Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0004401

Physical Location & Seq

Genomic Coordinates Forward (+)

19809195 .. 19814072

Gene Structure 4878 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G142300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1044 bp

ATGTTTTCTTCTTCTCTAGTTTCAGCAATGTCAATAATTGGGCGCAGAGGAATTCATTTCTTGCATAAACTCAATGCTGAAAATGTTCCCGGTGCTTTGATAGAGAACGGTCAAAGCCGACTTATAGATGCTTCTCTCACTCTCATTCGTGAGAGCGCAAAGCTCAGGGGAGAGCTTGTGCGTGCTTTAGGAGGCGCTGTAGCATCCACTTCTCTTTTGGGTGTTCCTCTTGGACATAACTCGTCGTTTCTTCAAGGGCCTGCTTTTGCTCCTCCTCGGATTAGAGAGGCAATCTGGTGTGGTAGTACCAACTCAACAACTGAAGAAGGGAAAGAACTAAGAGACCCAAGGGTGCTAACTGATGTTGGTGATATTCCTGTCCAAGAAATTCGAGATTGTGGAGTCGAAGATGACAGACTGATGAATGTCGTAAGTGAGTCTGTCAAGCTAGTGATGGAACAGGATCCACTGCGCCCATTAGTGTTAGGTGGTGACCACTCAATTTCTTATCCTGTTGTAAGAGCTGTCTCTGAGAAGCTTGGGGGACCTGTGGATATTCTTCATCTGGATGCCCATCCTGATATCTATGACGCCTTTGAAGGTAATGTATATTCACATGCGTCTTCTTTTGCTCGAATTATGGAAGGTGGTTATGCTCGTCGTCTTTTGCAGGTTGGTATTAGATCAATCAACATAGAAGGGCGTGAACAAGGAAAACGATTTGGTGTTGAGCAATATGAAATGCGAACCTTTTCAAGAGACCGTCATTTTTTGGAAAACCTGAAATTGGGGGAAGGTGTGAAGGGCGTGTACATCTCGATAGATGTAGATTGCCTTGATCCTGCATTTGCTCCTGGAGTGTCACACATTGAGCCAGGGGGTCTCTCCTTCCGTGATGTTCTCAACATACTCCACAACCTTCAAGGCGACATTGTTGCTGCAGATGTCGTTGAATTCAATCCCCAGCGTGACACTGTTGATGGGATGACTGCAATGGTAGCTGCTAAGCTGGTGAGAGAGTTGGCTGCAAAGATATCAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004053 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006520 GO:0006525 GO:0006527 GO:0006560 GO:0006570 GO:0006576 GO:0006591 GO:0006595 GO:0006596 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008783 GO:0009056 GO:0009058 GO:0009063 GO:0009064 GO:0009065 GO:0009072 GO:0009308 GO:0009309 GO:0009445 GO:0009446 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009987 GO:0016054 GO:0016787 GO:0016810 GO:0016813 GO:0019752 GO:0033388 GO:0033389 GO:0034641 GO:0042401 GO:0042742 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044271 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046395 GO:0046483 GO:0046872 GO:0046914 GO:0050832 GO:0050896 GO:0050897 GO:0051704 GO:0051707 GO:0071704 GO:0097164 GO:0098542 GO:1901360 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901605 GO:1901606

KEGG Pathways

Metabolic & Signaling

ko00220 ko00330 ko01100 ko01110 ko01130 ko01230 ko05146 map00220 map00330 map01100 map01110 map01130 map01230 map05146

Pfam Domains

Protein Families

Arginase

Protein Analysis

348

Amino Acids

37.78

Weight (kDa)

5.62

Isoelectric Point (pI)

44.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08870 AT4G08870 AT4G08900
fragaria_vesca	FvH4_7g11450 FvH4_7g11450 FvH4_7g11450 FvH4_7g11450 FvH4_7g11450
malus_domestica	MD02G1206500.v1.1 MD02G1206600.v1.1 MD07G1119200.v1.1
prunus_persica	Prupe.2G142300_v2.0.a1 Prupe.2G142300_v2.0.a1
pyrus_communis	pycom07g10550
rosa_chinensis	RchiOBHm_Chr1g0349751 RchiOBHm_Chr1g0349761 RchiOBHm_Chr1g0349771
rosa_laevigata	RLG00000028523 RLG00000028524
rosa_multiflora	Rmu_sc0004624.1_g000004 Rmu_sc0004624.1_g000006 Rmu_sc0014735.1_g000001
rosa_roxburghii	Rroxscaffold_4G00305350
rosa_rugosa	Rorug01G0205900
rosa_samantha	Rh1AG223000 Rh1AG223100 Rh1BG189200 Rh1CG207800 Rh1CG207900 Rh1DG218100
rosa_wichuraiana	Rw1G019010 Rw1G019020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	661
AclWI	GGATC	3 cut(s)	458, 471, 833
AcsI	RAATTY	3 cut(s)	51, 387, 953
AcuI	CTGAAG	1 cut(s)	342
AcyI	GRCGYC	1 cut(s)	591
AfaI	GTAC	2 cut(s)	307, 812
AfiI	CCNNNNNNNGG	1 cut(s)	787
AgsI	TTSAA	6 cut(s)	254, 599, 756, 923, 953, 958
AjnI	CCWGG	2 cut(s)	853, 874
AluBI	AGCT	7 cut(s)	163, 175, 448, 524, 538, 1001, 1009
AluI	AGCT	7 cut(s)	163, 175, 448, 524, 538, 1001, 1009
Alw26I	GTCTC	4 cut(s)	336, 532, 753, 887
AlwI	GGATC	3 cut(s)	458, 471, 833
AoxI	GGCC	1 cut(s)	257
ApeKI	GCWGC	3 cut(s)	938, 1001, 1025
ApoI	RAATTY	3 cut(s)	51, 387, 953
Asp700I	GAANNNNTTC	2 cut(s)	84, 751
AspLEI	GCGC	4 cut(s)	45, 158, 197, 474
AspS9I	GGNCC	2 cut(s)	257, 545
AsuC2I	CCSGG	1 cut(s)	90
AsuHPI	GGTGA	3 cut(s)	380, 503, 1024
AvaII	GGWCC	1 cut(s)	545
BamHI	GGATCC	1 cut(s)	463
BarI	GAAGNNNNNNTAC	2 cut(s)	794, 826
BbsI	GAAGAC	1 cut(s)	615
BbvI	GCAGC	3 cut(s)	925, 988, 1012
BccI	CCATC	3 cut(s)	448, 582, 974
BcgI	CGANNNNNNTGC	2 cut(s)	917, 951
BciT130I	CCWGG	2 cut(s)	855, 876
BcnI	CCSGG	1 cut(s)	90
BcoDI	GTCTC	4 cut(s)	336, 532, 753, 887
BfaI	CTAG	2 cut(s)	17, 449
BfmI	CTRYAG	2 cut(s)	198, 939
BfoI	RGCGCY	1 cut(s)	198
BfuAI	ACCTGC	1 cut(s)	661
BisI	GCNGC	3 cut(s)	939, 1002, 1026
BlpI	GCTNAGC	1 cut(s)	1005
BlsI	GCNGC	3 cut(s)	940, 1003, 1027
Bme1390I	CCNGG	3 cut(s)	90, 855, 876
Bme18I	GGWCC	1 cut(s)	545
BmgT120I	GGNCC	2 cut(s)	257, 545
BmiI	GGNNCC	2 cut(s)	465, 546
BmrFI	CCNGG	3 cut(s)	90, 855, 876
BmsI	GCATC	3 cut(s)	118, 212, 559
BpiI	GAAGAC	1 cut(s)	615
BpmI	CTGGAG	1 cut(s)	876
Bpu10I	CCTNAGC	1 cut(s)	164
Bpu1102I	GCTNAGC	1 cut(s)	1005
BpuMI	CCSGG	1 cut(s)	90
BsaBI	GATNNNNATC	1 cut(s)	573
BsaHI	GRCGYC	1 cut(s)	591
BsaI	GGTCTC	3 cut(s)	336, 753, 887
BsaJI	CCNNGG	3 cut(s)	275, 347, 875
BsaXI	ACNNNNNCTCC	4 cut(s)	162, 183, 192, 213
Bsc4I	CCNNNNNNNGG	1 cut(s)	787
Bse3DI	GCAATG	2 cut(s)	33, 999
Bse8I	GATNNNNATC	1 cut(s)	573
BseBI	CCWGG	2 cut(s)	855, 876
BseDI	CCNNGG	3 cut(s)	275, 347, 875
BseGI	GGATG	4 cut(s)	203, 574, 574, 990
BseJI	GATNNNNATC	1 cut(s)	573
BseLI	CCNNNNNNNGG	1 cut(s)	787
BseMI	GCAATG	2 cut(s)	33, 999
BseMII	CTCAG	2 cut(s)	178, 522
BseRI	GAGGAG	2 cut(s)	261, 264
BseXI	GCAGC	3 cut(s)	925, 988, 1012
BseYI	CCCAGC	1 cut(s)	963
BshFI	GGCC	1 cut(s)	259
BsiSI	CCGG	1 cut(s)	90
BslFI	GGGAC	1 cut(s)	558
BslI	CCNNNNNNNGG	1 cut(s)	787
BsmAI	GTCTC	4 cut(s)	336, 532, 753, 887
BsmFI	GGGAC	1 cut(s)	558
BsnI	GGCC	1 cut(s)	259
Bso31I	GGTCTC	3 cut(s)	336, 753, 887
Bsp1407I	TGTACA	1 cut(s)	810
Bsp143I	GATC	3 cut(s)	463, 683, 838
Bsp1720I	GCTNAGC	1 cut(s)	1005
BspANI	GGCC	1 cut(s)	259
BspCNI	CTCAG	2 cut(s)	177, 523
BspLI	GGNNCC	2 cut(s)	465, 546
BspMAI	CTGCAG	1 cut(s)	943
BspMI	ACCTGC	1 cut(s)	661
BspPI	GGATC	3 cut(s)	458, 471, 833
BspTNI	GGTCTC	3 cut(s)	336, 753, 887
BsrDI	GCAATG	2 cut(s)	33, 999
BsrGI	TGTACA	1 cut(s)	810
BssECI	CCNNGG	3 cut(s)	275, 347, 875
BssMI	GATC	3 cut(s)	463, 683, 838
BssNI	GRCGYC	1 cut(s)	591
BssT1I	CCWWGG	1 cut(s)	347
Bst2UI	CCWGG	2 cut(s)	855, 876
Bst4CI	ACNGT	3 cut(s)	110, 764, 976
BstACI	GRCGYC	1 cut(s)	591
BstAUI	TGTACA	1 cut(s)	810
BstC8I	GCNNGC	2 cut(s)	183, 261
BstDEI	CTNAG	4 cut(s)	164, 338, 531, 1005
BstEII	GGTNACC	1 cut(s)	491
BstF5I	GGATG	4 cut(s)	203, 574, 574, 990
BstH2I	RGCGCY	1 cut(s)	198
BstHHI	GCGC	4 cut(s)	45, 158, 197, 474
BstKTI	GATC	3 cut(s)	466, 686, 841
BstMAI	GTCTC	4 cut(s)	336, 532, 753, 887
BstMBI	GATC	3 cut(s)	463, 683, 838
BstMWI	GCNNNNNNNGC	1 cut(s)	998
BstNI	CCWGG	2 cut(s)	855, 876
BstNSI	RCATGY	1 cut(s)	620
BstPI	GGTNACC	1 cut(s)	491
BstSCI	CCNGG	3 cut(s)	88, 853, 874
BstSFI	CTRYAG	2 cut(s)	198, 939
BstV1I	GCAGC	3 cut(s)	925, 988, 1012
BstV2I	GAAGAC	1 cut(s)	615
BstX2I	RGATCY	1 cut(s)	463
BstYI	RGATCY	1 cut(s)	463
BsuRI	GGCC	1 cut(s)	259
BtsCI	GGATG	4 cut(s)	203, 574, 574, 990
BtsI	GCAGTG	1 cut(s)	467
BtsIMutI	CAGTG	2 cut(s)	467, 972
BveI	ACCTGC	1 cut(s)	661
Cac8I	GCNNGC	2 cut(s)	183, 261
CfoI	GCGC	4 cut(s)	45, 158, 197, 474
Cfr13I	GGNCC	2 cut(s)	257, 545
CseI	GACGC	2 cut(s)	599, 609
Csp6I	GTAC	2 cut(s)	306, 811
CviAII	CATG	1 cut(s)	617
CviQI	GTAC	2 cut(s)	306, 811
DdeI	CTNAG	4 cut(s)	164, 338, 531, 1005
DpnI	GATC	3 cut(s)	465, 685, 840
DpnII	GATC	3 cut(s)	463, 683, 838
Eco130I	CCWWGG	1 cut(s)	347
Eco31I	GGTCTC	3 cut(s)	336, 753, 887
Eco32I	GATATC	2 cut(s)	583, 1035
Eco47I	GGWCC	1 cut(s)	545
Eco57I	CTGAAG	1 cut(s)	342
Eco91I	GGTNACC	1 cut(s)	491
EcoO109I	RGGNCCY	2 cut(s)	257, 545
EcoO65I	GGTNACC	1 cut(s)	491
EcoRI	GAATTC	2 cut(s)	51, 953
EcoRII	CCWGG	2 cut(s)	853, 874
EcoRV	GATATC	2 cut(s)	583, 1035
EcoT14I	CCWWGG	1 cut(s)	347
ErhI	CCWWGG	1 cut(s)	347
FaeI	CATG	1 cut(s)	620
FaqI	GGGAC	1 cut(s)	558
FatI	CATG	1 cut(s)	616
Fnu4HI	GCNGC	3 cut(s)	939, 1002, 1026
FokI	GGATG	4 cut(s)	190, 561, 581, 997
Fsp4HI	GCNGC	3 cut(s)	939, 1002, 1026
FspBI	CTAG	2 cut(s)	17, 449
GlaI	GCGC	4 cut(s)	44, 157, 196, 473
GluI	GCNGC	3 cut(s)	939, 1002, 1026
GsaI	CCCAGC	1 cut(s)	967
GsuI	CTGGAG	1 cut(s)	876
HaeII	RGCGCY	1 cut(s)	198
HaeIII	GGCC	1 cut(s)	259
HapII	CCGG	1 cut(s)	90
HgaI	GACGC	2 cut(s)	599, 609
HhaI	GCGC	4 cut(s)	45, 158, 197, 474
Hin1I	GRCGYC	1 cut(s)	591
Hin1II	CATG	1 cut(s)	620
Hin6I	GCGC	4 cut(s)	43, 156, 195, 472
HinP1I	GCGC	4 cut(s)	43, 156, 195, 472
HindIII	AAGCTT	1 cut(s)	536
HinfI	GANTC	2 cut(s)	402, 437
HpaII	CCGG	1 cut(s)	90
HphI	GGTGA	3 cut(s)	380, 503, 1024
Hpy166II	GTNNAC	2 cut(s)	707, 811
Hpy188I	TCNGA	2 cut(s)	279, 532
Hpy188III	TCNNGA	6 cut(s)	149, 392, 566, 578, 756, 817
Hpy8I	GTNNAC	2 cut(s)	707, 811
Hpy99I	CGWCG	2 cut(s)	247, 663
HpyAV	CCTTC	8 cut(s)	320, 593, 638, 692, 788, 796, 898, 929
HpyCH4III	ACNGT	3 cut(s)	110, 764, 976
HpyCH4V	TGCA	6 cut(s)	64, 670, 845, 941, 992, 1028
HpyF10VI	GCNNNNNNNGC	1 cut(s)	998
HpyF3I	CTNAG	4 cut(s)	164, 338, 531, 1005
Hsp92I	GRCGYC	1 cut(s)	591
Hsp92II	CATG	1 cut(s)	620
HspAI	GCGC	4 cut(s)	43, 156, 195, 472
Kzo9I	GATC	3 cut(s)	463, 683, 838
LmnI	GCTCC	2 cut(s)	274, 856
Lsp1109I	GCAGC	3 cut(s)	925, 988, 1012
LweI	GCATC	3 cut(s)	118, 212, 559
MaeI	CTAG	2 cut(s)	17, 449
MaeIII	GTNAC	3 cut(s)	491, 861, 968
MalI	GATC	3 cut(s)	465, 685, 840
MboI	GATC	3 cut(s)	463, 683, 838
MboII	GAAGA	6 cut(s)	3, 242, 335, 419, 551, 615
MflI	RGATCY	1 cut(s)	463
MluCI	AATT	7 cut(s)	36, 51, 387, 501, 636, 785, 953
MlyI	GAGTC	2 cut(s)	411, 446
MnlI	CCTC	6 cut(s)	41, 185, 237, 280, 282, 285
MroXI	GAANNNNTTC	2 cut(s)	84, 751
MslI	CAYNNNNRTG	1 cut(s)	567
MspI	CCGG	1 cut(s)	90
MspR9I	CCNGG	3 cut(s)	90, 855, 876
MvaI	CCWGG	2 cut(s)	855, 876
MwoI	GCNNNNNNNGC	1 cut(s)	998
NciI	CCSGG	1 cut(s)	90
NdeII	GATC	3 cut(s)	463, 683, 838
NlaIII	CATG	1 cut(s)	620
NlaIV	GGNNCC	2 cut(s)	465, 546
NmuCI	GTSAC	3 cut(s)	491, 861, 968
NspI	RCATGY	1 cut(s)	620
PdmI	GAANNNNTTC	2 cut(s)	84, 751
PfoI	TCCNGGA	1 cut(s)	853
PkrI	GCNGC	3 cut(s)	940, 1003, 1027
PleI	GAGTC	2 cut(s)	410, 445
PpsI	GAGTC	2 cut(s)	410, 445
PpuMI	RGGWCCY	1 cut(s)	545
Psp5II	RGGWCCY	1 cut(s)	545
Psp6I	CCWGG	2 cut(s)	853, 874
PspEI	GGTNACC	1 cut(s)	491
PspFI	CCCAGC	1 cut(s)	963
PspGI	CCWGG	2 cut(s)	853, 874
PspN4I	GGNNCC	2 cut(s)	465, 546
PspPI	GGNCC	2 cut(s)	257, 545
PspPPI	RGGWCCY	1 cut(s)	545
PstI	CTGCAG	1 cut(s)	943
PsuI	RGATCY	1 cut(s)	463
RsaI	GTAC	2 cut(s)	307, 812
RsaNI	GTAC	2 cut(s)	306, 811
RseI	CAYNNNNRTG	1 cut(s)	567
SatI	GCNGC	3 cut(s)	939, 1002, 1026
Sau3AI	GATC	3 cut(s)	463, 683, 838
Sau96I	GGNCC	2 cut(s)	257, 545
SchI	GAGTC	2 cut(s)	411, 446
ScrFI	CCNGG	3 cut(s)	90, 855, 876
SfaNI	GCATC	3 cut(s)	118, 212, 559
SfcI	CTRYAG	2 cut(s)	198, 939
SinI	GGWCC	1 cut(s)	545
SmiMI	CAYNNNNRTG	1 cut(s)	567
Sse9I	AATT	7 cut(s)	36, 51, 387, 501, 636, 785, 953
SspMI	CTAG	2 cut(s)	17, 449
StyD4I	CCNGG	3 cut(s)	88, 853, 874
StyI	CCWWGG	1 cut(s)	347
TaaI	ACNGT	3 cut(s)	110, 764, 976
TaqI	TCGA	4 cut(s)	391, 405, 634, 818
TasI	AATT	7 cut(s)	36, 51, 387, 501, 636, 785, 953
TatI	WGTACW	1 cut(s)	810
TscAI	CASTG	2 cut(s)	474, 979
TseFI	GTSAC	3 cut(s)	491, 861, 968
TseI	GCWGC	3 cut(s)	938, 1001, 1025
Tsp45I	GTSAC	3 cut(s)	491, 861, 968
TspDTI	ATGAA	4 cut(s)	44, 437, 551, 753
TspGWI	ACGGA	1 cut(s)	881
TspRI	CASTG	2 cut(s)	474, 979
VpaK11BI	GGWCC	1 cut(s)	545
XapI	RAATTY	3 cut(s)	51, 387, 953
XceI	RCATGY	1 cut(s)	620
XcmI	CCANNNNNNNNNTGG	1 cut(s)	214
XmnI	GAANNNNTTC	2 cut(s)	84, 751
XspI	CTAG	2 cut(s)	17, 449

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.