Prupe.2G203200_v2.0.a1

calcium-binding protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
23908650 .. 23911953
3304 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G203200.1

Sequence Viewer

Length: 1383 bp
ATGGTTGCGGGTTCTAATGCTGCGAAGCTCAATCTTAGAGAAAGTGAGAGCCTTTCAAGAAGCTATAGTAGCGGCTGTGTATCAGTTTCGTCAATGACAGAGCCAAATCCAGAGACTTTGACAGGGTCTTGCTTAGTTTCGTGCACCACTTTCAATATTTTGGCTCCCATTTACAAAAGACTCGATCAACAGAATCAAGGCATTCGTGAGAGCGAGTTCAGAGCATTCTGGGTGGCCAGGAACCAGAGGATTTTGGATTGGTTGCTCTATGAATCTTCTGCAATTATATGTCTCCAGGAGTTTTGGGTTGGAAATGAAGAATTTGTGAATATGTACCTGGAGAGGCTTGGGGATGCAGGCTATAGTACCTTCAAGCTTGCGCGAACGAACAACCGTGGAGATGGTTTGCTCACTGCTGTGCGAAGAGACTGCTTTAGGGTTCTAAACTATCGAGAGTTGCACTTTAATGATTTTGGAGACCGTGTTGCTCAGTTGTTACATGTTCAGTTAGCTGCCCCCTTTTCACAAAACCAGAAAGGCAATGTTCAGCAAGAAATGCTAATTATGAATACGCACTTGTTATTTCCTCACGATTCCAGTCTCTCAATAGTAAGATTGCATCAGGTTTACAAAATTTTGCAATTTGTGGAATCTTATCAGAATGAAAACAAACTAAACCCCATGCCCATCATACTCTGTGGTGACTGGAATGGAAGTAAGCGTGGCCATGTGTACAAATTCCTTAGATCTCAGGGGTTTGTATCAACATATGATACTGCTCATCAATATACTGATGCAGATGCTCACAAGTGGGTTAGCCACCGCAATCATAGGGGAAACATCTGTGGTGTCGACTTCATTTGGCTTTGTAATCCCAATAAGTCACGTAAACCACTAAAGACTAGTTGGTGTGAAGCTGTTTTTGGTATATTAAGGCGCCAGCTCCGAAAAGCTTCAATGGCTGAAAATGATGCATTTGCCTTTTTGAAGGGTGATAGCCATGGTGATTTTATTACATCCTCAGCTTTCTGTGAAGCACTCCATCAGGTTAATTTAATTGGTCAACCTTCGGGACTGGGTTTCCAGGAGACAAGGGATCTCTGGATCCAAGCAGATGTTGATGCAAACGGTGTTCTTGATTATGAAGAATTTAAGAATAGGATCTGGATATCTACAGTGTCAGAGGAAAAGGAAAACCTTAATGGAAGTAGAGAGGAGTCCATACGAGGCACAGAGGACGCCCTTGGATTCAACGTGAAGAACGCAGTTCTGTACCCCCGTGAGGCAGAAAAGGGAATATGGCCTGAAGATTATACTCTTTCTGATCATGCCCGACTCTCCGTTGTACTCTCACCAGAAAGAGTGTGGTGTTCTCAGTCATAA
Functional Annotation

Protein Analysis

461

Amino Acids

52.49

Weight (kDa)

6.25

Isoelectric Point (pI)

41.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013430)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 936
AccI GTMKAC 1 cut(s) 852
AccII CGCG 1 cut(s) 382
AciI CCGC 3 cut(s) 8, 72, 823
AclWI GGATC 4 cut(s) 1099, 1104, 1112, 1169
AcoI YGGCCR 2 cut(s) 234, 724
AcsI RAATTY 4 cut(s) 320, 633, 737, 1148
AcuI CTGAAG 1 cut(s) 1326
AcyI GRCGYC 2 cut(s) 937, 1239
AfaI GTAC 5 cut(s) 335, 367, 734, 1274, 1347
AfiI CCNNNNNNNGG 1 cut(s) 1282
AflIII ACRYGT 1 cut(s) 499
AgsI TTSAA 6 cut(s) 57, 154, 373, 957, 988, 1252
AhlI ACTAGT 1 cut(s) 902
AjnI CCWGG 4 cut(s) 236, 294, 336, 1083
AjuI GAANNNNNNNTTGG 2 cut(s) 906, 938
AleI CACNNNNGTG 1 cut(s) 416
AluBI AGCT 8 cut(s) 28, 63, 376, 512, 917, 943, 953, 1025
AluI AGCT 8 cut(s) 28, 63, 376, 512, 917, 943, 953, 1025
Alw21I GWGCWC 1 cut(s) 146
Alw26I GTCTC 6 cut(s) 107, 296, 420, 471, 605, 1082
Alw44I GTGCAC 1 cut(s) 142
AlwI GGATC 4 cut(s) 1099, 1104, 1112, 1169
AoxI GGCC 3 cut(s) 234, 724, 1301
ApaLI GTGCAC 1 cut(s) 142
ApeKI GCWGC 2 cut(s) 20, 512
ApoI RAATTY 4 cut(s) 320, 633, 737, 1148
Asp700I GAANNNNTTC 1 cut(s) 952
AspLEI GCGC 2 cut(s) 382, 939
AsuHPI GGTGA 4 cut(s) 713, 1004, 1016, 1344
BaeGI GKGCMC 1 cut(s) 146
BalI TGGCCA 2 cut(s) 236, 726
BamHI GGATCC 1 cut(s) 1104
BanI GGYRCC 1 cut(s) 936
Bbv12I GWGCWC 1 cut(s) 146
BbvCI CCTCAGC 1 cut(s) 1021
BbvI GCAGC 2 cut(s) 7, 499
BccI CCATC 3 cut(s) 395, 695, 1050
BcgI CGANNNNNNTGC 2 cut(s) 411, 445
BciT130I CCWGG 4 cut(s) 238, 296, 338, 1085
BclI TGATCA 1 cut(s) 1324
BcoDI GTCTC 6 cut(s) 107, 296, 420, 471, 605, 1082
BcuI ACTAGT 1 cut(s) 902
BfaI CTAG 1 cut(s) 903
BfmI CTRYAG 3 cut(s) 64, 361, 1173
BfoI RGCGCY 1 cut(s) 940
BglII AGATCT 1 cut(s) 746
BisI GCNGC 3 cut(s) 21, 73, 513
BlsI GCNGC 3 cut(s) 22, 74, 514
Bme1390I CCNGG 4 cut(s) 238, 296, 338, 1085
BmiI GGNNCC 4 cut(s) 165, 242, 938, 1106
BmrFI CCNGG 4 cut(s) 238, 296, 338, 1085
BmrI ACTGGG 1 cut(s) 1085
BmsI GCATC 6 cut(s) 343, 628, 784, 790, 961, 1111
BmuI ACTGGG 1 cut(s) 1085
BpmI CTGGAG 2 cut(s) 278, 359
Bpu10I CCTNAGC 1 cut(s) 1021
BsaAI YACGTR 1 cut(s) 887
BsaHI GRCGYC 2 cut(s) 937, 1239
BsaI GGTCTC 1 cut(s) 471
BsaJI CCNNGG 3 cut(s) 394, 1000, 1243
BsaXI ACNNNNNCTCC 2 cut(s) 468, 498
Bsc4I CCNNNNNNNGG 1 cut(s) 1282
Bse1I ACTGG 3 cut(s) 597, 710, 1080
Bse3DI GCAATG 1 cut(s) 547
BseBI CCWGG 4 cut(s) 238, 296, 338, 1085
BseDI CCNNGG 3 cut(s) 394, 1000, 1243
BseGI GGATG 2 cut(s) 358, 1016
BseLI CCNNNNNNNGG 1 cut(s) 1282
BseMI GCAATG 1 cut(s) 547
BseMII CTCAG 3 cut(s) 503, 764, 1035
BseNI ACTGG 3 cut(s) 597, 710, 1080
BseRI GAGGAG 1 cut(s) 1229
BseSI GKGCMC 1 cut(s) 146
BseXI GCAGC 2 cut(s) 7, 499
Bsh1236I CGCG 1 cut(s) 382
BshFI GGCC 3 cut(s) 236, 726, 1303
BshNI GGYRCC 1 cut(s) 936
BsiHKAI GWGCWC 1 cut(s) 146
BslFI GGGAC 1 cut(s) 1086
BslI CCNNNNNNNGG 1 cut(s) 1282
BsmAI GTCTC 6 cut(s) 107, 296, 420, 471, 605, 1082
BsmFI GGGAC 1 cut(s) 1086
BsmI GAATGC 2 cut(s) 201, 224
BsnI GGCC 3 cut(s) 236, 726, 1303
Bso31I GGTCTC 1 cut(s) 471
Bsp1286I GDGCHC 1 cut(s) 146
Bsp1407I TGTACA 1 cut(s) 732
Bsp143I GATC 6 cut(s) 184, 746, 1096, 1104, 1161, 1324
Bsp19I CCATGG 1 cut(s) 1000
BspACI CCGC 3 cut(s) 8, 72, 823
BspANI GGCC 3 cut(s) 236, 726, 1303
BspCNI CTCAG 3 cut(s) 502, 763, 1034
BspFNI CGCG 1 cut(s) 382
BspLI GGNNCC 4 cut(s) 165, 242, 938, 1106
BspPI GGATC 4 cut(s) 1099, 1104, 1112, 1169
BspT107I GGYRCC 1 cut(s) 936
BspTNI GGTCTC 1 cut(s) 471
BsrDI GCAATG 1 cut(s) 547
BsrGI TGTACA 1 cut(s) 732
BsrI ACTGG 3 cut(s) 597, 710, 1080
BssECI CCNNGG 3 cut(s) 394, 1000, 1243
BssMI GATC 6 cut(s) 184, 746, 1096, 1104, 1161, 1324
BssNI GRCGYC 2 cut(s) 937, 1239
BssT1I CCWWGG 2 cut(s) 1000, 1243
Bst2UI CCWGG 4 cut(s) 238, 296, 338, 1085
Bst4CI ACNGT 4 cut(s) 395, 482, 1130, 1177
Bst6I CTCTTC 1 cut(s) 418
BstACI GRCGYC 2 cut(s) 937, 1239
BstAPI GCANNNNNTGC 1 cut(s) 556
BstAUI TGTACA 1 cut(s) 732
BstBAI YACGTR 1 cut(s) 887
BstC8I GCNNGC 3 cut(s) 358, 378, 941
BstDEI CTNAG 7 cut(s) 35, 133, 489, 743, 750, 1021, 1374
BstDSI CCRYGG 2 cut(s) 394, 1000
BstF5I GGATG 2 cut(s) 358, 1016
BstFNI CGCG 1 cut(s) 382
BstH2I RGCGCY 1 cut(s) 940
BstHHI GCGC 2 cut(s) 382, 939
BstKTI GATC 6 cut(s) 187, 749, 1099, 1107, 1164, 1327
BstMAI GTCTC 6 cut(s) 107, 296, 420, 471, 605, 1082
BstMBI GATC 6 cut(s) 184, 746, 1096, 1104, 1161, 1324
BstMWI GCNNNNNNNGC 3 cut(s) 69, 556, 959
BstNI CCWGG 4 cut(s) 238, 296, 338, 1085
BstNSI RCATGY 1 cut(s) 503
BstSCI CCNGG 4 cut(s) 236, 294, 336, 1083
BstSFI CTRYAG 3 cut(s) 64, 361, 1173
BstSLI GKGCMC 1 cut(s) 146
BstUI CGCG 1 cut(s) 382
BstV1I GCAGC 2 cut(s) 7, 499
BstX2I RGATCY 4 cut(s) 746, 1096, 1104, 1161
BstYI RGATCY 4 cut(s) 746, 1096, 1104, 1161
BsuRI GGCC 3 cut(s) 236, 726, 1303
BtgI CCRYGG 2 cut(s) 394, 1000
BtsCI GGATG 2 cut(s) 358, 1016
BtsI GCAGTG 1 cut(s) 411
BtsIMutI CAGTG 2 cut(s) 411, 1182
Cac8I GCNNGC 3 cut(s) 358, 378, 941
CfoI GCGC 2 cut(s) 382, 939
CseI GACGC 1 cut(s) 1247
Csp6I GTAC 5 cut(s) 334, 366, 733, 1273, 1346
CviAII CATG 5 cut(s) 500, 682, 728, 1001, 1328
CviQI GTAC 5 cut(s) 334, 366, 733, 1273, 1346
DdeI CTNAG 7 cut(s) 35, 133, 489, 743, 750, 1021, 1374
DinI GGCGCC 1 cut(s) 938
DpnI GATC 6 cut(s) 186, 748, 1098, 1106, 1163, 1326
DpnII GATC 6 cut(s) 184, 746, 1096, 1104, 1161, 1324
EaeI YGGCCR 2 cut(s) 234, 724
Eam1104I CTCTTC 1 cut(s) 418
EarI CTCTTC 1 cut(s) 418
Eco130I CCWWGG 2 cut(s) 1000, 1243
Eco31I GGTCTC 1 cut(s) 471
Eco32I GATATC 1 cut(s) 1170
Eco57I CTGAAG 1 cut(s) 1326
EcoRII CCWGG 4 cut(s) 236, 294, 336, 1083
EcoRV GATATC 1 cut(s) 1170
EcoT14I CCWWGG 2 cut(s) 1000, 1243
EcoT22I ATGCAT 1 cut(s) 976
EgeI GGCGCC 1 cut(s) 938
EheI GGCGCC 1 cut(s) 938
ErhI CCWWGG 2 cut(s) 1000, 1243
FaeI CATG 5 cut(s) 503, 685, 731, 1004, 1331
FaqI GGGAC 1 cut(s) 1086
FatI CATG 5 cut(s) 499, 681, 727, 1000, 1327
FauNDI CATATG 1 cut(s) 769
FbaI TGATCA 1 cut(s) 1324
FblI GTMKAC 1 cut(s) 852
Fnu4HI GCNGC 3 cut(s) 21, 73, 513
FokI GGATG 2 cut(s) 365, 1003
Fsp4HI GCNGC 3 cut(s) 21, 73, 513
FspBI CTAG 1 cut(s) 903
GlaI GCGC 2 cut(s) 381, 938
GluI GCNGC 3 cut(s) 21, 73, 513
GsuI CTGGAG 2 cut(s) 278, 359
HaeII RGCGCY 1 cut(s) 940
HaeIII GGCC 3 cut(s) 236, 726, 1303
HgaI GACGC 1 cut(s) 1247
HhaI GCGC 2 cut(s) 382, 939
Hin1I GRCGYC 2 cut(s) 937, 1239
Hin1II CATG 5 cut(s) 503, 685, 731, 1004, 1331
Hin6I GCGC 2 cut(s) 380, 937
HinP1I GCGC 2 cut(s) 380, 937
HincII GTYRAC 2 cut(s) 853, 1064
HindII GTYRAC 2 cut(s) 853, 1064
HindIII AAGCTT 2 cut(s) 374, 951
HinfI GANTC 8 cut(s) 180, 193, 272, 593, 650, 1217, 1248, 1335
HphI GGTGA 4 cut(s) 713, 1004, 1016, 1344
Hpy166II GTNNAC 6 cut(s) 144, 628, 733, 853, 890, 1064
Hpy188I TCNGA 5 cut(s) 221, 660, 947, 1183, 1324
Hpy188III TCNNGA 9 cut(s) 57, 110, 206, 452, 590, 1071, 1102, 1136, 1165
Hpy8I GTNNAC 6 cut(s) 144, 628, 733, 853, 890, 1064
HpyAV CCTTC 3 cut(s) 379, 982, 1077
HpyCH4III ACNGT 4 cut(s) 395, 482, 1130, 1177
HpyCH4IV ACGT 2 cut(s) 886, 1254
HpyCH4V TGCA 9 cut(s) 144, 281, 356, 460, 619, 640, 797, 974, 1124
HpyF10VI GCNNNNNNNGC 3 cut(s) 69, 556, 959
HpyF3I CTNAG 7 cut(s) 35, 133, 489, 743, 750, 1021, 1374
HpySE526I ACGT 2 cut(s) 886, 1254
Hsp92I GRCGYC 2 cut(s) 937, 1239
Hsp92II CATG 5 cut(s) 503, 685, 731, 1004, 1331
HspAI GCGC 2 cut(s) 380, 937
KasI GGCGCC 1 cut(s) 936
Ksp22I TGATCA 1 cut(s) 1324
Kzo9I GATC 6 cut(s) 184, 746, 1096, 1104, 1161, 1324
LmnI GCTCC 2 cut(s) 169, 948
Lsp1109I GCAGC 2 cut(s) 7, 499
LweI GCATC 6 cut(s) 343, 628, 784, 790, 961, 1111
MaeI CTAG 1 cut(s) 903
MaeII ACGT 2 cut(s) 886, 1254
MaeIII GTNAC 3 cut(s) 495, 701, 882
MalI GATC 6 cut(s) 186, 748, 1098, 1106, 1163, 1326
MboI GATC 6 cut(s) 184, 746, 1096, 1104, 1161, 1324
MboII GAAGA 6 cut(s) 267, 329, 435, 1157, 1270, 1319
MflI RGATCY 4 cut(s) 746, 1096, 1104, 1161
MhlI GDGCHC 1 cut(s) 146
MlsI TGGCCA 2 cut(s) 236, 726
MluCI AATT 9 cut(s) 282, 320, 561, 633, 641, 737, 1051, 1056, 1148
MluNI TGGCCA 2 cut(s) 236, 726
Mly113I GGCGCC 1 cut(s) 937
MlyI GAGTC 3 cut(s) 174, 1226, 1329
MmeI TCCRAC 1 cut(s) 289
MnlI CCTC 9 cut(s) 240, 336, 597, 1030, 1177, 1207, 1220, 1228, 1276
Mox20I TGGCCA 2 cut(s) 236, 726
Mph1103I ATGCAT 1 cut(s) 976
MroXI GAANNNNTTC 1 cut(s) 952
MscI TGGCCA 2 cut(s) 236, 726
MseI TTAA 6 cut(s) 465, 932, 1050, 1055, 1152, 1200
MslI CAYNNNNRTG 2 cut(s) 416, 465
Msp20I TGGCCA 2 cut(s) 236, 726
MspR9I CCNGG 4 cut(s) 238, 296, 338, 1085
Mva1269I GAATGC 2 cut(s) 201, 224
MvaI CCWGG 4 cut(s) 238, 296, 338, 1085
MvnI CGCG 1 cut(s) 382
MwoI GCNNNNNNNGC 3 cut(s) 69, 556, 959
NarI GGCGCC 1 cut(s) 937
NcoI CCATGG 1 cut(s) 1000
NdeI CATATG 1 cut(s) 769
NdeII GATC 6 cut(s) 184, 746, 1096, 1104, 1161, 1324
NlaIII CATG 5 cut(s) 503, 685, 731, 1004, 1331
NlaIV GGNNCC 4 cut(s) 165, 242, 938, 1106
NmuCI GTSAC 2 cut(s) 701, 882
NsiI ATGCAT 1 cut(s) 976
NspI RCATGY 1 cut(s) 503
OliI CACNNNNGTG 1 cut(s) 416
PciI ACATGT 1 cut(s) 499
PctI GAATGC 2 cut(s) 201, 224
PdmI GAANNNNTTC 1 cut(s) 952
PfeI GAWTC 5 cut(s) 193, 272, 593, 650, 1248
PflFI GACNNNGTC 1 cut(s) 124
PfoI TCCNGGA 2 cut(s) 294, 1083
PkrI GCNGC 3 cut(s) 22, 74, 514
PleI GAGTC 3 cut(s) 174, 1225, 1329
PluTI GGCGCC 1 cut(s) 940
PpsI GAGTC 3 cut(s) 174, 1225, 1329
Ppu21I YACGTR 1 cut(s) 887
PscI ACATGT 1 cut(s) 499
Psp6I CCWGG 4 cut(s) 236, 294, 336, 1083
PspGI CCWGG 4 cut(s) 236, 294, 336, 1083
PspN4I GGNNCC 4 cut(s) 165, 242, 938, 1106
PsuI RGATCY 4 cut(s) 746, 1096, 1104, 1161
PsyI GACNNNGTC 1 cut(s) 124
RsaI GTAC 5 cut(s) 335, 367, 734, 1274, 1347
RsaNI GTAC 5 cut(s) 334, 366, 733, 1273, 1346
RseI CAYNNNNRTG 2 cut(s) 416, 465
SalI GTCGAC 1 cut(s) 851
SaqAI TTAA 6 cut(s) 465, 932, 1050, 1055, 1152, 1200
SatI GCNGC 3 cut(s) 21, 73, 513
Sau3AI GATC 6 cut(s) 184, 746, 1096, 1104, 1161, 1324
SchI GAGTC 3 cut(s) 174, 1226, 1329
ScrFI CCNGG 4 cut(s) 238, 296, 338, 1085
SduI GDGCHC 1 cut(s) 146
SfaNI GCATC 6 cut(s) 343, 628, 784, 790, 961, 1111
SfcI CTRYAG 3 cut(s) 64, 361, 1173
SfoI GGCGCC 1 cut(s) 938
SmiMI CAYNNNNRTG 2 cut(s) 416, 465
SpeI ACTAGT 1 cut(s) 902
Sse9I AATT 9 cut(s) 282, 320, 561, 633, 641, 737, 1051, 1056, 1148
SsiI CCGC 3 cut(s) 8, 72, 823
SspDI GGCGCC 1 cut(s) 936
SspI AATATT 1 cut(s) 157
SspMI CTAG 1 cut(s) 903
StyD4I CCNGG 4 cut(s) 236, 294, 336, 1083
StyI CCWWGG 2 cut(s) 1000, 1243
TaaI ACNGT 4 cut(s) 395, 482, 1130, 1177
TaiI ACGT 2 cut(s) 889, 1257
TaqI TCGA 3 cut(s) 183, 451, 852
TasI AATT 9 cut(s) 282, 320, 561, 633, 641, 737, 1051, 1056, 1148
TatI WGTACW 2 cut(s) 732, 1345
TauI GCSGC 1 cut(s) 75
TfiI GAWTC 5 cut(s) 193, 272, 593, 650, 1248
Tru1I TTAA 6 cut(s) 465, 932, 1050, 1055, 1152, 1200
Tru9I TTAA 6 cut(s) 465, 932, 1050, 1055, 1152, 1200
TscAI CASTG 2 cut(s) 418, 1182
TseFI GTSAC 2 cut(s) 701, 882
TseI GCWGC 2 cut(s) 20, 512
Tsp45I GTSAC 2 cut(s) 701, 882
TspDTI ATGAA 6 cut(s) 285, 330, 581, 678, 847, 1158
TspGWI ACGGA 1 cut(s) 1330
TspRI CASTG 2 cut(s) 418, 1182
Tth111I GACNNNGTC 1 cut(s) 124
VneI GTGCAC 1 cut(s) 142
XapI RAATTY 4 cut(s) 320, 633, 737, 1148
XceI RCATGY 1 cut(s) 503
XcmI CCANNNNNNNNNTGG 1 cut(s) 1362
XmiI GTMKAC 1 cut(s) 852
XmnI GAANNNNTTC 1 cut(s) 952
XspI CTAG 1 cut(s) 903
Zsp2I ATGCAT 1 cut(s) 976
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.