Prupe.2G110600_v2.0.a1

Ribose-phosphate pyrophosphokinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
16897928 .. 16904789
6862 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G110600.3

Sequence Viewer

Length: 1209 bp
ATGACTTCGCTGCTTCACCCAGCTTCGCCATTCTCTCTCGCTTCTCGCGAATCTCTACGCACTCGCACTTTTCTCCCTAACCGTTCTTGCTCTCGAATCGCAGCCCCAAACGGCGTGAGGTGTAATGTGGGAGATCCTTTGAAATATGCAAATGGTAAGCCATCAACTCCACTATTGAAGACTGAAGAAATGGCGCCCAACTTTTTGGCCACGGAAACGCATTTGGTGAATGCAACTACCAAGAACGATACAAGACTCAGGATATTTTCCGGCACTGCAAACCCTGCGCTTTCTCAGGAAATTGCTTGCAACATGGGTCTGGAACTTGGAAAGATTAAGATAAAACGCTTTGCTGATGGAGAGATATATGTTCAGTTGCAAGAAAGTGTGAGAGGGTGTGATGTATATCTTGTGCAACCCACATGCCCTCCTGCAAATGAAAACCTTATGGAGCTTCTGATAATGATTGATGCCTGTCGGAGGGCGTCAGCCAAGAATATTACCGCTGTGATTCCATATTTTGGATATGCCAGGGCTGATAGAAAGACTCAAGGGCGTGAATCTATTGCAGCCAAACTTGTTGCAAATTTAATTACAGAAGCAGGTGCAAATCGTGTTCTTGCATGTGATCTTCATTCTGGGCAGTCTATGGGATATTTTGATATTCCTGTGGATCATGTATATGGCCAGCCTGTGATCCTTGATTACCTCGCCAGCAAGACTATATGCTCTGATGATTTGGTAGTGGTCTCACCTGATGTTGGGGGTGTTGCTAGAGCTCGTGCGTTTGCAAAAAAATTATCTGATGCTCCTCTAGCCATTGTTGATAAAAGACGCCATGGGCACAATGTGGCAGAGGTGATGAATTTGATAGGTGACGTGAAGGGAAAAGTAGCAGTTATGGTGGATGACATGATTGACACAGCTGGGACTATCACGAAGGGTGCAGCTTTACTACATCAAGAGGGCGCCAGGGAAGTCTATGCATGCAGTACACATGCGGTTTTTAGCCCTCCTGCTATAGAGAGGCTGTCTAGTGGTTTGTTTCAAGAGGTGATCATAACAAATACCATTCCAGTGTCAGAGCAGAATTATTTTCCCCAGCTAACTGTCTTGTCAGTAGCAAATCTTCTGGGCGAGACCATATGGCGTGTTCATGATGACTGCTCTGGTGTCCTTGAACCCTTTTCCACCTTGGGCATTGATTGA

Protein Analysis

403

Amino Acids

43.51

Weight (kDa)

6.52

Isoelectric Point (pI)

42.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 593
Acc36I ACCTGC 1 cut(s) 593
AccB1I GGYRCC 2 cut(s) 193, 968
AccB7I CCANNNNNTGG 1 cut(s) 521
AccII CGCG 1 cut(s) 48
AciI CCGC 2 cut(s) 504, 1001
AclWI GGATC 3 cut(s) 128, 681, 691
AcoI YGGCCR 2 cut(s) 207, 685
AcsI RAATTY 2 cut(s) 586, 865
AcuI CTGAAG 1 cut(s) 204
AcyI GRCGYC 4 cut(s) 194, 485, 835, 969
AdeI CACNNNGTG 1 cut(s) 850
AfaI GTAC 1 cut(s) 994
AfiI CCNNNNNNNGG 3 cut(s) 480, 521, 761
AgsI TTSAA 4 cut(s) 142, 178, 1049, 1181
AjiI CACGTC 1 cut(s) 880
AjnI CCWGG 2 cut(s) 530, 971
AluBI AGCT 6 cut(s) 23, 454, 779, 926, 950, 1105
AluI AGCT 6 cut(s) 23, 454, 779, 926, 950, 1105
Alw21I GWGCWC 1 cut(s) 781
Alw26I GTCTC 2 cut(s) 754, 1133
AlwI GGATC 3 cut(s) 128, 681, 691
AoxI GGCC 2 cut(s) 207, 685
ApeKI GCWGC 4 cut(s) 10, 101, 569, 947
ApoI RAATTY 2 cut(s) 586, 865
AspLEI GCGC 3 cut(s) 196, 289, 971
AsuHPI GGTGA 6 cut(s) 8, 238, 744, 871, 887, 1066
BaeGI GKGCMC 1 cut(s) 846
BalI TGGCCA 2 cut(s) 209, 687
BanI GGYRCC 2 cut(s) 193, 968
BanII GRGCYC 1 cut(s) 781
BarI GAAGNNNNNNTAC 2 cut(s) 1113, 1145
BauI CACGAG 1 cut(s) 780
BbsI GAAGAC 1 cut(s) 185
Bbv12I GWGCWC 1 cut(s) 781
BbvI GCAGC 3 cut(s) 113, 581, 959
BccI CCATC 2 cut(s) 169, 350
BceAI ACGGC 1 cut(s) 127
BciT130I CCWGG 2 cut(s) 532, 973
BclI TGATCA 1 cut(s) 1056
BcoDI GTCTC 2 cut(s) 754, 1133
BfaI CTAG 3 cut(s) 774, 815, 1035
BfmI CTRYAG 1 cut(s) 1020
BfoI RGCGCY 2 cut(s) 197, 972
BfuAI ACCTGC 1 cut(s) 593
BisI GCNGC 4 cut(s) 11, 102, 570, 948
BlsI GCNGC 4 cut(s) 12, 103, 571, 949
Bme1390I CCNGG 2 cut(s) 532, 973
BmgBI CACGTC 1 cut(s) 880
BmiI GGNNCC 2 cut(s) 195, 970
BmrFI CCNGG 2 cut(s) 532, 973
BmsI GCATC 2 cut(s) 460, 796
BpiI GAAGAC 1 cut(s) 185
BpuEI CTTGAG 1 cut(s) 534
BsaBI GATNNNNATC 1 cut(s) 405
BsaHI GRCGYC 4 cut(s) 194, 485, 835, 969
BsaI GGTCTC 2 cut(s) 754, 1133
BsaJI CCNNGG 5 cut(s) 210, 531, 838, 972, 1194
BsaXI ACNNNNNCTCC 2 cut(s) 412, 442
Bsc4I CCNNNNNNNGG 3 cut(s) 480, 521, 761
Bse1I ACTGG 1 cut(s) 1076
Bse8I GATNNNNATC 1 cut(s) 405
BseBI CCWGG 2 cut(s) 532, 973
BseDI CCNNGG 5 cut(s) 210, 531, 838, 972, 1194
BseGI GGATG 1 cut(s) 913
BseJI GATNNNNATC 1 cut(s) 405
BseLI CCNNNNNNNGG 3 cut(s) 480, 521, 761
BseMII CTCAG 2 cut(s) 271, 308
BseNI ACTGG 1 cut(s) 1076
BseRI GAGGAG 1 cut(s) 801
BseSI GKGCMC 1 cut(s) 846
BseXI GCAGC 3 cut(s) 113, 581, 959
BseYI CCCAGC 3 cut(s) 19, 926, 1101
BsgI GTGCAG 1 cut(s) 966
Bsh1236I CGCG 1 cut(s) 48
BshFI GGCC 2 cut(s) 209, 687
BshNI GGYRCC 2 cut(s) 193, 968
BsiHKAI GWGCWC 1 cut(s) 781
BsiSI CCGG 1 cut(s) 270
BslFI GGGAC 1 cut(s) 943
BslI CCNNNNNNNGG 3 cut(s) 480, 521, 761
BsmAI GTCTC 2 cut(s) 754, 1133
BsmFI GGGAC 1 cut(s) 943
BsmI GAATGC 1 cut(s) 235
BsnI GGCC 2 cut(s) 209, 687
Bso31I GGTCTC 2 cut(s) 754, 1133
Bsp1286I GDGCHC 2 cut(s) 781, 846
Bsp143I GATC 5 cut(s) 133, 628, 673, 696, 1056
Bsp19I CCATGG 1 cut(s) 838
Bsp68I TCGCGA 1 cut(s) 48
BspACI CCGC 2 cut(s) 504, 1001
BspANI GGCC 2 cut(s) 209, 687
BspCNI CTCAG 2 cut(s) 270, 307
BspFNI CGCG 1 cut(s) 48
BspHI TCATGA 1 cut(s) 1156
BspLI GGNNCC 2 cut(s) 195, 970
BspMI ACCTGC 1 cut(s) 593
BspPI GGATC 3 cut(s) 128, 681, 691
BspT107I GGYRCC 2 cut(s) 193, 968
BspTNI GGTCTC 2 cut(s) 754, 1133
BsrI ACTGG 1 cut(s) 1076
BssECI CCNNGG 5 cut(s) 210, 531, 838, 972, 1194
BssMI GATC 5 cut(s) 133, 628, 673, 696, 1056
BssNI GRCGYC 4 cut(s) 194, 485, 835, 969
BssSI CACGAG 1 cut(s) 780
BssT1I CCWWGG 2 cut(s) 838, 1194
Bst2BI CACGAG 1 cut(s) 780
Bst2UI CCWGG 2 cut(s) 532, 973
Bst4CI ACNGT 2 cut(s) 83, 1111
BstACI GRCGYC 4 cut(s) 194, 485, 835, 969
BstAPI GCANNNNNTGC 1 cut(s) 284
BstC8I GCNNGC 4 cut(s) 307, 689, 715, 988
BstDEI CTNAG 2 cut(s) 257, 294
BstDSI CCRYGG 2 cut(s) 210, 838
BstENI CCTNNNNNAGG 1 cut(s) 478
BstF5I GGATG 1 cut(s) 913
BstFNI CGCG 1 cut(s) 48
BstH2I RGCGCY 2 cut(s) 197, 972
BstHHI GCGC 3 cut(s) 196, 289, 971
BstKTI GATC 5 cut(s) 136, 631, 676, 699, 1059
BstMAI GTCTC 2 cut(s) 754, 1133
BstMBI GATC 5 cut(s) 133, 628, 673, 696, 1056
BstMWI GCNNNNNNNGC 2 cut(s) 284, 815
BstNI CCWGG 2 cut(s) 532, 973
BstNSI RCATGY 4 cut(s) 426, 627, 990, 1001
BstSCI CCNGG 2 cut(s) 530, 971
BstSFI CTRYAG 1 cut(s) 1020
BstSLI GKGCMC 1 cut(s) 846
BstUI CGCG 1 cut(s) 48
BstV1I GCAGC 3 cut(s) 113, 581, 959
BstV2I GAAGAC 1 cut(s) 185
BstX2I RGATCY 1 cut(s) 133
BstXI CCANNNNNNTGG 1 cut(s) 205
BstYI RGATCY 1 cut(s) 133
BsuRI GGCC 2 cut(s) 209, 687
BtgI CCRYGG 2 cut(s) 210, 838
BtrI CACGTC 1 cut(s) 880
BtsCI GGATG 1 cut(s) 913
BtsI GCAGTG 1 cut(s) 273
BtsIMutI CAGTG 2 cut(s) 273, 1083
BtuMI TCGCGA 1 cut(s) 48
BveI ACCTGC 1 cut(s) 593
Cac8I GCNNGC 4 cut(s) 307, 689, 715, 988
CciI TCATGA 1 cut(s) 1156
CfoI GCGC 3 cut(s) 196, 289, 971
CseI GACGC 2 cut(s) 474, 843
Csp6I GTAC 1 cut(s) 993
CviAII CATG 9 cut(s) 313, 423, 624, 677, 839, 913, 987, 998, 1157
CviQI GTAC 1 cut(s) 993
DdeI CTNAG 2 cut(s) 257, 294
DinI GGCGCC 2 cut(s) 195, 970
DpnI GATC 5 cut(s) 135, 630, 675, 698, 1058
DpnII GATC 5 cut(s) 133, 628, 673, 696, 1056
DraIII CACNNNGTG 1 cut(s) 850
EaeI YGGCCR 2 cut(s) 207, 685
Ecl136II GAGCTC 1 cut(s) 779
Eco130I CCWWGG 2 cut(s) 838, 1194
Eco24I GRGCYC 1 cut(s) 781
Eco31I GGTCTC 2 cut(s) 754, 1133
Eco53kI GAGCTC 1 cut(s) 779
Eco57I CTGAAG 1 cut(s) 204
EcoICRI GAGCTC 1 cut(s) 779
EcoNI CCTNNNNNAGG 1 cut(s) 478
EcoRII CCWGG 2 cut(s) 530, 971
EcoT14I CCWWGG 2 cut(s) 838, 1194
EcoT22I ATGCAT 1 cut(s) 988
EcoT38I GRGCYC 1 cut(s) 781
EgeI GGCGCC 2 cut(s) 195, 970
EheI GGCGCC 2 cut(s) 195, 970
ErhI CCWWGG 2 cut(s) 838, 1194
FaeI CATG 9 cut(s) 316, 426, 627, 680, 842, 916, 990, 1001, 1160
FaqI GGGAC 1 cut(s) 943
FatI CATG 9 cut(s) 312, 422, 623, 676, 838, 912, 986, 997, 1156
FauNDI CATATG 1 cut(s) 1145
FbaI TGATCA 1 cut(s) 1056
Fnu4HI GCNGC 4 cut(s) 11, 102, 570, 948
FokI GGATG 1 cut(s) 920
FriOI GRGCYC 1 cut(s) 781
Fsp4HI GCNGC 4 cut(s) 11, 102, 570, 948
FspBI CTAG 3 cut(s) 774, 815, 1035
GlaI GCGC 3 cut(s) 195, 288, 970
GluI GCNGC 4 cut(s) 11, 102, 570, 948
GsaI CCCAGC 3 cut(s) 23, 930, 1105
HaeII RGCGCY 2 cut(s) 197, 972
HaeIII GGCC 2 cut(s) 209, 687
HapII CCGG 1 cut(s) 270
HgaI GACGC 2 cut(s) 474, 843
HhaI GCGC 3 cut(s) 196, 289, 971
Hin1I GRCGYC 4 cut(s) 194, 485, 835, 969
Hin1II CATG 9 cut(s) 316, 426, 627, 680, 842, 916, 990, 1001, 1160
Hin6I GCGC 3 cut(s) 194, 287, 969
HinP1I GCGC 3 cut(s) 194, 287, 969
HinfI GANTC 6 cut(s) 50, 96, 255, 511, 547, 560
HpaII CCGG 1 cut(s) 270
HphI GGTGA 6 cut(s) 8, 238, 744, 871, 887, 1066
Hpy166II GTNNAC 1 cut(s) 995
Hpy188I TCNGA 5 cut(s) 459, 480, 733, 805, 1084
Hpy188III TCNNGA 9 cut(s) 47, 93, 259, 296, 320, 937, 962, 1049, 1157
Hpy8I GTNNAC 1 cut(s) 995
HpyAV CCTTC 2 cut(s) 877, 934
HpyCH4III ACNGT 2 cut(s) 83, 1111
HpyCH4IV ACGT 1 cut(s) 879
HpyF10VI GCNNNNNNNGC 2 cut(s) 284, 815
HpyF3I CTNAG 2 cut(s) 257, 294
HpySE526I ACGT 1 cut(s) 879
Hsp92I GRCGYC 4 cut(s) 194, 485, 835, 969
Hsp92II CATG 9 cut(s) 316, 426, 627, 680, 842, 916, 990, 1001, 1160
HspAI GCGC 3 cut(s) 194, 287, 969
KasI GGCGCC 2 cut(s) 193, 968
Ksp22I TGATCA 1 cut(s) 1056
Kzo9I GATC 5 cut(s) 133, 628, 673, 696, 1056
LmnI GCTCC 2 cut(s) 451, 814
Lsp1109I GCAGC 3 cut(s) 113, 581, 959
LweI GCATC 2 cut(s) 460, 796
MaeI CTAG 3 cut(s) 774, 815, 1035
MaeII ACGT 1 cut(s) 879
MaeIII GTNAC 1 cut(s) 875
MalI GATC 5 cut(s) 135, 630, 675, 698, 1058
MboI GATC 5 cut(s) 133, 628, 673, 696, 1056
MboII GAAGA 4 cut(s) 190, 197, 623, 1121
MflI RGATCY 1 cut(s) 133
MhlI GDGCHC 2 cut(s) 781, 846
MlsI TGGCCA 2 cut(s) 209, 687
MluCI AATT 6 cut(s) 300, 586, 591, 797, 865, 1090
MluNI TGGCCA 2 cut(s) 209, 687
Mly113I GGCGCC 2 cut(s) 194, 969
MlyI GAGTC 2 cut(s) 249, 541
MmeI TCCRAC 1 cut(s) 458
Mox20I TGGCCA 2 cut(s) 209, 687
Mph1103I ATGCAT 1 cut(s) 988
MscI TGGCCA 2 cut(s) 209, 687
MseI TTAA 2 cut(s) 336, 590
MslI CAYNNNNRTG 2 cut(s) 681, 1076
Msp20I TGGCCA 2 cut(s) 209, 687
MspA1I CMGCKG 2 cut(s) 506, 926
MspI CCGG 1 cut(s) 270
MspR9I CCNGG 2 cut(s) 532, 973
Mva1269I GAATGC 1 cut(s) 235
MvaI CCWGG 2 cut(s) 532, 973
MvnI CGCG 1 cut(s) 48
MwoI GCNNNNNNNGC 2 cut(s) 284, 815
NarI GGCGCC 2 cut(s) 194, 969
NcoI CCATGG 1 cut(s) 838
NdeI CATATG 1 cut(s) 1145
NdeII GATC 5 cut(s) 133, 628, 673, 696, 1056
NlaIII CATG 9 cut(s) 316, 426, 627, 680, 842, 916, 990, 1001, 1160
NlaIV GGNNCC 2 cut(s) 195, 970
NmuCI GTSAC 1 cut(s) 875
NruI TCGCGA 1 cut(s) 48
NsiI ATGCAT 1 cut(s) 988
NspI RCATGY 4 cut(s) 426, 627, 990, 1001
PaeI GCATGC 1 cut(s) 990
PagI TCATGA 1 cut(s) 1156
PaqCI CACCTGC 1 cut(s) 593
PcsI WCGNNNNNNNCGW 1 cut(s) 45
PctI GAATGC 1 cut(s) 235
PfeI GAWTC 4 cut(s) 50, 96, 511, 560
PflMI CCANNNNNTGG 1 cut(s) 521
PkrI GCNGC 4 cut(s) 12, 103, 571, 949
PleI GAGTC 2 cut(s) 249, 541
PluTI GGCGCC 2 cut(s) 197, 972
PpsI GAGTC 2 cut(s) 249, 541
Psp124BI GAGCTC 1 cut(s) 781
Psp6I CCWGG 2 cut(s) 530, 971
PspFI CCCAGC 3 cut(s) 19, 926, 1101
PspGI CCWGG 2 cut(s) 530, 971
PspN4I GGNNCC 2 cut(s) 195, 970
PsuI RGATCY 1 cut(s) 133
PvuII CAGCTG 1 cut(s) 926
RruI TCGCGA 1 cut(s) 48
RsaI GTAC 1 cut(s) 994
RsaNI GTAC 1 cut(s) 993
RseI CAYNNNNRTG 2 cut(s) 681, 1076
SacI GAGCTC 1 cut(s) 781
SaqAI TTAA 2 cut(s) 336, 590
SatI GCNGC 4 cut(s) 11, 102, 570, 948
Sau3AI GATC 5 cut(s) 133, 628, 673, 696, 1056
SchI GAGTC 2 cut(s) 249, 541
ScrFI CCNGG 2 cut(s) 532, 973
SduI GDGCHC 2 cut(s) 781, 846
SfaNI GCATC 2 cut(s) 460, 796
SfcI CTRYAG 1 cut(s) 1020
SfoI GGCGCC 2 cut(s) 195, 970
SmiMI CAYNNNNRTG 2 cut(s) 681, 1076
SmlI CTYRAG 1 cut(s) 549
SmoI CTYRAG 1 cut(s) 549
SphI GCATGC 1 cut(s) 990
Sse9I AATT 6 cut(s) 300, 586, 591, 797, 865, 1090
SsiI CCGC 2 cut(s) 504, 1001
SspDI GGCGCC 2 cut(s) 193, 968
SspI AATATT 1 cut(s) 499
SspMI CTAG 3 cut(s) 774, 815, 1035
SstI GAGCTC 1 cut(s) 781
StyD4I CCNGG 2 cut(s) 530, 971
StyI CCWWGG 2 cut(s) 838, 1194
TaaI ACNGT 2 cut(s) 83, 1111
TaiI ACGT 1 cut(s) 882
TaqI TCGA 1 cut(s) 94
TasI AATT 6 cut(s) 300, 586, 591, 797, 865, 1090
TatI WGTACW 1 cut(s) 992
TfiI GAWTC 4 cut(s) 50, 96, 511, 560
Tru1I TTAA 2 cut(s) 336, 590
Tru9I TTAA 2 cut(s) 336, 590
TscAI CASTG 2 cut(s) 280, 1083
TseFI GTSAC 1 cut(s) 875
TseI GCWGC 4 cut(s) 10, 101, 569, 947
Tsp45I GTSAC 1 cut(s) 875
TspDTI ATGAA 4 cut(s) 453, 623, 878, 1145
TspGWI ACGGA 1 cut(s) 227
TspRI CASTG 2 cut(s) 280, 1083
Van91I CCANNNNNTGG 1 cut(s) 521
XagI CCTNNNNNAGG 1 cut(s) 478
XapI RAATTY 2 cut(s) 586, 865
XceI RCATGY 4 cut(s) 426, 627, 990, 1001
XspI CTAG 3 cut(s) 774, 815, 1035
Zsp2I ATGCAT 1 cut(s) 988
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.