014, 1078
Bse3DI GCAATG 2 cut(s) 48, 580
BseAI TCCGGA 1 cut(s) 871
BseBI CCWGG 1 cut(s) 1208
BseDI CCNNGG 4 cut(s) 183, 249, 396, 903
BseGI GGATG 2 cut(s) 259, 1288
BseLI CCNNNNNNNGG 5 cut(s) 172, 322, 387, 893, 929
BseMI GCAATG 2 cut(s) 48, 580
BseMII CTCAG 5 cut(s) 117, 191, 234, 627, 711
BseNI ACTGG 7 cut(s) 409, 460, 652, 923, 949, 1014, 1078
BseRI GAGGAG 4 cut(s) 30, 185, 283, 483
BseXI GCAGC 5 cut(s) 327, 529, 532, 535, 538
BseYI CCCAGC 2 cut(s) 33, 1097
Bsh1236I CGCG 1 cut(s) 185
BshFI GGCC 5 cut(s) 182, 248, 370, 885, 1232
BshTI ACCGGT 1 cut(s) 109
BsiHKAI GWGCWC 2 cut(s) 604, 801
BsiHKCI CYCGRG 1 cut(s) 1035
BsiSI CCGG 5 cut(s) 110, 137, 149, 872, 1327
BslFI GGGAC 1 cut(s) 502
BslI CCNNNNNNNGG 5 cut(s) 172, 322, 387, 893, 929
BsmAI GTCTC 2 cut(s) 368, 421
BsmFI GGGAC 1 cut(s) 502
BsmI GAATGC 1 cut(s) 1139
BsnI GGCC 5 cut(s) 182, 248, 370, 885, 1232
BsoBI CYCGRG 1 cut(s) 1035
Bsp119I TTCGAA 1 cut(s) 328
Bsp1286I GDGCHC 2 cut(s) 604, 801
Bsp13I TCCGGA 1 cut(s) 871
Bsp1407I TGTACA 1 cut(s) 847
Bsp143I GATC 3 cut(s) 781, 812, 1066
BspACI CCGC 4 cut(s) 96, 183, 185, 316
BspANI GGCC 5 cut(s) 182, 248, 370, 885, 1232
BspCNI CTCAG 5 cut(s) 118, 190, 235, 626, 712
BspEI TCCGGA 1 cut(s) 871
BspFNI CGCG 1 cut(s) 185
BspLI GGNNCC 3 cut(s) 84, 393, 742
BspMAI CTGCAG 1 cut(s) 345
BspPI GGATC 2 cut(s) 776, 820
BspT104I TTCGAA 1 cut(s) 328
BsrDI GCAATG 2 cut(s) 48, 580
BsrFI RCCGGY 1 cut(s) 109
BsrGI TGTACA 1 cut(s) 847
BsrI ACTGG 7 cut(s) 409, 460, 652, 923, 949, 1014, 1078
BssAI RCCGGY 1 cut(s) 109
BssECI CCNNGG 4 cut(s) 183, 249, 396, 903
BssMI GATC 3 cut(s) 781, 812, 1066
BssNI GRCGYC 1 cut(s) 93
BssSI CACGAG 2 cut(s) 167, 1045
BssT1I CCWWGG 2 cut(s) 396, 903
Bst2BI CACGAG 2 cut(s) 167, 1045
Bst2UI CCWGG 1 cut(s) 1208
Bst4CI ACNGT 4 cut(s) 194, 290, 826, 1334
Bst6I CTCTTC 3 cut(s) 204, 231, 971
BstACI GRCGYC 1 cut(s) 93
BstAUI TGTACA 1 cut(s) 847
BstBI TTCGAA 1 cut(s) 328
BstC8I GCNNGC 2 cut(s) 368, 449
BstDEI CTNAG 9 cut(s) 126, 177, 243, 276, 507, 613, 720, 791, 951
BstDSI CCRYGG 1 cut(s) 183
BstF5I GGATG 2 cut(s) 259, 1288
BstFNI CGCG 1 cut(s) 185
BstHHI GCGC 2 cut(s) 480, 1152
BstKTI GATC 3 cut(s) 784, 815, 1069
BstMAI GTCTC 2 cut(s) 368, 421
BstMBI GATC 3 cut(s) 781, 812, 1066
BstMWI GCNNNNNNNGC 7 cut(s) 101, 182, 367, 469, 523, 526, 584
BstNI CCWGG 1 cut(s) 1208
BstPAI GACNNNNGTC 1 cut(s) 60
BstSCI CCNGG 1 cut(s) 1206
BstSFI CTRYAG 3 cut(s) 48, 341, 534
BstUI CGCG 1 cut(s) 185
BstV1I GCAGC 5 cut(s) 327, 529, 532, 535, 538
BstX2I RGATCY 1 cut(s) 812
BstXI CCANNNNNNTGG 1 cut(s) 659
BstYI RGATCY 1 cut(s) 812
BsuRI GGCC 5 cut(s) 182, 248, 370, 885, 1232
BtgI CCRYGG 1 cut(s) 183
BtrI CACGTC 1 cut(s) 1213
BtsCI GGATG 2 cut(s) 259, 1288
BtsI GCAGTG 1 cut(s) 1152
BtsIMutI CAGTG 3 cut(s) 123, 822, 1152
Cac8I GCNNGC 2 cut(s) 368, 449
CfoI GCGC 2 cut(s) 480, 1152
Cfr10I RCCGGY 1 cut(s) 109
Cfr13I GGNCC 2 cut(s) 82, 884
Cfr42I CCGCGG 1 cut(s) 186
CseI GACGC 1 cut(s) 101
Csp6I GTAC 7 cut(s) 107, 273, 453, 848, 926, 942, 1330
CspAI ACCGGT 1 cut(s) 109
CspCI CAANNNNNGTGG 2 cut(s) 343, 378
CviAII CATG 2 cut(s) 387, 1234
CviQI GTAC 7 cut(s) 107, 273, 453, 848, 926, 942, 1330
DdeI CTNAG 9 cut(s) 126, 177, 243, 276, 507, 613, 720, 791, 951
DpnI GATC 3 cut(s) 783, 814, 1068
DpnII GATC 3 cut(s) 781, 812, 1066
DraI TTTAAA 1 cut(s) 985
EaeI YGGCCR 2 cut(s) 368, 1230
Eam1104I CTCTTC 3 cut(s) 204, 231, 971
EarI CTCTTC 3 cut(s) 204, 231, 971
Ecl136II GAGCTC 1 cut(s) 799
Eco130I CCWWGG 2 cut(s) 396, 903
Eco24I GRGCYC 1 cut(s) 801
Eco32I GATATC 1 cut(s) 1194
Eco47I GGWCC 1 cut(s) 82
Eco53kI GAGCTC 1 cut(s) 799
Eco88I CYCGRG 1 cut(s) 1035
EcoICRI GAGCTC 1 cut(s) 799
EcoRII CCWGG 1 cut(s) 1206
EcoRV GATATC 1 cut(s) 1194
EcoT14I CCWWGG 2 cut(s) 396, 903
EcoT22I ATGCAT 1 cut(s) 436
EcoT38I GRGCYC 1 cut(s) 801
ErhI CCWWGG 2 cut(s) 396, 903
FaeI CATG 2 cut(s) 390, 1237
FaqI GGGAC 1 cut(s) 502
FatI CATG 2 cut(s) 386, 1233
FbaI TGATCA 1 cut(s) 1066
FblI GTMKAC 1 cut(s) 51
Fnu4HI GCNGC 8 cut(s) 96, 183, 316, 341, 518, 521, 524, 527
FokI GGATG 2 cut(s) 266, 1275
FriOI GRGCYC 1 cut(s) 801
Fsp4HI GCNGC 8 cut(s) 96, 183, 316, 341, 518, 521, 524, 527
FspAI RTGCGCAY 1 cut(s) 1151
FspBI CTAG 1 cut(s) 597
FspI TGCGCA 1 cut(s) 1151
GlaI GCGC 2 cut(s) 479, 1151
GluI GCNGC 8 cut(s) 96, 183, 316, 341, 518, 521, 524, 527
GsaI CCCAGC 2 cut(s) 37, 1101
GsuI CTGGAG 2 cut(s) 392, 966
HaeIII GGCC 5 cut(s) 182, 248, 370, 885, 1232
HapII CCGG 5 cut(s) 110, 137, 149, 872, 1327
HgaI GACGC 1 cut(s) 101
HhaI GCGC 2 cut(s) 480, 1152
Hin1I GRCGYC 1 cut(s) 93
Hin1II CATG 2 cut(s) 390, 1237
Hin6I GCGC 2 cut(s) 478, 1150
HinP1I GCGC 2 cut(s) 478, 1150
HincII GTYRAC 1 cut(s) 688
HindII GTYRAC 1 cut(s) 688
HindIII AAGCTT 3 cut(s) 278, 445, 585
HinfI GANTC 3 cut(s) 490, 716, 1162
HpaII CCGG 5 cut(s) 110, 137, 149, 872, 1327
HphI GGTGA 3 cut(s) 206, 674, 1147
Hpy166II GTNNAC 3 cut(s) 52, 115, 688
Hpy188I TCNGA 5 cut(s) 421, 721, 835, 1006, 1243
Hpy188III TCNNGA 3 cut(s) 74, 872, 1088
Hpy8I GTNNAC 3 cut(s) 52, 115, 688
Hpy99I CGWCG 2 cut(s) 59, 95
HpyAV CCTTC 2 cut(s) 221, 951
HpyCH4III ACNGT 4 cut(s) 194, 290, 826, 1334
HpyCH4IV ACGT 1 cut(s) 1212
HpyCH4V TGCA 4 cut(s) 343, 434, 734, 1137
HpyF10VI GCNNNNNNNGC 7 cut(s) 101, 182, 367, 469, 523, 526, 584
HpyF3I CTNAG 9 cut(s) 126, 177, 243, 276, 507, 613, 720, 791, 951
HpySE526I ACGT 1 cut(s) 1212
Hsp92I GRCGYC 1 cut(s) 93
Hsp92II CATG 2 cut(s) 390, 1237
HspAI GCGC 2 cut(s) 478, 1150
Kpn2I TCCGGA 1 cut(s) 871
Ksp22I TGATCA 1 cut(s) 1066
KspI CCGCGG 1 cut(s) 186
Kzo9I GATC 3 cut(s) 781, 812, 1066
LmnI GCTCC 2 cut(s) 874, 947
Lsp1109I GCAGC 5 cut(s) 327, 529, 532, 535, 538
LweI GCATC 2 cut(s) 421, 1161
MaeI CTAG 1 cut(s) 597
MaeII ACGT 1 cut(s) 1212
MaeIII GTNAC 4 cut(s) 121, 194, 553, 1219
MalI GATC 3 cut(s) 783, 814, 1068
MboI GATC 3 cut(s) 781, 812, 1066
MboII GAAGA 8 cut(s) 37, 221, 245, 248, 452, 523, 620, 988
MflI RGATCY 1 cut(s) 812
MhlI GDGCHC 2 cut(s) 604, 801
MlsI TGGCCA 2 cut(s) 370, 1232
MluCI AATT 6 cut(s) 141, 711, 750, 1105, 1271, 1306
MluNI TGGCCA 2 cut(s) 370, 1232
MlyI GAGTC 1 cut(s) 484
Mox20I TGGCCA 2 cut(s) 370, 1232
Mph1103I ATGCAT 1 cut(s) 436
MroI TCCGGA 1 cut(s) 871
MroXI GAANNNNTTC 1 cut(s) 309
MscI TGGCCA 2 cut(s) 370, 1232
MseI TTAA 3 cut(s) 879, 984, 1305
MslI CAYNNNNRTG 1 cut(s) 1253
Msp20I TGGCCA 2 cut(s) 370, 1232
MspA1I CMGCKG 2 cut(s) 185, 340
MspI CCGG 5 cut(s) 110, 137, 149, 872, 1327
MspR9I CCNGG 1 cut(s) 1208
MssI GTTTAAAC 1 cut(s) 985
Mva1269I GAATGC 1 cut(s) 1139
MvaI CCWGG 1 cut(s) 1208
MvnI CGCG 1 cut(s) 185
MwoI GCNNNNNNNGC 7 cut(s) 101, 182, 367, 469, 523, 526, 584
NdeII GATC 3 cut(s) 781, 812, 1066
NlaIII CATG 2 cut(s) 390, 1237
NlaIV GGNNCC 3 cut(s) 84, 393, 742
NmeAIII GCCGAG 1 cut(s) 274
NmuCI GTSAC 3 cut(s) 121, 194, 553
NsbI TGCGCA 1 cut(s) 1151
NsiI ATGCAT 1 cut(s) 436
NspV TTCGAA 1 cut(s) 328
OliI CACNNNNGTG 1 cut(s) 1253
PaeR7I CTCGAG 1 cut(s) 1035
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PctI GAATGC 1 cut(s) 1139
PdmI GAANNNNTTC 1 cut(s) 309
PfeI GAWTC 2 cut(s) 716, 1162
PflMI CCANNNNNTGG 1 cut(s) 387
PfoI TCCNGGA 1 cut(s) 1206
PinAI ACCGGT 1 cut(s) 109
PkrI GCNGC 8 cut(s) 97, 184, 317, 342, 519, 522, 525, 528
PleI GAGTC 1 cut(s) 484
PmeI GTTTAAAC 1 cut(s) 985
PpsI GAGTC 1 cut(s) 484
PshAI GACNNNNGTC 1 cut(s) 60
PshBI ATTAAT 1 cut(s) 1305
Psp124BI GAGCTC 1 cut(s) 801
Psp6I CCWGG 1 cut(s) 1206
PspFI CCCAGC 2 cut(s) 33, 1097
PspGI CCWGG 1 cut(s) 1206
PspN4I GGNNCC 3 cut(s) 84, 393, 742
PspPI GGNCC 2 cut(s) 82, 884
PspXI VCTCGAGB 1 cut(s) 1035
PstI CTGCAG 1 cut(s) 345
PsuI RGATCY 1 cut(s) 812
PvuII CAGCTG 1 cut(s) 340
RsaI GTAC 7 cut(s) 108, 274, 454, 849, 927, 943, 1331
RsaNI GTAC 7 cut(s) 107, 273, 453, 848, 926, 942, 1330
RseI CAYNNNNRTG 1 cut(s) 1253
SacI GAGCTC 1 cut(s) 801
SacII CCGCGG 1 cut(s) 186
SaqAI TTAA 3 cut(s) 879, 984, 1305
SatI GCNGC 8 cut(s) 96, 183, 316, 341, 518, 521, 524, 527
Sau3AI GATC 3 cut(s) 781, 812, 1066
Sau96I GGNCC 2 cut(s) 82, 884
ScaI AGTACT 2 cut(s) 274, 943
SchI GAGTC 1 cut(s) 484
ScrFI CCNGG 1 cut(s) 1208
SduI GDGCHC 2 cut(s) 604, 801
SfaNI GCATC 2 cut(s) 421, 1161
SfcI CTRYAG 3 cut(s) 48, 341, 534
Sfr274I CTCGAG 1 cut(s) 1035
Sfr303I CCGCGG 1 cut(s) 186
SfuI TTCGAA 1 cut(s) 328
SgrBI CCGCGG 1 cut(s) 186
SinI GGWCC 1 cut(s) 82
SlaI CTCGAG 1 cut(s) 1035
SmiMI CAYNNNNRTG 1 cut(s) 1253
SmlI CTYRAG 3 cut(s) 1035, 1166, 1277
SmoI CTYRAG 3 cut(s) 1035, 1166, 1277
Sse9I AATT 6 cut(s) 141, 711, 750, 1105, 1271, 1306
SsiI CCGC 4 cut(s) 96, 183, 185, 316
SspMI CTAG 1 cut(s) 597
SstI GAGCTC 1 cut(s) 801
StyD4I CCNGG 1 cut(s) 1206
StyI CCWWGG 2 cut(s) 396, 903
TaaI ACNGT 4 cut(s) 194, 290, 826, 1334
TaiI ACGT 1 cut(s) 1215
TaqI TCGA 4 cut(s) 303, 328, 1036, 1190
TasI AATT 6 cut(s) 141, 711, 750, 1105, 1271, 1306
TatI WGTACW 4 cut(s) 272, 847, 925, 941
TauI GCSGC 3 cut(s) 98, 185, 318
TfiI GAWTC 2 cut(s) 716, 1162
Tru1I TTAA 3 cut(s) 879, 984, 1305
Tru9I TTAA 3 cut(s) 879, 984, 1305
TscAI CASTG 3 cut(s) 130, 829, 1152
TseFI GTSAC 3 cut(s) 121, 194, 553
TseI GCWGC 5 cut(s) 340, 517, 520, 523, 526
Tsp45I GTSAC 3 cut(s) 121, 194, 553
TspDTI ATGAA 2 cut(s) 312, 1146
TspGWI ACGGA 3 cut(s) 95, 481, 1207
TspRI CASTG 3 cut(s) 130, 829, 1152
Van91I CCANNNNNTGG 1 cut(s) 387
VpaK11BI GGWCC 1 cut(s) 82
VspI ATTAAT 1 cut(s) 1305
XapI RAATTY 2 cut(s) 1105, 1271
XhoI CTCGAG 1 cut(s) 1035
XmiI GTMKAC 1 cut(s) 51
XmnI GAANNNNTTC 1 cut(s) 309
XspI CTAG 1 cut(s) 597
ZrmI AGTACT 2 cut(s) 274, 943
Zsp2I ATGCAT 1 cut(s) 436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.