Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0009715

Physical Location & Seq

Genomic Coordinates Forward (+)

21193560 .. 21197311

Gene Structure 3752 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G159500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 831 bp

ATGTTGATGGGTCACACGGATGGTCTATCTACGCCTCGTTCCTCGAGGACCAAGCTACTTCCTTATGCCGAATCCGATATAGATGAGGATGACAGTGCAGGCTGTTCTGAGAAAATACTATACTCGGCCTCATTTGAAGAGCTTGCAATGAATATCGTTAAGTATGACACTGTTATATGGCTTTCTATATCAATATTGCTGGTTTTAGCTTGGGGAGTTGGCATCATCATGCTGTTATATCTGCCCTTTAAGAGATATGTTCTTCAGAAGGATATTTCCTCGCGCAAACTAAATGTTACACCTACTGAGGTTGTTTACAAGGTTTCAAGGCCATCTTTCATACCCTTCTGGGGCATCACTACAATTGAGAAGCATGTACCCCTTTCCCTGGTGATTGATATCATTATAGAACAAGGTTGCTTGCAGTCAAGGTATGGAATTCATACCTTTAGAATTGAAAGTATAGCACATGGAAAGGCTGCGGCTGTAGATGAACTACAGGTTCAAGGGGTTTCTAACCCTAGTGGTTTGAGGAAGGTCATCATAACAGAAGCTGCAAAAGCCATACAAGATAGTGGTATAAGTTGGAAGCCTACTGCTCCCACTGCTGAAGGGGAAAGCATGGCTCGCACTGGATCATTGAGTGAGGGACCTGCTGTTTTGAGATCACCATCTAAAAGCTTAAAGATGGCAGCTTCACCACGCTATGCCTCAATAGAACGCAGAGGTGTAGTACCTGGGGAATTGCTGCTTAATAAGATTGAAGAAGTCAATAAATCTGTGAAGAAAATCGAGTTCTTAATAGAGAAGTCTCATACTCAGCCTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

277

Amino Acids

30.41

Weight (kDa)

7.74

Isoelectric Point (pI)

60.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009715)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g13540 FvH4_7g13540 FvH4_7g13540
malus_domestica	MD01G1048500.v1.1
prunus_persica	Prupe.2G159500_v2.0.a1 Prupe.2G159500_v2.0.a1 Prupe.2G159500_v2.0.a1 Prupe.2G159500_v2.0.a1 Prupe.2G159500_v2.0.a1
pyrus_communis	pycom01g07370
rosa_chinensis	RchiOBHm_Chr1g0353101
rosa_laevigata	RLG00000028290
rosa_multiflora	Rmu_sc0001207.1_g000083
rosa_roxburghii	Rroxscaffold_4G00302060
rosa_rugosa	Rorug01G0233600 Rorug01G0233600
rosa_samantha	Rh1AG247400 Rh1CG230900 Rh1DG243300
rosa_wichuraiana	Rw0G018100 Rw1G021420 Rw1G021510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	43
Acc36I	ACCTGC	1 cut(s)	661
AccII	CGCG	1 cut(s)	283
AciI	CCGC	1 cut(s)	482
AclWI	GGATC	1 cut(s)	643
AcsI	RAATTY	1 cut(s)	438
AcuI	CTGAAG	2 cut(s)	248, 630
AfaI	GTAC	2 cut(s)	378, 735
AfiI	CCNNNNNNNGG	2 cut(s)	350, 388
AgsI	TTSAA	5 cut(s)	137, 327, 458, 506, 764
AjnI	CCWGG	2 cut(s)	387, 736
AluBI	AGCT	6 cut(s)	55, 142, 209, 554, 681, 695
AluI	AGCT	6 cut(s)	55, 142, 209, 554, 681, 695
Alw26I	GTCTC	1 cut(s)	816
AlwI	GGATC	1 cut(s)	643
AlwNI	CAGNNNCTG	1 cut(s)	554
Ama87I	CYCGRG	1 cut(s)	43
AoxI	GGCC	2 cut(s)	126, 329
ApeKI	GCWGC	4 cut(s)	479, 554, 692, 748
ApoI	RAATTY	1 cut(s)	438
AspLEI	GCGC	1 cut(s)	285
AspS9I	GGNCC	2 cut(s)	48, 650
AsuHPI	GGTGA	3 cut(s)	403, 660, 690
AvaI	CYCGRG	1 cut(s)	43
AvaII	GGWCC	2 cut(s)	48, 650
BbvI	GCAGC	4 cut(s)	466, 541, 704, 735
BccI	CCATC	4 cut(s)	14, 340, 679, 682
BciT130I	CCWGG	2 cut(s)	389, 738
BcoDI	GTCTC	1 cut(s)	816
BfaI	CTAG	1 cut(s)	522
BfmI	CTRYAG	2 cut(s)	486, 497
BfuAI	ACCTGC	1 cut(s)	661
BisI	GCNGC	5 cut(s)	480, 483, 555, 693, 749
BlsI	GCNGC	5 cut(s)	481, 484, 556, 694, 750
Bme1390I	CCNGG	2 cut(s)	389, 738
Bme18I	GGWCC	2 cut(s)	48, 650
BmeT110I	CYCGRG	1 cut(s)	43
BmgT120I	GGNCC	2 cut(s)	48, 650
BmiI	GGNNCC	1 cut(s)	651
BmrFI	CCNGG	2 cut(s)	389, 738
BmsI	GCATC	2 cut(s)	231, 363
BsaBI	GATNNNNATC	2 cut(s)	398, 670
BsaJI	CCNNGG	2 cut(s)	387, 737
Bsc4I	CCNNNNNNNGG	2 cut(s)	350, 388
Bse1I	ACTGG	1 cut(s)	637
Bse3DI	GCAATG	1 cut(s)	153
Bse8I	GATNNNNATC	2 cut(s)	398, 670
BseBI	CCWGG	2 cut(s)	389, 738
BseDI	CCNNGG	2 cut(s)	387, 737
BseGI	GGATG	2 cut(s)	25, 94
BseJI	GATNNNNATC	2 cut(s)	398, 670
BseLI	CCNNNNNNNGG	2 cut(s)	350, 388
BseMI	GCAATG	1 cut(s)	153
BseMII	CTCAG	3 cut(s)	99, 297, 816
BseNI	ACTGG	1 cut(s)	637
BseXI	GCAGC	4 cut(s)	466, 541, 704, 735
BsgI	GTGCAG	1 cut(s)	117
Bsh1236I	CGCG	1 cut(s)	283
BshFI	GGCC	2 cut(s)	128, 331
BsiHKCI	CYCGRG	1 cut(s)	43
BslFI	GGGAC	1 cut(s)	663
BslI	CCNNNNNNNGG	2 cut(s)	350, 388
BsmAI	GTCTC	1 cut(s)	816
BsmFI	GGGAC	1 cut(s)	663
BsnI	GGCC	2 cut(s)	128, 331
BsoBI	CYCGRG	1 cut(s)	43
Bsp143I	GATC	2 cut(s)	635, 665
BspACI	CCGC	1 cut(s)	482
BspANI	GGCC	2 cut(s)	128, 331
BspCNI	CTCAG	3 cut(s)	100, 298, 817
BspFNI	CGCG	1 cut(s)	283
BspLI	GGNNCC	1 cut(s)	651
BspMI	ACCTGC	1 cut(s)	661
BspPI	GGATC	1 cut(s)	643
BspQI	GCTCTTC	1 cut(s)	132
BsrDI	GCAATG	1 cut(s)	153
BsrI	ACTGG	1 cut(s)	637
BssECI	CCNNGG	2 cut(s)	387, 737
BssMI	GATC	2 cut(s)	635, 665
Bst2UI	CCWGG	2 cut(s)	389, 738
Bst4CI	ACNGT	2 cut(s)	95, 172
Bst6I	CTCTTC	1 cut(s)	132
BstC8I	GCNNGC	4 cut(s)	100, 144, 422, 628
BstDEI	CTNAG	4 cut(s)	108, 306, 819, 825
BstF5I	GGATG	2 cut(s)	25, 94
BstFNI	CGCG	1 cut(s)	283
BstHHI	GCGC	1 cut(s)	285
BstKTI	GATC	2 cut(s)	638, 668
BstMAI	GTCTC	1 cut(s)	816
BstMBI	GATC	2 cut(s)	635, 665
BstMWI	GCNNNNNNNGC	3 cut(s)	560, 605, 627
BstNI	CCWGG	2 cut(s)	389, 738
BstNSI	RCATGY	1 cut(s)	377
BstSCI	CCNGG	2 cut(s)	387, 736
BstSFI	CTRYAG	2 cut(s)	486, 497
BstUI	CGCG	1 cut(s)	283
BstV1I	GCAGC	4 cut(s)	466, 541, 704, 735
BsuRI	GGCC	2 cut(s)	128, 331
BtsCI	GGATG	2 cut(s)	25, 94
BtsI	GCAGTG	1 cut(s)	603
BtsIMutI	CAGTG	4 cut(s)	100, 168, 603, 630
BveI	ACCTGC	1 cut(s)	661
Cac8I	GCNNGC	4 cut(s)	100, 144, 422, 628
CaiI	CAGNNNCTG	1 cut(s)	554
CfoI	GCGC	1 cut(s)	285
Cfr13I	GGNCC	2 cut(s)	48, 650
Csp6I	GTAC	2 cut(s)	377, 734
CviAII	CATG	4 cut(s)	229, 374, 470, 622
CviQI	GTAC	2 cut(s)	377, 734
DdeI	CTNAG	4 cut(s)	108, 306, 819, 825
DpnI	GATC	2 cut(s)	637, 667
DpnII	GATC	2 cut(s)	635, 665
Eam1104I	CTCTTC	1 cut(s)	132
EarI	CTCTTC	1 cut(s)	132
Eco32I	GATATC	1 cut(s)	400
Eco47I	GGWCC	2 cut(s)	48, 650
Eco57I	CTGAAG	2 cut(s)	248, 630
Eco88I	CYCGRG	1 cut(s)	43
EcoO109I	RGGNCCY	1 cut(s)	650
EcoRI	GAATTC	1 cut(s)	438
EcoRII	CCWGG	2 cut(s)	387, 736
EcoRV	GATATC	1 cut(s)	400
FaeI	CATG	4 cut(s)	232, 377, 473, 625
FalI	AAGNNNNNCTT	2 cut(s)	319, 351
FaqI	GGGAC	1 cut(s)	663
FatI	CATG	4 cut(s)	228, 373, 469, 621
Fnu4HI	GCNGC	5 cut(s)	480, 483, 555, 693, 749
FokI	GGATG	2 cut(s)	32, 101
Fsp4HI	GCNGC	5 cut(s)	480, 483, 555, 693, 749
FspBI	CTAG	1 cut(s)	522
GlaI	GCGC	1 cut(s)	284
GluI	GCNGC	5 cut(s)	480, 483, 555, 693, 749
HaeIII	GGCC	2 cut(s)	128, 331
HhaI	GCGC	1 cut(s)	285
Hin1II	CATG	4 cut(s)	232, 377, 473, 625
Hin6I	GCGC	1 cut(s)	283
HinP1I	GCGC	1 cut(s)	283
HindIII	AAGCTT	1 cut(s)	679
HinfI	GANTC	1 cut(s)	71
HphI	GGTGA	3 cut(s)	403, 660, 690
Hpy166II	GTNNAC	1 cut(s)	316
Hpy188I	TCNGA	3 cut(s)	76, 109, 267
Hpy8I	GTNNAC	1 cut(s)	316
HpyAV	CCTTC	4 cut(s)	262, 355, 529, 605
HpyCH4III	ACNGT	2 cut(s)	95, 172
HpyCH4V	TGCA	4 cut(s)	98, 146, 424, 557
HpyF10VI	GCNNNNNNNGC	3 cut(s)	560, 605, 627
HpyF3I	CTNAG	4 cut(s)	108, 306, 819, 825
Hsp92II	CATG	4 cut(s)	232, 377, 473, 625
HspAI	GCGC	1 cut(s)	283
Kzo9I	GATC	2 cut(s)	635, 665
LguI	GCTCTTC	1 cut(s)	132
LmnI	GCTCC	1 cut(s)	604
Lsp1109I	GCAGC	4 cut(s)	466, 541, 704, 735
LweI	GCATC	2 cut(s)	231, 363
MaeI	CTAG	1 cut(s)	522
MaeIII	GTNAC	2 cut(s)	11, 295
MalI	GATC	2 cut(s)	637, 667
MboI	GATC	2 cut(s)	635, 665
MboII	GAAGA	4 cut(s)	149, 254, 776, 796
MfeI	CAATTG	1 cut(s)	363
MluCI	AATT	4 cut(s)	363, 438, 453, 743
MmeI	TCCRAC	1 cut(s)	566
MseI	TTAA	5 cut(s)	159, 249, 683, 753, 800
MslI	CAYNNNNRTG	2 cut(s)	18, 227
MspR9I	CCNGG	2 cut(s)	389, 738
MunI	CAATTG	1 cut(s)	363
MvaI	CCWGG	2 cut(s)	389, 738
MvnI	CGCG	1 cut(s)	283
MwoI	GCNNNNNNNGC	3 cut(s)	560, 605, 627
NdeII	GATC	2 cut(s)	635, 665
NlaIII	CATG	4 cut(s)	232, 377, 473, 625
NlaIV	GGNNCC	1 cut(s)	651
NmeAIII	GCCGAG	1 cut(s)	104
NmuCI	GTSAC	1 cut(s)	11
NspI	RCATGY	1 cut(s)	377
PaeR7I	CTCGAG	1 cut(s)	43
PciSI	GCTCTTC	1 cut(s)	132
PfeI	GAWTC	1 cut(s)	71
PkrI	GCNGC	5 cut(s)	481, 484, 556, 694, 750
PpuMI	RGGWCCY	1 cut(s)	650
Psp5II	RGGWCCY	1 cut(s)	650
Psp6I	CCWGG	2 cut(s)	387, 736
PspGI	CCWGG	2 cut(s)	387, 736
PspN4I	GGNNCC	1 cut(s)	651
PspPI	GGNCC	2 cut(s)	48, 650
PspPPI	RGGWCCY	1 cut(s)	650
PspXI	VCTCGAGB	1 cut(s)	43
PstNI	CAGNNNCTG	1 cut(s)	554
RsaI	GTAC	2 cut(s)	378, 735
RsaNI	GTAC	2 cut(s)	377, 734
RseI	CAYNNNNRTG	2 cut(s)	18, 227
SapI	GCTCTTC	1 cut(s)	132
SaqAI	TTAA	5 cut(s)	159, 249, 683, 753, 800
SatI	GCNGC	5 cut(s)	480, 483, 555, 693, 749
Sau3AI	GATC	2 cut(s)	635, 665
Sau96I	GGNCC	2 cut(s)	48, 650
ScrFI	CCNGG	2 cut(s)	389, 738
SfaNI	GCATC	2 cut(s)	231, 363
SfcI	CTRYAG	2 cut(s)	486, 497
Sfr274I	CTCGAG	1 cut(s)	43
SinI	GGWCC	2 cut(s)	48, 650
SlaI	CTCGAG	1 cut(s)	43
SmiMI	CAYNNNNRTG	2 cut(s)	18, 227
SmlI	CTYRAG	1 cut(s)	43
SmoI	CTYRAG	1 cut(s)	43
Sse9I	AATT	4 cut(s)	363, 438, 453, 743
SsiI	CCGC	1 cut(s)	482
SspI	AATATT	1 cut(s)	195
SspMI	CTAG	1 cut(s)	522
StyD4I	CCNGG	2 cut(s)	387, 736
TaaI	ACNGT	2 cut(s)	95, 172
TaqI	TCGA	2 cut(s)	44, 792
TasI	AATT	4 cut(s)	363, 438, 453, 743
TauI	GCSGC	1 cut(s)	485
TfiI	GAWTC	1 cut(s)	71
Tru1I	TTAA	5 cut(s)	159, 249, 683, 753, 800
Tru9I	TTAA	5 cut(s)	159, 249, 683, 753, 800
TscAI	CASTG	4 cut(s)	100, 175, 610, 637
TseFI	GTSAC	1 cut(s)	11
TseI	GCWGC	4 cut(s)	479, 554, 692, 748
Tsp45I	GTSAC	1 cut(s)	11
TspDTI	ATGAA	4 cut(s)	164, 328, 431, 507
TspGWI	ACGGA	1 cut(s)	32
TspRI	CASTG	4 cut(s)	100, 175, 610, 637
VpaK11BI	GGWCC	2 cut(s)	48, 650
XapI	RAATTY	1 cut(s)	438
XceI	RCATGY	1 cut(s)	377
XhoI	CTCGAG	1 cut(s)	43
XspI	CTAG	1 cut(s)	522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.