Rmu_sc0002119.1_g000031
MYB Family

Protein LHY-like isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002119.1
OG0001426
Physical Location & Seq
Reverse (-)
169818 .. 180466
10649 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002119.1_g000031.1.cds

Sequence Viewer

Length: 2952 bp
atgagtcggcaccaccttgtcctcgcactctttgctctcctccttcctctggtcaaggccttcgcagacagcgaggtcattgtagtcggtggttggagacccattgagaacatcggtgatccccatgtgaaggagattgcagagttcgccgtgtcggagtacagccaatcccagaagaagaacttggtgtttcagagcgtggtccggggagagactcaggtcgtagcaggcatcaagtatcggctcgtcatatctgtcaaggaaggtgattccttcgagaattatgaggctgttgtatgggagaagagatggatgaaatcgcttcacctccgtgacgtgaacgcttctgatttcgccaagaaaagtagtgggttgttcacaccgcaacaccaacagtaccggatcactgtcaccaccatttcgattgtgccgatcaagtttttcgaggctattagatctctccagtgccggaaactatgccgccaccggcgagtgtgcggtgacaattccggctggtgtctcagtagcggagagagctctcatccgccatggaagttaaaggttttggcgtcttcttcttcgggttcattttgtagtagtagccccttctgcccgggtccagtaatggacaatttctcatctggggaagatttgatcgttaaggcaagaaagccatatactattaccaagcagcgagagcggtggactgaggaggagcataataggtttcttgaagccttgaagctctacgggcgagcatggcagcgcattgaagaacatataggaacaaagactgctgtgcagatccgaagtcatgcacagaagttcttttcaaagctggagaaggaggcagtcagtaaaggtgttcctgtaggacaatcaattgacatagatattccgcctccgcgccctaaaaggaaaccaagcaatccttatcctcggaagtctagtgaagctgctccaacatggtctacgtcgcatgtcggagcaaaggatggaaaacttgtgtcatcagcttcttcttcacattgtaaacaagcagtggacttggagaaaggaccactcgatgagagatccagtggagaagaaaagctaagttatggaaaagaaaacaaagatgaaagttgctcagaagtcttcaccttactctcagagtctcactgctcctctgtgtcttctgcaaacaaaagttccatacctgcacaagtggtactcagaaatgcttgcacttttagagagtttgtgccttcagtgaaaaaggtaatccctcgagatggcaatgaatcttatgtcactattgaacttaaaggaaatgagaatttgaagaaaactgatgccaaaaagatagttcaagataatgccacacgtgaagcctcaaagttggagaacactaatgcttttaagttggttcaaggtgagaaagcagatgatttgaattgttcattgccaacagatgggatgcgaagtactccgacctgcccgaggaacgttcctatacacatactagatgggagcgtaggagaatgtaatcaaactacaacccccgatttgtcattttcattccaggattctgtatttcatcctatgggaaagattcgtgtacagcctaacctgtttacaaatccagctgcatctactactactactgaacatgaaagtaatgtatcaagatcttgtattgaccaatcatttccagctattccacctccatttaccccattccaccacaatcaagaggactaccactcatctctttcctccacattttcaagtcttattgtgtcttctctgctacaaaaccctgcagcccatgctgcggctagctttgcagccacattctggccttacacgaatgtggagaacaaggaaggttctcctgcatgctctgccggaggttttccatctagccaaatgaattcccctccaaatatggcagcaattgctgctgccactgtagctgcagcaactgcatggtgggcagcccatggattgctccccttgtgcgctcctcttcaaactagctttagctgtcctgtgcctgtgcccatgactggagtttcatcaatggacaatgatcaagctcctgcagccgagacagagaaaggacaggattctcttcaagttccttgcttgcaggatcaactgcaggacccagaacagtcagaagctgtgcaagaacaacattcacctccaaaatcaccaaccacaacctcatcagactctgaaaatggaggtgcaaagcctgatattggatcaaaagctgatgataatgaggacctagcaacaactgaagttcaagatttgaacaaagcaaaaagcaaaaaacaggtggaccgttcttcgtgtggttcaaacacaacttcctgcagcgaagtagagacggatgcattagagaagcaagaaaaaggtgaggaagaacttaaagaacctgacataaacccagcttctgagtctagttatcgccgcactaggagtataagcaacatgagtgattcttggaaagagagacacatgaatgattcatggaaagaagtctctgaagaggggcgaatggcttttcaagcattattctcaagagaggtattgccccagagtttttcacctccacctgacctgaatgataaggggcatcaggacactatagaaggacagcaaaatagtggtgagaaagacggaagatctctaatgttagacctgaacagcaaggcctgggcaccattttgtcacccagaagtggagaaaattgcatcaccaccaggagggctcaacagtgcaggggggctgttgacattaggcctgggatatggaaagctaaaggctcgtcgaacaggattcaagccttacaaaaggtgctctgtagaggccaatgagaacagggtggcaaatgccagcagccattgtgaagagaaaggtcccaagaggcttcgcttggaaggggaagcttcaacttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001067 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0007275 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009648 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0010033 GO:0010035 GO:0010038 GO:0010228 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042493 GO:0042752 GO:0042754 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043393 GO:0043433 GO:0043496 GO:0043565 GO:0044092 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046677 GO:0046686 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048571 GO:0048573 GO:0048574 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051090 GO:0051098 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0060255 GO:0061458 GO:0065007 GO:0065009 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

983

Amino Acids

107.73

Weight (kDa)

6.4

Isoelectric Point (pI)

56.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 74
Acc36I ACCTGC 2 cut(s) 1207, 1484
AccB1I GGYRCC 2 cut(s) 9, 2713
AccB7I CCANNNNNTGG 2 cut(s) 1454, 1839
AccBSI CCGCTC 1 cut(s) 700
AccI GTMKAC 1 cut(s) 971
AccII CGCG 1 cut(s) 907
AclI AACGTT 1 cut(s) 1488
AclWI GGATC 6 cut(s) 113, 410, 799, 1068, 2145, 2260
AcsI RAATTY 2 cut(s) 1318, 1915
AcuI CTGAAG 3 cut(s) 1233, 2310, 2559
AcvI CACGTG 1 cut(s) 1367
AcyI GRCGYC 1 cut(s) 569
AfaI GTAC 5 cut(s) 161, 398, 1212, 1468, 1602
AflIII ACRYGT 1 cut(s) 1364
AjiI CACGTC 1 cut(s) 337
AjnI CCWGG 4 cut(s) 1563, 2708, 2755, 2796
AjuI GAANNNNNNNTTGG 2 cut(s) 167, 199
AleI CACNNNNGTG 2 cut(s) 330, 1853
Alw21I GWGCWC 2 cut(s) 539, 2855
Alw26I GTCTC 8 cut(s) 91, 206, 524, 1161, 2087, 2372, 2500, 2539
AlwI GGATC 6 cut(s) 113, 410, 799, 1068, 2145, 2260
AlwNI CAGNNNCTG 4 cut(s) 1967, 2168, 2222, 2447
Ama87I CYCGRG 3 cut(s) 613, 1269, 1480
AoxI GGCC 5 cut(s) 57, 1841, 2706, 2794, 2862
ApoI RAATTY 2 cut(s) 1318, 1915
AspLEI GCGC 3 cut(s) 768, 909, 2006
AspS9I GGNCC 7 cut(s) 202, 617, 1058, 2149, 2275, 2332, 2912
AsuC2I CCSGG 3 cut(s) 206, 614, 615
AsuNHI GCTAGC 1 cut(s) 1820
AvaI CYCGRG 3 cut(s) 613, 1269, 1480
AvaII GGWCC 7 cut(s) 202, 617, 1058, 2149, 2275, 2332, 2912
BaeGI GKGCMC 2 cut(s) 2046, 2716
BanI GGYRCC 2 cut(s) 9, 2713
BanII GRGCYC 2 cut(s) 539, 2766
BbrPI CACGTG 1 cut(s) 1367
BbsI GAAGAC 4 cut(s) 564, 1129, 1167, 1776
Bbv12I GWGCWC 2 cut(s) 539, 2855
BccI CCATC 6 cut(s) 303, 989, 1268, 1448, 1502, 1909
BceAI ACGGC 1 cut(s) 134
BciT130I CCWGG 4 cut(s) 1565, 2710, 2757, 2798
BclI TGATCA 1 cut(s) 2074
BcnI CCSGG 3 cut(s) 206, 614, 615
BcoDI GTCTC 8 cut(s) 91, 206, 524, 1161, 2087, 2372, 2500, 2539
BfaI CTAG 8 cut(s) 948, 1505, 1821, 1905, 2019, 2279, 2454, 2469
BfmI CTRYAG 9 cut(s) 870, 1803, 1953, 1959, 2085, 2144, 2365, 2640, 2856
BfuAI ACCTGC 2 cut(s) 1207, 1484
BglII AGATCT 3 cut(s) 455, 1670, 2678
BmcAI AGTACT 1 cut(s) 1468
Bme1390I CCNGG 7 cut(s) 206, 614, 615, 1565, 2710, 2757, 2798
Bme18I GGWCC 7 cut(s) 202, 617, 1058, 2149, 2275, 2332, 2912
BmeT110I CYCGRG 3 cut(s) 613, 1269, 1480
BmgBI CACGTC 1 cut(s) 337
BmgT120I GGNCC 7 cut(s) 202, 617, 1058, 2149, 2275, 2332, 2912
BmiI GGNNCC 5 cut(s) 11, 618, 2151, 2715, 2914
BmrFI CCNGG 7 cut(s) 206, 614, 615, 1565, 2710, 2757, 2798
BmsI GCATC 7 cut(s) 240, 1324, 1449, 1640, 2374, 2638, 2756
BmtI GCTAGC 1 cut(s) 1824
BoxI GACNNNNGTC 1 cut(s) 218
BpiI GAAGAC 4 cut(s) 564, 1129, 1167, 1776
BpmI CTGGAG 3 cut(s) 446, 860, 2073
BpuEI CTTGAG 1 cut(s) 2557
BpuMI CCSGG 3 cut(s) 206, 614, 615
BsaAI YACGTR 1 cut(s) 1367
BsaHI GRCGYC 1 cut(s) 569
BsaI GGTCTC 1 cut(s) 91
BsaJI CCNNGG 8 cut(s) 205, 548, 613, 938, 1481, 1984, 2709, 2797
BsaWI WCCGGW 1 cut(s) 399
Bse118I RCCGGY 1 cut(s) 486
Bse1I ACTGG 4 cut(s) 463, 620, 1077, 2056
Bse3DI GCAATG 2 cut(s) 1285, 1442
BseBI CCWGG 4 cut(s) 1565, 2710, 2757, 2798
BseDI CCNNGG 8 cut(s) 205, 548, 613, 938, 1481, 1984, 2709, 2797
BseGI GGATG 6 cut(s) 318, 541, 1000, 1464, 1579, 2389
BseMI GCAATG 2 cut(s) 1285, 1442
BseMII CTCAG 7 cut(s) 230, 535, 699, 1143, 1164, 1228, 2439
BseNI ACTGG 4 cut(s) 463, 620, 1077, 2056
BseRI GAGGAG 5 cut(s) 29, 725, 728, 1156, 1998
BseSI GKGCMC 2 cut(s) 2046, 2716
BseYI CCCAGC 1 cut(s) 2440
BsgI GTGCAG 3 cut(s) 821, 1185, 2793
Bsh1236I CGCG 1 cut(s) 907
BshFI GGCC 5 cut(s) 59, 1843, 2708, 2796, 2864
BshNI GGYRCC 2 cut(s) 9, 2713
BsiHKAI GWGCWC 2 cut(s) 539, 2855
BsiHKCI CYCGRG 3 cut(s) 613, 1269, 1480
BsiSI CCGG 7 cut(s) 205, 400, 469, 487, 510, 614, 1890
BslFI GGGAC 1 cut(s) 2898
BsmAI GTCTC 8 cut(s) 91, 206, 524, 1161, 2087, 2372, 2500, 2539
BsmBI CGTCTC 1 cut(s) 2372
BsmFI GGGAC 1 cut(s) 2898
BsnI GGCC 5 cut(s) 59, 1843, 2708, 2796, 2864
Bso31I GGTCTC 1 cut(s) 91
BsoBI CYCGRG 3 cut(s) 613, 1269, 1480
Bsp1286I GDGCHC 5 cut(s) 539, 2046, 2716, 2766, 2855
Bsp1407I TGTACA 1 cut(s) 1600
Bsp19I CCATGG 2 cut(s) 548, 1984
BspANI GGCC 5 cut(s) 59, 1843, 2708, 2796, 2864
BspCNI CTCAG 7 cut(s) 229, 534, 700, 1142, 1163, 1227, 2440
BspFNI CGCG 1 cut(s) 907
BspLI GGNNCC 5 cut(s) 11, 618, 2151, 2715, 2914
BspMAI CTGCAG 5 cut(s) 1807, 1963, 2089, 2148, 2369
BspMI ACCTGC 2 cut(s) 1207, 1484
BspOI GCTAGC 1 cut(s) 1824
BspPI GGATC 6 cut(s) 113, 410, 799, 1068, 2145, 2260
BspT107I GGYRCC 2 cut(s) 9, 2713
BspTNI GGTCTC 1 cut(s) 91
BsrBI CCGCTC 1 cut(s) 700
BsrDI GCAATG 2 cut(s) 1285, 1442
BsrFI RCCGGY 1 cut(s) 486
BsrGI TGTACA 1 cut(s) 1600
BsrI ACTGG 4 cut(s) 463, 620, 1077, 2056
BssAI RCCGGY 1 cut(s) 486
BssECI CCNNGG 8 cut(s) 205, 548, 613, 938, 1481, 1984, 2709, 2797
BssNI GRCGYC 1 cut(s) 569
BssT1I CCWWGG 2 cut(s) 548, 1984
Bst2UI CCWGG 4 cut(s) 1565, 2710, 2757, 2798
Bst4CI ACNGT 6 cut(s) 396, 409, 1954, 2160, 2336, 2771
Bst6I CTCTTC 5 cut(s) 299, 2016, 2121, 2535, 2898
BstACI GRCGYC 1 cut(s) 569
BstAPI GCANNNNNTGC 6 cut(s) 32, 1811, 1886, 1940, 1943, 1967
BstAUI TGTACA 1 cut(s) 1600
BstBAI YACGTR 1 cut(s) 1367
BstC8I GCNNGC 7 cut(s) 229, 756, 1225, 1822, 1882, 2132, 2890
BstDEI CTNAG 8 cut(s) 216, 521, 708, 1094, 1129, 1150, 1214, 2448
BstDSI CCRYGG 2 cut(s) 548, 1984
BstENI CCTNNNNNAGG 1 cut(s) 1480
BstF5I GGATG 6 cut(s) 318, 541, 1000, 1464, 1579, 2389
BstFNI CGCG 1 cut(s) 907
BstHHI GCGC 3 cut(s) 768, 909, 2006
BstMAI GTCTC 8 cut(s) 91, 206, 524, 1161, 2087, 2372, 2500, 2539
BstNI CCWGG 4 cut(s) 1565, 2710, 2757, 2798
BstNSI RCATGY 2 cut(s) 983, 1884
BstPAI GACNNNNGTC 1 cut(s) 218
BstSCI CCNGG 7 cut(s) 204, 612, 613, 1563, 2708, 2755, 2796
BstSFI CTRYAG 9 cut(s) 870, 1803, 1953, 1959, 2085, 2144, 2365, 2640, 2856
BstSLI GKGCMC 2 cut(s) 2046, 2716
BstUI CGCG 1 cut(s) 907
BstV2I GAAGAC 4 cut(s) 564, 1129, 1167, 1776
BstX2I RGATCY 5 cut(s) 455, 804, 1073, 1670, 2678
BstYI RGATCY 5 cut(s) 455, 804, 1073, 1670, 2678
BsuRI GGCC 5 cut(s) 59, 1843, 2708, 2796, 2864
BtgI CCRYGG 2 cut(s) 548, 1984
BtrI CACGTC 1 cut(s) 337
BtsCI GGATG 6 cut(s) 318, 541, 1000, 1464, 1579, 2389
BtsI GCAGTG 2 cut(s) 1047, 1159
BtsIMutI CAGTG 8 cut(s) 405, 470, 1047, 1084, 1159, 1257, 1950, 2776
BveI ACCTGC 2 cut(s) 1207, 1484
Cac8I GCNNGC 7 cut(s) 229, 756, 1225, 1822, 1882, 2132, 2890
CaiI CAGNNNCTG 4 cut(s) 1967, 2168, 2222, 2447
CfoI GCGC 3 cut(s) 768, 909, 2006
Cfr10I RCCGGY 1 cut(s) 486
Cfr13I GGNCC 7 cut(s) 202, 617, 1058, 2149, 2275, 2332, 2912
Cfr9I CCCGGG 1 cut(s) 613
CseI GACGC 1 cut(s) 558
Csp6I GTAC 5 cut(s) 160, 397, 1211, 1467, 1601
CviQI GTAC 5 cut(s) 160, 397, 1211, 1467, 1601
DdeI CTNAG 8 cut(s) 216, 521, 708, 1094, 1129, 1150, 1214, 2448
DrdI GACNNNNNNGTC 1 cut(s) 74
DseDI GACNNNNNNGTC 1 cut(s) 74
Eam1104I CTCTTC 5 cut(s) 299, 2016, 2121, 2535, 2898
EarI CTCTTC 5 cut(s) 299, 2016, 2121, 2535, 2898
EciI GGCGGA 2 cut(s) 534, 888
Ecl136II GAGCTC 1 cut(s) 537
Eco130I CCWWGG 2 cut(s) 548, 1984
Eco147I AGGCCT 3 cut(s) 59, 2708, 2796
Eco24I GRGCYC 2 cut(s) 539, 2766
Eco31I GGTCTC 1 cut(s) 91
Eco47I GGWCC 7 cut(s) 202, 617, 1058, 2149, 2275, 2332, 2912
Eco53kI GAGCTC 1 cut(s) 537
Eco57I CTGAAG 3 cut(s) 1233, 2310, 2559
Eco72I CACGTG 1 cut(s) 1367
Eco88I CYCGRG 3 cut(s) 613, 1269, 1480
EcoICRI GAGCTC 1 cut(s) 537
EcoNI CCTNNNNNAGG 1 cut(s) 1480
EcoO109I RGGNCCY 3 cut(s) 2149, 2275, 2912
EcoRI GAATTC 1 cut(s) 1915
EcoRII CCWGG 4 cut(s) 1563, 2708, 2755, 2796
EcoT14I CCWWGG 2 cut(s) 548, 1984
EcoT22I ATGCAT 1 cut(s) 2389
EcoT38I GRGCYC 2 cut(s) 539, 2766
ErhI CCWWGG 2 cut(s) 548, 1984
Esp3I CGTCTC 1 cut(s) 2372
FalI AAGNNNNNCTT 4 cut(s) 167, 199, 916, 948
FaqI GGGAC 1 cut(s) 2898
FbaI TGATCA 1 cut(s) 2074
FblI GTMKAC 1 cut(s) 971
FokI GGATG 6 cut(s) 325, 528, 1007, 1471, 1566, 2396
FriOI GRGCYC 2 cut(s) 539, 2766
FspBI CTAG 8 cut(s) 948, 1505, 1821, 1905, 2019, 2279, 2454, 2469
GlaI GCGC 3 cut(s) 767, 908, 2005
GsaI CCCAGC 1 cut(s) 2444
GsuI CTGGAG 3 cut(s) 446, 860, 2073
HaeIII GGCC 5 cut(s) 59, 1843, 2708, 2796, 2864
HapII CCGG 7 cut(s) 205, 400, 469, 487, 510, 614, 1890
HgaI GACGC 1 cut(s) 558
HhaI GCGC 3 cut(s) 768, 909, 2006
Hin1I GRCGYC 1 cut(s) 569
Hin6I GCGC 3 cut(s) 766, 907, 2004
HinP1I GCGC 3 cut(s) 766, 907, 2004
HincII GTYRAC 1 cut(s) 2787
HindII GTYRAC 1 cut(s) 2787
HindIII AAGCTT 1 cut(s) 2940
HpaII CCGG 7 cut(s) 205, 400, 469, 487, 510, 614, 1890
Hpy188III TCNNGA 9 cut(s) 277, 731, 1271, 1352, 1668, 1733, 2297, 2574, 2633
Hpy99I CGWCG 2 cut(s) 979, 2826
HpyCH4III ACNGT 6 cut(s) 396, 409, 1954, 2160, 2336, 2771
HpyCH4IV ACGT 4 cut(s) 336, 974, 1366, 1488
HpyF3I CTNAG 8 cut(s) 216, 521, 708, 1094, 1129, 1150, 1214, 2448
HpySE526I ACGT 4 cut(s) 336, 974, 1366, 1488
Hsp92I GRCGYC 1 cut(s) 569
HspAI GCGC 3 cut(s) 766, 907, 2004
Ksp22I TGATCA 1 cut(s) 2074
LmnI GCTCC 8 cut(s) 715, 964, 986, 1169, 1512, 1998, 2011, 2086
LweI GCATC 7 cut(s) 240, 1324, 1449, 1640, 2374, 2638, 2756
MaeI CTAG 8 cut(s) 948, 1505, 1821, 1905, 2019, 2279, 2454, 2469
MaeII ACGT 4 cut(s) 336, 974, 1366, 1488
MaeIII GTNAC 5 cut(s) 332, 409, 500, 1291, 2723
MbiI CCGCTC 1 cut(s) 700
MfeI CAATTG 2 cut(s) 882, 1938
MflI RGATCY 5 cut(s) 455, 804, 1073, 1670, 2678
MhlI GDGCHC 5 cut(s) 539, 2046, 2716, 2766, 2855
MluCI AATT 9 cut(s) 280, 505, 631, 882, 1318, 1435, 1915, 1938, 2742
MlyI GAGTC 5 cut(s) 13, 208, 1163, 2213, 2459
MmeI TCCRAC 6 cut(s) 74, 135, 964, 986, 1362, 1496
Mph1103I ATGCAT 1 cut(s) 2389
MseI TTAA 5 cut(s) 557, 660, 1305, 1401, 2421
MslI CAYNNNNRTG 3 cut(s) 330, 1853, 2514
MspA1I CMGCKG 1 cut(s) 1628
MspI CCGG 7 cut(s) 205, 400, 469, 487, 510, 614, 1890
MspR9I CCNGG 7 cut(s) 206, 614, 615, 1565, 2710, 2757, 2798
MunI CAATTG 2 cut(s) 882, 1938
MvaI CCWGG 4 cut(s) 1565, 2710, 2757, 2798
MvnI CGCG 1 cut(s) 907
NciI CCSGG 3 cut(s) 206, 614, 615
NcoI CCATGG 2 cut(s) 548, 1984
NheI GCTAGC 1 cut(s) 1820
NlaIV GGNNCC 5 cut(s) 11, 618, 2151, 2715, 2914
NmeAIII GCCGAG 1 cut(s) 2116
NmuCI GTSAC 5 cut(s) 332, 409, 500, 1291, 2723
NsiI ATGCAT 1 cut(s) 2389
NspI RCATGY 2 cut(s) 983, 1884
OliI CACNNNNGTG 2 cut(s) 330, 1853
PaeI GCATGC 1 cut(s) 1884
PaeR7I CTCGAG 1 cut(s) 1269
PceI AGGCCT 3 cut(s) 59, 2708, 2796
PcsI WCGNNNNNNNCGW 2 cut(s) 69, 428
PfeI GAWTC 8 cut(s) 269, 1283, 1568, 1594, 2111, 2492, 2519, 2832
PflMI CCANNNNNTGG 2 cut(s) 1454, 1839
PfoI TCCNGGA 1 cut(s) 1563
PleI GAGTC 5 cut(s) 12, 208, 1162, 2213, 2458
PmaCI CACGTG 1 cut(s) 1367
PmlI CACGTG 1 cut(s) 1367
PpsI GAGTC 5 cut(s) 12, 208, 1162, 2213, 2458
Ppu21I YACGTR 1 cut(s) 1367
PpuMI RGGWCCY 3 cut(s) 2149, 2275, 2912
PshAI GACNNNNGTC 1 cut(s) 218
Psp124BI GAGCTC 1 cut(s) 539
Psp1406I AACGTT 1 cut(s) 1488
Psp5II RGGWCCY 3 cut(s) 2149, 2275, 2912
Psp6I CCWGG 4 cut(s) 1563, 2708, 2755, 2796
PspCI CACGTG 1 cut(s) 1367
PspFI CCCAGC 1 cut(s) 2440
PspGI CCWGG 4 cut(s) 1563, 2708, 2755, 2796
PspN4I GGNNCC 5 cut(s) 11, 618, 2151, 2715, 2914
PspPI GGNCC 7 cut(s) 202, 617, 1058, 2149, 2275, 2332, 2912
PspPPI RGGWCCY 3 cut(s) 2149, 2275, 2912
PstI CTGCAG 5 cut(s) 1807, 1963, 2089, 2148, 2369
PstNI CAGNNNCTG 4 cut(s) 1967, 2168, 2222, 2447
PsuI RGATCY 5 cut(s) 455, 804, 1073, 1670, 2678
PvuII CAGCTG 1 cut(s) 1628
RsaI GTAC 5 cut(s) 161, 398, 1212, 1468, 1602
RsaNI GTAC 5 cut(s) 160, 397, 1211, 1467, 1601
RseI CAYNNNNRTG 3 cut(s) 330, 1853, 2514
SacI GAGCTC 1 cut(s) 539
SaqAI TTAA 5 cut(s) 557, 660, 1305, 1401, 2421
Sau96I GGNCC 7 cut(s) 202, 617, 1058, 2149, 2275, 2332, 2912
ScaI AGTACT 1 cut(s) 1468
SchI GAGTC 5 cut(s) 13, 208, 1163, 2213, 2459
ScrFI CCNGG 7 cut(s) 206, 614, 615, 1565, 2710, 2757, 2798
SduI GDGCHC 5 cut(s) 539, 2046, 2716, 2766, 2855
SfaNI GCATC 7 cut(s) 240, 1324, 1449, 1640, 2374, 2638, 2756
SfcI CTRYAG 9 cut(s) 870, 1803, 1953, 1959, 2085, 2144, 2365, 2640, 2856
Sfr274I CTCGAG 1 cut(s) 1269
SgrAI CRCCGGYG 1 cut(s) 486
SinI GGWCC 7 cut(s) 202, 617, 1058, 2149, 2275, 2332, 2912
SlaI CTCGAG 1 cut(s) 1269
SmaI CCCGGG 1 cut(s) 615
SmiMI CAYNNNNRTG 3 cut(s) 330, 1853, 2514
SmlI CTYRAG 2 cut(s) 1269, 2572
SmoI CTYRAG 2 cut(s) 1269, 2572
SphI GCATGC 1 cut(s) 1884
Sse9I AATT 9 cut(s) 280, 505, 631, 882, 1318, 1435, 1915, 1938, 2742
SseBI AGGCCT 3 cut(s) 59, 2708, 2796
SspMI CTAG 8 cut(s) 948, 1505, 1821, 1905, 2019, 2279, 2454, 2469
SstI GAGCTC 1 cut(s) 539
StuI AGGCCT 3 cut(s) 59, 2708, 2796
StyD4I CCNGG 7 cut(s) 204, 612, 613, 1563, 2708, 2755, 2796
StyI CCWWGG 2 cut(s) 548, 1984
TaaI ACNGT 6 cut(s) 396, 409, 1954, 2160, 2336, 2771
TaiI ACGT 4 cut(s) 339, 977, 1369, 1491
TaqI TCGA 6 cut(s) 276, 422, 444, 1065, 1270, 2824
TasI AATT 9 cut(s) 280, 505, 631, 882, 1318, 1435, 1915, 1938, 2742
TatI WGTACW 3 cut(s) 159, 1466, 1600
TauI GCSGC 3 cut(s) 483, 1820, 2466
TfiI GAWTC 8 cut(s) 269, 1283, 1568, 1594, 2111, 2492, 2519, 2832
Tru1I TTAA 5 cut(s) 557, 660, 1305, 1401, 2421
Tru9I TTAA 5 cut(s) 557, 660, 1305, 1401, 2421
TscAI CASTG 8 cut(s) 412, 470, 1047, 1084, 1166, 1257, 1957, 2776
TseFI GTSAC 5 cut(s) 332, 409, 500, 1291, 2723
Tsp45I GTSAC 5 cut(s) 332, 409, 500, 1291, 2723
TspGWI ACGGA 3 cut(s) 320, 2396, 2688
TspMI CCCGGG 1 cut(s) 613
TspRI CASTG 8 cut(s) 412, 470, 1047, 1084, 1166, 1257, 1957, 2776
Van91I CCANNNNNTGG 2 cut(s) 1454, 1839
VpaK11BI GGWCC 7 cut(s) 202, 617, 1058, 2149, 2275, 2332, 2912
XagI CCTNNNNNAGG 1 cut(s) 1480
XapI RAATTY 2 cut(s) 1318, 1915
XceI RCATGY 2 cut(s) 983, 1884
XhoI CTCGAG 1 cut(s) 1269
XmaI CCCGGG 1 cut(s) 613
XmiI GTMKAC 1 cut(s) 971
XspI CTAG 8 cut(s) 948, 1505, 1821, 1905, 2019, 2279, 2454, 2469
ZrmI AGTACT 1 cut(s) 1468
Zsp2I ATGCAT 1 cut(s) 2389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.