The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G60820 AT3G60820 AT3G60820 |
| fragaria_vesca | FvH4_7g11920 FvH4_7g11920 |
| malus_domestica | MD02G1204000.v1.1 MD07G1122000.v1.1 |
| prunus_persica | Prupe.2G145800_v2.0.a1 |
| pyrus_communis | pycom02g16630 pycom07g11030 |
| rosa_chinensis | RchiOBHm_Chr1g0350601 |
| rosa_laevigata | RLG00000028469 |
| rosa_multiflora | Rmu_sc0014368.1_g000004 Rmu_sc0030263.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00304680 |
| rosa_rugosa | Rorug01G0212500 |
| rosa_samantha | Rh1AG227000 Rh1BG195700 Rh1CG211800 Rh1DG223800 |
| rosa_wichuraiana | Rw1G019620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 635 |
| AccI | GTMKAC | 1 cut(s) | 107 |
| AccII | CGCG | 2 cut(s) | 132, 335 |
| AciI | CCGC | 7 cut(s) | 45, 90, 130, 158, 316, 524, 629 |
| AcuI | CTGAAG | 1 cut(s) | 552 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 99, 280, 411, 628 |
| AflIII | ACRYGT | 1 cut(s) | 333 |
| AgeI | ACCGGT | 1 cut(s) | 110 |
| AgsI | TTSAA | 2 cut(s) | 191, 478 |
| AjnI | CCWGG | 1 cut(s) | 507 |
| AluBI | AGCT | 7 cut(s) | 167, 194, 206, 227, 270, 426, 658 |
| AluI | AGCT | 7 cut(s) | 167, 194, 206, 227, 270, 426, 658 |
| Alw26I | GTCTC | 1 cut(s) | 486 |
| ApeKI | GCWGC | 3 cut(s) | 10, 224, 270 |
| AsiGI | ACCGGT | 1 cut(s) | 110 |
| AsiSI | GCGATCGC | 1 cut(s) | 63 |
| AspS9I | GGNCC | 2 cut(s) | 24, 48 |
| AsuHPI | GGTGA | 1 cut(s) | 118 |
| AvaII | GGWCC | 2 cut(s) | 24, 48 |
| BanI | GGYRCC | 1 cut(s) | 635 |
| BbsI | GAAGAC | 1 cut(s) | 373 |
| BbvCI | CCTCAGC | 1 cut(s) | 659 |
| BbvI | GCAGC | 3 cut(s) | 22, 236, 257 |
| BccI | CCATC | 2 cut(s) | 274, 626 |
| BciT130I | CCWGG | 1 cut(s) | 509 |
| BcoDI | GTCTC | 1 cut(s) | 486 |
| BfaI | CTAG | 2 cut(s) | 486, 608 |
| BisI | GCNGC | 4 cut(s) | 11, 90, 225, 271 |
| BlpI | GCTNAGC | 1 cut(s) | 228 |
| BlsI | GCNGC | 4 cut(s) | 12, 91, 226, 272 |
| Bme1390I | CCNGG | 1 cut(s) | 509 |
| Bme18I | GGWCC | 2 cut(s) | 24, 48 |
| BmgT120I | GGNCC | 2 cut(s) | 24, 48 |
| BmiI | GGNNCC | 5 cut(s) | 26, 49, 70, 403, 637 |
| BmrFI | CCNGG | 1 cut(s) | 509 |
| BmsI | GCATC | 4 cut(s) | 256, 382, 502, 578 |
| BpiI | GAAGAC | 1 cut(s) | 373 |
| Bpu10I | CCTNAGC | 1 cut(s) | 659 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 228 |
| BsaJI | CCNNGG | 2 cut(s) | 430, 507 |
| BsaWI | WCCGGW | 1 cut(s) | 110 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 99, 280, 411, 628 |
| Bse118I | RCCGGY | 1 cut(s) | 110 |
| Bse1I | ACTGG | 2 cut(s) | 26, 601 |
| BseBI | CCWGG | 1 cut(s) | 509 |
| BseDI | CCNNGG | 2 cut(s) | 430, 507 |
| BseGI | GGATG | 3 cut(s) | 108, 517, 637 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 99, 280, 411, 628 |
| BseMII | CTCAG | 1 cut(s) | 650 |
| BseNI | ACTGG | 2 cut(s) | 26, 601 |
| BseXI | GCAGC | 3 cut(s) | 22, 236, 257 |
| Bsh1236I | CGCG | 2 cut(s) | 132, 335 |
| Bsh1285I | CGRYCG | 3 cut(s) | 63, 111, 546 |
| BshNI | GGYRCC | 1 cut(s) | 635 |
| BshTI | ACCGGT | 1 cut(s) | 110 |
| BsiEI | CGRYCG | 3 cut(s) | 63, 111, 546 |
| BsiSI | CCGG | 2 cut(s) | 66, 111 |
| BslFI | GGGAC | 1 cut(s) | 10 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 99, 280, 411, 628 |
| BsmAI | GTCTC | 1 cut(s) | 486 |
| BsmFI | GGGAC | 1 cut(s) | 10 |
| Bsp143I | GATC | 2 cut(s) | 60, 543 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 228 |
| BspACI | CCGC | 7 cut(s) | 45, 90, 130, 158, 316, 524, 629 |
| BspCNI | CTCAG | 1 cut(s) | 651 |
| BspFNI | CGCG | 2 cut(s) | 132, 335 |
| BspLI | GGNNCC | 5 cut(s) | 26, 49, 70, 403, 637 |
| BspT107I | GGYRCC | 1 cut(s) | 635 |
| BsrFI | RCCGGY | 1 cut(s) | 110 |
| BsrI | ACTGG | 2 cut(s) | 26, 601 |
| BssAI | RCCGGY | 1 cut(s) | 110 |
| BssECI | CCNNGG | 2 cut(s) | 430, 507 |
| BssMI | GATC | 2 cut(s) | 60, 543 |
| BssT1I | CCWWGG | 1 cut(s) | 430 |
| Bst2UI | CCWGG | 1 cut(s) | 509 |
| Bst4CI | ACNGT | 2 cut(s) | 80, 119 |
| BstC8I | GCNNGC | 2 cut(s) | 15, 504 |
| BstDEI | CTNAG | 3 cut(s) | 228, 355, 659 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 409 |
| BstF5I | GGATG | 3 cut(s) | 108, 517, 637 |
| BstFNI | CGCG | 2 cut(s) | 132, 335 |
| BstKTI | GATC | 2 cut(s) | 63, 546 |
| BstMAI | GTCTC | 1 cut(s) | 486 |
| BstMBI | GATC | 2 cut(s) | 60, 543 |
| BstMCI | CGRYCG | 3 cut(s) | 63, 111, 546 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 164, 173, 512 |
| BstNI | CCWGG | 1 cut(s) | 509 |
| BstSCI | CCNGG | 1 cut(s) | 507 |
| BstUI | CGCG | 2 cut(s) | 132, 335 |
| BstV1I | GCAGC | 3 cut(s) | 22, 236, 257 |
| BstV2I | GAAGAC | 1 cut(s) | 373 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 437 |
| BtgZI | GCGATG | 1 cut(s) | 293 |
| BtsCI | GGATG | 3 cut(s) | 108, 517, 637 |
| BtsIMutI | CAGTG | 1 cut(s) | 594 |
| Cac8I | GCNNGC | 2 cut(s) | 15, 504 |
| Cfr10I | RCCGGY | 1 cut(s) | 110 |
| Cfr13I | GGNCC | 2 cut(s) | 24, 48 |
| CseI | GACGC | 1 cut(s) | 367 |
| CspAI | ACCGGT | 1 cut(s) | 110 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 480, 515 |
| DdeI | CTNAG | 3 cut(s) | 228, 355, 659 |
| DpnI | GATC | 2 cut(s) | 62, 545 |
| DpnII | GATC | 2 cut(s) | 60, 543 |
| Eco130I | CCWWGG | 1 cut(s) | 430 |
| Eco47I | GGWCC | 2 cut(s) | 24, 48 |
| Eco57I | CTGAAG | 1 cut(s) | 552 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 409 |
| EcoO109I | RGGNCCY | 1 cut(s) | 48 |
| EcoRII | CCWGG | 1 cut(s) | 507 |
| EcoT14I | CCWWGG | 1 cut(s) | 430 |
| ErhI | CCWWGG | 1 cut(s) | 430 |
| FaiI | YATR | 8 cut(s) | 255, 388, 390, 408, 423, 645, 651, 653 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 305, 337 |
| FaqI | GGGAC | 1 cut(s) | 10 |
| FauI | CCCGC | 2 cut(s) | 38, 137 |
| FauNDI | CATATG | 1 cut(s) | 388 |
| FblI | GTMKAC | 1 cut(s) | 107 |
| Fnu4HI | GCNGC | 4 cut(s) | 11, 90, 225, 271 |
| FokI | GGATG | 3 cut(s) | 115, 524, 644 |
| Fsp4HI | GCNGC | 4 cut(s) | 11, 90, 225, 271 |
| FspBI | CTAG | 2 cut(s) | 486, 608 |
| GluI | GCNGC | 4 cut(s) | 11, 90, 225, 271 |
| HapII | CCGG | 2 cut(s) | 66, 111 |
| HgaI | GACGC | 1 cut(s) | 367 |
| HincII | GTYRAC | 1 cut(s) | 108 |
| HindII | GTYRAC | 1 cut(s) | 108 |
| HindIII | AAGCTT | 1 cut(s) | 204 |
| HpaII | CCGG | 2 cut(s) | 66, 111 |
| HphI | GGTGA | 1 cut(s) | 118 |
| Hpy166II | GTNNAC | 1 cut(s) | 108 |
| Hpy188I | TCNGA | 2 cut(s) | 102, 532 |
| Hpy188III | TCNNGA | 1 cut(s) | 464 |
| Hpy8I | GTNNAC | 1 cut(s) | 108 |
| HpyAV | CCTTC | 2 cut(s) | 359, 658 |
| HpyCH4III | ACNGT | 2 cut(s) | 80, 119 |
| HpyCH4V | TGCA | 4 cut(s) | 150, 211, 569, 575 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 164, 173, 512 |
| HpyF3I | CTNAG | 3 cut(s) | 228, 355, 659 |
| Kzo9I | GATC | 2 cut(s) | 60, 543 |
| LmnI | GCTCC | 3 cut(s) | 68, 431, 655 |
| Lsp1109I | GCAGC | 3 cut(s) | 22, 236, 257 |
| LweI | GCATC | 4 cut(s) | 256, 382, 502, 578 |
| MaeI | CTAG | 2 cut(s) | 486, 608 |
| MaeIII | GTNAC | 2 cut(s) | 113, 517 |
| MalI | GATC | 2 cut(s) | 62, 545 |
| MboI | GATC | 2 cut(s) | 60, 543 |
| MboII | GAAGA | 3 cut(s) | 171, 313, 373 |
| MfeI | CAATTG | 1 cut(s) | 473 |
| MluCI | AATT | 2 cut(s) | 152, 473 |
| MluI | ACGCGT | 1 cut(s) | 333 |
| MmeI | TCCRAC | 1 cut(s) | 321 |
| MnlI | CCTC | 3 cut(s) | 405, 632, 654 |
| MseI | TTAA | 1 cut(s) | 339 |
| MspA1I | CMGCKG | 1 cut(s) | 526 |
| MspI | CCGG | 2 cut(s) | 66, 111 |
| MspR9I | CCNGG | 1 cut(s) | 509 |
| MunI | CAATTG | 1 cut(s) | 473 |
| MvaI | CCWGG | 1 cut(s) | 509 |
| MvnI | CGCG | 2 cut(s) | 132, 335 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 164, 173, 512 |
| NdeI | CATATG | 1 cut(s) | 388 |
| NdeII | GATC | 2 cut(s) | 60, 543 |
| NlaIV | GGNNCC | 5 cut(s) | 26, 49, 70, 403, 637 |
| NmuCI | GTSAC | 1 cut(s) | 517 |
| PflFI | GACNNNGTC | 1 cut(s) | 551 |
| PinAI | ACCGGT | 1 cut(s) | 110 |
| PkrI | GCNGC | 4 cut(s) | 12, 91, 226, 272 |
| Ple19I | CGATCG | 2 cut(s) | 63, 546 |
| PpuMI | RGGWCCY | 1 cut(s) | 48 |
| Psp5II | RGGWCCY | 1 cut(s) | 48 |
| Psp6I | CCWGG | 1 cut(s) | 507 |
| PspGI | CCWGG | 1 cut(s) | 507 |
| PspN4I | GGNNCC | 5 cut(s) | 26, 49, 70, 403, 637 |
| PspPI | GGNCC | 2 cut(s) | 24, 48 |
| PspPPI | RGGWCCY | 1 cut(s) | 48 |
| PsyI | GACNNNGTC | 1 cut(s) | 551 |
| PvuI | CGATCG | 2 cut(s) | 63, 546 |
| RgaI | GCGATCGC | 1 cut(s) | 63 |
| SalI | GTCGAC | 1 cut(s) | 106 |
| SaqAI | TTAA | 1 cut(s) | 339 |
| SatI | GCNGC | 4 cut(s) | 11, 90, 225, 271 |
| Sau3AI | GATC | 2 cut(s) | 60, 543 |
| Sau96I | GGNCC | 2 cut(s) | 24, 48 |
| ScrFI | CCNGG | 1 cut(s) | 509 |
| SetI | ASST | 9 cut(s) | 169, 196, 208, 229, 272, 370, 428, 436, 660 |
| SfaAI | GCGATCGC | 1 cut(s) | 63 |
| SfaNI | GCATC | 4 cut(s) | 256, 382, 502, 578 |
| SgfI | GCGATCGC | 1 cut(s) | 63 |
| SinI | GGWCC | 2 cut(s) | 24, 48 |
| Sse9I | AATT | 2 cut(s) | 152, 473 |
| SsiI | CCGC | 7 cut(s) | 45, 90, 130, 158, 316, 524, 629 |
| SspMI | CTAG | 2 cut(s) | 486, 608 |
| StyD4I | CCNGG | 1 cut(s) | 507 |
| StyI | CCWWGG | 1 cut(s) | 430 |
| TaaI | ACNGT | 2 cut(s) | 80, 119 |
| TaqI | TCGA | 2 cut(s) | 107, 546 |
| TasI | AATT | 2 cut(s) | 152, 473 |
| TauI | GCSGC | 1 cut(s) | 92 |
| Tru1I | TTAA | 1 cut(s) | 339 |
| Tru9I | TTAA | 1 cut(s) | 339 |
| TscAI | CASTG | 1 cut(s) | 601 |
| TseFI | GTSAC | 1 cut(s) | 517 |
| TseI | GCWGC | 3 cut(s) | 10, 224, 270 |
| Tsp45I | GTSAC | 1 cut(s) | 517 |
| TspRI | CASTG | 1 cut(s) | 601 |
| Tth111I | GACNNNGTC | 1 cut(s) | 551 |
| VpaK11BI | GGWCC | 2 cut(s) | 24, 48 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 409 |
| XmiI | GTMKAC | 1 cut(s) | 107 |
| XspI | CTAG | 2 cut(s) | 486, 608 |