Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0006054

Physical Location & Seq

Genomic Coordinates Reverse (-)

23940521 .. 23942171

Gene Structure 1651 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G203800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 993 bp

ATGTGCCTACTTCTACAACCAACCATGGCTGGTGGTAACTTGAAGAATGCAGTCGTAGCATTTCTGGCTCCCCTTCCCTCCATTATCTTCTACCTCATATTCCTCAGCAACAACCATCACCAAACAGATGGGATTCTCTCTCCTCTCTGGGCGTGGTGCTACCACCACCCTCTTCTCTTAGCCAATGCCCTCTTCTTCCTCAACGTCAATGTCCTCTTCTGGGTCATCAGCCAAGTTCTAAAAAGCCACTGGATGATCGATTTGTATTGGACTGTGATACCTGTAATGCTTGTTCATTACTATGGCTCTCACCCTCTGGCTGATTATAACTGGTGGCGCTCAACGATCGTAGTTTTGATGACTTGGGTTTGGAGCCTTAGGCTTTCCCACAACTACTTTAGGCGGGAAAATTGGCAATGGGGTGCAAGAGAGGACTGGAGGTTCACCGATATGAGCTCACAGTATGGGAAGCACTGGTGGTGGATTTCCTTCTTCGCCGTCTACCTCTCTCAGCAGGTTTTTCTGATTGGGGTATGCCTTCCAATGTATGTGATCCACTCAGTTAATGTGCCACTGAACATATGGGATATTATTGCCGTCATTGTCTGCATTTCTGGCATTGTTGTAGCATACTGTGCCGACACGCAGCTCCACGACTTTGTAAGCAGAAACAACAAGCTGAAAGAGCTTGGAAAGCCAGTTGTCCCCAATCTTGATGAGGGGTTGTGGCGTTATTCACGGCATCCCAACTACTTTGGAGAGCAGTTGTGGTGGTGGGGACTAGTTATATTTGCATGGAGCCTGGGACATGGATGGGCCTTTGTTGGATCTCTCATCAATACAATGTGTTTAGCTTATGTGACTACTCTTGTGGAACGGCGAATGCTGAAACAAGATTACAGAGCAGAAGCATACAGGCGATATCAGAAGACAACCTCTGTGTGGATACCTTGGTTCAAGTCATCCCCAGGAGGAAAAGATAAGAATGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006629 GO:0008150 GO:0008152 GO:0008202 GO:0016229 GO:0016491 GO:0044238 GO:0055114 GO:0071704 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1295

Protein Analysis

331

Amino Acids

38.89

Weight (kDa)

9.05

Isoelectric Point (pI)

33.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006054)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46890
fragaria_vesca	FvH4_7g18190 FvH4_7g18190 FvH4_7g18190
malus_domestica	MD07G1165100.v1.1
prunus_persica	Prupe.2G203800_v2.0.a1
pyrus_communis	pycom07g16020
rosa_chinensis	RchiOBHm_Chr1g0361831 RchiOBHm_Chr1g0361841
rosa_laevigata	RLG00000027699 RLG00000027700
rosa_multiflora	Rmu_ssc0000124.1_g000016 Rmu_ssc0000124.1_g000017 Rmu_ssc0000124.1_g000018
rosa_roxburghii	Rroxscaffold_4G00294660 Rroxscaffold_4G00294670
rosa_rugosa	Rorug01G0291500 Rorug01G0291600
rosa_samantha	Rh1AG302200 Rh1AG302400 Rh1BG265100 Rh1BG265200 Rh1CG283600 Rh1DG295100 Rh1DG295200
rosa_wichuraiana	Rw1G026780 Rw1G026790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	327
Acc36I	ACCTGC	1 cut(s)	505
AccI	GTMKAC	1 cut(s)	501
AciI	CCGC	1 cut(s)	403
AclWI	GGATC	2 cut(s)	547, 835
AfiI	CCNNNNNNNGG	2 cut(s)	220, 942
AgsI	TTSAA	2 cut(s)	43, 958
AhlI	ACTAGT	1 cut(s)	781
AjnI	CCWGG	2 cut(s)	801, 967
AjuI	GAANNNNNNNTTGG	2 cut(s)	176, 208
AloI	GAACNNNNNNTCC	2 cut(s)	425, 457
AluBI	AGCT	5 cut(s)	456, 649, 679, 688, 854
AluI	AGCT	5 cut(s)	456, 649, 679, 688, 854
Alw21I	GWGCWC	1 cut(s)	458
AlwI	GGATC	2 cut(s)	547, 835
AoxI	GGCC	1 cut(s)	816
ApeKI	GCWGC	1 cut(s)	646
AspLEI	GCGC	1 cut(s)	339
AspS9I	GGNCC	1 cut(s)	816
AsuHPI	GGTGA	3 cut(s)	110, 302, 436
AxyI	CCTNAGG	1 cut(s)	377
BaeI	ACNNNNGTAYC	2 cut(s)	938, 971
BanII	GRGCYC	1 cut(s)	458
BbsI	GAAGAC	1 cut(s)	935
Bbv12I	GWGCWC	1 cut(s)	458
BbvCI	CCTCAGC	1 cut(s)	104
BbvI	GCAGC	1 cut(s)	658
BccI	CCATC	3 cut(s)	122, 123, 807
BceAI	ACGGC	4 cut(s)	482, 581, 755, 893
BciT130I	CCWGG	2 cut(s)	803, 969
BciVI	GTATCC	1 cut(s)	939
BcuI	ACTAGT	1 cut(s)	781
BfaI	CTAG	1 cut(s)	782
BfoI	RGCGCY	1 cut(s)	340
BfuAI	ACCTGC	1 cut(s)	505
BfuI	GTATCC	1 cut(s)	939
BisI	GCNGC	1 cut(s)	647
BlsI	GCNGC	1 cut(s)	648
Bme1390I	CCNGG	2 cut(s)	803, 969
BmgT120I	GGNCC	1 cut(s)	816
BmiI	GGNNCC	3 cut(s)	69, 374, 800
BmrFI	CCNGG	2 cut(s)	803, 969
BmsI	GCATC	1 cut(s)	751
BpiI	GAAGAC	1 cut(s)	935
BpmI	CTGGAG	1 cut(s)	457
Bpu10I	CCTNAGC	1 cut(s)	104
Bsa29I	ATCGAT	1 cut(s)	258
BsaJI	CCNNGG	4 cut(s)	24, 802, 950, 967
Bsc4I	CCNNNNNNNGG	2 cut(s)	220, 942
Bse1I	ACTGG	5 cut(s)	254, 335, 440, 479, 698
Bse21I	CCTNAGG	1 cut(s)	377
Bse3DI	GCAATG	1 cut(s)	422
BseBI	CCWGG	2 cut(s)	803, 969
BseCI	ATCGAT	1 cut(s)	258
BseDI	CCNNGG	4 cut(s)	24, 802, 950, 967
BseGI	GGATG	4 cut(s)	258, 742, 818, 962
BseLI	CCNNNNNNNGG	2 cut(s)	220, 942
BseMI	GCAATG	1 cut(s)	422
BseMII	CTCAG	3 cut(s)	118, 524, 573
BseNI	ACTGG	5 cut(s)	254, 335, 440, 479, 698
BseRI	GAGGAG	1 cut(s)	132
BseXI	GCAGC	1 cut(s)	658
Bsh1285I	CGRYCG	1 cut(s)	348
BshFI	GGCC	1 cut(s)	818
BshVI	ATCGAT	1 cut(s)	258
BsiEI	CGRYCG	1 cut(s)	348
BsiHKAI	GWGCWC	1 cut(s)	458
BslFI	GGGAC	3 cut(s)	689, 792, 819
BslI	CCNNNNNNNGG	2 cut(s)	220, 942
BsmFI	GGGAC	3 cut(s)	689, 792, 819
BsmI	GAATGC	3 cut(s)	52, 888, 991
BsnI	GGCC	1 cut(s)	818
Bsp1286I	GDGCHC	1 cut(s)	458
Bsp143I	GATC	4 cut(s)	255, 345, 552, 827
Bsp19I	CCATGG	1 cut(s)	24
BspACI	CCGC	1 cut(s)	403
BspANI	GGCC	1 cut(s)	818
BspCNI	CTCAG	3 cut(s)	117, 523, 572
BspDI	ATCGAT	1 cut(s)	258
BspLI	GGNNCC	3 cut(s)	69, 374, 800
BspMI	ACCTGC	1 cut(s)	505
BspPI	GGATC	2 cut(s)	547, 835
BsrDI	GCAATG	1 cut(s)	422
BsrI	ACTGG	5 cut(s)	254, 335, 440, 479, 698
BssECI	CCNNGG	4 cut(s)	24, 802, 950, 967
BssMI	GATC	4 cut(s)	255, 345, 552, 827
BssT1I	CCWWGG	2 cut(s)	24, 950
Bst2UI	CCWGG	2 cut(s)	803, 969
Bst4CI	ACNGT	3 cut(s)	274, 462, 635
Bst6I	CTCTTC	3 cut(s)	177, 197, 221
BstAPI	GCANNNNNTGC	1 cut(s)	635
BstDEI	CTNAG	5 cut(s)	104, 178, 377, 510, 559
BstDSI	CCRYGG	1 cut(s)	24
BstF5I	GGATG	4 cut(s)	258, 742, 818, 962
BstH2I	RGCGCY	1 cut(s)	340
BstHHI	GCGC	1 cut(s)	339
BstKTI	GATC	4 cut(s)	258, 348, 555, 830
BstMBI	GATC	4 cut(s)	255, 345, 552, 827
BstMCI	CGRYCG	1 cut(s)	348
BstMWI	GCNNNNNNNGC	6 cut(s)	56, 65, 615, 635, 685, 694
BstNI	CCWGG	2 cut(s)	803, 969
BstSCI	CCNGG	2 cut(s)	801, 967
BstV1I	GCAGC	1 cut(s)	658
BstV2I	GAAGAC	1 cut(s)	935
BstX2I	RGATCY	1 cut(s)	827
BstXI	CCANNNNNNTGG	1 cut(s)	128
BstYI	RGATCY	1 cut(s)	827
Bsu15I	ATCGAT	1 cut(s)	258
Bsu36I	CCTNAGG	1 cut(s)	377
BsuI	GTATCC	1 cut(s)	939
BsuRI	GGCC	1 cut(s)	818
BsuTUI	ATCGAT	1 cut(s)	258
BtgI	CCRYGG	1 cut(s)	24
BtsCI	GGATG	4 cut(s)	258, 742, 818, 962
BtsIMutI	CAGTG	3 cut(s)	247, 472, 572
BveI	ACCTGC	1 cut(s)	505
CfoI	GCGC	1 cut(s)	339
Cfr13I	GGNCC	1 cut(s)	816
ClaI	ATCGAT	1 cut(s)	258
CviAII	CATG	3 cut(s)	25, 795, 809
DdeI	CTNAG	5 cut(s)	104, 178, 377, 510, 559
DpnI	GATC	4 cut(s)	257, 347, 554, 829
DpnII	GATC	4 cut(s)	255, 345, 552, 827
Eam1104I	CTCTTC	3 cut(s)	177, 197, 221
EarI	CTCTTC	3 cut(s)	177, 197, 221
Ecl136II	GAGCTC	1 cut(s)	456
Eco130I	CCWWGG	2 cut(s)	24, 950
Eco24I	GRGCYC	1 cut(s)	458
Eco32I	GATATC	1 cut(s)	923
Eco53kI	GAGCTC	1 cut(s)	456
Eco81I	CCTNAGG	1 cut(s)	377
EcoICRI	GAGCTC	1 cut(s)	456
EcoRII	CCWGG	2 cut(s)	801, 967
EcoRV	GATATC	1 cut(s)	923
EcoT14I	CCWWGG	2 cut(s)	24, 950
EcoT38I	GRGCYC	1 cut(s)	458
ErhI	CCWWGG	2 cut(s)	24, 950
FaeI	CATG	3 cut(s)	28, 798, 812
FaqI	GGGAC	3 cut(s)	689, 792, 819
FatI	CATG	3 cut(s)	24, 794, 808
FauI	CCCGC	1 cut(s)	396
FauNDI	CATATG	1 cut(s)	581
FblI	GTMKAC	1 cut(s)	501
Fnu4HI	GCNGC	1 cut(s)	647
FokI	GGATG	4 cut(s)	265, 729, 825, 949
FriOI	GRGCYC	1 cut(s)	458
Fsp4HI	GCNGC	1 cut(s)	647
FspBI	CTAG	1 cut(s)	782
GlaI	GCGC	1 cut(s)	338
GluI	GCNGC	1 cut(s)	647
GsuI	CTGGAG	1 cut(s)	457
HaeII	RGCGCY	1 cut(s)	340
HaeIII	GGCC	1 cut(s)	818
HhaI	GCGC	1 cut(s)	339
Hin1II	CATG	3 cut(s)	28, 798, 812
Hin6I	GCGC	1 cut(s)	337
HinP1I	GCGC	1 cut(s)	337
HinfI	GANTC	1 cut(s)	133
HphI	GGTGA	3 cut(s)	110, 302, 436
Hpy166II	GTNNAC	2 cut(s)	444, 502
Hpy188I	TCNGA	2 cut(s)	525, 927
Hpy188III	TCNNGA	1 cut(s)	713
Hpy8I	GTNNAC	2 cut(s)	444, 502
HpyAV	CCTTC	3 cut(s)	83, 499, 548
HpyCH4III	ACNGT	3 cut(s)	274, 462, 635
HpyCH4IV	ACGT	1 cut(s)	204
HpyCH4V	TGCA	4 cut(s)	50, 425, 609, 794
HpyF10VI	GCNNNNNNNGC	6 cut(s)	56, 65, 615, 635, 685, 694
HpyF3I	CTNAG	5 cut(s)	104, 178, 377, 510, 559
HpySE526I	ACGT	1 cut(s)	204
Hsp92II	CATG	3 cut(s)	28, 798, 812
HspAI	GCGC	1 cut(s)	337
Kzo9I	GATC	4 cut(s)	255, 345, 552, 827
LmnI	GCTCC	4 cut(s)	73, 372, 654, 798
Lsp1109I	GCAGC	1 cut(s)	658
LweI	GCATC	1 cut(s)	751
MaeI	CTAG	1 cut(s)	782
MaeII	ACGT	1 cut(s)	204
MaeIII	GTNAC	2 cut(s)	35, 859
MalI	GATC	4 cut(s)	257, 347, 554, 829
MboI	GATC	4 cut(s)	255, 345, 552, 827
MboII	GAAGA	8 cut(s)	55, 79, 164, 184, 187, 208, 484, 940
MflI	RGATCY	1 cut(s)	827
MhlI	GDGCHC	1 cut(s)	458
MluCI	AATT	1 cut(s)	409
MmeI	TCCRAC	1 cut(s)	805
MseI	TTAA	2 cut(s)	564, 991
MslI	CAYNNNNRTG	2 cut(s)	300, 449
MspR9I	CCNGG	2 cut(s)	803, 969
Mva1269I	GAATGC	3 cut(s)	52, 888, 991
MvaI	CCWGG	2 cut(s)	803, 969
MwoI	GCNNNNNNNGC	6 cut(s)	56, 65, 615, 635, 685, 694
NcoI	CCATGG	1 cut(s)	24
NdeI	CATATG	1 cut(s)	581
NdeII	GATC	4 cut(s)	255, 345, 552, 827
NlaIII	CATG	3 cut(s)	28, 798, 812
NlaIV	GGNNCC	3 cut(s)	69, 374, 800
NmuCI	GTSAC	1 cut(s)	859
PctI	GAATGC	3 cut(s)	52, 888, 991
PfeI	GAWTC	1 cut(s)	133
PkrI	GCNGC	1 cut(s)	648
Ple19I	CGATCG	1 cut(s)	348
PsiI	TTATAA	1 cut(s)	327
Psp124BI	GAGCTC	1 cut(s)	458
Psp6I	CCWGG	2 cut(s)	801, 967
PspGI	CCWGG	2 cut(s)	801, 967
PspN4I	GGNNCC	3 cut(s)	69, 374, 800
PspPI	GGNCC	1 cut(s)	816
PsrI	GAACNNNNNNTAC	2 cut(s)	276, 308
PsuI	RGATCY	1 cut(s)	827
PvuI	CGATCG	1 cut(s)	348
RseI	CAYNNNNRTG	2 cut(s)	300, 449
SacI	GAGCTC	1 cut(s)	458
SaqAI	TTAA	2 cut(s)	564, 991
SatI	GCNGC	1 cut(s)	647
Sau3AI	GATC	4 cut(s)	255, 345, 552, 827
Sau96I	GGNCC	1 cut(s)	816
ScrFI	CCNGG	2 cut(s)	803, 969
SduI	GDGCHC	1 cut(s)	458
SfaNI	GCATC	1 cut(s)	751
SmiMI	CAYNNNNRTG	2 cut(s)	300, 449
SpeI	ACTAGT	1 cut(s)	781
Sse9I	AATT	1 cut(s)	409
SsiI	CCGC	1 cut(s)	403
SspMI	CTAG	1 cut(s)	782
SstI	GAGCTC	1 cut(s)	458
StyD4I	CCNGG	2 cut(s)	801, 967
StyI	CCWWGG	2 cut(s)	24, 950
TaaI	ACNGT	3 cut(s)	274, 462, 635
TaiI	ACGT	1 cut(s)	207
TaqI	TCGA	1 cut(s)	258
TasI	AATT	1 cut(s)	409
TfiI	GAWTC	1 cut(s)	133
Tru1I	TTAA	2 cut(s)	564, 991
Tru9I	TTAA	2 cut(s)	564, 991
TscAI	CASTG	3 cut(s)	254, 479, 579
TseFI	GTSAC	1 cut(s)	859
TseI	GCWGC	1 cut(s)	646
Tsp45I	GTSAC	1 cut(s)	859
TspDTI	ATGAA	1 cut(s)	284
TspRI	CASTG	3 cut(s)	254, 479, 579
XcmI	CCANNNNNNNNNTGG	1 cut(s)	579
XmiI	GTMKAC	1 cut(s)	501
XspI	CTAG	1 cut(s)	782

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.