Pectate lyase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G54920 AT5G04310 AT5G04310 AT5G04310 |
| fragaria_vesca | FvH4_7g18400 FvH4_7g18400 FvH4_7g18400 FvH4_7g18400 FvH4_7g18400 |
| malus_domestica | MD01G1100600.v1.1 |
| prunus_persica | Prupe.2G206100_v2.0.a1 Prupe.2G206100_v2.0.a1 |
| pyrus_communis | pycom01g12750 pycom07g16230 |
| rosa_chinensis | RchiOBHm_Chr1g0362211 |
| rosa_laevigata | RLG00000027666 |
| rosa_multiflora | Rmu_co8314571.1_g000001 Rmu_sc0001237.1_g000010 |
| rosa_roxburghii | Rroxscaffold_4G00294430 |
| rosa_rugosa | Rorug01G0295600 Rorug01G0295700 Rorug01G0295800.1 |
| rosa_samantha | Rh1AG305100 Rh1BG267900 Rh1CG286100 Rh1DG297900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 119, 931 |
| Acc36I | ACCTGC | 2 cut(s) | 119, 931 |
| AccB1I | GGYRCC | 1 cut(s) | 1397 |
| AccII | CGCG | 4 cut(s) | 689, 1005, 1146, 1217 |
| AclWI | GGATC | 4 cut(s) | 487, 521, 794, 860 |
| AcoI | YGGCCR | 2 cut(s) | 388, 586 |
| AcuI | CTGAAG | 1 cut(s) | 225 |
| AcvI | CACGTG | 1 cut(s) | 1018 |
| AcyI | GRCGYC | 3 cut(s) | 256, 396, 831 |
| AdeI | CACNNNGTG | 2 cut(s) | 490, 1041 |
| AfaI | GTAC | 7 cut(s) | 225, 638, 920, 1010, 1103, 1348, 1535 |
| AfeI | AGCGCT | 1 cut(s) | 1069 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 469, 470, 726, 840, 889, 932 |
| AflIII | ACRYGT | 1 cut(s) | 1015 |
| AgsI | TTSAA | 5 cut(s) | 93, 574, 598, 958, 1494 |
| AjiI | CACGTC | 2 cut(s) | 670, 724 |
| AjnI | CCWGG | 3 cut(s) | 1089, 1113, 1337 |
| AleI | CACNNNNGTG | 1 cut(s) | 966 |
| AluBI | AGCT | 8 cut(s) | 138, 209, 364, 544, 556, 570, 870, 1479 |
| AluI | AGCT | 8 cut(s) | 138, 209, 364, 544, 556, 570, 870, 1479 |
| Alw21I | GWGCWC | 5 cut(s) | 140, 558, 1250, 1471, 1561 |
| Alw26I | GTCTC | 3 cut(s) | 646, 1431, 1515 |
| AlwI | GGATC | 4 cut(s) | 487, 521, 794, 860 |
| Ama87I | CYCGRG | 2 cut(s) | 469, 931 |
| Aor51HI | AGCGCT | 1 cut(s) | 1069 |
| AoxI | GGCC | 7 cut(s) | 52, 345, 388, 415, 586, 820, 1263 |
| ApeKI | GCWGC | 4 cut(s) | 26, 330, 621, 982 |
| AspLEI | GCGC | 7 cut(s) | 330, 773, 976, 1005, 1070, 1146, 1217 |
| AspS9I | GGNCC | 9 cut(s) | 53, 345, 451, 843, 1117, 1170, 1263, 1383, 1419 |
| AsuC2I | CCSGG | 4 cut(s) | 470, 471, 590, 1365 |
| AvaI | CYCGRG | 2 cut(s) | 469, 931 |
| AvaII | GGWCC | 6 cut(s) | 451, 843, 1117, 1170, 1383, 1419 |
| AxyI | CCTNAGG | 1 cut(s) | 1231 |
| BaeGI | GKGCMC | 2 cut(s) | 476, 1230 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1338, 1371 |
| BanI | GGYRCC | 1 cut(s) | 1397 |
| BanII | GRGCYC | 4 cut(s) | 140, 507, 558, 1281 |
| BbrPI | CACGTG | 1 cut(s) | 1018 |
| BbsI | GAAGAC | 1 cut(s) | 156 |
| Bbv12I | GWGCWC | 5 cut(s) | 140, 558, 1250, 1471, 1561 |
| BbvI | GCAGC | 4 cut(s) | 38, 317, 608, 994 |
| BccI | CCATC | 5 cut(s) | 545, 866, 1388, 1394, 1550 |
| BceAI | ACGGC | 6 cut(s) | 473, 601, 763, 769, 835, 1390 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 295, 329, 367, 401 |
| BciT130I | CCWGG | 3 cut(s) | 1091, 1115, 1339 |
| BcnI | CCSGG | 4 cut(s) | 470, 471, 590, 1365 |
| BcoDI | GTCTC | 3 cut(s) | 646, 1431, 1515 |
| BfoI | RGCGCY | 4 cut(s) | 331, 774, 977, 1071 |
| BfuAI | ACCTGC | 2 cut(s) | 119, 931 |
| BglII | AGATCT | 1 cut(s) | 420 |
| BisI | GCNGC | 8 cut(s) | 27, 331, 376, 616, 619, 622, 983, 1426 |
| BlsI | GCNGC | 8 cut(s) | 28, 332, 377, 617, 620, 623, 984, 1427 |
| BmcAI | AGTACT | 1 cut(s) | 920 |
| Bme1390I | CCNGG | 7 cut(s) | 470, 471, 590, 1091, 1115, 1339, 1365 |
| Bme18I | GGWCC | 6 cut(s) | 451, 843, 1117, 1170, 1383, 1419 |
| BmeT110I | CYCGRG | 2 cut(s) | 469, 931 |
| BmgBI | CACGTC | 2 cut(s) | 670, 724 |
| BmgT120I | GGNCC | 9 cut(s) | 53, 345, 451, 843, 1117, 1170, 1263, 1383, 1419 |
| BmiI | GGNNCC | 7 cut(s) | 452, 453, 504, 844, 1384, 1399, 1420 |
| BmrFI | CCNGG | 7 cut(s) | 470, 471, 590, 1091, 1115, 1339, 1365 |
| BmrI | ACTGGG | 2 cut(s) | 352, 458 |
| BmsI | GCATC | 4 cut(s) | 87, 251, 765, 885 |
| BmuI | ACTGGG | 2 cut(s) | 352, 458 |
| BpiI | GAAGAC | 1 cut(s) | 156 |
| BpmI | CTGGAG | 2 cut(s) | 617, 694 |
| BpuEI | CTTGAG | 3 cut(s) | 154, 201, 1252 |
| BpuMI | CCSGG | 4 cut(s) | 470, 471, 590, 1365 |
| BsaAI | YACGTR | 1 cut(s) | 1018 |
| BsaBI | GATNNNNATC | 2 cut(s) | 425, 857 |
| BsaHI | GRCGYC | 3 cut(s) | 256, 396, 831 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 692, 722, 743, 773 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 469, 470, 726, 840, 889, 932 |
| Bse118I | RCCGGY | 3 cut(s) | 611, 1302, 1319 |
| Bse1I | ACTGG | 4 cut(s) | 347, 464, 634, 1181 |
| Bse21I | CCTNAGG | 1 cut(s) | 1231 |
| Bse3DI | GCAATG | 1 cut(s) | 793 |
| Bse8I | GATNNNNATC | 2 cut(s) | 425, 857 |
| BseBI | CCWGG | 3 cut(s) | 1091, 1115, 1339 |
| BseGI | GGATG | 3 cut(s) | 80, 102, 663 |
| BseJI | GATNNNNATC | 2 cut(s) | 425, 857 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 469, 470, 726, 840, 889, 932 |
| BseMI | GCAATG | 1 cut(s) | 793 |
| BseMII | CTCAG | 3 cut(s) | 1245, 1265, 1266 |
| BseNI | ACTGG | 4 cut(s) | 347, 464, 634, 1181 |
| BseRI | GAGGAG | 1 cut(s) | 1471 |
| BseSI | GKGCMC | 2 cut(s) | 476, 1230 |
| BseX3I | CGGCCG | 1 cut(s) | 586 |
| BseXI | GCAGC | 4 cut(s) | 38, 317, 608, 994 |
| BseYI | CCCAGC | 1 cut(s) | 454 |
| BsgI | GTGCAG | 2 cut(s) | 1001, 1018 |
| Bsh1236I | CGCG | 4 cut(s) | 689, 1005, 1146, 1217 |
| Bsh1285I | CGRYCG | 3 cut(s) | 448, 589, 1303 |
| BshFI | GGCC | 7 cut(s) | 54, 347, 390, 417, 588, 822, 1265 |
| BshNI | GGYRCC | 1 cut(s) | 1397 |
| BsiEI | CGRYCG | 3 cut(s) | 448, 589, 1303 |
| BsiHKAI | GWGCWC | 5 cut(s) | 140, 558, 1250, 1471, 1561 |
| BsiHKCI | CYCGRG | 2 cut(s) | 469, 931 |
| BsiSI | CCGG | 7 cut(s) | 470, 589, 612, 926, 1303, 1320, 1365 |
| BslFI | GGGAC | 6 cut(s) | 253, 452, 464, 918, 1211, 1396 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 469, 470, 726, 840, 889, 932 |
| BsmAI | GTCTC | 3 cut(s) | 646, 1431, 1515 |
| BsmBI | CGTCTC | 1 cut(s) | 646 |
| BsmFI | GGGAC | 6 cut(s) | 253, 452, 464, 918, 1211, 1396 |
| BsmI | GAATGC | 2 cut(s) | 114, 942 |
| BsnI | GGCC | 7 cut(s) | 54, 347, 390, 417, 588, 822, 1265 |
| BsoBI | CYCGRG | 2 cut(s) | 469, 931 |
| Bsp1286I | GDGCHC | 9 cut(s) | 140, 476, 507, 558, 1230, 1250, 1281, 1471, 1561 |
| Bsp143I | GATC | 7 cut(s) | 420, 445, 492, 513, 786, 825, 852 |
| Bsp19I | CCATGG | 2 cut(s) | 399, 1549 |
| BspANI | GGCC | 7 cut(s) | 54, 347, 390, 417, 588, 822, 1265 |
| BspCNI | CTCAG | 3 cut(s) | 1244, 1264, 1267 |
| BspFNI | CGCG | 4 cut(s) | 689, 1005, 1146, 1217 |
| BspLI | GGNNCC | 7 cut(s) | 452, 453, 504, 844, 1384, 1399, 1420 |
| BspMI | ACCTGC | 2 cut(s) | 119, 931 |
| BspPI | GGATC | 4 cut(s) | 487, 521, 794, 860 |
| BspT107I | GGYRCC | 1 cut(s) | 1397 |
| BsrDI | GCAATG | 1 cut(s) | 793 |
| BsrFI | RCCGGY | 3 cut(s) | 611, 1302, 1319 |
| BsrI | ACTGG | 4 cut(s) | 347, 464, 634, 1181 |
| BssAI | RCCGGY | 3 cut(s) | 611, 1302, 1319 |
| BssMI | GATC | 7 cut(s) | 420, 445, 492, 513, 786, 825, 852 |
| BssNI | GRCGYC | 3 cut(s) | 256, 396, 831 |
| BssT1I | CCWWGG | 3 cut(s) | 399, 1128, 1549 |
| Bst2UI | CCWGG | 3 cut(s) | 1091, 1115, 1339 |
| Bst4CI | ACNGT | 2 cut(s) | 812, 1466 |
| Bst6I | CTCTTC | 1 cut(s) | 1518 |
| BstACI | GRCGYC | 3 cut(s) | 256, 396, 831 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 988 |
| BstBAI | YACGTR | 1 cut(s) | 1018 |
| BstC8I | GCNNGC | 7 cut(s) | 326, 366, 476, 554, 775, 800, 1001 |
| BstDEI | CTNAG | 3 cut(s) | 1231, 1251, 1275 |
| BstDSI | CCRYGG | 3 cut(s) | 399, 687, 1549 |
| BstEII | GGTNACC | 1 cut(s) | 1331 |
| BstF5I | GGATG | 3 cut(s) | 80, 102, 663 |
| BstFNI | CGCG | 4 cut(s) | 689, 1005, 1146, 1217 |
| BstH2I | RGCGCY | 4 cut(s) | 331, 774, 977, 1071 |
| BstHHI | GCGC | 7 cut(s) | 330, 773, 976, 1005, 1070, 1146, 1217 |
| BstKTI | GATC | 7 cut(s) | 423, 448, 495, 516, 789, 828, 855 |
| BstMAI | GTCTC | 3 cut(s) | 646, 1431, 1515 |
| BstMBI | GATC | 7 cut(s) | 420, 445, 492, 513, 786, 825, 852 |
| BstMCI | CGRYCG | 3 cut(s) | 448, 589, 1303 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 135, 330, 414, 480, 621, 982, 988, 1350 |
| BstNI | CCWGG | 3 cut(s) | 1091, 1115, 1339 |
| BstPI | GGTNACC | 1 cut(s) | 1331 |
| BstSCI | CCNGG | 7 cut(s) | 468, 469, 588, 1089, 1113, 1337, 1363 |
| BstSLI | GKGCMC | 2 cut(s) | 476, 1230 |
| BstUI | CGCG | 4 cut(s) | 689, 1005, 1146, 1217 |
| BstV1I | GCAGC | 4 cut(s) | 38, 317, 608, 994 |
| BstV2I | GAAGAC | 1 cut(s) | 156 |
| BstX2I | RGATCY | 1 cut(s) | 420 |
| BstYI | RGATCY | 1 cut(s) | 420 |
| BstZI | CGGCCG | 1 cut(s) | 586 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1231 |
| BsuRI | GGCC | 7 cut(s) | 54, 347, 390, 417, 588, 822, 1265 |
| BtgI | CCRYGG | 3 cut(s) | 399, 687, 1549 |
| BtrI | CACGTC | 2 cut(s) | 670, 724 |
| BtsCI | GGATG | 3 cut(s) | 80, 102, 663 |
| BtsI | GCAGTG | 3 cut(s) | 676, 1046, 1104 |
| BtsIMutI | CAGTG | 4 cut(s) | 676, 1046, 1104, 1272 |
| BveI | ACCTGC | 2 cut(s) | 119, 931 |
| Cac8I | GCNNGC | 7 cut(s) | 326, 366, 476, 554, 775, 800, 1001 |
| CfoI | GCGC | 7 cut(s) | 330, 773, 976, 1005, 1070, 1146, 1217 |
| Cfr10I | RCCGGY | 3 cut(s) | 611, 1302, 1319 |
| Cfr13I | GGNCC | 9 cut(s) | 53, 345, 451, 843, 1117, 1170, 1263, 1383, 1419 |
| Cfr42I | CCGCGG | 1 cut(s) | 690 |
| Cfr9I | CCCGGG | 1 cut(s) | 469 |
| CseI | GACGC | 4 cut(s) | 150, 264, 404, 839 |
| Csp6I | GTAC | 7 cut(s) | 224, 637, 919, 1009, 1102, 1347, 1534 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1534, 1569 |
| CviAII | CATG | 4 cut(s) | 400, 532, 605, 1550 |
| CviQI | GTAC | 7 cut(s) | 224, 637, 919, 1009, 1102, 1347, 1534 |
| DdeI | CTNAG | 3 cut(s) | 1231, 1251, 1275 |
| DpnI | GATC | 7 cut(s) | 422, 447, 494, 515, 788, 827, 854 |
| DpnII | GATC | 7 cut(s) | 420, 445, 492, 513, 786, 825, 852 |
| DraIII | CACNNNGTG | 2 cut(s) | 490, 1041 |
| EaeI | YGGCCR | 2 cut(s) | 388, 586 |
| EagI | CGGCCG | 1 cut(s) | 586 |
| Eam1104I | CTCTTC | 1 cut(s) | 1518 |
| EarI | CTCTTC | 1 cut(s) | 1518 |
| EciI | GGCGGA | 2 cut(s) | 470, 514 |
| Ecl136II | GAGCTC | 2 cut(s) | 138, 556 |
| EclXI | CGGCCG | 1 cut(s) | 586 |
| Eco130I | CCWWGG | 3 cut(s) | 399, 1128, 1549 |
| Eco24I | GRGCYC | 4 cut(s) | 140, 507, 558, 1281 |
| Eco47I | GGWCC | 6 cut(s) | 451, 843, 1117, 1170, 1383, 1419 |
| Eco47III | AGCGCT | 1 cut(s) | 1069 |
| Eco52I | CGGCCG | 1 cut(s) | 586 |
| Eco53kI | GAGCTC | 2 cut(s) | 138, 556 |
| Eco57I | CTGAAG | 1 cut(s) | 225 |
| Eco72I | CACGTG | 1 cut(s) | 1018 |
| Eco81I | CCTNAGG | 1 cut(s) | 1231 |
| Eco88I | CYCGRG | 2 cut(s) | 469, 931 |
| Eco91I | GGTNACC | 1 cut(s) | 1331 |
| EcoICRI | GAGCTC | 2 cut(s) | 138, 556 |
| EcoO109I | RGGNCCY | 2 cut(s) | 451, 1263 |
| EcoO65I | GGTNACC | 1 cut(s) | 1331 |
| EcoRII | CCWGG | 3 cut(s) | 1089, 1113, 1337 |
| EcoT14I | CCWWGG | 3 cut(s) | 399, 1128, 1549 |
| EcoT22I | ATGCAT | 1 cut(s) | 244 |
| EcoT38I | GRGCYC | 4 cut(s) | 140, 507, 558, 1281 |
| ErhI | CCWWGG | 3 cut(s) | 399, 1128, 1549 |
| Esp3I | CGTCTC | 1 cut(s) | 646 |
| FaeI | CATG | 4 cut(s) | 403, 535, 608, 1553 |
| FaqI | GGGAC | 6 cut(s) | 253, 452, 464, 918, 1211, 1396 |
| FatI | CATG | 4 cut(s) | 399, 531, 604, 1549 |
| FauI | CCCGC | 3 cut(s) | 682, 694, 998 |
| Fnu4HI | GCNGC | 8 cut(s) | 27, 331, 376, 616, 619, 622, 983, 1426 |
| FokI | GGATG | 3 cut(s) | 67, 109, 650 |
| FriOI | GRGCYC | 4 cut(s) | 140, 507, 558, 1281 |
| Fsp4HI | GCNGC | 8 cut(s) | 27, 331, 376, 616, 619, 622, 983, 1426 |
| GlaI | GCGC | 7 cut(s) | 329, 772, 975, 1004, 1069, 1145, 1216 |
| GluI | GCNGC | 8 cut(s) | 27, 331, 376, 616, 619, 622, 983, 1426 |
| GsaI | CCCAGC | 1 cut(s) | 458 |
| GsuI | CTGGAG | 2 cut(s) | 617, 694 |
| HaeII | RGCGCY | 4 cut(s) | 331, 774, 977, 1071 |
| HaeIII | GGCC | 7 cut(s) | 54, 347, 390, 417, 588, 822, 1265 |
| HapII | CCGG | 7 cut(s) | 470, 589, 612, 926, 1303, 1320, 1365 |
| HgaI | GACGC | 4 cut(s) | 150, 264, 404, 839 |
| HhaI | GCGC | 7 cut(s) | 330, 773, 976, 1005, 1070, 1146, 1217 |
| Hin1I | GRCGYC | 3 cut(s) | 256, 396, 831 |
| Hin1II | CATG | 4 cut(s) | 403, 535, 608, 1553 |
| Hin6I | GCGC | 7 cut(s) | 328, 771, 974, 1003, 1068, 1144, 1215 |
| HinP1I | GCGC | 7 cut(s) | 328, 771, 974, 1003, 1068, 1144, 1215 |
| HincII | GTYRAC | 2 cut(s) | 565, 1024 |
| HindII | GTYRAC | 2 cut(s) | 565, 1024 |
| HinfI | GANTC | 5 cut(s) | 234, 335, 437, 929, 1096 |
| HpaI | GTTAAC | 1 cut(s) | 1024 |
| HpaII | CCGG | 7 cut(s) | 470, 589, 612, 926, 1303, 1320, 1365 |
| Hpy166II | GTNNAC | 6 cut(s) | 565, 673, 846, 1024, 1104, 1150 |
| Hpy188I | TCNGA | 3 cut(s) | 445, 745, 1174 |
| Hpy8I | GTNNAC | 6 cut(s) | 565, 673, 846, 1024, 1104, 1150 |
| Hpy99I | CGWCG | 8 cut(s) | 320, 707, 728, 755, 821, 833, 890, 914 |
| HpyAV | CCTTC | 1 cut(s) | 1409 |
| HpyCH4III | ACNGT | 2 cut(s) | 812, 1466 |
| HpyCH4IV | ACGT | 7 cut(s) | 600, 639, 669, 702, 723, 1017, 1536 |
| HpyCH4V | TGCA | 8 cut(s) | 4, 114, 242, 624, 681, 940, 982, 999 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 135, 330, 414, 480, 621, 982, 988, 1350 |
| HpyF3I | CTNAG | 3 cut(s) | 1231, 1251, 1275 |
| HpySE526I | ACGT | 7 cut(s) | 600, 639, 669, 702, 723, 1017, 1536 |
| Hsp92I | GRCGYC | 3 cut(s) | 256, 396, 831 |
| Hsp92II | CATG | 4 cut(s) | 403, 535, 608, 1553 |
| HspAI | GCGC | 7 cut(s) | 328, 771, 974, 1003, 1068, 1144, 1215 |
| KflI | GGGWCCC | 1 cut(s) | 451 |
| KspAI | GTTAAC | 1 cut(s) | 1024 |
| KspI | CCGCGG | 1 cut(s) | 690 |
| Kzo9I | GATC | 7 cut(s) | 420, 445, 492, 513, 786, 825, 852 |
| LmnI | GCTCC | 7 cut(s) | 483, 502, 1114, 1235, 1341, 1474, 1484 |
| Lsp1109I | GCAGC | 4 cut(s) | 38, 317, 608, 994 |
| LweI | GCATC | 4 cut(s) | 87, 251, 765, 885 |
| MaeII | ACGT | 7 cut(s) | 600, 639, 669, 702, 723, 1017, 1536 |
| MaeIII | GTNAC | 8 cut(s) | 430, 607, 692, 943, 1135, 1331, 1430, 1537 |
| MalI | GATC | 7 cut(s) | 422, 447, 494, 515, 788, 827, 854 |
| MboI | GATC | 7 cut(s) | 420, 445, 492, 513, 786, 825, 852 |
| MboII | GAAGA | 4 cut(s) | 156, 511, 1482, 1505 |
| MflI | RGATCY | 1 cut(s) | 420 |
| MhlI | GDGCHC | 9 cut(s) | 140, 476, 507, 558, 1230, 1250, 1281, 1471, 1561 |
| MluCI | AATT | 2 cut(s) | 1180, 1518 |
| MlyI | GAGTC | 4 cut(s) | 243, 329, 431, 923 |
| MmeI | TCCRAC | 2 cut(s) | 669, 1197 |
| Mph1103I | ATGCAT | 1 cut(s) | 244 |
| MseI | TTAA | 4 cut(s) | 122, 1023, 1083, 1583 |
| MslI | CAYNNNNRTG | 3 cut(s) | 966, 1016, 1554 |
| MspA1I | CMGCKG | 2 cut(s) | 689, 1425 |
| MspI | CCGG | 7 cut(s) | 470, 589, 612, 926, 1303, 1320, 1365 |
| MspR9I | CCNGG | 7 cut(s) | 470, 471, 590, 1091, 1115, 1339, 1365 |
| Mva1269I | GAATGC | 2 cut(s) | 114, 942 |
| MvaI | CCWGG | 3 cut(s) | 1091, 1115, 1339 |
| MvnI | CGCG | 4 cut(s) | 689, 1005, 1146, 1217 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 135, 330, 414, 480, 621, 982, 988, 1350 |
| NciI | CCSGG | 4 cut(s) | 470, 471, 590, 1365 |
| NcoI | CCATGG | 2 cut(s) | 399, 1549 |
| NdeII | GATC | 7 cut(s) | 420, 445, 492, 513, 786, 825, 852 |
| NlaIII | CATG | 4 cut(s) | 403, 535, 608, 1553 |
| NlaIV | GGNNCC | 7 cut(s) | 452, 453, 504, 844, 1384, 1399, 1420 |
| NmuCI | GTSAC | 5 cut(s) | 430, 607, 943, 1331, 1430 |
| NsiI | ATGCAT | 1 cut(s) | 244 |
| OliI | CACNNNNGTG | 1 cut(s) | 966 |
| PaqCI | CACCTGC | 2 cut(s) | 119, 931 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 825 |
| PctI | GAATGC | 2 cut(s) | 114, 942 |
| PfeI | GAWTC | 1 cut(s) | 1096 |
| PkrI | GCNGC | 8 cut(s) | 28, 332, 377, 617, 620, 623, 984, 1427 |
| Ple19I | CGATCG | 1 cut(s) | 448 |
| PleI | GAGTC | 4 cut(s) | 242, 329, 431, 923 |
| PmaCI | CACGTG | 1 cut(s) | 1018 |
| PmlI | CACGTG | 1 cut(s) | 1018 |
| PpsI | GAGTC | 4 cut(s) | 242, 329, 431, 923 |
| Ppu21I | YACGTR | 1 cut(s) | 1018 |
| PpuMI | RGGWCCY | 1 cut(s) | 451 |
| Psp124BI | GAGCTC | 2 cut(s) | 140, 558 |
| Psp5II | RGGWCCY | 1 cut(s) | 451 |
| Psp6I | CCWGG | 3 cut(s) | 1089, 1113, 1337 |
| PspCI | CACGTG | 1 cut(s) | 1018 |
| PspEI | GGTNACC | 1 cut(s) | 1331 |
| PspFI | CCCAGC | 1 cut(s) | 454 |
| PspGI | CCWGG | 3 cut(s) | 1089, 1113, 1337 |
| PspN4I | GGNNCC | 7 cut(s) | 452, 453, 504, 844, 1384, 1399, 1420 |
| PspPI | GGNCC | 9 cut(s) | 53, 345, 451, 843, 1117, 1170, 1263, 1383, 1419 |
| PspPPI | RGGWCCY | 1 cut(s) | 451 |
| PsuI | RGATCY | 1 cut(s) | 420 |
| PvuI | CGATCG | 1 cut(s) | 448 |
| RsaI | GTAC | 7 cut(s) | 225, 638, 920, 1010, 1103, 1348, 1535 |
| RsaNI | GTAC | 7 cut(s) | 224, 637, 919, 1009, 1102, 1347, 1534 |
| RseI | CAYNNNNRTG | 3 cut(s) | 966, 1016, 1554 |
| SacI | GAGCTC | 2 cut(s) | 140, 558 |
| SacII | CCGCGG | 1 cut(s) | 690 |
| SaqAI | TTAA | 4 cut(s) | 122, 1023, 1083, 1583 |
| SatI | GCNGC | 8 cut(s) | 27, 331, 376, 616, 619, 622, 983, 1426 |
| Sau3AI | GATC | 7 cut(s) | 420, 445, 492, 513, 786, 825, 852 |
| Sau96I | GGNCC | 9 cut(s) | 53, 345, 451, 843, 1117, 1170, 1263, 1383, 1419 |
| ScaI | AGTACT | 1 cut(s) | 920 |
| SchI | GAGTC | 4 cut(s) | 243, 329, 431, 923 |
| ScrFI | CCNGG | 7 cut(s) | 470, 471, 590, 1091, 1115, 1339, 1365 |
| SduI | GDGCHC | 9 cut(s) | 140, 476, 507, 558, 1230, 1250, 1281, 1471, 1561 |
| SfaNI | GCATC | 4 cut(s) | 87, 251, 765, 885 |
| Sfr303I | CCGCGG | 1 cut(s) | 690 |
| SgrAI | CRCCGGYG | 2 cut(s) | 611, 1319 |
| SgrBI | CCGCGG | 1 cut(s) | 690 |
| SinI | GGWCC | 6 cut(s) | 451, 843, 1117, 1170, 1383, 1419 |
| SmaI | CCCGGG | 1 cut(s) | 471 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 966, 1016, 1554 |
| SmlI | CTYRAG | 3 cut(s) | 133, 216, 1267 |
| SmoI | CTYRAG | 3 cut(s) | 133, 216, 1267 |
| Sse9I | AATT | 2 cut(s) | 1180, 1518 |
| SspI | AATATT | 1 cut(s) | 1503 |
| SstI | GAGCTC | 2 cut(s) | 140, 558 |
| StyD4I | CCNGG | 7 cut(s) | 468, 469, 588, 1089, 1113, 1337, 1363 |
| StyI | CCWWGG | 3 cut(s) | 399, 1128, 1549 |
| TaaI | ACNGT | 2 cut(s) | 812, 1466 |
| TaiI | ACGT | 7 cut(s) | 603, 642, 672, 705, 726, 1020, 1539 |
| TaqI | TCGA | 7 cut(s) | 273, 315, 338, 789, 828, 863, 1299 |
| TasI | AATT | 2 cut(s) | 1180, 1518 |
| TatI | WGTACW | 2 cut(s) | 223, 918 |
| TauI | GCSGC | 4 cut(s) | 378, 618, 621, 1428 |
| TfiI | GAWTC | 1 cut(s) | 1096 |
| Tru1I | TTAA | 4 cut(s) | 122, 1023, 1083, 1583 |
| Tru9I | TTAA | 4 cut(s) | 122, 1023, 1083, 1583 |
| TscAI | CASTG | 4 cut(s) | 683, 1046, 1111, 1279 |
| TseFI | GTSAC | 5 cut(s) | 430, 607, 943, 1331, 1430 |
| TseI | GCWGC | 4 cut(s) | 26, 330, 621, 982 |
| Tsp45I | GTSAC | 5 cut(s) | 430, 607, 943, 1331, 1430 |
| TspDTI | ATGAA | 1 cut(s) | 69 |
| TspGWI | ACGGA | 3 cut(s) | 515, 1205, 1449 |
| TspMI | CCCGGG | 1 cut(s) | 469 |
| TspRI | CASTG | 4 cut(s) | 683, 1046, 1111, 1279 |
| VpaK11BI | GGWCC | 6 cut(s) | 451, 843, 1117, 1170, 1383, 1419 |
| XmaI | CCCGGG | 1 cut(s) | 469 |
| ZrmI | AGTACT | 1 cut(s) | 920 |
| Zsp2I | ATGCAT | 1 cut(s) | 244 |