Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0010086

Physical Location & Seq

Genomic Coordinates Reverse (-)

20233198 .. 20235890

Gene Structure 2693 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G145800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 672 bp

ATGACCAAGCAGCATGCTAACTGGTCCCCCTACGACAACAATGGCGGATCCTGTGTCGCTATTGCGGGAGCCAATTACTGTGTGATTGCGGCCGATACTCGGATGTCGACTGGTTACAGTATTCTCACCCGCGACTATTCTAAGATCTGCAAATTAGCAGACAAAGCTGTATTAGCCTCGTCTGGTTTTCAAGCTGATGTGAAAGCGTTGCAAAAGCATTTGGCTGCTAAGCACTTGATCTATCAGCATCAACATAACAAACAAATGAGCTGCCCTGCAATGGCTCAACTACTTTCCAACACCCTTTACTACAAACGCTTCTTTCCCTACTATGCTTTCAATGTTTTGGGTGGTTTAGATAGTGAAGGTAAGGGCTGTGTCTTCACATATGATGCTGTTGGTTCCTACGAGAGGGTTGGATATAGCTCCCAAGGTTCCGGGTCTACACTCATCATACCCTTTTTAGATAATCAGTTGAAGTCACCTAGCCCTCTCTTATTGCCTGCCGTGGATGCCGTTACACCACTTTCTGAAGCAGAGGCAATAGATTTGGTTAAAACTGTTTTTGCATCAGCAACAGAGAGAGATATATACACTGGTGACAGGCTTGAAATTGTCGTTCTAAATGCTGATGGCACTCGGTATGAGTACATGGAACTGAGGAAAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0002376 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005839 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0016020 GO:0019774 GO:0032991 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

ko03050 map03050

Pfam Domains

Protein Families

Proteasome

Protein Analysis

224

Amino Acids

24.49

Weight (kDa)

6.51

Isoelectric Point (pI)

38.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010086)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G60820 AT3G60820 AT3G60820
fragaria_vesca	FvH4_7g11920 FvH4_7g11920
malus_domestica	MD02G1204000.v1.1 MD07G1122000.v1.1
prunus_persica	Prupe.2G145800_v2.0.a1
pyrus_communis	pycom02g16630 pycom07g11030
rosa_chinensis	RchiOBHm_Chr1g0350601
rosa_laevigata	RLG00000028469
rosa_multiflora	Rmu_sc0014368.1_g000004 Rmu_sc0030263.1_g000001
rosa_roxburghii	Rroxscaffold_4G00304680
rosa_rugosa	Rorug01G0212500
rosa_samantha	Rh1AG227000 Rh1BG195700 Rh1CG211800 Rh1DG223800
rosa_wichuraiana	Rw1G019620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	107, 443
AccII	CGCG	1 cut(s)	132
AciI	CCGC	4 cut(s)	45, 65, 89, 130
AclWI	GGATC	2 cut(s)	42, 55
AcoI	YGGCCR	1 cut(s)	90
AcuI	CTGAAG	1 cut(s)	552
AfaI	GTAC	1 cut(s)	650
AfiI	CCNNNNNNNGG	3 cut(s)	99, 280, 411
AgsI	TTSAA	4 cut(s)	191, 340, 478, 611
AluBI	AGCT	4 cut(s)	167, 194, 270, 426
AluI	AGCT	4 cut(s)	167, 194, 270, 426
AlwI	GGATC	2 cut(s)	42, 55
AoxI	GGCC	1 cut(s)	90
ApeKI	GCWGC	3 cut(s)	10, 224, 270
AspS9I	GGNCC	1 cut(s)	24
AsuC2I	CCSGG	1 cut(s)	439
AsuHPI	GGTGA	3 cut(s)	118, 474, 611
AvaII	GGWCC	1 cut(s)	24
BamHI	GGATCC	1 cut(s)	47
BbsI	GAAGAC	1 cut(s)	373
BbvI	GCAGC	3 cut(s)	22, 211, 257
BccI	CCATC	1 cut(s)	626
BceAI	ACGGC	2 cut(s)	491, 500
BcnI	CCSGG	1 cut(s)	439
BfaI	CTAG	1 cut(s)	486
BglII	AGATCT	1 cut(s)	144
BisI	GCNGC	4 cut(s)	11, 90, 225, 271
BlpI	GCTNAGC	1 cut(s)	228
BlsI	GCNGC	4 cut(s)	12, 91, 226, 272
Bme1390I	CCNGG	1 cut(s)	439
Bme18I	GGWCC	1 cut(s)	24
BmgT120I	GGNCC	1 cut(s)	24
BmiI	GGNNCC	5 cut(s)	26, 49, 70, 403, 436
BmrFI	CCNGG	1 cut(s)	439
BmsI	GCATC	4 cut(s)	256, 382, 502, 578
BpiI	GAAGAC	1 cut(s)	373
Bpu1102I	GCTNAGC	1 cut(s)	228
BpuMI	CCSGG	1 cut(s)	439
BsaJI	CCNNGG	2 cut(s)	430, 507
Bsc4I	CCNNNNNNNGG	3 cut(s)	99, 280, 411
Bse1I	ACTGG	3 cut(s)	26, 115, 601
Bse3DI	GCAATG	1 cut(s)	285
BseDI	CCNNGG	2 cut(s)	430, 507
BseGI	GGATG	2 cut(s)	108, 517
BseLI	CCNNNNNNNGG	3 cut(s)	99, 280, 411
BseMI	GCAATG	1 cut(s)	285
BseMII	CTCAG	1 cut(s)	650
BseNI	ACTGG	3 cut(s)	26, 115, 601
BseX3I	CGGCCG	1 cut(s)	90
BseXI	GCAGC	3 cut(s)	22, 211, 257
Bsh1236I	CGCG	1 cut(s)	132
Bsh1285I	CGRYCG	1 cut(s)	93
BshFI	GGCC	1 cut(s)	92
BsiEI	CGRYCG	1 cut(s)	93
BsiSI	CCGG	1 cut(s)	438
BslFI	GGGAC	1 cut(s)	10
BslI	CCNNNNNNNGG	3 cut(s)	99, 280, 411
BsmFI	GGGAC	1 cut(s)	10
BsnI	GGCC	1 cut(s)	92
Bsp143I	GATC	3 cut(s)	47, 144, 237
Bsp1720I	GCTNAGC	1 cut(s)	228
BspACI	CCGC	4 cut(s)	45, 65, 89, 130
BspANI	GGCC	1 cut(s)	92
BspCNI	CTCAG	1 cut(s)	651
BspFNI	CGCG	1 cut(s)	132
BspLI	GGNNCC	5 cut(s)	26, 49, 70, 403, 436
BspPI	GGATC	2 cut(s)	42, 55
BsrDI	GCAATG	1 cut(s)	285
BsrI	ACTGG	3 cut(s)	26, 115, 601
BssECI	CCNNGG	2 cut(s)	430, 507
BssMI	GATC	3 cut(s)	47, 144, 237
BssT1I	CCWWGG	1 cut(s)	430
Bst4CI	ACNGT	3 cut(s)	80, 119, 562
BstC8I	GCNNGC	2 cut(s)	15, 504
BstDEI	CTNAG	3 cut(s)	141, 228, 659
BstDSI	CCRYGG	1 cut(s)	507
BstENI	CCTNNNNNAGG	1 cut(s)	409
BstF5I	GGATG	2 cut(s)	108, 517
BstFNI	CGCG	1 cut(s)	132
BstKTI	GATC	3 cut(s)	50, 147, 240
BstMBI	GATC	3 cut(s)	47, 144, 237
BstMCI	CGRYCG	1 cut(s)	93
BstMWI	GCNNNNNNNGC	3 cut(s)	164, 173, 512
BstNSI	RCATGY	1 cut(s)	17
BstSCI	CCNGG	1 cut(s)	437
BstUI	CGCG	1 cut(s)	132
BstV1I	GCAGC	3 cut(s)	22, 211, 257
BstV2I	GAAGAC	1 cut(s)	373
BstX2I	RGATCY	2 cut(s)	47, 144
BstYI	RGATCY	2 cut(s)	47, 144
BstZI	CGGCCG	1 cut(s)	90
BsuRI	GGCC	1 cut(s)	92
BtgI	CCRYGG	1 cut(s)	507
BtsCI	GGATG	2 cut(s)	108, 517
BtsIMutI	CAGTG	1 cut(s)	594
Cac8I	GCNNGC	2 cut(s)	15, 504
Cfr13I	GGNCC	1 cut(s)	24
Csp6I	GTAC	1 cut(s)	649
CviAII	CATG	2 cut(s)	14, 652
CviQI	GTAC	1 cut(s)	649
DdeI	CTNAG	3 cut(s)	141, 228, 659
DpnI	GATC	3 cut(s)	49, 146, 239
DpnII	GATC	3 cut(s)	47, 144, 237
EaeI	YGGCCR	1 cut(s)	90
EagI	CGGCCG	1 cut(s)	90
EciI	GGCGGA	1 cut(s)	60
EclXI	CGGCCG	1 cut(s)	90
Eco130I	CCWWGG	1 cut(s)	430
Eco47I	GGWCC	1 cut(s)	24
Eco52I	CGGCCG	1 cut(s)	90
Eco57I	CTGAAG	1 cut(s)	552
EcoNI	CCTNNNNNAGG	1 cut(s)	409
EcoT14I	CCWWGG	1 cut(s)	430
ErhI	CCWWGG	1 cut(s)	430
FaeI	CATG	2 cut(s)	17, 655
FaqI	GGGAC	1 cut(s)	10
FatI	CATG	2 cut(s)	13, 651
FauI	CCCGC	2 cut(s)	58, 137
FauNDI	CATATG	1 cut(s)	388
FblI	GTMKAC	2 cut(s)	107, 443
Fnu4HI	GCNGC	4 cut(s)	11, 90, 225, 271
FokI	GGATG	2 cut(s)	115, 524
Fsp4HI	GCNGC	4 cut(s)	11, 90, 225, 271
FspBI	CTAG	1 cut(s)	486
GluI	GCNGC	4 cut(s)	11, 90, 225, 271
HaeIII	GGCC	1 cut(s)	92
HapII	CCGG	1 cut(s)	438
Hin1II	CATG	2 cut(s)	17, 655
HincII	GTYRAC	1 cut(s)	108
HindII	GTYRAC	1 cut(s)	108
HpaII	CCGG	1 cut(s)	438
HphI	GGTGA	3 cut(s)	118, 474, 611
Hpy166II	GTNNAC	2 cut(s)	108, 444
Hpy188I	TCNGA	2 cut(s)	102, 532
Hpy8I	GTNNAC	2 cut(s)	108, 444
HpyAV	CCTTC	1 cut(s)	359
HpyCH4III	ACNGT	3 cut(s)	80, 119, 562
HpyCH4V	TGCA	4 cut(s)	150, 211, 278, 569
HpyF10VI	GCNNNNNNNGC	3 cut(s)	164, 173, 512
HpyF3I	CTNAG	3 cut(s)	141, 228, 659
Hsp92II	CATG	2 cut(s)	17, 655
Kzo9I	GATC	3 cut(s)	47, 144, 237
LmnI	GCTCC	2 cut(s)	68, 431
LpnPI	CCDG	9 cut(s)	7, 64, 96, 168, 288, 451, 516, 582, 589
Lsp1109I	GCAGC	3 cut(s)	22, 211, 257
LweI	GCATC	4 cut(s)	256, 382, 502, 578
MaeI	CTAG	1 cut(s)	486
MaeIII	GTNAC	4 cut(s)	113, 480, 517, 599
MalI	GATC	3 cut(s)	49, 146, 239
MboI	GATC	3 cut(s)	47, 144, 237
MboII	GAAGA	1 cut(s)	373
MflI	RGATCY	2 cut(s)	47, 144
MluCI	AATT	3 cut(s)	73, 152, 612
MmeI	TCCRAC	2 cut(s)	321, 397
MnlI	CCTC	5 cut(s)	187, 405, 501, 532, 654
MseI	TTAA	1 cut(s)	555
MspI	CCGG	1 cut(s)	438
MspR9I	CCNGG	1 cut(s)	439
MvnI	CGCG	1 cut(s)	132
MwoI	GCNNNNNNNGC	3 cut(s)	164, 173, 512
NciI	CCSGG	1 cut(s)	439
NdeI	CATATG	1 cut(s)	388
NdeII	GATC	3 cut(s)	47, 144, 237
NlaIII	CATG	2 cut(s)	17, 655
NlaIV	GGNNCC	5 cut(s)	26, 49, 70, 403, 436
NmuCI	GTSAC	2 cut(s)	480, 599
NspI	RCATGY	1 cut(s)	17
PaeI	GCATGC	1 cut(s)	17
PkrI	GCNGC	4 cut(s)	12, 91, 226, 272
PspN4I	GGNNCC	5 cut(s)	26, 49, 70, 403, 436
PspPI	GGNCC	1 cut(s)	24
PsuI	RGATCY	2 cut(s)	47, 144
RsaI	GTAC	1 cut(s)	650
RsaNI	GTAC	1 cut(s)	649
SalI	GTCGAC	1 cut(s)	106
SaqAI	TTAA	1 cut(s)	555
SatI	GCNGC	4 cut(s)	11, 90, 225, 271
Sau3AI	GATC	3 cut(s)	47, 144, 237
Sau96I	GGNCC	1 cut(s)	24
ScrFI	CCNGG	1 cut(s)	439
SetI	ASST	7 cut(s)	169, 196, 272, 370, 428, 436, 487
SfaNI	GCATC	4 cut(s)	256, 382, 502, 578
SinI	GGWCC	1 cut(s)	24
SphI	GCATGC	1 cut(s)	17
Sse9I	AATT	3 cut(s)	73, 152, 612
SsiI	CCGC	4 cut(s)	45, 65, 89, 130
SspMI	CTAG	1 cut(s)	486
StyD4I	CCNGG	1 cut(s)	437
StyI	CCWWGG	1 cut(s)	430
TaaI	ACNGT	3 cut(s)	80, 119, 562
TaqI	TCGA	1 cut(s)	107
TasI	AATT	3 cut(s)	73, 152, 612
TatI	WGTACW	1 cut(s)	648
TauI	GCSGC	1 cut(s)	92
Tru1I	TTAA	1 cut(s)	555
Tru9I	TTAA	1 cut(s)	555
TscAI	CASTG	1 cut(s)	601
TseFI	GTSAC	2 cut(s)	480, 599
TseI	GCWGC	3 cut(s)	10, 224, 270
Tsp45I	GTSAC	2 cut(s)	480, 599
TspRI	CASTG	1 cut(s)	601
VpaK11BI	GGWCC	1 cut(s)	24
XagI	CCTNNNNNAGG	1 cut(s)	409
XceI	RCATGY	1 cut(s)	17
XmiI	GTMKAC	2 cut(s)	107, 443
XspI	CTAG	1 cut(s)	486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.