Prupe.2G200300_v2.0.a1
MYB Family

Protein LHY-like isoform X1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
23727771 .. 23731774
4004 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G200300.6

Sequence Viewer

Length: 1536 bp
ATGGAACCACACTCATCTAGGGAAGATTTGGCCATCAAGGCAAGAAAGCCATATACAATTACCAAGCAGCGAGAGCGATGGACACATGAGGAGCATAATAAGTTTCTTGAAGCCCTGAAGCTCTATGGCCGAGCATGGCAGCGCATTGAAGAACATATTGGAACAAAGACTGCTGTGCAGATCAGGAGTCATGCTCAGAAATTCTTTTCCAAGCTAGAGAAGGAGGCACACGTTAATGGTGTTCCCATAGGACAATCAATTGGCATTGATATTCCGCCTCCACGTCCCAAAAGAAAACCAAGCAATCCTTATCCTCGAAAGTCTAGTTCAGCTGCATCGACATGTGCCACATTGCATGTGGGAGCAAAGGTTGGAAAACTTTTATCATCAGCATCTTCTTCACGCTATAAACAAGTAGTGGACTTGGAGAAAGAACCACTTCATGAGAGACCTTTTGGAGAAGAAAAGGCAAATAATGCAGAAAATCAGGTAGCCAATTGCACAGAAGTCTTCACCTTGCTCCAAGATGATCATTGCTCTGTTTCTTCTGCAAACAATAATTCCATACCCTCACAGGTAGCACTTGGAAATGCTTGCACTTTAAGGGATGCAACAAATGAATCTCATGTCACTATTAAACTTAAAGGAAATCAGAATTTGAAGAAAATTGATGCCAAAATGATAGTTGGCGATAATGGCACAAGTGGAGCTCCAAAGTCAGGGAACACTAATAATGCTTTTCATAAGGAGTTGGTTCAAGGTGAGAAATTTTCAAGTCTTATTGTGTCTTCTCTGTTACAAAATCCTGCAGCCCATGCTGCGGCTAGCTCCACAGCCGCATTTTGGCCTTACGCAAATGCGAAAAATAGGGAAGACCCCCCAAGTATGGCAGCAATTGCTGCTGCCACTGTAACCGCTGCAACTGCTTGGTTGGCAGTCCATAGACTGCTTCCTTGTCAAATTGATTTTAGCTGTTCTCCCATCTCTATGACCCCTCCAGTTCCATCAATGGATACTGATCAAGCTCCTCCAGCCAAGAGAGAGAGAGGAGAGAGTTCTCTGCAAATTCCTTCCTTGCAGGATCAACAACTGGACTCAAAACACACGGAAGCTGTGGAAGCTCAACATTCAAACATTGCAAAGGCTAATACTGATGATAAGAAGGACGTTGCGTCAACTGGAGAAGTTCATGATTCAAACCCTGCAAAGAGCAGAAAACAGGTTGACCGTTCCTCATATGGTTCCAACACACCATCCGACAGCAAAGACGAGACAGCTGCAATAGAGAAGAATGAGAAAGGGAAGGAAGAACAAAAAGAGCCTAATACAAGTCACCCAGCTGCTGAGTCTAGTCACCGTCGCAGTAGATGTGTCAGCAACGTGTATGATTCATGGAAAGAGGTCTCTGAAGAGGGGCGCCTGGCCTTTCATGCACTATTCTCAAGAGATGTATTACCCCAGAGTTTTTCACTTACACAGGACCTCAAGATTAAGGGGCATCAGAATGACGGTATGGAAGACTCAAAGAAAAGTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

512

Amino Acids

55.96

Weight (kDa)

8.48

Isoelectric Point (pI)

47.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1416
AciI CCGC 4 cut(s) 275, 821, 837, 915
AclWI GGATC 1 cut(s) 1089
AcoI YGGCCR 2 cut(s) 30, 127
AcsI RAATTY 4 cut(s) 200, 655, 767, 1065
AcuI CTGAAG 2 cut(s) 137, 1428
AcyI GRCGYC 1 cut(s) 1417
AfiI CCNNNNNNNGG 4 cut(s) 719, 820, 843, 886
AflIII ACRYGT 3 cut(s) 229, 341, 1380
AgsI TTSAA 7 cut(s) 110, 149, 661, 758, 774, 1131, 1197
AhdI GACNNNNNGTC 1 cut(s) 1171
AjiI CACGTC 1 cut(s) 284
AjnI CCWGG 1 cut(s) 1419
AjuI GAANNNNNNNTTGG 2 cut(s) 141, 173
Alw21I GWGCWC 1 cut(s) 712
Alw26I GTCTC 3 cut(s) 442, 1265, 1408
AlwI GGATC 1 cut(s) 1089
AlwNI CAGNNNCTG 1 cut(s) 1343
AoxI GGCC 4 cut(s) 30, 127, 845, 1422
ApoI RAATTY 4 cut(s) 200, 655, 767, 1065
Asp700I GAANNNNTTC 1 cut(s) 438
AspLEI GCGC 2 cut(s) 144, 1419
AspS9I GGNCC 1 cut(s) 1480
AsuHPI GGTGA 4 cut(s) 505, 773, 1325, 1346
AsuNHI GCTAGC 1 cut(s) 824
AvaII GGWCC 1 cut(s) 1480
BalI TGGCCA 1 cut(s) 32
BanI GGYRCC 1 cut(s) 1416
BanII GRGCYC 1 cut(s) 712
BbsI GAAGAC 4 cut(s) 502, 780, 879, 1524
Bbv12I GWGCWC 1 cut(s) 712
BccI CCATC 5 cut(s) 41, 72, 989, 1012, 1261
BcgI CGANNNNNNTGC 2 cut(s) 1259, 1293
BciT130I CCWGG 1 cut(s) 1421
BciVI GTATCC 1 cut(s) 1006
BclI TGATCA 2 cut(s) 529, 1018
BcoDI GTCTC 3 cut(s) 442, 1265, 1408
BfaI CTAG 5 cut(s) 18, 215, 324, 825, 1350
BfmI CTRYAG 1 cut(s) 807
BfoI RGCGCY 1 cut(s) 1420
BfuI GTATCC 1 cut(s) 1006
BglI GCCNNNNNGGC 1 cut(s) 38
Bme1390I CCNGG 1 cut(s) 1421
Bme18I GGWCC 1 cut(s) 1480
BmeRI GACNNNNNGTC 1 cut(s) 1171
BmgBI CACGTC 1 cut(s) 284
BmgT120I GGNCC 1 cut(s) 1480
BmiI GGNNCC 3 cut(s) 6, 1243, 1418
BmrFI CCNGG 1 cut(s) 1421
BmsI GCATC 5 cut(s) 344, 401, 598, 661, 1507
BmtI GCTAGC 1 cut(s) 828
BpiI GAAGAC 4 cut(s) 502, 780, 879, 1524
BplI GAGNNNNNCTC 2 cut(s) 178, 210
BpmI CTGGAG 3 cut(s) 981, 1014, 1200
BpuEI CTTGAG 2 cut(s) 1426, 1469
BsaBI GATNNNNATC 1 cut(s) 1017
BsaHI GRCGYC 1 cut(s) 1417
BsaI GGTCTC 2 cut(s) 442, 1408
BsaXI ACNNNNNCTCC 2 cut(s) 354, 384
Bsc4I CCNNNNNNNGG 4 cut(s) 719, 820, 843, 886
Bse1I ACTGG 3 cut(s) 998, 1095, 1183
Bse3DI GCAATG 3 cut(s) 350, 532, 1134
Bse8I GATNNNNATC 1 cut(s) 1017
BseBI CCWGG 1 cut(s) 1421
BseGI GGATG 2 cut(s) 613, 1253
BseJI GATNNNNATC 1 cut(s) 1017
BseLI CCNNNNNNNGG 4 cut(s) 719, 820, 843, 886
BseMI GCAATG 3 cut(s) 350, 532, 1134
BseMII CTCAG 2 cut(s) 209, 1335
BseNI ACTGG 3 cut(s) 998, 1095, 1183
BseRI GAGGAG 3 cut(s) 104, 1017, 1062
BseYI CCCAGC 1 cut(s) 1336
BsgI GTGCAG 1 cut(s) 197
BshFI GGCC 4 cut(s) 32, 129, 847, 1424
BshNI GGYRCC 1 cut(s) 1416
BsiHKAI GWGCWC 1 cut(s) 712
BslFI GGGAC 1 cut(s) 270
BslI CCNNNNNNNGG 4 cut(s) 719, 820, 843, 886
BsmAI GTCTC 3 cut(s) 442, 1265, 1408
BsmFI GGGAC 1 cut(s) 270
BsnI GGCC 4 cut(s) 32, 129, 847, 1424
Bso31I GGTCTC 2 cut(s) 442, 1408
Bsp1286I GDGCHC 1 cut(s) 712
Bsp143I GATC 4 cut(s) 180, 529, 1018, 1081
BspACI CCGC 4 cut(s) 275, 821, 837, 915
BspANI GGCC 4 cut(s) 32, 129, 847, 1424
BspCNI CTCAG 2 cut(s) 208, 1336
BspHI TCATGA 2 cut(s) 442, 1189
BspLI GGNNCC 3 cut(s) 6, 1243, 1418
BspMAI CTGCAG 1 cut(s) 811
BspOI GCTAGC 1 cut(s) 828
BspPI GGATC 1 cut(s) 1089
BspT107I GGYRCC 1 cut(s) 1416
BspTNI GGTCTC 2 cut(s) 442, 1408
BsrDI GCAATG 3 cut(s) 350, 532, 1134
BsrI ACTGG 3 cut(s) 998, 1095, 1183
BssMI GATC 4 cut(s) 180, 529, 1018, 1081
BssNI GRCGYC 1 cut(s) 1417
Bst2UI CCWGG 1 cut(s) 1421
Bst4CI ACNGT 4 cut(s) 910, 1229, 1358, 1511
Bst6I CTCTTC 1 cut(s) 1404
BstACI GRCGYC 1 cut(s) 1417
BstAPI GCANNNNNTGC 4 cut(s) 476, 815, 896, 899
BstC8I GCNNGC 2 cut(s) 595, 826
BstDEI CTNAG 2 cut(s) 195, 1344
BstF5I GGATG 2 cut(s) 613, 1253
BstH2I RGCGCY 1 cut(s) 1420
BstHHI GCGC 2 cut(s) 144, 1419
BstKTI GATC 4 cut(s) 183, 532, 1021, 1084
BstMAI GTCTC 3 cut(s) 442, 1265, 1408
BstMBI GATC 4 cut(s) 180, 529, 1018, 1081
BstNI CCWGG 1 cut(s) 1421
BstNSI RCATGY 2 cut(s) 345, 359
BstSCI CCNGG 1 cut(s) 1419
BstSFI CTRYAG 1 cut(s) 807
BstV2I GAAGAC 4 cut(s) 502, 780, 879, 1524
BsuI GTATCC 1 cut(s) 1006
BsuRI GGCC 4 cut(s) 32, 129, 847, 1424
BtgZI GCGATG 1 cut(s) 91
BtrI CACGTC 1 cut(s) 284
BtsCI GGATG 2 cut(s) 613, 1253
BtsIMutI CAGTG 1 cut(s) 906
Cac8I GCNNGC 2 cut(s) 595, 826
CaiI CAGNNNCTG 1 cut(s) 1343
CciI TCATGA 2 cut(s) 442, 1189
CfoI GCGC 2 cut(s) 144, 1419
Cfr13I GGNCC 1 cut(s) 1480
CseI GACGC 1 cut(s) 1161
DdeI CTNAG 2 cut(s) 195, 1344
DinI GGCGCC 1 cut(s) 1418
DpnI GATC 4 cut(s) 182, 531, 1020, 1083
DpnII GATC 4 cut(s) 180, 529, 1018, 1081
DriI GACNNNNNGTC 1 cut(s) 1171
EaeI YGGCCR 2 cut(s) 30, 127
Eam1104I CTCTTC 1 cut(s) 1404
Eam1105I GACNNNNNGTC 1 cut(s) 1171
EarI CTCTTC 1 cut(s) 1404
EciI GGCGGA 1 cut(s) 264
Ecl136II GAGCTC 1 cut(s) 710
Eco24I GRGCYC 1 cut(s) 712
Eco31I GGTCTC 2 cut(s) 442, 1408
Eco47I GGWCC 1 cut(s) 1480
Eco53kI GAGCTC 1 cut(s) 710
Eco57I CTGAAG 2 cut(s) 137, 1428
EcoICRI GAGCTC 1 cut(s) 710
EcoO109I RGGNCCY 1 cut(s) 1480
EcoRII CCWGG 1 cut(s) 1419
EcoT38I GRGCYC 1 cut(s) 712
EgeI GGCGCC 1 cut(s) 1418
EheI GGCGCC 1 cut(s) 1418
FalI AAGNNNNNCTT 4 cut(s) 292, 324, 423, 455
FaqI GGGAC 1 cut(s) 270
FauNDI CATATG 1 cut(s) 1237
FbaI TGATCA 2 cut(s) 529, 1018
FokI GGATG 2 cut(s) 620, 1240
FriOI GRGCYC 1 cut(s) 712
FspBI CTAG 5 cut(s) 18, 215, 324, 825, 1350
GlaI GCGC 2 cut(s) 143, 1418
GsaI CCCAGC 1 cut(s) 1340
GsuI CTGGAG 3 cut(s) 981, 1014, 1200
HaeII RGCGCY 1 cut(s) 1420
HaeIII GGCC 4 cut(s) 32, 129, 847, 1424
HgaI GACGC 1 cut(s) 1161
HhaI GCGC 2 cut(s) 144, 1419
Hin1I GRCGYC 1 cut(s) 1417
Hin6I GCGC 2 cut(s) 142, 1417
HinP1I GCGC 2 cut(s) 142, 1417
HincII GTYRAC 2 cut(s) 1176, 1225
HindII GTYRAC 2 cut(s) 1176, 1225
HinfI GANTC 7 cut(s) 187, 620, 1094, 1193, 1346, 1388, 1520
HphI GGTGA 4 cut(s) 505, 773, 1325, 1346
Hpy166II GTNNAC 3 cut(s) 421, 1176, 1225
Hpy188I TCNGA 5 cut(s) 198, 654, 1258, 1408, 1503
Hpy188III TCNNGA 6 cut(s) 107, 184, 443, 1190, 1443, 1486
Hpy8I GTNNAC 3 cut(s) 421, 1176, 1225
Hpy99I CGWCG 1 cut(s) 1362
HpyAV CCTTC 4 cut(s) 214, 1080, 1156, 1297
HpyCH4III ACNGT 4 cut(s) 910, 1229, 1358, 1511
HpyCH4IV ACGT 4 cut(s) 231, 283, 1167, 1380
HpyF3I CTNAG 2 cut(s) 195, 1344
HpySE526I ACGT 4 cut(s) 231, 283, 1167, 1380
Hsp92I GRCGYC 1 cut(s) 1417
HspAI GCGC 2 cut(s) 142, 1417
KasI GGCGCC 1 cut(s) 1416
Ksp22I TGATCA 2 cut(s) 529, 1018
Kzo9I GATC 4 cut(s) 180, 529, 1018, 1081
LmnI GCTCC 7 cut(s) 91, 362, 525, 707, 715, 833, 1030
LweI GCATC 5 cut(s) 344, 401, 598, 661, 1507
MaeI CTAG 5 cut(s) 18, 215, 324, 825, 1350
MaeII ACGT 4 cut(s) 231, 283, 1167, 1380
MaeIII GTNAC 5 cut(s) 628, 795, 910, 1331, 1352
MalI GATC 4 cut(s) 182, 531, 1020, 1083
MboI GATC 4 cut(s) 180, 529, 1018, 1081
MfeI CAATTG 3 cut(s) 258, 496, 894
MhlI GDGCHC 1 cut(s) 712
MlsI TGGCCA 1 cut(s) 32
MluNI TGGCCA 1 cut(s) 32
Mly113I GGCGCC 1 cut(s) 1417
MlyI GAGTC 4 cut(s) 196, 1088, 1355, 1514
MmeI TCCRAC 3 cut(s) 352, 1269, 1281
Mox20I TGGCCA 1 cut(s) 32
MroXI GAANNNNTTC 1 cut(s) 438
MscI TGGCCA 1 cut(s) 32
MseI TTAA 5 cut(s) 234, 602, 636, 642, 1491
MslI CAYNNNNRTG 4 cut(s) 234, 340, 986, 1503
Msp20I TGGCCA 1 cut(s) 32
MspA1I CMGCKG 4 cut(s) 332, 917, 1277, 1340
MspR9I CCNGG 1 cut(s) 1421
MunI CAATTG 3 cut(s) 258, 496, 894
MvaI CCWGG 1 cut(s) 1421
NarI GGCGCC 1 cut(s) 1417
NdeI CATATG 1 cut(s) 1237
NdeII GATC 4 cut(s) 180, 529, 1018, 1081
NheI GCTAGC 1 cut(s) 824
NlaIV GGNNCC 3 cut(s) 6, 1243, 1418
NmeAIII GCCGAG 1 cut(s) 155
NmuCI GTSAC 3 cut(s) 628, 1331, 1352
NspI RCATGY 2 cut(s) 345, 359
PagI TCATGA 2 cut(s) 442, 1189
PciI ACATGT 1 cut(s) 341
PdmI GAANNNNTTC 1 cut(s) 438
PfeI GAWTC 3 cut(s) 620, 1193, 1388
PleI GAGTC 4 cut(s) 195, 1088, 1354, 1514
PluTI GGCGCC 1 cut(s) 1420
PpsI GAGTC 4 cut(s) 195, 1088, 1354, 1514
PpuMI RGGWCCY 1 cut(s) 1480
PscI ACATGT 1 cut(s) 341
Psp124BI GAGCTC 1 cut(s) 712
Psp5II RGGWCCY 1 cut(s) 1480
Psp6I CCWGG 1 cut(s) 1419
PspFI CCCAGC 1 cut(s) 1336
PspGI CCWGG 1 cut(s) 1419
PspN4I GGNNCC 3 cut(s) 6, 1243, 1418
PspPI GGNCC 1 cut(s) 1480
PspPPI RGGWCCY 1 cut(s) 1480
PstI CTGCAG 1 cut(s) 811
PstNI CAGNNNCTG 1 cut(s) 1343
PvuII CAGCTG 3 cut(s) 332, 1277, 1340
RseI CAYNNNNRTG 4 cut(s) 234, 340, 986, 1503
SacI GAGCTC 1 cut(s) 712
SaqAI TTAA 5 cut(s) 234, 602, 636, 642, 1491
Sau3AI GATC 4 cut(s) 180, 529, 1018, 1081
Sau96I GGNCC 1 cut(s) 1480
SchI GAGTC 4 cut(s) 196, 1088, 1355, 1514
ScrFI CCNGG 1 cut(s) 1421
SduI GDGCHC 1 cut(s) 712
SfaNI GCATC 5 cut(s) 344, 401, 598, 661, 1507
SfcI CTRYAG 1 cut(s) 807
SfoI GGCGCC 1 cut(s) 1418
SinI GGWCC 1 cut(s) 1480
SmiMI CAYNNNNRTG 4 cut(s) 234, 340, 986, 1503
SmlI CTYRAG 2 cut(s) 1441, 1484
SmoI CTYRAG 2 cut(s) 1441, 1484
SsiI CCGC 4 cut(s) 275, 821, 837, 915
SspDI GGCGCC 1 cut(s) 1416
SspMI CTAG 5 cut(s) 18, 215, 324, 825, 1350
SstI GAGCTC 1 cut(s) 712
StyD4I CCNGG 1 cut(s) 1419
TaaI ACNGT 4 cut(s) 910, 1229, 1358, 1511
TaiI ACGT 4 cut(s) 234, 286, 1170, 1383
TaqI TCGA 2 cut(s) 316, 338
TauI GCSGC 2 cut(s) 824, 839
TfiI GAWTC 3 cut(s) 620, 1193, 1388
Tru1I TTAA 5 cut(s) 234, 602, 636, 642, 1491
Tru9I TTAA 5 cut(s) 234, 602, 636, 642, 1491
TscAI CASTG 1 cut(s) 913
TseFI GTSAC 3 cut(s) 628, 1331, 1352
Tsp45I GTSAC 3 cut(s) 628, 1331, 1352
TspDTI ATGAA 6 cut(s) 431, 633, 731, 1178, 1380, 1418
TspGWI ACGGA 1 cut(s) 1121
TspRI CASTG 1 cut(s) 913
VpaK11BI GGWCC 1 cut(s) 1480
XapI RAATTY 4 cut(s) 200, 655, 767, 1065
XceI RCATGY 2 cut(s) 345, 359
XcmI CCANNNNNNNNNTGG 1 cut(s) 355
XmnI GAANNNNTTC 1 cut(s) 438
XspI CTAG 5 cut(s) 18, 215, 324, 825, 1350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.