Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0006501

Physical Location & Seq

Genomic Coordinates Forward (+)

52360880 .. 52366616

Gene Structure 5737 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG297900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1335 bp

ATGCTTCCTACCACCTGCATTCTCTTAATATGCCTCTTGAGCTCTCTCTGTTCCCTCACCTCAGCTTCTCTAAACCTCAACCTCACCCTCCCTCATCAACACCCCTACCCTGAAGCTGTGGCTCAAGAAGTACAAAGGAGAGTCAATGCCTCCCTTTCCCGGCGCGAAATGCTGTCCCTCAAGGACCAGCAATGCGCCGTCGGCAACCCCATCGACGACTGCTGGCGCTGCGACTCCAACTGGGCCAACGACCGCCAGAAGCTCGCCGACTGCGGCATCGGCTTCGGCCAAGACGCCATGGGTGGCAAAGGAGGCCAGATCTACGTCGTCACCGACTCCTCCGACCGCGACCCCGCCAACCCAACTCCGGGCACTCTCCGCCACGCCGTGATCCAAACCGAGCCCCTCTGGATCATCTTCTCCGCCGACATGACCATCAAGCTCAAAGTCGAGCTCATCGTCAACAGCTTCAAGACCATCGACGGCCGCGGCGCCAGCGTCCACGTCACCGGCGGCGGATGCATAACCCTCCAGTACGTCTCCAACATCATCATCCACAACATTCACGTCCACCACTGCAAGCCCGCCGGCAACACCAACGTCGCCTCCAGCCCCACCCACGTCGGCTGGCGCGGGAAGTCCGACGGCGACGGCATCTCCCTCTTCAGCGCCCGCAAAATTTGGATCGACCACTGCTCCCTGTCCTACTGCGCCGACGGACTCATCGACGCCATAATGGGGTCCACCGGGATCACGATTTCCAACAACCACTTTGCGCACCACGACGAGGTGATGCTTCTCGGCCACAACGATAAGTACTCGCCGGACACCGGGATGCAGGTGACGATTGCGTTCAACCACTTCGGGGAGGCGCTGGTGCAGCGTATGCCTCGTTGCCGGCTCGGGTATATTCACGTGGTGAACAATGACTTCACGCAGTGGGAGATGTACGCTATCGGCGGCAGCGCCAACCCCACCATTAACAGCCAGGGGAATCGGTACACTGCTCCGATGGACCAGAACGCCAAGGAGGTGACAAAGCGCGTGGACACGAACGAAGGGGATTGGGCGGACTGGAACTGGAGAACGGAGGGGGACATAATGGTAAATGGAGCCTTCTTCGTGCCATCAGGTGCGGGCATGAGCACCCAGTACGCTAAGGCCTCAAGCCTCGAGCCCAAGTCGGTTGGTCTCATTGACCGCCTCACCGTCACCGCCGGTGTCTTCGGCGACCCAAGGTATGTTCTTTGCTTTTACGATTCTGCCCCCTTCAACTGTATTACCTGTCGCGTCCTAACTGTCATTATGAGGGCAAATCTAAATCTAATACAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0009605 GO:0009607 GO:0009814 GO:0009825 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0016829 GO:0016835 GO:0016837 GO:0030570 GO:0031224 GO:0031225 GO:0031226 GO:0040007 GO:0042545 GO:0042547 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0045229 GO:0046658 GO:0050896 GO:0051704 GO:0051707 GO:0071554 GO:0071555 GO:0071840 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko00040 ko02024 map00040 map02024

Pfam Domains

Protein Families

Pec_lyase_C

Protein Analysis

444

Amino Acids

48.66

Weight (kDa)

6.23

Isoelectric Point (pI)

25.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pectate_lyase_4	PF00544	150 - 351	2.3e-21	Pectate lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006501)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54920 AT5G04310 AT5G04310 AT5G04310
fragaria_vesca	FvH4_7g18400 FvH4_7g18400 FvH4_7g18400 FvH4_7g18400 FvH4_7g18400
malus_domestica	MD01G1100600.v1.1
prunus_persica	Prupe.2G206100_v2.0.a1 Prupe.2G206100_v2.0.a1
pyrus_communis	pycom01g12750 pycom07g16230
rosa_chinensis	RchiOBHm_Chr1g0362211
rosa_laevigata	RLG00000027666
rosa_multiflora	Rmu_co8314571.1_g000001 Rmu_sc0001237.1_g000010
rosa_roxburghii	Rroxscaffold_4G00294430
rosa_rugosa	Rorug01G0295600 Rorug01G0295700 Rorug01G0295800.1
rosa_samantha	Rh1AG305100 Rh1BG267900 Rh1CG286100 Rh1DG297900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	23, 829
Acc16I	TGCGCA	1 cut(s)	777
Acc36I	ACCTGC	2 cut(s)	23, 829
AccB1I	GGYRCC	1 cut(s)	491
AccII	CGCG	6 cut(s)	165, 348, 489, 633, 1044, 1290
AclWI	GGATC	4 cut(s)	385, 419, 692, 758
AcoI	YGGCCR	3 cut(s)	286, 484, 802
AcsI	RAATTY	1 cut(s)	678
AcuI	CTGAAG	2 cut(s)	132, 649
AcvI	CACGTG	1 cut(s)	916
AcyI	GRCGYC	3 cut(s)	294, 492, 729
AdeI	CACNNNGTG	3 cut(s)	388, 919, 939
AfaI	GTAC	6 cut(s)	132, 536, 818, 950, 1001, 1154
AfiI	CCNNNNNNNGG	7 cut(s)	159, 367, 368, 738, 787, 830, 865
AgsI	TTSAA	3 cut(s)	472, 856, 1273
AjiI	CACGTC	3 cut(s)	505, 568, 622
AjnI	CCWGG	1 cut(s)	987
AluBI	AGCT	7 cut(s)	42, 65, 116, 262, 442, 454, 468
AluI	AGCT	7 cut(s)	42, 65, 116, 262, 442, 454, 468
Alw21I	GWGCWC	3 cut(s)	44, 456, 1148
Alw26I	GTCTC	2 cut(s)	544, 1196
AlwI	GGATC	4 cut(s)	385, 419, 692, 758
Ama87I	CYCGRG	2 cut(s)	902, 1172
AoxI	GGCC	6 cut(s)	243, 286, 313, 484, 802, 1161
ApeKI	GCWGC	3 cut(s)	228, 880, 963
ApoI	RAATTY	1 cut(s)	678
AspS9I	GGNCC	4 cut(s)	184, 243, 741, 1015
AsuC2I	CCSGG	4 cut(s)	160, 369, 748, 832
AvaI	CYCGRG	2 cut(s)	902, 1172
AvaII	GGWCC	3 cut(s)	184, 741, 1015
BaeGI	GKGCMC	1 cut(s)	374
BanI	GGYRCC	1 cut(s)	491
BanII	GRGCYC	4 cut(s)	44, 405, 456, 1179
BbrPI	CACGTG	1 cut(s)	916
BbsI	GAAGAC	1 cut(s)	1216
Bbv12I	GWGCWC	3 cut(s)	44, 456, 1148
BbvCI	CCTCAGC	1 cut(s)	61
BbvI	GCAGC	3 cut(s)	215, 892, 975
BccI	CCATC	5 cut(s)	218, 443, 485, 1006, 1135
BceAI	ACGGC	5 cut(s)	182, 371, 499, 661, 667
BcgI	CGANNNNNNTGC	4 cut(s)	193, 227, 265, 299
BciT130I	CCWGG	1 cut(s)	989
BcnI	CCSGG	4 cut(s)	160, 369, 748, 832
BcoDI	GTCTC	2 cut(s)	544, 1196
BfoI	RGCGCY	5 cut(s)	229, 495, 672, 875, 969
BfuAI	ACCTGC	2 cut(s)	23, 829
BglII	AGATCT	1 cut(s)	318
BisI	GCNGC	8 cut(s)	229, 274, 487, 490, 514, 881, 961, 964
BlsI	GCNGC	8 cut(s)	230, 275, 488, 491, 515, 882, 962, 965
BmcAI	AGTACT	1 cut(s)	818
Bme1390I	CCNGG	5 cut(s)	160, 369, 748, 832, 989
Bme18I	GGWCC	3 cut(s)	184, 741, 1015
BmeT110I	CYCGRG	2 cut(s)	902, 1172
BmgBI	CACGTC	3 cut(s)	505, 568, 622
BmgT120I	GGNCC	4 cut(s)	184, 243, 741, 1015
BmiI	GGNNCC	3 cut(s)	493, 742, 1114
BmrFI	CCNGG	5 cut(s)	160, 369, 748, 832, 989
BmrI	ACTGGG	2 cut(s)	250, 1144
BmsI	GCATC	5 cut(s)	285, 509, 663, 783, 825
BmuI	ACTGGG	2 cut(s)	250, 1144
BpiI	GAAGAC	1 cut(s)	1216
BpmI	CTGGAG	3 cut(s)	515, 592, 1102
Bpu10I	CCTNAGC	2 cut(s)	61, 1158
BpuEI	CTTGAG	4 cut(s)	58, 108, 164, 1150
BpuMI	CCSGG	4 cut(s)	160, 369, 748, 832
BsaAI	YACGTR	1 cut(s)	916
BsaHI	GRCGYC	3 cut(s)	294, 492, 729
BsaI	GGTCTC	1 cut(s)	1196
BsaJI	CCNNGG	5 cut(s)	297, 487, 988, 1026, 1235
BsaXI	ACNNNNNCTCC	6 cut(s)	590, 620, 641, 671, 680, 710
Bsc4I	CCNNNNNNNGG	7 cut(s)	159, 367, 368, 738, 787, 830, 865
Bse118I	RCCGGY	4 cut(s)	509, 587, 897, 1217
Bse1I	ACTGG	5 cut(s)	245, 532, 1079, 1085, 1150
Bse3DI	GCAATG	1 cut(s)	197
BseBI	CCWGG	1 cut(s)	989
BseDI	CCNNGG	5 cut(s)	297, 487, 988, 1026, 1235
BseGI	GGATG	3 cut(s)	524, 552, 840
BseLI	CCNNNNNNNGG	7 cut(s)	159, 367, 368, 738, 787, 830, 865
BseMI	GCAATG	1 cut(s)	197
BseMII	CTCAG	1 cut(s)	75
BseNI	ACTGG	5 cut(s)	245, 532, 1079, 1085, 1150
BseRI	GAGGAG	1 cut(s)	328
BseSI	GKGCMC	1 cut(s)	374
BseX3I	CGGCCG	1 cut(s)	484
BseXI	GCAGC	3 cut(s)	215, 892, 975
BsgI	GTGCAG	1 cut(s)	899
Bsh1236I	CGCG	6 cut(s)	165, 348, 489, 633, 1044, 1290
Bsh1285I	CGRYCG	3 cut(s)	253, 346, 487
BshFI	GGCC	6 cut(s)	245, 288, 315, 486, 804, 1163
BshNI	GGYRCC	1 cut(s)	491
BsiEI	CGRYCG	3 cut(s)	253, 346, 487
BsiHKAI	GWGCWC	3 cut(s)	44, 456, 1148
BsiHKCI	CYCGRG	2 cut(s)	902, 1172
BsiSI	CCGG	9 cut(s)	160, 368, 510, 588, 747, 824, 831, 898, 1218
BslFI	GGGAC	2 cut(s)	160, 1109
BslI	CCNNNNNNNGG	7 cut(s)	159, 367, 368, 738, 787, 830, 865
BsmAI	GTCTC	2 cut(s)	544, 1196
BsmBI	CGTCTC	1 cut(s)	544
BsmFI	GGGAC	2 cut(s)	160, 1109
BsmI	GAATGC	1 cut(s)	18
BsnI	GGCC	6 cut(s)	245, 288, 315, 486, 804, 1163
Bso31I	GGTCTC	1 cut(s)	1196
BsoBI	CYCGRG	2 cut(s)	902, 1172
Bsp1286I	GDGCHC	6 cut(s)	44, 374, 405, 456, 1148, 1179
Bsp143I	GATC	5 cut(s)	318, 390, 411, 684, 750
Bsp19I	CCATGG	1 cut(s)	297
BspANI	GGCC	6 cut(s)	245, 288, 315, 486, 804, 1163
BspCNI	CTCAG	1 cut(s)	74
BspFNI	CGCG	6 cut(s)	165, 348, 489, 633, 1044, 1290
BspLI	GGNNCC	3 cut(s)	493, 742, 1114
BspMI	ACCTGC	2 cut(s)	23, 829
BspPI	GGATC	4 cut(s)	385, 419, 692, 758
BspT107I	GGYRCC	1 cut(s)	491
BspTNI	GGTCTC	1 cut(s)	1196
BsrDI	GCAATG	1 cut(s)	197
BsrFI	RCCGGY	4 cut(s)	509, 587, 897, 1217
BsrI	ACTGG	5 cut(s)	245, 532, 1079, 1085, 1150
BssAI	RCCGGY	4 cut(s)	509, 587, 897, 1217
BssECI	CCNNGG	5 cut(s)	297, 487, 988, 1026, 1235
BssMI	GATC	5 cut(s)	318, 390, 411, 684, 750
BssNI	GRCGYC	3 cut(s)	294, 492, 729
BssT1I	CCWWGG	3 cut(s)	297, 1026, 1235
Bst2UI	CCWGG	1 cut(s)	989
Bst4CI	ACNGT	3 cut(s)	1210, 1277, 1300
Bst6I	CTCTTC	1 cut(s)	668
BstACI	GRCGYC	3 cut(s)	294, 492, 729
BstAPI	GCANNNNNTGC	1 cut(s)	886
BstBAI	YACGTR	1 cut(s)	916
BstDEI	CTNAG	2 cut(s)	61, 1158
BstDSI	CCRYGG	2 cut(s)	297, 487
BstF5I	GGATG	3 cut(s)	524, 552, 840
BstFNI	CGCG	6 cut(s)	165, 348, 489, 633, 1044, 1290
BstH2I	RGCGCY	5 cut(s)	229, 495, 672, 875, 969
BstKTI	GATC	5 cut(s)	321, 393, 414, 687, 753
BstMAI	GTCTC	2 cut(s)	544, 1196
BstMBI	GATC	5 cut(s)	318, 390, 411, 684, 750
BstMCI	CGRYCG	3 cut(s)	253, 346, 487
BstNI	CCWGG	1 cut(s)	989
BstSCI	CCNGG	5 cut(s)	158, 367, 746, 830, 987
BstSLI	GKGCMC	1 cut(s)	374
BstUI	CGCG	6 cut(s)	165, 348, 489, 633, 1044, 1290
BstV1I	GCAGC	3 cut(s)	215, 892, 975
BstV2I	GAAGAC	1 cut(s)	1216
BstX2I	RGATCY	1 cut(s)	318
BstYI	RGATCY	1 cut(s)	318
BstZI	CGGCCG	1 cut(s)	484
BsuRI	GGCC	6 cut(s)	245, 288, 315, 486, 804, 1163
BtgI	CCRYGG	2 cut(s)	297, 487
BtrI	CACGTC	3 cut(s)	505, 568, 622
BtsCI	GGATG	3 cut(s)	524, 552, 840
BtsI	GCAGTG	4 cut(s)	574, 691, 944, 1002
BtsIMutI	CAGTG	4 cut(s)	574, 691, 944, 1002
BveI	ACCTGC	2 cut(s)	23, 829
Cfr10I	RCCGGY	4 cut(s)	509, 587, 897, 1217
Cfr13I	GGNCC	4 cut(s)	184, 243, 741, 1015
Cfr42I	CCGCGG	1 cut(s)	490
CseI	GACGC	4 cut(s)	302, 487, 737, 1279
Csp6I	GTAC	6 cut(s)	131, 535, 817, 949, 1000, 1153
CspCI	CAANNNNNGTGG	2 cut(s)	1026, 1061
CviAII	CATG	3 cut(s)	298, 430, 1141
CviQI	GTAC	6 cut(s)	131, 535, 817, 949, 1000, 1153
DdeI	CTNAG	2 cut(s)	61, 1158
DinI	GGCGCC	1 cut(s)	493
DpnI	GATC	5 cut(s)	320, 392, 413, 686, 752
DpnII	GATC	5 cut(s)	318, 390, 411, 684, 750
DraIII	CACNNNGTG	3 cut(s)	388, 919, 939
EaeI	YGGCCR	3 cut(s)	286, 484, 802
EagI	CGGCCG	1 cut(s)	484
Eam1104I	CTCTTC	1 cut(s)	668
EarI	CTCTTC	1 cut(s)	668
EciI	GGCGGA	4 cut(s)	368, 412, 531, 1085
Ecl136II	GAGCTC	2 cut(s)	42, 454
EclXI	CGGCCG	1 cut(s)	484
Eco130I	CCWWGG	3 cut(s)	297, 1026, 1235
Eco147I	AGGCCT	1 cut(s)	1163
Eco24I	GRGCYC	4 cut(s)	44, 405, 456, 1179
Eco31I	GGTCTC	1 cut(s)	1196
Eco47I	GGWCC	3 cut(s)	184, 741, 1015
Eco52I	CGGCCG	1 cut(s)	484
Eco53kI	GAGCTC	2 cut(s)	42, 454
Eco57I	CTGAAG	2 cut(s)	132, 649
Eco72I	CACGTG	1 cut(s)	916
Eco88I	CYCGRG	2 cut(s)	902, 1172
EcoICRI	GAGCTC	2 cut(s)	42, 454
EcoRII	CCWGG	1 cut(s)	987
EcoT14I	CCWWGG	3 cut(s)	297, 1026, 1235
EcoT22I	ATGCAT	1 cut(s)	524
EcoT38I	GRGCYC	4 cut(s)	44, 405, 456, 1179
EgeI	GGCGCC	1 cut(s)	493
EheI	GGCGCC	1 cut(s)	493
ErhI	CCWWGG	3 cut(s)	297, 1026, 1235
Esp3I	CGTCTC	1 cut(s)	544
FaeI	CATG	3 cut(s)	301, 433, 1144
FaqI	GGGAC	2 cut(s)	160, 1109
FatI	CATG	3 cut(s)	297, 429, 1140
FauI	CCCGC	5 cut(s)	361, 592, 626, 680, 1129
Fnu4HI	GCNGC	8 cut(s)	229, 274, 487, 490, 514, 881, 961, 964
FokI	GGATG	3 cut(s)	531, 539, 847
FriOI	GRGCYC	4 cut(s)	44, 405, 456, 1179
Fsp4HI	GCNGC	8 cut(s)	229, 274, 487, 490, 514, 881, 961, 964
FspI	TGCGCA	1 cut(s)	777
GluI	GCNGC	8 cut(s)	229, 274, 487, 490, 514, 881, 961, 964
GsuI	CTGGAG	3 cut(s)	515, 592, 1102
HaeII	RGCGCY	5 cut(s)	229, 495, 672, 875, 969
HaeIII	GGCC	6 cut(s)	245, 288, 315, 486, 804, 1163
HapII	CCGG	9 cut(s)	160, 368, 510, 588, 747, 824, 831, 898, 1218
HgaI	GACGC	4 cut(s)	302, 487, 737, 1279
Hin1I	GRCGYC	3 cut(s)	294, 492, 729
Hin1II	CATG	3 cut(s)	301, 433, 1144
HincII	GTYRAC	1 cut(s)	463
HindII	GTYRAC	1 cut(s)	463
HinfI	GANTC	6 cut(s)	141, 233, 335, 720, 994, 1259
HpaII	CCGG	9 cut(s)	160, 368, 510, 588, 747, 824, 831, 898, 1218
Hpy166II	GTNNAC	7 cut(s)	463, 502, 571, 744, 922, 1002, 1048
Hpy188I	TCNGA	3 cut(s)	343, 643, 1011
Hpy188III	TCNNGA	5 cut(s)	37, 125, 409, 472, 754
Hpy8I	GTNNAC	7 cut(s)	463, 502, 571, 744, 922, 1002, 1048
HpyAV	CCTTC	3 cut(s)	1052, 1126, 1279
HpyCH4III	ACNGT	3 cut(s)	1210, 1277, 1300
HpyCH4IV	ACGT	7 cut(s)	324, 504, 537, 567, 600, 621, 915
HpyCH4V	TGCA	5 cut(s)	18, 522, 579, 838, 880
HpyF3I	CTNAG	2 cut(s)	61, 1158
HpySE526I	ACGT	7 cut(s)	324, 504, 537, 567, 600, 621, 915
Hsp92I	GRCGYC	3 cut(s)	294, 492, 729
Hsp92II	CATG	3 cut(s)	301, 433, 1144
KasI	GGCGCC	1 cut(s)	491
KroI	GCCGGC	2 cut(s)	587, 897
KroNI	GCCGGC	2 cut(s)	589, 899
KspI	CCGCGG	1 cut(s)	490
Kzo9I	GATC	5 cut(s)	318, 390, 411, 684, 750
LmnI	GCTCC	3 cut(s)	701, 1012, 1112
Lsp1109I	GCAGC	3 cut(s)	215, 892, 975
LweI	GCATC	5 cut(s)	285, 509, 663, 783, 825
MaeII	ACGT	7 cut(s)	324, 504, 537, 567, 600, 621, 915
MaeIII	GTNAC	5 cut(s)	328, 505, 841, 1033, 1210
MalI	GATC	5 cut(s)	320, 392, 413, 686, 752
MboI	GATC	5 cut(s)	318, 390, 411, 684, 750
MboII	GAAGA	4 cut(s)	409, 655, 1111, 1216
MflI	RGATCY	1 cut(s)	318
MhlI	GDGCHC	6 cut(s)	44, 374, 405, 456, 1148, 1179
MluCI	AATT	1 cut(s)	678
Mly113I	GGCGCC	1 cut(s)	492
MlyI	GAGTC	4 cut(s)	150, 227, 329, 714
MmeI	TCCRAC	5 cut(s)	261, 366, 567, 666, 786
Mph1103I	ATGCAT	1 cut(s)	524
MroNI	GCCGGC	2 cut(s)	587, 897
MseI	TTAA	2 cut(s)	26, 981
MslI	CAYNNNNRTG	1 cut(s)	833
MspA1I	CMGCKG	1 cut(s)	489
MspI	CCGG	9 cut(s)	160, 368, 510, 588, 747, 824, 831, 898, 1218
MspR9I	CCNGG	5 cut(s)	160, 369, 748, 832, 989
Mva1269I	GAATGC	1 cut(s)	18
MvaI	CCWGG	1 cut(s)	989
MvnI	CGCG	6 cut(s)	165, 348, 489, 633, 1044, 1290
NaeI	GCCGGC	2 cut(s)	589, 899
NarI	GGCGCC	1 cut(s)	492
NciI	CCSGG	4 cut(s)	160, 369, 748, 832
NcoI	CCATGG	1 cut(s)	297
NdeII	GATC	5 cut(s)	318, 390, 411, 684, 750
NgoMIV	GCCGGC	2 cut(s)	587, 897
NlaIII	CATG	3 cut(s)	301, 433, 1144
NlaIV	GGNNCC	3 cut(s)	493, 742, 1114
NmeAIII	GCCGAG	1 cut(s)	780
NmuCI	GTSAC	5 cut(s)	328, 505, 841, 1033, 1210
NsbI	TGCGCA	1 cut(s)	777
NsiI	ATGCAT	1 cut(s)	524
PaeR7I	CTCGAG	1 cut(s)	1172
PaqCI	CACCTGC	2 cut(s)	23, 829
PceI	AGGCCT	1 cut(s)	1163
PcsI	WCGNNNNNNNCGW	4 cut(s)	330, 456, 723, 807
PctI	GAATGC	1 cut(s)	18
PdiI	GCCGGC	2 cut(s)	589, 899
PfeI	GAWTC	2 cut(s)	994, 1259
PkrI	GCNGC	8 cut(s)	230, 275, 488, 491, 515, 882, 962, 965
PleI	GAGTC	4 cut(s)	149, 227, 329, 714
PluTI	GGCGCC	1 cut(s)	495
PmaCI	CACGTG	1 cut(s)	916
PmlI	CACGTG	1 cut(s)	916
PpsI	GAGTC	4 cut(s)	149, 227, 329, 714
Ppu21I	YACGTR	1 cut(s)	916
Psp124BI	GAGCTC	2 cut(s)	44, 456
Psp6I	CCWGG	1 cut(s)	987
PspCI	CACGTG	1 cut(s)	916
PspGI	CCWGG	1 cut(s)	987
PspN4I	GGNNCC	3 cut(s)	493, 742, 1114
PspPI	GGNCC	4 cut(s)	184, 243, 741, 1015
PspXI	VCTCGAGB	1 cut(s)	1172
PsuI	RGATCY	1 cut(s)	318
RsaI	GTAC	6 cut(s)	132, 536, 818, 950, 1001, 1154
RsaNI	GTAC	6 cut(s)	131, 535, 817, 949, 1000, 1153
RseI	CAYNNNNRTG	1 cut(s)	833
SacI	GAGCTC	2 cut(s)	44, 456
SacII	CCGCGG	1 cut(s)	490
SaqAI	TTAA	2 cut(s)	26, 981
SatI	GCNGC	8 cut(s)	229, 274, 487, 490, 514, 881, 961, 964
Sau3AI	GATC	5 cut(s)	318, 390, 411, 684, 750
Sau96I	GGNCC	4 cut(s)	184, 243, 741, 1015
ScaI	AGTACT	1 cut(s)	818
SchI	GAGTC	4 cut(s)	150, 227, 329, 714
ScrFI	CCNGG	5 cut(s)	160, 369, 748, 832, 989
SduI	GDGCHC	6 cut(s)	44, 374, 405, 456, 1148, 1179
SfaNI	GCATC	5 cut(s)	285, 509, 663, 783, 825
SfoI	GGCGCC	1 cut(s)	493
Sfr274I	CTCGAG	1 cut(s)	1172
Sfr303I	CCGCGG	1 cut(s)	490
SgrAI	CRCCGGYG	2 cut(s)	509, 1217
SgrBI	CCGCGG	1 cut(s)	490
SinI	GGWCC	3 cut(s)	184, 741, 1015
SlaI	CTCGAG	1 cut(s)	1172
SmiMI	CAYNNNNRTG	1 cut(s)	833
SmlI	CTYRAG	5 cut(s)	37, 123, 179, 1165, 1172
SmoI	CTYRAG	5 cut(s)	37, 123, 179, 1165, 1172
Sse9I	AATT	1 cut(s)	678
SseBI	AGGCCT	1 cut(s)	1163
SspDI	GGCGCC	1 cut(s)	491
SstI	GAGCTC	2 cut(s)	44, 456
StuI	AGGCCT	1 cut(s)	1163
StyD4I	CCNGG	5 cut(s)	158, 367, 746, 830, 987
StyI	CCWWGG	3 cut(s)	297, 1026, 1235
TaaI	ACNGT	3 cut(s)	1210, 1277, 1300
TaiI	ACGT	7 cut(s)	327, 507, 540, 570, 603, 624, 918
TaqI	TCGA	6 cut(s)	213, 450, 480, 687, 726, 1173
TasI	AATT	1 cut(s)	678
TatI	WGTACW	2 cut(s)	130, 816
TauI	GCSGC	5 cut(s)	276, 489, 492, 516, 963
TfiI	GAWTC	2 cut(s)	994, 1259
Tru1I	TTAA	2 cut(s)	26, 981
Tru9I	TTAA	2 cut(s)	26, 981
TscAI	CASTG	4 cut(s)	581, 698, 944, 1009
TseFI	GTSAC	5 cut(s)	328, 505, 841, 1033, 1210
TseI	GCWGC	3 cut(s)	228, 880, 963
Tsp45I	GTSAC	5 cut(s)	328, 505, 841, 1033, 1210
TspGWI	ACGGA	2 cut(s)	732, 1103
TspRI	CASTG	4 cut(s)	581, 698, 944, 1009
VpaK11BI	GGWCC	3 cut(s)	184, 741, 1015
XapI	RAATTY	1 cut(s)	678
XhoI	CTCGAG	1 cut(s)	1172
ZrmI	AGTACT	1 cut(s)	818
Zsp2I	ATGCAT	1 cut(s)	524

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.