Protein LHY-like isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G01060 AT1G01060 AT1G01060 AT1G01060 AT1G01060 AT1G01060 AT1G01060 AT1G01060 AT2G46830 AT2G46830 AT2G46830 |
| fragaria_vesca | FvH4_7g17850 FvH4_7g17850 FvH4_7g17850 FvH4_7g17850 FvH4_7g17850 FvH4_7g17850 FvH4_7g17850 FvH4_7g17850 FvH4_7g17850 FvH4_7g17850 FvH4_7g17850 FvH4_7g17850 FvH4_7g17850 FvH4_7g17850 FvH4_7g17850 |
| malus_domestica | MD01G1090900.v1.1 |
| prunus_persica | Prupe.2G200300_v2.0.a1 Prupe.2G200300_v2.0.a1 Prupe.2G200300_v2.0.a1 Prupe.2G200300_v2.0.a1 Prupe.2G200300_v2.0.a1 Prupe.2G200300_v2.0.a1 Prupe.2G200300_v2.0.a1 Prupe.2G200400_v2.0.a1 Prupe.2G200400_v2.0.a1 |
| pyrus_communis | pycom01g11500 |
| rosa_chinensis | RchiOBHm_Chr1g0361301 |
| rosa_laevigata | RLG00000027727 |
| rosa_multiflora | Rmu_sc0002119.1_g000031 Rmu_sc0011040.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00295070 |
| rosa_rugosa | Rorug01G0287900 Rorug01G0288000 Rorug01G0288100 |
| rosa_samantha | Rh1AG299300 Rh1BG263100 Rh1CG280600 Rh1DG293100 Rh4BG414600 Rh4BG414800 |
| rosa_wichuraiana | Rw1G026480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1416 |
| AciI | CCGC | 4 cut(s) | 275, 821, 837, 915 |
| AclWI | GGATC | 1 cut(s) | 1089 |
| AcoI | YGGCCR | 2 cut(s) | 30, 127 |
| AcsI | RAATTY | 4 cut(s) | 200, 655, 767, 1065 |
| AcuI | CTGAAG | 2 cut(s) | 137, 1428 |
| AcyI | GRCGYC | 1 cut(s) | 1417 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 719, 820, 843, 886 |
| AflIII | ACRYGT | 3 cut(s) | 229, 341, 1380 |
| AgsI | TTSAA | 7 cut(s) | 110, 149, 661, 758, 774, 1131, 1197 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1171 |
| AjiI | CACGTC | 1 cut(s) | 284 |
| AjnI | CCWGG | 1 cut(s) | 1419 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 141, 173 |
| Alw21I | GWGCWC | 1 cut(s) | 712 |
| Alw26I | GTCTC | 3 cut(s) | 442, 1265, 1408 |
| AlwI | GGATC | 1 cut(s) | 1089 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1343 |
| AoxI | GGCC | 4 cut(s) | 30, 127, 845, 1422 |
| ApoI | RAATTY | 4 cut(s) | 200, 655, 767, 1065 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 438 |
| AspLEI | GCGC | 2 cut(s) | 144, 1419 |
| AspS9I | GGNCC | 1 cut(s) | 1480 |
| AsuHPI | GGTGA | 4 cut(s) | 505, 773, 1325, 1346 |
| AsuNHI | GCTAGC | 1 cut(s) | 824 |
| AvaII | GGWCC | 1 cut(s) | 1480 |
| BalI | TGGCCA | 1 cut(s) | 32 |
| BanI | GGYRCC | 1 cut(s) | 1416 |
| BanII | GRGCYC | 1 cut(s) | 712 |
| BbsI | GAAGAC | 4 cut(s) | 502, 780, 879, 1524 |
| Bbv12I | GWGCWC | 1 cut(s) | 712 |
| BccI | CCATC | 5 cut(s) | 41, 72, 989, 1012, 1261 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1259, 1293 |
| BciT130I | CCWGG | 1 cut(s) | 1421 |
| BciVI | GTATCC | 1 cut(s) | 1006 |
| BclI | TGATCA | 2 cut(s) | 529, 1018 |
| BcoDI | GTCTC | 3 cut(s) | 442, 1265, 1408 |
| BfaI | CTAG | 5 cut(s) | 18, 215, 324, 825, 1350 |
| BfmI | CTRYAG | 1 cut(s) | 807 |
| BfoI | RGCGCY | 1 cut(s) | 1420 |
| BfuI | GTATCC | 1 cut(s) | 1006 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 38 |
| Bme1390I | CCNGG | 1 cut(s) | 1421 |
| Bme18I | GGWCC | 1 cut(s) | 1480 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1171 |
| BmgBI | CACGTC | 1 cut(s) | 284 |
| BmgT120I | GGNCC | 1 cut(s) | 1480 |
| BmiI | GGNNCC | 3 cut(s) | 6, 1243, 1418 |
| BmrFI | CCNGG | 1 cut(s) | 1421 |
| BmsI | GCATC | 5 cut(s) | 344, 401, 598, 661, 1507 |
| BmtI | GCTAGC | 1 cut(s) | 828 |
| BpiI | GAAGAC | 4 cut(s) | 502, 780, 879, 1524 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 178, 210 |
| BpmI | CTGGAG | 3 cut(s) | 981, 1014, 1200 |
| BpuEI | CTTGAG | 2 cut(s) | 1426, 1469 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1017 |
| BsaHI | GRCGYC | 1 cut(s) | 1417 |
| BsaI | GGTCTC | 2 cut(s) | 442, 1408 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 354, 384 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 719, 820, 843, 886 |
| Bse1I | ACTGG | 3 cut(s) | 998, 1095, 1183 |
| Bse3DI | GCAATG | 3 cut(s) | 350, 532, 1134 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1017 |
| BseBI | CCWGG | 1 cut(s) | 1421 |
| BseGI | GGATG | 2 cut(s) | 613, 1253 |
| BseJI | GATNNNNATC | 1 cut(s) | 1017 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 719, 820, 843, 886 |
| BseMI | GCAATG | 3 cut(s) | 350, 532, 1134 |
| BseMII | CTCAG | 2 cut(s) | 209, 1335 |
| BseNI | ACTGG | 3 cut(s) | 998, 1095, 1183 |
| BseRI | GAGGAG | 3 cut(s) | 104, 1017, 1062 |
| BseYI | CCCAGC | 1 cut(s) | 1336 |
| BsgI | GTGCAG | 1 cut(s) | 197 |
| BshFI | GGCC | 4 cut(s) | 32, 129, 847, 1424 |
| BshNI | GGYRCC | 1 cut(s) | 1416 |
| BsiHKAI | GWGCWC | 1 cut(s) | 712 |
| BslFI | GGGAC | 1 cut(s) | 270 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 719, 820, 843, 886 |
| BsmAI | GTCTC | 3 cut(s) | 442, 1265, 1408 |
| BsmFI | GGGAC | 1 cut(s) | 270 |
| BsnI | GGCC | 4 cut(s) | 32, 129, 847, 1424 |
| Bso31I | GGTCTC | 2 cut(s) | 442, 1408 |
| Bsp1286I | GDGCHC | 1 cut(s) | 712 |
| Bsp143I | GATC | 4 cut(s) | 180, 529, 1018, 1081 |
| BspACI | CCGC | 4 cut(s) | 275, 821, 837, 915 |
| BspANI | GGCC | 4 cut(s) | 32, 129, 847, 1424 |
| BspCNI | CTCAG | 2 cut(s) | 208, 1336 |
| BspHI | TCATGA | 2 cut(s) | 442, 1189 |
| BspLI | GGNNCC | 3 cut(s) | 6, 1243, 1418 |
| BspMAI | CTGCAG | 1 cut(s) | 811 |
| BspOI | GCTAGC | 1 cut(s) | 828 |
| BspPI | GGATC | 1 cut(s) | 1089 |
| BspT107I | GGYRCC | 1 cut(s) | 1416 |
| BspTNI | GGTCTC | 2 cut(s) | 442, 1408 |
| BsrDI | GCAATG | 3 cut(s) | 350, 532, 1134 |
| BsrI | ACTGG | 3 cut(s) | 998, 1095, 1183 |
| BssMI | GATC | 4 cut(s) | 180, 529, 1018, 1081 |
| BssNI | GRCGYC | 1 cut(s) | 1417 |
| Bst2UI | CCWGG | 1 cut(s) | 1421 |
| Bst4CI | ACNGT | 4 cut(s) | 910, 1229, 1358, 1511 |
| Bst6I | CTCTTC | 1 cut(s) | 1404 |
| BstACI | GRCGYC | 1 cut(s) | 1417 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 476, 815, 896, 899 |
| BstC8I | GCNNGC | 2 cut(s) | 595, 826 |
| BstDEI | CTNAG | 2 cut(s) | 195, 1344 |
| BstF5I | GGATG | 2 cut(s) | 613, 1253 |
| BstH2I | RGCGCY | 1 cut(s) | 1420 |
| BstHHI | GCGC | 2 cut(s) | 144, 1419 |
| BstKTI | GATC | 4 cut(s) | 183, 532, 1021, 1084 |
| BstMAI | GTCTC | 3 cut(s) | 442, 1265, 1408 |
| BstMBI | GATC | 4 cut(s) | 180, 529, 1018, 1081 |
| BstNI | CCWGG | 1 cut(s) | 1421 |
| BstNSI | RCATGY | 2 cut(s) | 345, 359 |
| BstSCI | CCNGG | 1 cut(s) | 1419 |
| BstSFI | CTRYAG | 1 cut(s) | 807 |
| BstV2I | GAAGAC | 4 cut(s) | 502, 780, 879, 1524 |
| BsuI | GTATCC | 1 cut(s) | 1006 |
| BsuRI | GGCC | 4 cut(s) | 32, 129, 847, 1424 |
| BtgZI | GCGATG | 1 cut(s) | 91 |
| BtrI | CACGTC | 1 cut(s) | 284 |
| BtsCI | GGATG | 2 cut(s) | 613, 1253 |
| BtsIMutI | CAGTG | 1 cut(s) | 906 |
| Cac8I | GCNNGC | 2 cut(s) | 595, 826 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1343 |
| CciI | TCATGA | 2 cut(s) | 442, 1189 |
| CfoI | GCGC | 2 cut(s) | 144, 1419 |
| Cfr13I | GGNCC | 1 cut(s) | 1480 |
| CseI | GACGC | 1 cut(s) | 1161 |
| DdeI | CTNAG | 2 cut(s) | 195, 1344 |
| DinI | GGCGCC | 1 cut(s) | 1418 |
| DpnI | GATC | 4 cut(s) | 182, 531, 1020, 1083 |
| DpnII | GATC | 4 cut(s) | 180, 529, 1018, 1081 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1171 |
| EaeI | YGGCCR | 2 cut(s) | 30, 127 |
| Eam1104I | CTCTTC | 1 cut(s) | 1404 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1171 |
| EarI | CTCTTC | 1 cut(s) | 1404 |
| EciI | GGCGGA | 1 cut(s) | 264 |
| Ecl136II | GAGCTC | 1 cut(s) | 710 |
| Eco24I | GRGCYC | 1 cut(s) | 712 |
| Eco31I | GGTCTC | 2 cut(s) | 442, 1408 |
| Eco47I | GGWCC | 1 cut(s) | 1480 |
| Eco53kI | GAGCTC | 1 cut(s) | 710 |
| Eco57I | CTGAAG | 2 cut(s) | 137, 1428 |
| EcoICRI | GAGCTC | 1 cut(s) | 710 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1480 |
| EcoRII | CCWGG | 1 cut(s) | 1419 |
| EcoT38I | GRGCYC | 1 cut(s) | 712 |
| EgeI | GGCGCC | 1 cut(s) | 1418 |
| EheI | GGCGCC | 1 cut(s) | 1418 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 292, 324, 423, 455 |
| FaqI | GGGAC | 1 cut(s) | 270 |
| FauNDI | CATATG | 1 cut(s) | 1237 |
| FbaI | TGATCA | 2 cut(s) | 529, 1018 |
| FokI | GGATG | 2 cut(s) | 620, 1240 |
| FriOI | GRGCYC | 1 cut(s) | 712 |
| FspBI | CTAG | 5 cut(s) | 18, 215, 324, 825, 1350 |
| GlaI | GCGC | 2 cut(s) | 143, 1418 |
| GsaI | CCCAGC | 1 cut(s) | 1340 |
| GsuI | CTGGAG | 3 cut(s) | 981, 1014, 1200 |
| HaeII | RGCGCY | 1 cut(s) | 1420 |
| HaeIII | GGCC | 4 cut(s) | 32, 129, 847, 1424 |
| HgaI | GACGC | 1 cut(s) | 1161 |
| HhaI | GCGC | 2 cut(s) | 144, 1419 |
| Hin1I | GRCGYC | 1 cut(s) | 1417 |
| Hin6I | GCGC | 2 cut(s) | 142, 1417 |
| HinP1I | GCGC | 2 cut(s) | 142, 1417 |
| HincII | GTYRAC | 2 cut(s) | 1176, 1225 |
| HindII | GTYRAC | 2 cut(s) | 1176, 1225 |
| HinfI | GANTC | 7 cut(s) | 187, 620, 1094, 1193, 1346, 1388, 1520 |
| HphI | GGTGA | 4 cut(s) | 505, 773, 1325, 1346 |
| Hpy166II | GTNNAC | 3 cut(s) | 421, 1176, 1225 |
| Hpy188I | TCNGA | 5 cut(s) | 198, 654, 1258, 1408, 1503 |
| Hpy188III | TCNNGA | 6 cut(s) | 107, 184, 443, 1190, 1443, 1486 |
| Hpy8I | GTNNAC | 3 cut(s) | 421, 1176, 1225 |
| Hpy99I | CGWCG | 1 cut(s) | 1362 |
| HpyAV | CCTTC | 4 cut(s) | 214, 1080, 1156, 1297 |
| HpyCH4III | ACNGT | 4 cut(s) | 910, 1229, 1358, 1511 |
| HpyCH4IV | ACGT | 4 cut(s) | 231, 283, 1167, 1380 |
| HpyF3I | CTNAG | 2 cut(s) | 195, 1344 |
| HpySE526I | ACGT | 4 cut(s) | 231, 283, 1167, 1380 |
| Hsp92I | GRCGYC | 1 cut(s) | 1417 |
| HspAI | GCGC | 2 cut(s) | 142, 1417 |
| KasI | GGCGCC | 1 cut(s) | 1416 |
| Ksp22I | TGATCA | 2 cut(s) | 529, 1018 |
| Kzo9I | GATC | 4 cut(s) | 180, 529, 1018, 1081 |
| LmnI | GCTCC | 7 cut(s) | 91, 362, 525, 707, 715, 833, 1030 |
| LweI | GCATC | 5 cut(s) | 344, 401, 598, 661, 1507 |
| MaeI | CTAG | 5 cut(s) | 18, 215, 324, 825, 1350 |
| MaeII | ACGT | 4 cut(s) | 231, 283, 1167, 1380 |
| MaeIII | GTNAC | 5 cut(s) | 628, 795, 910, 1331, 1352 |
| MalI | GATC | 4 cut(s) | 182, 531, 1020, 1083 |
| MboI | GATC | 4 cut(s) | 180, 529, 1018, 1081 |
| MfeI | CAATTG | 3 cut(s) | 258, 496, 894 |
| MhlI | GDGCHC | 1 cut(s) | 712 |
| MlsI | TGGCCA | 1 cut(s) | 32 |
| MluNI | TGGCCA | 1 cut(s) | 32 |
| Mly113I | GGCGCC | 1 cut(s) | 1417 |
| MlyI | GAGTC | 4 cut(s) | 196, 1088, 1355, 1514 |
| MmeI | TCCRAC | 3 cut(s) | 352, 1269, 1281 |
| Mox20I | TGGCCA | 1 cut(s) | 32 |
| MroXI | GAANNNNTTC | 1 cut(s) | 438 |
| MscI | TGGCCA | 1 cut(s) | 32 |
| MseI | TTAA | 5 cut(s) | 234, 602, 636, 642, 1491 |
| MslI | CAYNNNNRTG | 4 cut(s) | 234, 340, 986, 1503 |
| Msp20I | TGGCCA | 1 cut(s) | 32 |
| MspA1I | CMGCKG | 4 cut(s) | 332, 917, 1277, 1340 |
| MspR9I | CCNGG | 1 cut(s) | 1421 |
| MunI | CAATTG | 3 cut(s) | 258, 496, 894 |
| MvaI | CCWGG | 1 cut(s) | 1421 |
| NarI | GGCGCC | 1 cut(s) | 1417 |
| NdeI | CATATG | 1 cut(s) | 1237 |
| NdeII | GATC | 4 cut(s) | 180, 529, 1018, 1081 |
| NheI | GCTAGC | 1 cut(s) | 824 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 1243, 1418 |
| NmeAIII | GCCGAG | 1 cut(s) | 155 |
| NmuCI | GTSAC | 3 cut(s) | 628, 1331, 1352 |
| NspI | RCATGY | 2 cut(s) | 345, 359 |
| PagI | TCATGA | 2 cut(s) | 442, 1189 |
| PciI | ACATGT | 1 cut(s) | 341 |
| PdmI | GAANNNNTTC | 1 cut(s) | 438 |
| PfeI | GAWTC | 3 cut(s) | 620, 1193, 1388 |
| PleI | GAGTC | 4 cut(s) | 195, 1088, 1354, 1514 |
| PluTI | GGCGCC | 1 cut(s) | 1420 |
| PpsI | GAGTC | 4 cut(s) | 195, 1088, 1354, 1514 |
| PpuMI | RGGWCCY | 1 cut(s) | 1480 |
| PscI | ACATGT | 1 cut(s) | 341 |
| Psp124BI | GAGCTC | 1 cut(s) | 712 |
| Psp5II | RGGWCCY | 1 cut(s) | 1480 |
| Psp6I | CCWGG | 1 cut(s) | 1419 |
| PspFI | CCCAGC | 1 cut(s) | 1336 |
| PspGI | CCWGG | 1 cut(s) | 1419 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 1243, 1418 |
| PspPI | GGNCC | 1 cut(s) | 1480 |
| PspPPI | RGGWCCY | 1 cut(s) | 1480 |
| PstI | CTGCAG | 1 cut(s) | 811 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1343 |
| PvuII | CAGCTG | 3 cut(s) | 332, 1277, 1340 |
| RseI | CAYNNNNRTG | 4 cut(s) | 234, 340, 986, 1503 |
| SacI | GAGCTC | 1 cut(s) | 712 |
| SaqAI | TTAA | 5 cut(s) | 234, 602, 636, 642, 1491 |
| Sau3AI | GATC | 4 cut(s) | 180, 529, 1018, 1081 |
| Sau96I | GGNCC | 1 cut(s) | 1480 |
| SchI | GAGTC | 4 cut(s) | 196, 1088, 1355, 1514 |
| ScrFI | CCNGG | 1 cut(s) | 1421 |
| SduI | GDGCHC | 1 cut(s) | 712 |
| SfaNI | GCATC | 5 cut(s) | 344, 401, 598, 661, 1507 |
| SfcI | CTRYAG | 1 cut(s) | 807 |
| SfoI | GGCGCC | 1 cut(s) | 1418 |
| SinI | GGWCC | 1 cut(s) | 1480 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 234, 340, 986, 1503 |
| SmlI | CTYRAG | 2 cut(s) | 1441, 1484 |
| SmoI | CTYRAG | 2 cut(s) | 1441, 1484 |
| SsiI | CCGC | 4 cut(s) | 275, 821, 837, 915 |
| SspDI | GGCGCC | 1 cut(s) | 1416 |
| SspMI | CTAG | 5 cut(s) | 18, 215, 324, 825, 1350 |
| SstI | GAGCTC | 1 cut(s) | 712 |
| StyD4I | CCNGG | 1 cut(s) | 1419 |
| TaaI | ACNGT | 4 cut(s) | 910, 1229, 1358, 1511 |
| TaiI | ACGT | 4 cut(s) | 234, 286, 1170, 1383 |
| TaqI | TCGA | 2 cut(s) | 316, 338 |
| TauI | GCSGC | 2 cut(s) | 824, 839 |
| TfiI | GAWTC | 3 cut(s) | 620, 1193, 1388 |
| Tru1I | TTAA | 5 cut(s) | 234, 602, 636, 642, 1491 |
| Tru9I | TTAA | 5 cut(s) | 234, 602, 636, 642, 1491 |
| TscAI | CASTG | 1 cut(s) | 913 |
| TseFI | GTSAC | 3 cut(s) | 628, 1331, 1352 |
| Tsp45I | GTSAC | 3 cut(s) | 628, 1331, 1352 |
| TspDTI | ATGAA | 6 cut(s) | 431, 633, 731, 1178, 1380, 1418 |
| TspGWI | ACGGA | 1 cut(s) | 1121 |
| TspRI | CASTG | 1 cut(s) | 913 |
| VpaK11BI | GGWCC | 1 cut(s) | 1480 |
| XapI | RAATTY | 4 cut(s) | 200, 655, 767, 1065 |
| XceI | RCATGY | 2 cut(s) | 345, 359 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 355 |
| XmnI | GAANNNNTTC | 1 cut(s) | 438 |
| XspI | CTAG | 5 cut(s) | 18, 215, 324, 825, 1350 |