Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0006501

Physical Location & Seq

Genomic Coordinates Forward (+)

55755006 .. 55760614

Gene Structure 5609 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG286100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1161 bp

ATGCTGTCCCTCAAGGACCAGCAATGCGCCGTCGGCAACCCCATCGACGACTGCTGGCGCTGCGGCTCCAACTGGGCCGACAACCGCCAGAAGCTCGCCGACTGCGGCATCGGCTTCGGCCAAGACGCCATGGGTGGCAAAGGCGGCCAGATCTACGTCGTCACCGACTCCTCCGACCGCGACCCCGCCAACCCAACTCCGGGCACTCTCCGCCACGCCGTGATCCAAACCGAGCCCCTCTGGATCATCTTCTCCGCCGACATGACCATCAAGCTCAAAGTCGAGCTCATCGTCAACAGCTTCAAGACCATCGACGGCCGCGGCGTCAGCGTCCACGTCACCGGCGGCGGATGCATAACCCTCCAGTACGTCTCCAACGTCATCATCCACAACATTCACGTCCACCACTGCAAGCCGGCCGGCAACACCAACGTCGCCTCCAGCCCCACCCACGTCGGCTGGCGCGGGAAGTCCGACGGCGACGGCATCTCCCTCTTCAGCGCCCGCAAAATTTGGATCGACCACTGCTCCCTGTCCTACTGCGCCGACGGACTCATCGACGCCATAATGGGGTCCACCGGAATCACTATTTCCAACAACCACTTTGCGCACCACGACGAGGTGATGCTTCTCGGCCACGACGATAAGTACTCGCCGGACACCGGGATGCAGGTGACGATTGCGTTCAACCACTTCGGGGAGGCGCTGGTGCAGCGTATGCCTCGGTGCAGACGCGGGTATATTCACGTGGTGAACAATGACTTCACGCAGTGGGAGATGTACGCCATCGGCGGCAGCGCCAACCCCACCATTAACAGCCAGGGGAATCGGTACACTGCTCCGATGAACCAGAACGCCAAGGAGGTGACAAAGCGCGTGGACACGAACGAAGGGGATTGGGCGGACTGGAACTGGAGAACGGAGGGGGACATAATGGTAAATGGAGCCTTCTTCGTGCCATCAGGTGCGGGCATGAGCACCCAGTACGCTAAGGCCTCGAGCCTTGAGCCCAAGTCGGTGGGTCTCATTGACCGCCTCACCGTCACCGCCGGTGTCTTCGGCGACCCAAGGTATGTTCTTTGCTTTTACGATTCTGCCCCCTTCAACTGTATTACCTGTCGCGTCCTAATTGTCATTATGAGGGCAAATCTAAATATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0009605 GO:0009607 GO:0009814 GO:0009825 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0016829 GO:0016835 GO:0016837 GO:0030570 GO:0031224 GO:0031225 GO:0031226 GO:0040007 GO:0042545 GO:0042547 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0045229 GO:0046658 GO:0050896 GO:0051704 GO:0051707 GO:0071554 GO:0071555 GO:0071840 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko00040 ko02024 map00040 map02024

Pfam Domains

Protein Families

Pec_lyase_C

Protein Analysis

386

Amino Acids

42.25

Weight (kDa)

6.25

Isoelectric Point (pI)

20.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pectate_lyase_4	PF00544	94 - 295	1.9e-22	Pectate lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006501)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54920 AT5G04310 AT5G04310 AT5G04310
fragaria_vesca	FvH4_7g18400 FvH4_7g18400 FvH4_7g18400 FvH4_7g18400 FvH4_7g18400
malus_domestica	MD01G1100600.v1.1
prunus_persica	Prupe.2G206100_v2.0.a1 Prupe.2G206100_v2.0.a1
pyrus_communis	pycom01g12750 pycom07g16230
rosa_chinensis	RchiOBHm_Chr1g0362211
rosa_laevigata	RLG00000027666
rosa_multiflora	Rmu_co8314571.1_g000001 Rmu_sc0001237.1_g000010
rosa_roxburghii	Rroxscaffold_4G00294430
rosa_rugosa	Rorug01G0295600 Rorug01G0295700 Rorug01G0295800.1
rosa_samantha	Rh1AG305100 Rh1BG267900 Rh1CG286100 Rh1DG297900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	661
Acc16I	TGCGCA	1 cut(s)	609
Acc36I	ACCTGC	1 cut(s)	661
AccII	CGCG	6 cut(s)	180, 321, 465, 735, 876, 1122
AclWI	GGATC	3 cut(s)	217, 251, 524
AcoI	YGGCCR	5 cut(s)	118, 145, 316, 417, 634
AcsI	RAATTY	1 cut(s)	510
AcuI	CTGAAG	1 cut(s)	481
AcvI	CACGTG	1 cut(s)	748
AcyI	GRCGYC	3 cut(s)	126, 324, 561
AdeI	CACNNNGTG	3 cut(s)	220, 751, 771
AfaI	GTAC	5 cut(s)	368, 650, 782, 833, 986
AfiI	CCNNNNNNNGG	6 cut(s)	199, 200, 570, 619, 662, 697
AgsI	TTSAA	3 cut(s)	304, 688, 1105
AjiI	CACGTC	3 cut(s)	337, 400, 454
AjnI	CCWGG	1 cut(s)	819
AluBI	AGCT	4 cut(s)	94, 274, 286, 300
AluI	AGCT	4 cut(s)	94, 274, 286, 300
Alw21I	GWGCWC	2 cut(s)	288, 980
Alw26I	GTCTC	2 cut(s)	376, 1028
AlwI	GGATC	3 cut(s)	217, 251, 524
Ama87I	CYCGRG	1 cut(s)	997
AoxI	GGCC	7 cut(s)	75, 118, 145, 316, 417, 634, 993
ApeKI	GCWGC	3 cut(s)	60, 712, 795
ApoI	RAATTY	1 cut(s)	510
AspLEI	GCGC	9 cut(s)	29, 60, 465, 503, 545, 610, 706, 800, 876
AspS9I	GGNCC	3 cut(s)	16, 75, 573
AsuC2I	CCSGG	2 cut(s)	201, 664
AsuHPI	GGTGA	8 cut(s)	154, 331, 634, 685, 763, 877, 1030, 1036
AvaI	CYCGRG	1 cut(s)	997
AvaII	GGWCC	2 cut(s)	16, 573
BaeGI	GKGCMC	1 cut(s)	206
BanII	GRGCYC	3 cut(s)	237, 288, 1011
BbrPI	CACGTG	1 cut(s)	748
BbsI	GAAGAC	1 cut(s)	1048
Bbv12I	GWGCWC	2 cut(s)	288, 980
BbvI	GCAGC	3 cut(s)	47, 724, 807
BccI	CCATC	5 cut(s)	50, 275, 317, 794, 967
BceAI	ACGGC	5 cut(s)	14, 203, 331, 493, 499
BcgI	CGANNNNNNTGC	4 cut(s)	25, 59, 97, 131
BciT130I	CCWGG	1 cut(s)	821
BcnI	CCSGG	2 cut(s)	201, 664
BcoDI	GTCTC	2 cut(s)	376, 1028
BfoI	RGCGCY	4 cut(s)	61, 504, 707, 801
BfuAI	ACCTGC	1 cut(s)	661
BglII	AGATCT	1 cut(s)	150
BmcAI	AGTACT	1 cut(s)	650
Bme1390I	CCNGG	3 cut(s)	201, 664, 821
Bme18I	GGWCC	2 cut(s)	16, 573
BmeT110I	CYCGRG	1 cut(s)	997
BmgBI	CACGTC	3 cut(s)	337, 400, 454
BmgT120I	GGNCC	3 cut(s)	16, 75, 573
BmiI	GGNNCC	3 cut(s)	67, 574, 946
BmrFI	CCNGG	3 cut(s)	201, 664, 821
BmrI	ACTGGG	2 cut(s)	82, 976
BmsI	GCATC	5 cut(s)	117, 341, 495, 615, 657
BmuI	ACTGGG	2 cut(s)	82, 976
BpiI	GAAGAC	1 cut(s)	1048
BpmI	CTGGAG	3 cut(s)	347, 424, 934
Bpu10I	CCTNAGC	1 cut(s)	990
BpuEI	CTTGAG	1 cut(s)	1025
BpuMI	CCSGG	2 cut(s)	201, 664
BsaAI	YACGTR	1 cut(s)	748
BsaHI	GRCGYC	3 cut(s)	126, 324, 561
BsaI	GGTCTC	1 cut(s)	1028
BsaJI	CCNNGG	6 cut(s)	129, 319, 722, 820, 858, 1067
BsaWI	WCCGGW	1 cut(s)	578
BsaXI	ACNNNNNCTCC	6 cut(s)	422, 452, 473, 503, 512, 542
Bsc4I	CCNNNNNNNGG	6 cut(s)	199, 200, 570, 619, 662, 697
Bse118I	RCCGGY	4 cut(s)	341, 415, 419, 1049
Bse1I	ACTGG	5 cut(s)	77, 364, 911, 917, 982
Bse3DI	GCAATG	1 cut(s)	29
BseBI	CCWGG	1 cut(s)	821
BseDI	CCNNGG	6 cut(s)	129, 319, 722, 820, 858, 1067
BseGI	GGATG	3 cut(s)	356, 384, 672
BseLI	CCNNNNNNNGG	6 cut(s)	199, 200, 570, 619, 662, 697
BseMI	GCAATG	1 cut(s)	29
BseNI	ACTGG	5 cut(s)	77, 364, 911, 917, 982
BseRI	GAGGAG	1 cut(s)	160
BseSI	GKGCMC	1 cut(s)	206
BseX3I	CGGCCG	2 cut(s)	316, 417
BseXI	GCAGC	3 cut(s)	47, 724, 807
BsgI	GTGCAG	2 cut(s)	731, 748
Bsh1236I	CGCG	6 cut(s)	180, 321, 465, 735, 876, 1122
Bsh1285I	CGRYCG	3 cut(s)	178, 319, 420
BshFI	GGCC	7 cut(s)	77, 120, 147, 318, 419, 636, 995
BsiEI	CGRYCG	3 cut(s)	178, 319, 420
BsiHKAI	GWGCWC	2 cut(s)	288, 980
BsiHKCI	CYCGRG	1 cut(s)	997
BsiSI	CCGG	8 cut(s)	200, 342, 416, 420, 579, 656, 663, 1050
BslFI	GGGAC	1 cut(s)	941
BslI	CCNNNNNNNGG	6 cut(s)	199, 200, 570, 619, 662, 697
BsmAI	GTCTC	2 cut(s)	376, 1028
BsmBI	CGTCTC	1 cut(s)	376
BsmFI	GGGAC	1 cut(s)	941
BsnI	GGCC	7 cut(s)	77, 120, 147, 318, 419, 636, 995
Bso31I	GGTCTC	1 cut(s)	1028
BsoBI	CYCGRG	1 cut(s)	997
Bsp1286I	GDGCHC	5 cut(s)	206, 237, 288, 980, 1011
Bsp143I	GATC	4 cut(s)	150, 222, 243, 516
Bsp19I	CCATGG	1 cut(s)	129
BspANI	GGCC	7 cut(s)	77, 120, 147, 318, 419, 636, 995
BspFNI	CGCG	6 cut(s)	180, 321, 465, 735, 876, 1122
BspLI	GGNNCC	3 cut(s)	67, 574, 946
BspMI	ACCTGC	1 cut(s)	661
BspPI	GGATC	3 cut(s)	217, 251, 524
BspTNI	GGTCTC	1 cut(s)	1028
BsrDI	GCAATG	1 cut(s)	29
BsrFI	RCCGGY	4 cut(s)	341, 415, 419, 1049
BsrI	ACTGG	5 cut(s)	77, 364, 911, 917, 982
BssAI	RCCGGY	4 cut(s)	341, 415, 419, 1049
BssECI	CCNNGG	6 cut(s)	129, 319, 722, 820, 858, 1067
BssMI	GATC	4 cut(s)	150, 222, 243, 516
BssNI	GRCGYC	3 cut(s)	126, 324, 561
BssT1I	CCWWGG	3 cut(s)	129, 858, 1067
Bst2UI	CCWGG	1 cut(s)	821
Bst4CI	ACNGT	2 cut(s)	1042, 1109
Bst6I	CTCTTC	1 cut(s)	500
BstACI	GRCGYC	3 cut(s)	126, 324, 561
BstAPI	GCANNNNNTGC	1 cut(s)	718
BstBAI	YACGTR	1 cut(s)	748
BstC8I	GCNNGC	8 cut(s)	56, 96, 413, 417, 421, 461, 505, 970
BstDEI	CTNAG	1 cut(s)	990
BstDSI	CCRYGG	2 cut(s)	129, 319
BstF5I	GGATG	3 cut(s)	356, 384, 672
BstFNI	CGCG	6 cut(s)	180, 321, 465, 735, 876, 1122
BstH2I	RGCGCY	4 cut(s)	61, 504, 707, 801
BstHHI	GCGC	9 cut(s)	29, 60, 465, 503, 545, 610, 706, 800, 876
BstKTI	GATC	4 cut(s)	153, 225, 246, 519
BstMAI	GTCTC	2 cut(s)	376, 1028
BstMBI	GATC	4 cut(s)	150, 222, 243, 516
BstMCI	CGRYCG	3 cut(s)	178, 319, 420
BstMWI	GCNNNNNNNGC	9 cut(s)	33, 60, 111, 144, 210, 327, 351, 712, 718
BstNI	CCWGG	1 cut(s)	821
BstSCI	CCNGG	3 cut(s)	199, 662, 819
BstSLI	GKGCMC	1 cut(s)	206
BstUI	CGCG	6 cut(s)	180, 321, 465, 735, 876, 1122
BstV1I	GCAGC	3 cut(s)	47, 724, 807
BstV2I	GAAGAC	1 cut(s)	1048
BstX2I	RGATCY	1 cut(s)	150
BstXI	CCANNNNNNTGG	1 cut(s)	1018
BstYI	RGATCY	1 cut(s)	150
BstZI	CGGCCG	2 cut(s)	316, 417
BsuRI	GGCC	7 cut(s)	77, 120, 147, 318, 419, 636, 995
BtgI	CCRYGG	2 cut(s)	129, 319
BtrI	CACGTC	3 cut(s)	337, 400, 454
BtsCI	GGATG	3 cut(s)	356, 384, 672
BtsI	GCAGTG	4 cut(s)	406, 523, 776, 834
BtsIMutI	CAGTG	4 cut(s)	406, 523, 776, 834
BveI	ACCTGC	1 cut(s)	661
Cac8I	GCNNGC	8 cut(s)	56, 96, 413, 417, 421, 461, 505, 970
CfoI	GCGC	9 cut(s)	29, 60, 465, 503, 545, 610, 706, 800, 876
Cfr10I	RCCGGY	4 cut(s)	341, 415, 419, 1049
Cfr13I	GGNCC	3 cut(s)	16, 75, 573
Cfr42I	CCGCGG	1 cut(s)	322
CseI	GACGC	6 cut(s)	134, 313, 319, 569, 741, 1111
Csp6I	GTAC	5 cut(s)	367, 649, 781, 832, 985
CspCI	CAANNNNNGTGG	2 cut(s)	858, 893
CviAII	CATG	3 cut(s)	130, 262, 973
CviQI	GTAC	5 cut(s)	367, 649, 781, 832, 985
DdeI	CTNAG	1 cut(s)	990
DpnI	GATC	4 cut(s)	152, 224, 245, 518
DpnII	GATC	4 cut(s)	150, 222, 243, 516
DraIII	CACNNNGTG	3 cut(s)	220, 751, 771
EaeI	YGGCCR	5 cut(s)	118, 145, 316, 417, 634
EagI	CGGCCG	2 cut(s)	316, 417
Eam1104I	CTCTTC	1 cut(s)	500
EarI	CTCTTC	1 cut(s)	500
EciI	GGCGGA	4 cut(s)	200, 244, 363, 917
Ecl136II	GAGCTC	1 cut(s)	286
EclXI	CGGCCG	2 cut(s)	316, 417
Eco130I	CCWWGG	3 cut(s)	129, 858, 1067
Eco147I	AGGCCT	1 cut(s)	995
Eco24I	GRGCYC	3 cut(s)	237, 288, 1011
Eco31I	GGTCTC	1 cut(s)	1028
Eco47I	GGWCC	2 cut(s)	16, 573
Eco52I	CGGCCG	2 cut(s)	316, 417
Eco53kI	GAGCTC	1 cut(s)	286
Eco57I	CTGAAG	1 cut(s)	481
Eco72I	CACGTG	1 cut(s)	748
Eco88I	CYCGRG	1 cut(s)	997
EcoICRI	GAGCTC	1 cut(s)	286
EcoRII	CCWGG	1 cut(s)	819
EcoT14I	CCWWGG	3 cut(s)	129, 858, 1067
EcoT22I	ATGCAT	1 cut(s)	356
EcoT38I	GRGCYC	3 cut(s)	237, 288, 1011
ErhI	CCWWGG	3 cut(s)	129, 858, 1067
Esp3I	CGTCTC	1 cut(s)	376
FaeI	CATG	3 cut(s)	133, 265, 976
FaqI	GGGAC	1 cut(s)	941
FatI	CATG	3 cut(s)	129, 261, 972
FauI	CCCGC	5 cut(s)	193, 458, 512, 728, 961
FokI	GGATG	3 cut(s)	363, 371, 679
FriOI	GRGCYC	3 cut(s)	237, 288, 1011
FspI	TGCGCA	1 cut(s)	609
GlaI	GCGC	9 cut(s)	28, 59, 464, 502, 544, 609, 705, 799, 875
GsuI	CTGGAG	3 cut(s)	347, 424, 934
HaeII	RGCGCY	4 cut(s)	61, 504, 707, 801
HaeIII	GGCC	7 cut(s)	77, 120, 147, 318, 419, 636, 995
HapII	CCGG	8 cut(s)	200, 342, 416, 420, 579, 656, 663, 1050
HgaI	GACGC	6 cut(s)	134, 313, 319, 569, 741, 1111
HhaI	GCGC	9 cut(s)	29, 60, 465, 503, 545, 610, 706, 800, 876
Hin1I	GRCGYC	3 cut(s)	126, 324, 561
Hin1II	CATG	3 cut(s)	133, 265, 976
Hin6I	GCGC	9 cut(s)	27, 58, 463, 501, 543, 608, 704, 798, 874
HinP1I	GCGC	9 cut(s)	27, 58, 463, 501, 543, 608, 704, 798, 874
HincII	GTYRAC	1 cut(s)	295
HindII	GTYRAC	1 cut(s)	295
HinfI	GANTC	5 cut(s)	167, 552, 582, 826, 1091
HpaII	CCGG	8 cut(s)	200, 342, 416, 420, 579, 656, 663, 1050
HphI	GGTGA	8 cut(s)	154, 331, 634, 685, 763, 877, 1030, 1036
Hpy166II	GTNNAC	7 cut(s)	295, 334, 403, 576, 754, 834, 880
Hpy188I	TCNGA	3 cut(s)	175, 475, 843
Hpy188III	TCNNGA	2 cut(s)	241, 304
Hpy8I	GTNNAC	7 cut(s)	295, 334, 403, 576, 754, 834, 880
HpyAV	CCTTC	3 cut(s)	884, 958, 1111
HpyCH4III	ACNGT	2 cut(s)	1042, 1109
HpyCH4IV	ACGT	8 cut(s)	156, 336, 369, 378, 399, 432, 453, 747
HpyCH4V	TGCA	5 cut(s)	354, 411, 670, 712, 729
HpyF10VI	GCNNNNNNNGC	9 cut(s)	33, 60, 111, 144, 210, 327, 351, 712, 718
HpyF3I	CTNAG	1 cut(s)	990
HpySE526I	ACGT	8 cut(s)	156, 336, 369, 378, 399, 432, 453, 747
Hsp92I	GRCGYC	3 cut(s)	126, 324, 561
Hsp92II	CATG	3 cut(s)	133, 265, 976
HspAI	GCGC	9 cut(s)	27, 58, 463, 501, 543, 608, 704, 798, 874
KroI	GCCGGC	2 cut(s)	415, 419
KroNI	GCCGGC	2 cut(s)	417, 421
KspI	CCGCGG	1 cut(s)	322
Kzo9I	GATC	4 cut(s)	150, 222, 243, 516
LmnI	GCTCC	4 cut(s)	71, 533, 844, 944
Lsp1109I	GCAGC	3 cut(s)	47, 724, 807
LweI	GCATC	5 cut(s)	117, 341, 495, 615, 657
MaeII	ACGT	8 cut(s)	156, 336, 369, 378, 399, 432, 453, 747
MaeIII	GTNAC	5 cut(s)	160, 337, 673, 865, 1042
MalI	GATC	4 cut(s)	152, 224, 245, 518
MboI	GATC	4 cut(s)	150, 222, 243, 516
MboII	GAAGA	4 cut(s)	241, 487, 943, 1048
MflI	RGATCY	1 cut(s)	150
MhlI	GDGCHC	5 cut(s)	206, 237, 288, 980, 1011
MluCI	AATT	2 cut(s)	510, 1128
MlyI	GAGTC	2 cut(s)	161, 546
MmeI	TCCRAC	5 cut(s)	93, 198, 399, 498, 618
Mph1103I	ATGCAT	1 cut(s)	356
MroNI	GCCGGC	2 cut(s)	415, 419
MseI	TTAA	1 cut(s)	813
MslI	CAYNNNNRTG	1 cut(s)	665
MspA1I	CMGCKG	1 cut(s)	321
MspI	CCGG	8 cut(s)	200, 342, 416, 420, 579, 656, 663, 1050
MspR9I	CCNGG	3 cut(s)	201, 664, 821
MvaI	CCWGG	1 cut(s)	821
MvnI	CGCG	6 cut(s)	180, 321, 465, 735, 876, 1122
MwoI	GCNNNNNNNGC	9 cut(s)	33, 60, 111, 144, 210, 327, 351, 712, 718
NaeI	GCCGGC	2 cut(s)	417, 421
NciI	CCSGG	2 cut(s)	201, 664
NcoI	CCATGG	1 cut(s)	129
NdeII	GATC	4 cut(s)	150, 222, 243, 516
NgoMIV	GCCGGC	2 cut(s)	415, 419
NlaIII	CATG	3 cut(s)	133, 265, 976
NlaIV	GGNNCC	3 cut(s)	67, 574, 946
NmeAIII	GCCGAG	1 cut(s)	612
NmuCI	GTSAC	5 cut(s)	160, 337, 673, 865, 1042
NsbI	TGCGCA	1 cut(s)	609
NsiI	ATGCAT	1 cut(s)	356
PaeR7I	CTCGAG	1 cut(s)	997
PaqCI	CACCTGC	1 cut(s)	661
PceI	AGGCCT	1 cut(s)	995
PcsI	WCGNNNNNNNCGW	6 cut(s)	162, 288, 321, 375, 555, 639
PdiI	GCCGGC	2 cut(s)	417, 421
PfeI	GAWTC	3 cut(s)	582, 826, 1091
PleI	GAGTC	2 cut(s)	161, 546
PmaCI	CACGTG	1 cut(s)	748
PmlI	CACGTG	1 cut(s)	748
PpsI	GAGTC	2 cut(s)	161, 546
Ppu21I	YACGTR	1 cut(s)	748
Psp124BI	GAGCTC	1 cut(s)	288
Psp6I	CCWGG	1 cut(s)	819
PspCI	CACGTG	1 cut(s)	748
PspGI	CCWGG	1 cut(s)	819
PspN4I	GGNNCC	3 cut(s)	67, 574, 946
PspPI	GGNCC	3 cut(s)	16, 75, 573
PspXI	VCTCGAGB	1 cut(s)	997
PsuI	RGATCY	1 cut(s)	150
RsaI	GTAC	5 cut(s)	368, 650, 782, 833, 986
RsaNI	GTAC	5 cut(s)	367, 649, 781, 832, 985
RseI	CAYNNNNRTG	1 cut(s)	665
SacI	GAGCTC	1 cut(s)	288
SacII	CCGCGG	1 cut(s)	322
SaqAI	TTAA	1 cut(s)	813
Sau3AI	GATC	4 cut(s)	150, 222, 243, 516
Sau96I	GGNCC	3 cut(s)	16, 75, 573
ScaI	AGTACT	1 cut(s)	650
SchI	GAGTC	2 cut(s)	161, 546
ScrFI	CCNGG	3 cut(s)	201, 664, 821
SduI	GDGCHC	5 cut(s)	206, 237, 288, 980, 1011
SfaNI	GCATC	5 cut(s)	117, 341, 495, 615, 657
Sfr274I	CTCGAG	1 cut(s)	997
Sfr303I	CCGCGG	1 cut(s)	322
SgrAI	CRCCGGYG	2 cut(s)	341, 1049
SgrBI	CCGCGG	1 cut(s)	322
SinI	GGWCC	2 cut(s)	16, 573
SlaI	CTCGAG	1 cut(s)	997
SmiMI	CAYNNNNRTG	1 cut(s)	665
SmlI	CTYRAG	3 cut(s)	11, 997, 1004
SmoI	CTYRAG	3 cut(s)	11, 997, 1004
Sse9I	AATT	2 cut(s)	510, 1128
SseBI	AGGCCT	1 cut(s)	995
SstI	GAGCTC	1 cut(s)	288
StuI	AGGCCT	1 cut(s)	995
StyD4I	CCNGG	3 cut(s)	199, 662, 819
StyI	CCWWGG	3 cut(s)	129, 858, 1067
TaaI	ACNGT	2 cut(s)	1042, 1109
TaiI	ACGT	8 cut(s)	159, 339, 372, 381, 402, 435, 456, 750
TaqI	TCGA	6 cut(s)	45, 282, 312, 519, 558, 998
TasI	AATT	2 cut(s)	510, 1128
TatI	WGTACW	1 cut(s)	648
TauI	GCSGC	7 cut(s)	66, 108, 147, 321, 324, 348, 795
TfiI	GAWTC	3 cut(s)	582, 826, 1091
Tru1I	TTAA	1 cut(s)	813
Tru9I	TTAA	1 cut(s)	813
TscAI	CASTG	4 cut(s)	413, 530, 776, 841
TseFI	GTSAC	5 cut(s)	160, 337, 673, 865, 1042
TseI	GCWGC	3 cut(s)	60, 712, 795
Tsp45I	GTSAC	5 cut(s)	160, 337, 673, 865, 1042
TspDTI	ATGAA	1 cut(s)	860
TspGWI	ACGGA	2 cut(s)	564, 935
TspRI	CASTG	4 cut(s)	413, 530, 776, 841
VpaK11BI	GGWCC	2 cut(s)	16, 573
XapI	RAATTY	1 cut(s)	510
XhoI	CTCGAG	1 cut(s)	997
ZrmI	AGTACT	1 cut(s)	650
Zsp2I	ATGCAT	1 cut(s)	356

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.