Rorug01G0287900
MYB Family

Protein LHY-like isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0001426
Physical Location & Seq
Reverse (-)
40253201 .. 40256299
3099 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0287900.1

Sequence Viewer

Length: 2694 bp
ATGTCTTCTTCCATGGTTCCCATCTCTCTTCTCCTCCCCATACTCCAAACCCTAATCCTCATCTCCACAAACTCCAATCCCATTCCCAAAACTACTTCACCCCAAAACCCAACCCAGTTCTCCAACACCCTTCCATGTCCCACTCCAAACTCAAACGGGTCTTCAAGAACTGTCTCGAAGATTCTTTGGTACGAACCCTTGAGAACCAACAAGGTTATACTCTATGGCAACTCCACCATTTGCAGTCGCAACAGGACCTTTCAGCTCGGCTTCTTCTCCTCTAATGGCGGCGCCTACTTGGCAATAATGTACTCCTCAATTCAGGTCCCCACCGTAGTCTGGGTCGCCAACCGCGACCGCCCCGTCAAGAATCTCACTTCAGCCAGACTCGAAATCACAGCCACCGACGGCCGGCTCGTCGTTATAGACTCCGATAACTCGACTCTCTGGGCCAGCCAGAACGCCGCCGCCGCCGTCGGCGCCCAAGTCGTGCTGTTGGAGAGCGGCAATCTGGTGTTGCTCACCCACTCCGGGGAACTCGCGTGGCAGAGCTTCGATCACCCGGCTGACACGTGGCTCCCCGGAATGAATCTGACGGCGGGGCGTGGCCTGACCAGCTGGCGGAGCGCGGAGGACCCGTCCCCGGGTTTGTATTCGCTGCGGCTGCGCCCACAGGATTACGGTGAGTTTGAGCTAGTTTTTAACGGTAGTGTTGAGTATTGGAGGACCGGGGTTTGGGACGGTAAGGCTTTCGCTGATGTGCCGGAGATGACTGTTAAGTATATCTATATGTTTCACTTCATAGACCCGTTCAAGCCGACGGCGTCGTTTGGGTTCACCGAGCGGCCGTTGGAGAGAGGGTTGGACCCGCCGCTGACCCGGTTCCAGATAGACCATTCGGGTCAGCTCCGGCAGTATACTTGGGGTTCAAGCGAGACCTGGGACAAGTTTTGGTACCAGCCTGAGGACAAGTGCAGAGTGTTTGGTTTGTGTGGGAGGTTTGGGGTTTGTGATGCTGAGACTGCCGAACCCTGTGAGTGTCCCTCAGGGTTTAAGCCTGTGGATGAGTCTGGTTGGGACTCTGGGGACTATTCCGGTGGGTGTGAGAGGTTTGGTGATGTGTCTTGTGAAGAAAGAGATGATGGTTTCGTGGAGGTTCGGGTTGAGAGTTTTGCGGAAAGTTGGCATAATAGTTCGATTACTGGTAGGGATGGTTGTGAAAAGATGTGCTTGCAAGTTTGTTCTTGTATTGGTTTTCAGTACAACGAGAGGTCTGGTTTGTGTAGACATTATTTCGGGTCTCTGTCGAATTTGAGGAATGTGAGCTCTGATGGTAATAGCAGTATGGATGCTGGTAGTGTTTTGAATTTGAAGGTACGAAAAGGTGTGATCTTGAAGAACAGGAAGGCTAAGGTTATGAATTATACAGTTTTTGGTGCTAGCATTGTTGGGTCAGTTGCGGTTTTGGGTTTTGTGGTGGTGGCTGTATTGATTAGGAGAAGAAGGATGAAGAGGAATGGAGGAGCAGAGAAAAGTGGTTTGCTGCCGGTGTTGAATTTGAAGGTATTTTCCTACAAAGAGCTTCAGACTGCAACCTGGGGTTTTAAACAGAAACTCGGGCATGGTGGCTTTGGAGCGGTTTTCCTAGGTGAGCTATCAGACCGTACTCTTGTTGCAGTGAAACGCTTGGAGAGGCCAGGCAGCGGAGAGCAACAATTCCGAGCAGAAGTTTGCACCATTGGCAACATTCAGCATGTCAATCTTGTGAGACTTAGAGGCTTCTGCTCAGAAGATTCTCATAGACTTCTGGTATATGATTACATGCCAAATGGTCCTCTAAGTGTGTATCTACGTCGAGACGGTCCAAATTTGAGCTGGGATGTTAGGTTTCGGCTAGCGGTTGGTACGGCAAGAGGCATTGCATATTTACATGAGGGGTGTAGAGATTCCATAATCCATTGTGATATCAAACCAGAAAACATTTTGCTTGATAGTGATTACACGGCAAAGGTGTCAGATTTTGGGTTAGCAAAGCTAATTCACAGAGACTTTAGTGGAGCATTAGCTGCTGATGGTAATCATGGCTATACCTATGGCTATGTAGCGCCAGAGTGCAGACCTGGTGATCCAATCACCACAAAAGCCGATGTTTACAGCTATGGAAAGACATTGATAGAATTACTTGGAGGCCATAGAATGTGGGAGGCACCTCCATCTGTGAGAGAGGGTGGAAATGAAATAACAGATTCTTGGTGCTTTCCTTCGTGGGCGGCACAGCAGATAATTGATGGCAATGTGGTGGCTGTAATTGATGATAGACTCGGGAGCAAGTATAACCTTAAGGAGGCAGAGCGTGTTGCATTAGTGGCGGTGTGGTGCATACAGGACGACGAGGCAACAAGGCCTACAATGGGGATGGTAGTGACAATGTTGGAAGGGGTTGTGGAAGTGACTGTTCCTCCAGCACCAAAGTTGTTACAAGCGCTGGTTTCAGGGGAGTCATTCTGTGGGGTGAATTCCGATTCTGGACACAGTCCATCGATTGCCAGCGACAACTTCTCTGGTTGTAATACGAAATTATCTAGTTGCGGTTCAGAGTCGTCACTTGGTAATGTCTCTTCCTTAGTAAATGAGAATGTGCATGAAAACCGAAGAAGTTCAGTGAGCTTTACTGTCAATACTGACCATAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001067 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0007275 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009648 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0010033 GO:0010035 GO:0010038 GO:0010228 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042493 GO:0042752 GO:0042754 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043393 GO:0043433 GO:0043496 GO:0043565 GO:0044092 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046677 GO:0046686 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048571 GO:0048573 GO:0048574 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051090 GO:0051098 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0060255 GO:0061458 GO:0065007 GO:0065009 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

897

Amino Acids

98.68

Weight (kDa)

6.07

Isoelectric Point (pI)

39.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 111 - 200 2.7e-26 D-mannose binding lectin
S_locus_glycop PF00954 241 - 353 2.2e-22 S-locus glycoprotein domain
Pkinase PF00069 535 - 808 1.2e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 535 - 809 1.2e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 362
Acc65I GGTACC 1 cut(s) 954
AccB1I GGYRCC 4 cut(s) 290, 479, 954, 2206
AccBSI CCGCTC 3 cut(s) 504, 844, 1637
AccI GTMKAC 2 cut(s) 917, 1285
AccII CGCG 3 cut(s) 354, 542, 629
AclWI GGATC 1 cut(s) 2120
AcoI YGGCCR 2 cut(s) 409, 845
AcsI RAATTY 5 cut(s) 1309, 1366, 1555, 1867, 2515
AcuI CTGAAG 2 cut(s) 363, 1568
AcvI CACGTG 1 cut(s) 573
AcyI GRCGYC 3 cut(s) 291, 480, 824
AfaI GTAC 7 cut(s) 191, 311, 956, 1262, 1377, 1666, 1906
AfeI AGCGCT 1 cut(s) 2484
AflII CTTAAG 1 cut(s) 2339
AflIII ACRYGT 1 cut(s) 570
AgsI TTSAA 8 cut(s) 165, 814, 930, 1366, 1372, 1396, 1555, 1561
AjnI CCWGG 4 cut(s) 938, 1595, 1696, 2119
Alw21I GWGCWC 1 cut(s) 1328
Alw26I GTCTC 8 cut(s) 178, 929, 1013, 1305, 1762, 1851, 2040, 2620
AlwI GGATC 1 cut(s) 2120
Ama87I CYCGRG 3 cut(s) 643, 1616, 2321
Aor51HI AGCGCT 1 cut(s) 2484
AoxI GGCC 7 cut(s) 409, 450, 607, 845, 1694, 2188, 2402
ApeKI GCWGC 5 cut(s) 658, 664, 1543, 1701, 2066
ApoI RAATTY 5 cut(s) 1309, 1366, 1555, 1867, 2515
Asp700I GAANNNNTTC 1 cut(s) 2656
Asp718I GGTACC 1 cut(s) 954
AspA2I CCTAGG 1 cut(s) 1645
AspLEI GCGC 6 cut(s) 293, 482, 629, 669, 2107, 2485
AspS9I GGNCC 8 cut(s) 255, 325, 450, 634, 726, 865, 1832, 1862
AsuC2I CCSGG 7 cut(s) 532, 563, 582, 644, 645, 730, 880
AsuNHI GCTAGC 2 cut(s) 1439, 1894
AvaI CYCGRG 3 cut(s) 643, 1616, 2321
AvaII GGWCC 7 cut(s) 255, 325, 634, 726, 865, 1832, 1862
AvrII CCTAGG 1 cut(s) 1645
AxyI CCTNAGG 2 cut(s) 963, 1045
BanI GGYRCC 4 cut(s) 290, 479, 954, 2206
BanII GRGCYC 1 cut(s) 1328
BarI GAAGNNNNNNTAC 2 cut(s) 2602, 2634
BbrPI CACGTG 1 cut(s) 573
BbsI GAAGAC 1 cut(s) 153
Bbv12I GWGCWC 1 cut(s) 1328
BbvI GCAGC 5 cut(s) 645, 651, 1530, 1713, 2053
BccI CCATC 9 cut(s) 29, 1136, 1205, 1325, 2066, 2221, 2282, 2410, 2545
BceAI ACGGC 7 cut(s) 424, 458, 612, 832, 837, 1923, 2019
BciT130I CCWGG 4 cut(s) 940, 1597, 1698, 2121
BcnI CCSGG 7 cut(s) 532, 563, 582, 644, 645, 730, 880
BcoDI GTCTC 8 cut(s) 178, 929, 1013, 1305, 1762, 1851, 2040, 2620
BfaI CTAG 5 cut(s) 695, 1440, 1646, 1895, 2583
BfoI RGCGCY 4 cut(s) 294, 483, 2108, 2486
BfrI CTTAAG 1 cut(s) 2339
BglI GCCNNNNNGGC 1 cut(s) 299
BlnI CCTAGG 1 cut(s) 1645
Bme18I GGWCC 7 cut(s) 255, 325, 634, 726, 865, 1832, 1862
BmeT110I CYCGRG 3 cut(s) 643, 1616, 2321
BmgT120I GGNCC 8 cut(s) 255, 325, 450, 634, 726, 865, 1832, 1862
BmrI ACTGGG 1 cut(s) 109
BmsI GCATC 2 cut(s) 1003, 1339
BmtI GCTAGC 2 cut(s) 1443, 1898
BmuI ACTGGG 1 cut(s) 109
BpiI GAAGAC 1 cut(s) 153
BplI GAGNNNNNCTC 2 cut(s) 1028, 1060
BpmI CTGGAG 1 cut(s) 2445
Bpu10I CCTNAGC 1 cut(s) 1410
BpuEI CTTGAG 1 cut(s) 220
BpuMI CCSGG 7 cut(s) 532, 563, 582, 644, 645, 730, 880
Bsa29I ATCGAT 1 cut(s) 2540
BsaAI YACGTR 1 cut(s) 573
BsaBI GATNNNNATC 1 cut(s) 2076
BsaHI GRCGYC 3 cut(s) 291, 480, 824
BsaI GGTCTC 2 cut(s) 929, 1305
BsaJI CCNNGG 9 cut(s) 12, 531, 580, 642, 643, 729, 939, 1596, 1645
BsaWI WCCGGW 1 cut(s) 1094
BsaXI ACNNNNNCTCC 6 cut(s) 623, 653, 845, 875, 2443, 2473
Bse118I RCCGGY 2 cut(s) 411, 1546
Bse1I ACTGG 2 cut(s) 115, 1207
Bse21I CCTNAGG 2 cut(s) 963, 1045
Bse3DI GCAATG 2 cut(s) 1917, 2299
Bse8I GATNNNNATC 1 cut(s) 2076
BseBI CCWGG 4 cut(s) 940, 1597, 1698, 2121
BseCI ATCGAT 1 cut(s) 2540
BseDI CCNNGG 9 cut(s) 12, 531, 580, 642, 643, 729, 939, 1596, 1645
BseGI GGATG 6 cut(s) 1069, 1216, 1354, 1512, 1885, 2421
BseJI GATNNNNATC 1 cut(s) 2076
BseMI GCAATG 2 cut(s) 1917, 2299
BseMII CTCAG 4 cut(s) 954, 1008, 1059, 1800
BseNI ACTGG 2 cut(s) 115, 1207
BseRI GAGGAG 4 cut(s) 23, 268, 304, 1536
BseX3I CGGCCG 2 cut(s) 409, 845
BseXI GCAGC 5 cut(s) 645, 651, 1530, 1713, 2053
BseYI CCCAGC 1 cut(s) 1875
BsgI GTGCAG 2 cut(s) 994, 2134
Bsh1236I CGCG 3 cut(s) 354, 542, 629
Bsh1285I CGRYCG 3 cut(s) 358, 412, 848
BshFI GGCC 7 cut(s) 411, 452, 609, 847, 1696, 2190, 2404
BshNI GGYRCC 4 cut(s) 290, 479, 954, 2206
BshVI ATCGAT 1 cut(s) 2540
BsiEI CGRYCG 3 cut(s) 358, 412, 848
BsiHKAI GWGCWC 1 cut(s) 1328
BsiHKCI CYCGRG 3 cut(s) 643, 1616, 2321
BslFI GGGAC 8 cut(s) 123, 311, 625, 752, 956, 1026, 1091, 1100
BsmAI GTCTC 8 cut(s) 178, 929, 1013, 1305, 1762, 1851, 2040, 2620
BsmBI CGTCTC 1 cut(s) 1851
BsmFI GGGAC 8 cut(s) 123, 311, 625, 752, 956, 1026, 1091, 1100
BsnI GGCC 7 cut(s) 411, 452, 609, 847, 1696, 2190, 2404
Bso31I GGTCTC 2 cut(s) 929, 1305
BsoBI CYCGRG 3 cut(s) 643, 1616, 2321
Bsp1286I GDGCHC 1 cut(s) 1328
Bsp143I GATC 3 cut(s) 556, 1389, 2125
Bsp19I CCATGG 1 cut(s) 12
BspANI GGCC 7 cut(s) 411, 452, 609, 847, 1696, 2190, 2404
BspCNI CTCAG 4 cut(s) 955, 1009, 1058, 1799
BspDI ATCGAT 1 cut(s) 2540
BspFNI CGCG 3 cut(s) 354, 542, 629
BspOI GCTAGC 2 cut(s) 1443, 1898
BspPI GGATC 1 cut(s) 2120
BspT107I GGYRCC 4 cut(s) 290, 479, 954, 2206
BspTI CTTAAG 1 cut(s) 2339
BspTNI GGTCTC 2 cut(s) 929, 1305
BsrBI CCGCTC 3 cut(s) 504, 844, 1637
BsrDI GCAATG 2 cut(s) 1917, 2299
BsrFI RCCGGY 2 cut(s) 411, 1546
BsrI ACTGG 2 cut(s) 115, 1207
BssAI RCCGGY 2 cut(s) 411, 1546
BssECI CCNNGG 9 cut(s) 12, 531, 580, 642, 643, 729, 939, 1596, 1645
BssMI GATC 3 cut(s) 556, 1389, 2125
BssNAI GTATAC 1 cut(s) 918
BssNI GRCGYC 3 cut(s) 291, 480, 824
BssT1I CCWWGG 2 cut(s) 12, 1645
Bst1107I GTATAC 1 cut(s) 918
Bst2UI CCWGG 4 cut(s) 940, 1597, 1698, 2121
Bst6I CTCTTC 3 cut(s) 33, 1505, 2623
BstACI GRCGYC 3 cut(s) 291, 480, 824
BstAFI CTTAAG 1 cut(s) 2339
BstAPI GCANNNNNTGC 1 cut(s) 2066
BstBAI YACGTR 1 cut(s) 573
BstC8I GCNNGC 7 cut(s) 413, 454, 620, 1232, 1441, 1896, 2548
BstDEI CTNAG 8 cut(s) 963, 1017, 1045, 1410, 1772, 1786, 1838, 2623
BstDSI CCRYGG 1 cut(s) 12
BstENI CCTNNNNNAGG 1 cut(s) 2342
BstF5I GGATG 6 cut(s) 1069, 1216, 1354, 1512, 1885, 2421
BstFNI CGCG 3 cut(s) 354, 542, 629
BstH2I RGCGCY 4 cut(s) 294, 483, 2108, 2486
BstHHI GCGC 6 cut(s) 293, 482, 629, 669, 2107, 2485
BstKTI GATC 3 cut(s) 559, 1392, 2128
BstMAI GTCTC 8 cut(s) 178, 929, 1013, 1305, 1762, 1851, 2040, 2620
BstMBI GATC 3 cut(s) 556, 1389, 2125
BstMCI CGRYCG 3 cut(s) 358, 412, 848
BstNI CCWGG 4 cut(s) 940, 1597, 1698, 2121
BstNSI RCATGY 2 cut(s) 1757, 1825
BstUI CGCG 3 cut(s) 354, 542, 629
BstV1I GCAGC 5 cut(s) 645, 651, 1530, 1713, 2053
BstV2I GAAGAC 1 cut(s) 153
BstZ17I GTATAC 1 cut(s) 918
BstZI CGGCCG 2 cut(s) 409, 845
Bsu15I ATCGAT 1 cut(s) 2540
Bsu36I CCTNAGG 2 cut(s) 963, 1045
BsuRI GGCC 7 cut(s) 411, 452, 609, 847, 1696, 2190, 2404
BsuTUI ATCGAT 1 cut(s) 2540
BtgI CCRYGG 1 cut(s) 12
BtsCI GGATG 6 cut(s) 1069, 1216, 1354, 1512, 1885, 2421
BtsI GCAGTG 1 cut(s) 1683
BtsIMutI CAGTG 2 cut(s) 1683, 2667
Cac8I GCNNGC 7 cut(s) 413, 454, 620, 1232, 1441, 1896, 2548
CfoI GCGC 6 cut(s) 293, 482, 629, 669, 2107, 2485
Cfr10I RCCGGY 2 cut(s) 411, 1546
Cfr13I GGNCC 8 cut(s) 255, 325, 450, 634, 726, 865, 1832, 1862
Cfr9I CCCGGG 1 cut(s) 643
ClaI ATCGAT 1 cut(s) 2540
CseI GACGC 1 cut(s) 813
CsiI ACCWGGT 1 cut(s) 2119
Csp6I GTAC 7 cut(s) 190, 310, 955, 1261, 1376, 1665, 1905
CviAII CATG 8 cut(s) 13, 135, 1622, 1754, 1822, 1931, 2081, 2642
CviQI GTAC 7 cut(s) 190, 310, 955, 1261, 1376, 1665, 1905
DdeI CTNAG 8 cut(s) 963, 1017, 1045, 1410, 1772, 1786, 1838, 2623
DinI GGCGCC 2 cut(s) 292, 481
DpnI GATC 3 cut(s) 558, 1391, 2127
DpnII GATC 3 cut(s) 556, 1389, 2125
DraI TTTAAA 1 cut(s) 1606
DrdI GACNNNNNNGTC 1 cut(s) 362
DseDI GACNNNNNNGTC 1 cut(s) 362
EaeI YGGCCR 2 cut(s) 409, 845
EagI CGGCCG 2 cut(s) 409, 845
Eam1104I CTCTTC 3 cut(s) 33, 1505, 2623
EarI CTCTTC 3 cut(s) 33, 1505, 2623
EciI GGCGGA 1 cut(s) 637
Ecl136II GAGCTC 1 cut(s) 1326
EclXI CGGCCG 2 cut(s) 409, 845
Eco130I CCWWGG 2 cut(s) 12, 1645
Eco147I AGGCCT 1 cut(s) 2404
Eco24I GRGCYC 1 cut(s) 1328
Eco31I GGTCTC 2 cut(s) 929, 1305
Eco32I GATATC 1 cut(s) 1966
Eco47I GGWCC 7 cut(s) 255, 325, 634, 726, 865, 1832, 1862
Eco47III AGCGCT 1 cut(s) 2484
Eco52I CGGCCG 2 cut(s) 409, 845
Eco53kI GAGCTC 1 cut(s) 1326
Eco57I CTGAAG 2 cut(s) 363, 1568
Eco72I CACGTG 1 cut(s) 573
Eco81I CCTNAGG 2 cut(s) 963, 1045
Eco88I CYCGRG 3 cut(s) 643, 1616, 2321
EcoICRI GAGCTC 1 cut(s) 1326
EcoNI CCTNNNNNAGG 1 cut(s) 2342
EcoO109I RGGNCCY 3 cut(s) 255, 325, 634
EcoRI GAATTC 1 cut(s) 2515
EcoRII CCWGG 4 cut(s) 938, 1595, 1696, 2119
EcoRV GATATC 1 cut(s) 1966
EcoT14I CCWWGG 2 cut(s) 12, 1645
EcoT38I GRGCYC 1 cut(s) 1328
EgeI GGCGCC 2 cut(s) 292, 481
EheI GGCGCC 2 cut(s) 292, 481
ErhI CCWWGG 2 cut(s) 12, 1645
Esp3I CGTCTC 1 cut(s) 1851
FaeI CATG 8 cut(s) 16, 138, 1625, 1757, 1825, 1934, 2084, 2645
FalI AAGNNNNNCTT 2 cut(s) 1214, 1246
FaqI GGGAC 8 cut(s) 123, 311, 625, 752, 956, 1026, 1091, 1100
FatI CATG 8 cut(s) 12, 134, 1621, 1753, 1821, 1930, 2080, 2641
FauI CCCGC 2 cut(s) 592, 876
FblI GTMKAC 2 cut(s) 917, 1285
FokI GGATG 6 cut(s) 1076, 1223, 1361, 1519, 1892, 2428
FriOI GRGCYC 1 cut(s) 1328
FspBI CTAG 5 cut(s) 695, 1440, 1646, 1895, 2583
GlaI GCGC 6 cut(s) 292, 481, 628, 668, 2106, 2484
GsaI CCCAGC 1 cut(s) 1879
GsuI CTGGAG 1 cut(s) 2445
HaeII RGCGCY 4 cut(s) 294, 483, 2108, 2486
HaeIII GGCC 7 cut(s) 411, 452, 609, 847, 1696, 2190, 2404
HgaI GACGC 1 cut(s) 813
HhaI GCGC 6 cut(s) 293, 482, 629, 669, 2107, 2485
Hin1I GRCGYC 3 cut(s) 291, 480, 824
Hin1II CATG 8 cut(s) 16, 138, 1625, 1757, 1825, 1934, 2084, 2645
Hin6I GCGC 6 cut(s) 291, 480, 627, 667, 2105, 2483
HinP1I GCGC 6 cut(s) 291, 480, 627, 667, 2105, 2483
Hpy166II GTNNAC 4 cut(s) 837, 918, 1286, 2152
Hpy188III TCNNGA 8 cut(s) 165, 175, 367, 886, 1393, 1856, 2323, 2526
Hpy8I GTNNAC 4 cut(s) 837, 918, 1286, 2152
Hpy99I CGWCG 7 cut(s) 410, 422, 479, 823, 829, 1857, 2393
HpyAV CCTTC 7 cut(s) 140, 1366, 1399, 1497, 1555, 2271, 2429
HpyCH4IV ACGT 2 cut(s) 572, 1852
HpyF3I CTNAG 8 cut(s) 963, 1017, 1045, 1410, 1772, 1786, 1838, 2623
HpySE526I ACGT 2 cut(s) 572, 1852
Hsp92I GRCGYC 3 cut(s) 291, 480, 824
Hsp92II CATG 8 cut(s) 16, 138, 1625, 1757, 1825, 1934, 2084, 2645
HspAI GCGC 6 cut(s) 291, 480, 627, 667, 2105, 2483
KasI GGCGCC 2 cut(s) 290, 479
KpnI GGTACC 1 cut(s) 958
KroI GCCGGC 1 cut(s) 411
KroNI GCCGGC 1 cut(s) 413
Kzo9I GATC 3 cut(s) 556, 1389, 2125
LmnI GCTCC 7 cut(s) 582, 624, 912, 1523, 1634, 2057, 2325
Lsp1109I GCAGC 5 cut(s) 645, 651, 1530, 1713, 2053
LweI GCATC 2 cut(s) 1003, 1339
MabI ACCWGGT 1 cut(s) 2119
MaeI CTAG 5 cut(s) 695, 1440, 1646, 1895, 2583
MaeII ACGT 2 cut(s) 572, 1852
MaeIII GTNAC 4 cut(s) 2422, 2449, 2475, 2601
MalI GATC 3 cut(s) 558, 1391, 2127
MbiI CCGCTC 3 cut(s) 504, 844, 1637
MboI GATC 3 cut(s) 556, 1389, 2125
MhlI GDGCHC 1 cut(s) 1328
Mly113I GGCGCC 2 cut(s) 291, 480
MlyI GAGTC 8 cut(s) 381, 422, 436, 1073, 1076, 2313, 2507, 2606
MmeI TCCRAC 5 cut(s) 147, 477, 831, 843, 2412
MroNI GCCGGC 1 cut(s) 411
MroXI GAANNNNTTC 1 cut(s) 2656
MseI TTAA 5 cut(s) 702, 777, 1053, 1605, 2340
MspA1I CMGCKG 3 cut(s) 618, 874, 1704
MspCI CTTAAG 1 cut(s) 2339
MvaI CCWGG 4 cut(s) 940, 1597, 1698, 2121
MvnI CGCG 3 cut(s) 354, 542, 629
NaeI GCCGGC 1 cut(s) 413
NarI GGCGCC 2 cut(s) 291, 480
NciI CCSGG 7 cut(s) 532, 563, 582, 644, 645, 730, 880
NcoI CCATGG 1 cut(s) 12
NdeII GATC 3 cut(s) 556, 1389, 2125
NgoMIV GCCGGC 1 cut(s) 411
NheI GCTAGC 2 cut(s) 1439, 1894
NlaIII CATG 8 cut(s) 16, 138, 1625, 1757, 1825, 1934, 2084, 2645
NmeAIII GCCGAG 1 cut(s) 246
NmuCI GTSAC 3 cut(s) 2422, 2449, 2601
NspI RCATGY 2 cut(s) 1757, 1825
PceI AGGCCT 1 cut(s) 2404
PcsI WCGNNNNNNNCGW 2 cut(s) 351, 414
PdiI GCCGGC 1 cut(s) 413
PdmI GAANNNNTTC 1 cut(s) 2656
PfeI GAWTC 7 cut(s) 181, 370, 589, 1793, 1946, 2246, 2522
PflFI GACNNNGTC 2 cut(s) 823, 2532
PleI GAGTC 8 cut(s) 381, 422, 436, 1073, 1075, 2313, 2506, 2605
PluTI GGCGCC 2 cut(s) 294, 483
PmaCI CACGTG 1 cut(s) 573
PmlI CACGTG 1 cut(s) 573
PpsI GAGTC 8 cut(s) 381, 422, 436, 1073, 1075, 2313, 2506, 2605
Ppu21I YACGTR 1 cut(s) 573
PpuMI RGGWCCY 3 cut(s) 255, 325, 634
Psp124BI GAGCTC 1 cut(s) 1328
Psp5II RGGWCCY 3 cut(s) 255, 325, 634
Psp6I CCWGG 4 cut(s) 938, 1595, 1696, 2119
PspCI CACGTG 1 cut(s) 573
PspFI CCCAGC 1 cut(s) 1875
PspGI CCWGG 4 cut(s) 938, 1595, 1696, 2119
PspPI GGNCC 8 cut(s) 255, 325, 450, 634, 726, 865, 1832, 1862
PspPPI RGGWCCY 3 cut(s) 255, 325, 634
PsyI GACNNNGTC 2 cut(s) 823, 2532
PvuII CAGCTG 1 cut(s) 618
RsaI GTAC 7 cut(s) 191, 311, 956, 1262, 1377, 1666, 1906
RsaNI GTAC 7 cut(s) 190, 310, 955, 1261, 1376, 1665, 1905
SacI GAGCTC 1 cut(s) 1328
SaqAI TTAA 5 cut(s) 702, 777, 1053, 1605, 2340
Sau3AI GATC 3 cut(s) 556, 1389, 2125
Sau96I GGNCC 8 cut(s) 255, 325, 450, 634, 726, 865, 1832, 1862
SchI GAGTC 8 cut(s) 381, 422, 436, 1073, 1076, 2313, 2507, 2606
SduI GDGCHC 1 cut(s) 1328
SexAI ACCWGGT 1 cut(s) 2119
SfaNI GCATC 2 cut(s) 1003, 1339
SfoI GGCGCC 2 cut(s) 292, 481
SinI GGWCC 7 cut(s) 255, 325, 634, 726, 865, 1832, 1862
SmaI CCCGGG 1 cut(s) 645
SmlI CTYRAG 2 cut(s) 199, 2339
SmoI CTYRAG 2 cut(s) 199, 2339
SseBI AGGCCT 1 cut(s) 2404
SspDI GGCGCC 2 cut(s) 290, 479
SspMI CTAG 5 cut(s) 695, 1440, 1646, 1895, 2583
SstI GAGCTC 1 cut(s) 1328
StuI AGGCCT 1 cut(s) 2404
StyI CCWWGG 2 cut(s) 12, 1645
TaiI ACGT 2 cut(s) 575, 1855
TaqI TCGA 8 cut(s) 176, 390, 440, 555, 1196, 1307, 1855, 2540
TatI WGTACW 2 cut(s) 309, 1260
TauI GCSGC 9 cut(s) 291, 467, 470, 473, 507, 664, 847, 874, 2273
TfiI GAWTC 7 cut(s) 181, 370, 589, 1793, 1946, 2246, 2522
Tru1I TTAA 5 cut(s) 702, 777, 1053, 1605, 2340
Tru9I TTAA 5 cut(s) 702, 777, 1053, 1605, 2340
TscAI CASTG 2 cut(s) 1683, 2667
TseFI GTSAC 3 cut(s) 2422, 2449, 2601
TseI GCWGC 5 cut(s) 658, 664, 1543, 1701, 2066
Tsp45I GTSAC 3 cut(s) 2422, 2449, 2601
TspDTI ATGAA 6 cut(s) 602, 790, 1433, 1523, 2250, 2658
TspMI CCCGGG 1 cut(s) 643
TspRI CASTG 2 cut(s) 1683, 2667
Tth111I GACNNNGTC 2 cut(s) 823, 2532
Vha464I CTTAAG 1 cut(s) 2339
VpaK11BI GGWCC 7 cut(s) 255, 325, 634, 726, 865, 1832, 1862
XagI CCTNNNNNAGG 1 cut(s) 2342
XapI RAATTY 5 cut(s) 1309, 1366, 1555, 1867, 2515
XceI RCATGY 2 cut(s) 1757, 1825
XcmI CCANNNNNNNNNTGG 1 cut(s) 1872
XmaI CCCGGG 1 cut(s) 643
XmaJI CCTAGG 1 cut(s) 1645
XmiI GTMKAC 2 cut(s) 917, 1285
XmnI GAANNNNTTC 1 cut(s) 2656
XspI CTAG 5 cut(s) 695, 1440, 1646, 1895, 2583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.