RchiOBHm_Chr1g0340791

Chromo domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0007358
Physical Location & Seq
Forward (+)
32379371 .. 32385189
5819 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56755

Sequence Viewer

Length: 1344 bp
ATGAGAGTGAAAGGAGGAGGGAGGAAGAAAAGCTGGGAAGCAATGCCTGTAGACGACGGGGGTCTGCTTTTTCAAGACACGGACCCAAACGACGCCGCTTTTGCTGTACCTGTAAACCAAGTCACTGAGCCACAGCCGGAAATTGAGCAGGAGAAAAACCAAAACCACGAGGAGGCTCAGGCCGCGGAGGACGGTGACGGCGAGGGGGAAGAGGGGGAGGGGGAGGAAGGGGAAGAAGAGGCTGAGGCCGAGGATGAGAATAAGGAGAGGAGTACTAAGCTTGATGACGGTTTCTATGAAATCGAAGCCATTCGCCGCAAAAGGGTTCGAAAGGGTCAGCTGCAGTATCTCATCAAATGGCGTGGCTGGCCAGAGACAGCCAATACATGGGAACCCTTGGAGAACCTCCAGTCTGTCTCTGATGTTATAGATGCATTTGAAGAAAGCTTGCGTACTGGAAAGCAACGGAAGCGAAAGCGCAAGTCTGGGACTCCTCATACTCAACCTAAGAAGAAGCAGCAGCAGCGTTCTACAGACACTACCTACAATGTGACAGATGGGGAAATAAGCAATGCTGATAAAGCTTTATCATCTAGTGCTCTCAATGGCTCAGGGGTTGATGTTCTTCCTCCCCCTCAACAGATTTTCCAGTCAGTTGGTGATGGAGAGGATAATGGGCGTGTCAACAATACTGAAACAGCAAAGAAAATTGATTCTGAGAACTTTTGTGCAAATGGTTCCCAACAAATTAGTGAAAGGAGAGAGGAAAATGAGTATGATCCAAAACTTAGTGAGCTCAAAGCAACAGGATCTACTAACACTGTCAGTTCAGATAAACTCTCTGTACATTTCCAAGAAGCCAAAGCTCCGGAAGTTAATGGCCCTACAAATGGTCTTTCCAAGGTTGATTGTGGAGAACCAGTACAGGGCAGTCGCAGTACTGGAGCTAAGAGAAGGAAGTCTGGTTCTGTGAAGAGGTTTAAACAAGAAGCACAAGTGTCTGAACAGGGTGCTACACAAAATGCCCCAACTCGAGTTAGCACGAGATATGCTGGTAGAGTTGATCAAACTGGGGTAGAAAATCTTGATTATGCTGGGGAAAATTCAGGTCGCAAGAATAAGATTGATGAATGCAAAGAAGCAGTGCGCATCACCAAGATTCTCAAGCCAATGGGCTATTCAACTTCGATATCAAACAATGTCCAGGACGTGTCCGTTACCTTTATGGCCATGAGGTCTGATGGCACAGAAGTGATAGTGGATAACAAATTTCTCAAGGTCAATCATCCACTTCTGCTGATTAATTTCTATGAGCAACATCTCCGGTACAGTCCTGCTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000228 GO:0000785 GO:0000790 GO:0000791 GO:0000792 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003824 GO:0003933 GO:0003935 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005720 GO:0005737 GO:0006325 GO:0006342 GO:0006355 GO:0006950 GO:0006996 GO:0007275 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009648 GO:0009653 GO:0009791 GO:0009825 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009910 GO:0009987 GO:0010016 GO:0010048 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016049 GO:0016458 GO:0016787 GO:0016810 GO:0016814 GO:0019219 GO:0019222 GO:0019238 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0035064 GO:0040007 GO:0040029 GO:0040030 GO:0042393 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044092 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0045814 GO:0045857 GO:0045892 GO:0045934 GO:0048367 GO:0048519 GO:0048523 GO:0048573 GO:0048580 GO:0048581 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0065009 GO:0070013 GO:0071840 GO:0080090 GO:0097159 GO:0140030 GO:0140034 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Chromo

Protein Analysis

447

Amino Acids

49.56

Weight (kDa)

5.17

Isoelectric Point (pI)

48.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Chromo PF00385 99 - 148 6.7e-17 Chromo (CHRromatin Organisation MOdifier) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1148
AccB7I CCANNNNNTGG 1 cut(s) 387
AccI GTMKAC 1 cut(s) 51
AccII CGCG 1 cut(s) 185
AccIII TCCGGA 1 cut(s) 868
AciI CCGC 4 cut(s) 96, 183, 185, 316
AclWI GGATC 2 cut(s) 773, 817
AcoI YGGCCR 2 cut(s) 368, 1227
AcsI RAATTY 2 cut(s) 1102, 1268
AcyI GRCGYC 1 cut(s) 93
AfaI GTAC 7 cut(s) 108, 274, 454, 846, 924, 940, 1328
AfiI CCNNNNNNNGG 5 cut(s) 172, 322, 387, 890, 926
AflIII ACRYGT 1 cut(s) 1209
AgsI TTSAA 3 cut(s) 74, 440, 1182
AjiI CACGTC 1 cut(s) 1210
AjnI CCWGG 1 cut(s) 1203
AjuI GAANNNNNNNTTGG 2 cut(s) 1162, 1194
AleI CACNNNNGTG 1 cut(s) 1250
AloI GAACNNNNNNTCC 2 cut(s) 949, 981
AluBI AGCT 8 cut(s) 33, 280, 340, 447, 584, 796, 866, 947
AluI AGCT 8 cut(s) 33, 280, 340, 447, 584, 796, 866, 947
Alw21I GWGCWC 2 cut(s) 601, 798
Alw26I GTCTC 2 cut(s) 368, 421
AlwI GGATC 2 cut(s) 773, 817
Ama87I CYCGRG 1 cut(s) 1032
Aor13HI TCCGGA 1 cut(s) 868
AoxI GGCC 5 cut(s) 180, 246, 368, 880, 1227
ApeKI GCWGC 4 cut(s) 340, 517, 520, 523
ApoI RAATTY 2 cut(s) 1102, 1268
ArsI GACNNNNNNTTYG 2 cut(s) 83, 115
AseI ATTAAT 1 cut(s) 1302
Asp700I GAANNNNTTC 1 cut(s) 309
AspLEI GCGC 2 cut(s) 480, 1149
AspS9I GGNCC 2 cut(s) 82, 881
AsuHPI GGTGA 3 cut(s) 206, 671, 1144
AsuII TTCGAA 1 cut(s) 328
AvaI CYCGRG 1 cut(s) 1032
AvaII GGWCC 1 cut(s) 82
BalI TGGCCA 2 cut(s) 370, 1229
BanII GRGCYC 1 cut(s) 798
BauI CACGAG 2 cut(s) 167, 1042
Bbv12I GWGCWC 2 cut(s) 601, 798
BbvCI CCTCAGC 1 cut(s) 243
BbvI GCAGC 4 cut(s) 327, 529, 532, 535
BccI CCATC 3 cut(s) 551, 656, 1235
BceAI ACGGC 1 cut(s) 214
BciT130I CCWGG 1 cut(s) 1205
BclI TGATCA 1 cut(s) 1063
BcoDI GTCTC 2 cut(s) 368, 421
BfaI CTAG 1 cut(s) 594
BfmI CTRYAG 3 cut(s) 48, 341, 531
BisI GCNGC 7 cut(s) 96, 183, 316, 341, 518, 521, 524
BlsI GCNGC 7 cut(s) 97, 184, 317, 342, 519, 522, 525
BmcAI AGTACT 2 cut(s) 274, 940
Bme1390I CCNGG 1 cut(s) 1205
Bme18I GGWCC 1 cut(s) 82
BmeT110I CYCGRG 1 cut(s) 1032
BmgBI CACGTC 1 cut(s) 1210
BmgT120I GGNCC 2 cut(s) 82, 881
BmiI GGNNCC 3 cut(s) 84, 393, 739
BmrFI CCNGG 1 cut(s) 1205
BmrI ACTGGG 1 cut(s) 1080
BmsI GCATC 2 cut(s) 421, 1158
BmuI ACTGGG 1 cut(s) 1080
BoxI GACNNNNGTC 1 cut(s) 60
BpmI CTGGAG 2 cut(s) 392, 963
Bpu10I CCTNAGC 3 cut(s) 177, 243, 610
Bpu14I TTCGAA 1 cut(s) 328
BpuEI CTTGAG 2 cut(s) 1148, 1259
BsaHI GRCGYC 1 cut(s) 93
BsaJI CCNNGG 4 cut(s) 183, 249, 396, 900
BsaWI WCCGGW 2 cut(s) 868, 1323
BsaXI ACNNNNNCTCC 2 cut(s) 906, 936
Bsc4I CCNNNNNNNGG 5 cut(s) 172, 322, 387, 890, 926
Bse1I ACTGG 6 cut(s) 409, 460, 649, 920, 946, 1075
Bse3DI GCAATG 2 cut(s) 48, 577
BseAI TCCGGA 1 cut(s) 868
BseBI CCWGG 1 cut(s) 1205
BseDI CCNNGG 4 cut(s) 183, 249, 396, 900
BseGI GGATG 2 cut(s) 259, 1285
BseLI CCNNNNNNNGG 5 cut(s) 172, 322, 387, 890, 926
BseMI GCAATG 2 cut(s) 48, 577
BseMII CTCAG 5 cut(s) 117, 191, 234, 624, 708
BseNI ACTGG 6 cut(s) 409, 460, 649, 920, 946, 1075
BseRI GAGGAG 4 cut(s) 30, 185, 283, 483
BseXI GCAGC 4 cut(s) 327, 529, 532, 535
BseYI CCCAGC 2 cut(s) 33, 1094
Bsh1236I CGCG 1 cut(s) 185
BshFI GGCC 5 cut(s) 182, 248, 370, 882, 1229
BsiHKAI GWGCWC 2 cut(s) 601, 798
BsiHKCI CYCGRG 1 cut(s) 1032
BsiSI CCGG 3 cut(s) 137, 869, 1324
BslFI GGGAC 1 cut(s) 502
BslI CCNNNNNNNGG 5 cut(s) 172, 322, 387, 890, 926
BsmAI GTCTC 2 cut(s) 368, 421
BsmFI GGGAC 1 cut(s) 502
BsmI GAATGC 1 cut(s) 1136
BsnI GGCC 5 cut(s) 182, 248, 370, 882, 1229
BsoBI CYCGRG 1 cut(s) 1032
Bsp119I TTCGAA 1 cut(s) 328
Bsp1286I GDGCHC 2 cut(s) 601, 798
Bsp13I TCCGGA 1 cut(s) 868
Bsp1407I TGTACA 1 cut(s) 844
Bsp143I GATC 3 cut(s) 778, 809, 1063
BspACI CCGC 4 cut(s) 96, 183, 185, 316
BspANI GGCC 5 cut(s) 182, 248, 370, 882, 1229
BspCNI CTCAG 5 cut(s) 118, 190, 235, 623, 709
BspEI TCCGGA 1 cut(s) 868
BspFNI CGCG 1 cut(s) 185
BspLI GGNNCC 3 cut(s) 84, 393, 739
BspMAI CTGCAG 1 cut(s) 345
BspPI GGATC 2 cut(s) 773, 817
BspT104I TTCGAA 1 cut(s) 328
BsrDI GCAATG 2 cut(s) 48, 577
BsrGI TGTACA 1 cut(s) 844
BsrI ACTGG 6 cut(s) 409, 460, 649, 920, 946, 1075
BssECI CCNNGG 4 cut(s) 183, 249, 396, 900
BssMI GATC 3 cut(s) 778, 809, 1063
BssNI GRCGYC 1 cut(s) 93
BssSI CACGAG 2 cut(s) 167, 1042
BssT1I CCWWGG 2 cut(s) 396, 900
Bst2BI CACGAG 2 cut(s) 167, 1042
Bst2UI CCWGG 1 cut(s) 1205
Bst4CI ACNGT 4 cut(s) 194, 290, 823, 1331
Bst6I CTCTTC 3 cut(s) 204, 231, 968
BstACI GRCGYC 1 cut(s) 93
BstAUI TGTACA 1 cut(s) 844
BstBI TTCGAA 1 cut(s) 328
BstC8I GCNNGC 2 cut(s) 368, 449
BstDEI CTNAG 9 cut(s) 126, 177, 243, 276, 507, 610, 717, 788, 948
BstDSI CCRYGG 1 cut(s) 183
BstF5I GGATG 2 cut(s) 259, 1285
BstFNI CGCG 1 cut(s) 185
BstHHI GCGC 2 cut(s) 480, 1149
BstKTI GATC 3 cut(s) 781, 812, 1066
BstMAI GTCTC 2 cut(s) 368, 421
BstMBI GATC 3 cut(s) 778, 809, 1063
BstMWI GCNNNNNNNGC 6 cut(s) 101, 182, 367, 469, 523, 581
BstNI CCWGG 1 cut(s) 1205
BstPAI GACNNNNGTC 1 cut(s) 60
BstSCI CCNGG 1 cut(s) 1203
BstSFI CTRYAG 3 cut(s) 48, 341, 531
BstUI CGCG 1 cut(s) 185
BstV1I GCAGC 4 cut(s) 327, 529, 532, 535
BstX2I RGATCY 1 cut(s) 809
BstXI CCANNNNNNTGG 1 cut(s) 656
BstYI RGATCY 1 cut(s) 809
BsuRI GGCC 5 cut(s) 182, 248, 370, 882, 1229
BtgI CCRYGG 1 cut(s) 183
BtrI CACGTC 1 cut(s) 1210
BtsCI GGATG 2 cut(s) 259, 1285
BtsI GCAGTG 1 cut(s) 1149
BtsIMutI CAGTG 3 cut(s) 123, 819, 1149
Cac8I GCNNGC 2 cut(s) 368, 449
CfoI GCGC 2 cut(s) 480, 1149
Cfr13I GGNCC 2 cut(s) 82, 881
Cfr42I CCGCGG 1 cut(s) 186
CseI GACGC 1 cut(s) 101
Csp6I GTAC 7 cut(s) 107, 273, 453, 845, 923, 939, 1327
CspCI CAANNNNNGTGG 2 cut(s) 343, 378
CviAII CATG 2 cut(s) 387, 1231
CviQI GTAC 7 cut(s) 107, 273, 453, 845, 923, 939, 1327
DdeI CTNAG 9 cut(s) 126, 177, 243, 276, 507, 610, 717, 788, 948
DpnI GATC 3 cut(s) 780, 811, 1065
DpnII GATC 3 cut(s) 778, 809, 1063
DraI TTTAAA 1 cut(s) 982
EaeI YGGCCR 2 cut(s) 368, 1227
Eam1104I CTCTTC 3 cut(s) 204, 231, 968
EarI CTCTTC 3 cut(s) 204, 231, 968
Ecl136II GAGCTC 1 cut(s) 796
Eco130I CCWWGG 2 cut(s) 396, 900
Eco24I GRGCYC 1 cut(s) 798
Eco32I GATATC 1 cut(s) 1191
Eco47I GGWCC 1 cut(s) 82
Eco53kI GAGCTC 1 cut(s) 796
Eco88I CYCGRG 1 cut(s) 1032
EcoICRI GAGCTC 1 cut(s) 796
EcoRII CCWGG 1 cut(s) 1203
EcoRV GATATC 1 cut(s) 1191
EcoT14I CCWWGG 2 cut(s) 396, 900
EcoT22I ATGCAT 1 cut(s) 436
EcoT38I GRGCYC 1 cut(s) 798
ErhI CCWWGG 2 cut(s) 396, 900
FaeI CATG 2 cut(s) 390, 1234
FaqI GGGAC 1 cut(s) 502
FatI CATG 2 cut(s) 386, 1230
FbaI TGATCA 1 cut(s) 1063
FblI GTMKAC 1 cut(s) 51
Fnu4HI GCNGC 7 cut(s) 96, 183, 316, 341, 518, 521, 524
FokI GGATG 2 cut(s) 266, 1272
FriOI GRGCYC 1 cut(s) 798
Fsp4HI GCNGC 7 cut(s) 96, 183, 316, 341, 518, 521, 524
FspAI RTGCGCAY 1 cut(s) 1148
FspBI CTAG 1 cut(s) 594
FspI TGCGCA 1 cut(s) 1148
GlaI GCGC 2 cut(s) 479, 1148
GluI GCNGC 7 cut(s) 96, 183, 316, 341, 518, 521, 524
GsaI CCCAGC 2 cut(s) 37, 1098
GsuI CTGGAG 2 cut(s) 392, 963
HaeIII GGCC 5 cut(s) 182, 248, 370, 882, 1229
HapII CCGG 3 cut(s) 137, 869, 1324
HgaI GACGC 1 cut(s) 101
HhaI GCGC 2 cut(s) 480, 1149
Hin1I GRCGYC 1 cut(s) 93
Hin1II CATG 2 cut(s) 390, 1234
Hin6I GCGC 2 cut(s) 478, 1147
HinP1I GCGC 2 cut(s) 478, 1147
HincII GTYRAC 1 cut(s) 685
HindII GTYRAC 1 cut(s) 685
HindIII AAGCTT 3 cut(s) 278, 445, 582
HinfI GANTC 3 cut(s) 490, 713, 1159
HpaII CCGG 3 cut(s) 137, 869, 1324
HphI GGTGA 3 cut(s) 206, 671, 1144
Hpy166II GTNNAC 3 cut(s) 52, 115, 685
Hpy188I TCNGA 5 cut(s) 421, 718, 832, 1003, 1240
Hpy188III TCNNGA 3 cut(s) 74, 869, 1085
Hpy8I GTNNAC 3 cut(s) 52, 115, 685
Hpy99I CGWCG 2 cut(s) 59, 95
HpyAV CCTTC 2 cut(s) 221, 948
HpyCH4III ACNGT 4 cut(s) 194, 290, 823, 1331
HpyCH4IV ACGT 1 cut(s) 1209
HpyCH4V TGCA 4 cut(s) 343, 434, 731, 1134
HpyF10VI GCNNNNNNNGC 6 cut(s) 101, 182, 367, 469, 523, 581
HpyF3I CTNAG 9 cut(s) 126, 177, 243, 276, 507, 610, 717, 788, 948
HpySE526I ACGT 1 cut(s) 1209
Hsp92I GRCGYC 1 cut(s) 93
Hsp92II CATG 2 cut(s) 390, 1234
HspAI GCGC 2 cut(s) 478, 1147
Kpn2I TCCGGA 1 cut(s) 868
Ksp22I TGATCA 1 cut(s) 1063
KspI CCGCGG 1 cut(s) 186
Kzo9I GATC 3 cut(s) 778, 809, 1063
LmnI GCTCC 2 cut(s) 871, 944
Lsp1109I GCAGC 4 cut(s) 327, 529, 532, 535
LweI GCATC 2 cut(s) 421, 1158
MaeI CTAG 1 cut(s) 594
MaeII ACGT 1 cut(s) 1209
MaeIII GTNAC 4 cut(s) 121, 194, 550, 1216
MalI GATC 3 cut(s) 780, 811, 1065
MboI GATC 3 cut(s) 778, 809, 1063
MboII GAAGA 8 cut(s) 37, 221, 245, 248, 452, 523, 617, 985
MflI RGATCY 1 cut(s) 809
MhlI GDGCHC 2 cut(s) 601, 798
MlsI TGGCCA 2 cut(s) 370, 1229
MluCI AATT 6 cut(s) 141, 708, 747, 1102, 1268, 1303
MluNI TGGCCA 2 cut(s) 370, 1229
MlyI GAGTC 1 cut(s) 484
Mox20I TGGCCA 2 cut(s) 370, 1229
Mph1103I ATGCAT 1 cut(s) 436
MroI TCCGGA 1 cut(s) 868
MroXI GAANNNNTTC 1 cut(s) 309
MscI TGGCCA 2 cut(s) 370, 1229
MseI TTAA 3 cut(s) 876, 981, 1302
MslI CAYNNNNRTG 1 cut(s) 1250
Msp20I TGGCCA 2 cut(s) 370, 1229
MspA1I CMGCKG 2 cut(s) 185, 340
MspI CCGG 3 cut(s) 137, 869, 1324
MspR9I CCNGG 1 cut(s) 1205
MssI GTTTAAAC 1 cut(s) 982
Mva1269I GAATGC 1 cut(s) 1136
MvaI CCWGG 1 cut(s) 1205
MvnI CGCG 1 cut(s) 185
MwoI GCNNNNNNNGC 6 cut(s) 101, 182, 367, 469, 523, 581
NdeII GATC 3 cut(s) 778, 809, 1063
NlaIII CATG 2 cut(s) 390, 1234
NlaIV GGNNCC 3 cut(s) 84, 393, 739
NmeAIII GCCGAG 1 cut(s) 274
NmuCI GTSAC 3 cut(s) 121, 194, 550
NsbI TGCGCA 1 cut(s) 1148
NsiI ATGCAT 1 cut(s) 436
NspV TTCGAA 1 cut(s) 328
OliI CACNNNNGTG 1 cut(s) 1250
PaeR7I CTCGAG 1 cut(s) 1032
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PctI GAATGC 1 cut(s) 1136
PdmI GAANNNNTTC 1 cut(s) 309
PfeI GAWTC 2 cut(s) 713, 1159
PflMI CCANNNNNTGG 1 cut(s) 387
PfoI TCCNGGA 1 cut(s) 1203
PkrI GCNGC 7 cut(s) 97, 184, 317, 342, 519, 522, 525
PleI GAGTC 1 cut(s) 484
PmeI GTTTAAAC 1 cut(s) 982
PpsI GAGTC 1 cut(s) 484
PshAI GACNNNNGTC 1 cut(s) 60
PshBI ATTAAT 1 cut(s) 1302
Psp124BI GAGCTC 1 cut(s) 798
Psp6I CCWGG 1 cut(s) 1203
PspFI CCCAGC 2 cut(s) 33, 1094
PspGI CCWGG 1 cut(s) 1203
PspN4I GGNNCC 3 cut(s) 84, 393, 739
PspPI GGNCC 2 cut(s) 82, 881
PspXI VCTCGAGB 1 cut(s) 1032
PstI CTGCAG 1 cut(s) 345
PsuI RGATCY 1 cut(s) 809
PvuII CAGCTG 1 cut(s) 340
RsaI GTAC 7 cut(s) 108, 274, 454, 846, 924, 940, 1328
RsaNI GTAC 7 cut(s) 107, 273, 453, 845, 923, 939, 1327
RseI CAYNNNNRTG 1 cut(s) 1250
SacI GAGCTC 1 cut(s) 798
SacII CCGCGG 1 cut(s) 186
SaqAI TTAA 3 cut(s) 876, 981, 1302
SatI GCNGC 7 cut(s) 96, 183, 316, 341, 518, 521, 524
Sau3AI GATC 3 cut(s) 778, 809, 1063
Sau96I GGNCC 2 cut(s) 82, 881
ScaI AGTACT 2 cut(s) 274, 940
SchI GAGTC 1 cut(s) 484
ScrFI CCNGG 1 cut(s) 1205
SduI GDGCHC 2 cut(s) 601, 798
SfaNI GCATC 2 cut(s) 421, 1158
SfcI CTRYAG 3 cut(s) 48, 341, 531
Sfr274I CTCGAG 1 cut(s) 1032
Sfr303I CCGCGG 1 cut(s) 186
SfuI TTCGAA 1 cut(s) 328
SgrBI CCGCGG 1 cut(s) 186
SinI GGWCC 1 cut(s) 82
SlaI CTCGAG 1 cut(s) 1032
SmiMI CAYNNNNRTG 1 cut(s) 1250
SmlI CTYRAG 3 cut(s) 1032, 1163, 1274
SmoI CTYRAG 3 cut(s) 1032, 1163, 1274
Sse9I AATT 6 cut(s) 141, 708, 747, 1102, 1268, 1303
SsiI CCGC 4 cut(s) 96, 183, 185, 316
SspMI CTAG 1 cut(s) 594
SstI GAGCTC 1 cut(s) 798
StyD4I CCNGG 1 cut(s) 1203
StyI CCWWGG 2 cut(s) 396, 900
TaaI ACNGT 4 cut(s) 194, 290, 823, 1331
TaiI ACGT 1 cut(s) 1212
TaqI TCGA 4 cut(s) 303, 328, 1033, 1187
TasI AATT 6 cut(s) 141, 708, 747, 1102, 1268, 1303
TatI WGTACW 4 cut(s) 272, 844, 922, 938
TauI GCSGC 3 cut(s) 98, 185, 318
TfiI GAWTC 2 cut(s) 713, 1159
Tru1I TTAA 3 cut(s) 876, 981, 1302
Tru9I TTAA 3 cut(s) 876, 981, 1302
TscAI CASTG 3 cut(s) 130, 826, 1149
TseFI GTSAC 3 cut(s) 121, 194, 550
TseI GCWGC 4 cut(s) 340, 517, 520, 523
Tsp45I GTSAC 3 cut(s) 121, 194, 550
TspDTI ATGAA 2 cut(s) 312, 1143
TspGWI ACGGA 3 cut(s) 95, 481, 1204
TspRI CASTG 3 cut(s) 130, 826, 1149
Van91I CCANNNNNTGG 1 cut(s) 387
VpaK11BI GGWCC 1 cut(s) 82
VspI ATTAAT 1 cut(s) 1302
XapI RAATTY 2 cut(s) 1102, 1268
XhoI CTCGAG 1 cut(s) 1032
XmiI GTMKAC 1 cut(s) 51
XmnI GAANNNNTTC 1 cut(s) 309
XspI CTAG 1 cut(s) 594
ZrmI AGTACT 2 cut(s) 274, 940
Zsp2I ATGCAT 1 cut(s) 436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.