Prupe.2G220900_v2.0.a1

Belongs to the adenylate kinase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
24910680 .. 24913535
2856 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G220900.1

Sequence Viewer

Length: 867 bp
ATGGCGGTTTTGAACCGCGTTTTAAGATTAAGAGCAGCAAGCTCTTTCTCAGTTCGGAGCTTCCGTTCATCATCCTTTCTAAATTCCGAAACTGACCTCAAGGCGTCTTCCTCTGTCATCGCCCAAAACTCTCTTCCTCTGCAGCGAGACGTTAAGGACAGGAATGTCCAGTGGGTCTTCCTCGGCTGCCCCGGCGTCGGCAAAGGCACCTACGCCTCTCGCCTCTCGACCCTCCTCGGCGTCCCCCACATCGCCACCGGCGATCTCGTTCGAGACGAGCTCTCGTCTTCTGGTCCCTTCGCTCTTCAGCTTGCAGAGGTTGTGAACCAGGGAAAATTGGTTTCGGATGAGATTATCATAAACTTGTTGTCCAAGCGTCTTGAAGCTAGTGCAGCTAAGGGTGAAACTGGCTTCATTCTTGACGGTTTTCCTCGAACTATTCGTCAGGCGGAAATTTTAGAGGGCGTAACAGACATTGACTTGGTGGTCAACCTAAAGCTTCGTGAAGAGGCTCTACTTGCGAAGTGCCTTGGAAGAAGGATTTGTAGTGAGTGTGGAGGGAATTACAATGTGGCCTGCATTGACATTAAGGGTGAGGATGGGAAGCCTGGCATGTACATGGCTCCACTTCTTCCCCCTCCACATTGTGCATCAAAGCTTATCACACGATCCGATGACACTGAAGAAGTTGTGAAGGAAAGACTCCGGATATATAATGATAAGAGTCAACCTGTGGAGGGGTTCTACTGCAGTCGAGGAAAATTGTTAGAGTTTGATCTTCCTGGAGGGATTCCTGAATCCTGGCCAAAGCTGCTTCAGGCTTTGAATCTGGAAGACCATGAAGACAAACAGTCTGCAGCCGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

289

Amino Acids

31.44

Weight (kDa)

6.03

Isoelectric Point (pI)

53.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012875)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 164, 485
AccB1I GGYRCC 1 cut(s) 206
AccII CGCG 1 cut(s) 18
AccIII TCCGGA 1 cut(s) 705
AciI CCGC 4 cut(s) 5, 16, 449, 861
AclWI GGATC 1 cut(s) 663
AcoI YGGCCR 1 cut(s) 803
AcsI RAATTY 2 cut(s) 82, 453
AcuI CTGAAG 3 cut(s) 290, 702, 800
AcyI GRCGYC 3 cut(s) 104, 195, 240
AdeI CACNNNGTG 1 cut(s) 647
AfaI GTAC 1 cut(s) 617
AfiI CCNNNNNNNGG 2 cut(s) 197, 737
AgsI TTSAA 3 cut(s) 13, 383, 826
AhdI GACNNNNNGTC 1 cut(s) 850
AjnI CCWGG 4 cut(s) 327, 607, 781, 800
AjuI GAANNNNNNNTTGG 2 cut(s) 117, 149
AloI GAACNNNNNNTCC 2 cut(s) 49, 81
AluBI AGCT 9 cut(s) 42, 60, 280, 310, 386, 395, 499, 658, 811
AluI AGCT 9 cut(s) 42, 60, 280, 310, 386, 395, 499, 658, 811
Alw21I GWGCWC 1 cut(s) 282
Alw26I GTCTC 2 cut(s) 141, 267
AlwI GGATC 1 cut(s) 663
Aor13HI TCCGGA 1 cut(s) 705
AoxI GGCC 2 cut(s) 573, 803
ApeKI GCWGC 6 cut(s) 35, 142, 186, 392, 811, 857
ApoI RAATTY 2 cut(s) 82, 453
ArsI GACNNNNNNTTYG 2 cut(s) 427, 459
AspS9I GGNCC 1 cut(s) 293
AsuC2I CCSGG 1 cut(s) 192
AsuHPI GGTGA 2 cut(s) 413, 605
AvaII GGWCC 1 cut(s) 293
BalI TGGCCA 1 cut(s) 805
BanI GGYRCC 1 cut(s) 206
BanII GRGCYC 1 cut(s) 282
BarI GAAGNNNNNNTAC 2 cut(s) 498, 530
BbsI GAAGAC 5 cut(s) 99, 169, 279, 840, 849
Bbv12I GWGCWC 1 cut(s) 282
BbvI GCAGC 5 cut(s) 47, 154, 173, 404, 798
BccI CCATC 1 cut(s) 593
BciT130I CCWGG 4 cut(s) 329, 609, 783, 802
BcnI CCSGG 1 cut(s) 192
BcoDI GTCTC 2 cut(s) 141, 267
BfaI CTAG 1 cut(s) 387
BfmI CTRYAG 3 cut(s) 140, 748, 855
BisI GCNGC 7 cut(s) 36, 143, 187, 393, 812, 858, 861
BlsI GCNGC 7 cut(s) 37, 144, 188, 394, 813, 859, 862
Bme1390I CCNGG 5 cut(s) 192, 329, 609, 783, 802
Bme18I GGWCC 1 cut(s) 293
BmeRI GACNNNNNGTC 1 cut(s) 850
BmgT120I GGNCC 1 cut(s) 293
BmiI GGNNCC 3 cut(s) 208, 295, 624
BmrFI CCNGG 5 cut(s) 192, 329, 609, 783, 802
BmsI GCATC 1 cut(s) 659
BpiI GAAGAC 5 cut(s) 99, 169, 279, 840, 849
BplI GAGNNNNNCTC 2 cut(s) 264, 296
BpmI CTGGAG 1 cut(s) 804
Bpu10I CCTNAGC 1 cut(s) 396
BpuEI CTTGAG 1 cut(s) 83
BpuMI CCSGG 1 cut(s) 192
BsaHI GRCGYC 3 cut(s) 104, 195, 240
BsaJI CCNNGG 5 cut(s) 181, 190, 235, 328, 529
BsaWI WCCGGW 1 cut(s) 705
BsaXI ACNNNNNCTCC 2 cut(s) 49, 79
Bsc4I CCNNNNNNNGG 2 cut(s) 197, 737
Bse118I RCCGGY 1 cut(s) 257
Bse1I ACTGG 2 cut(s) 169, 412
BseAI TCCGGA 1 cut(s) 705
BseBI CCWGG 4 cut(s) 329, 609, 783, 802
BseDI CCNNGG 5 cut(s) 181, 190, 235, 328, 529
BseGI GGATG 3 cut(s) 71, 352, 604
BseLI CCNNNNNNNGG 2 cut(s) 197, 737
BseMII CTCAG 1 cut(s) 63
BseNI ACTGG 2 cut(s) 169, 412
BseRI GAGGAG 1 cut(s) 224
BseXI GCAGC 5 cut(s) 47, 154, 173, 404, 798
BsgI GTGCAG 1 cut(s) 411
Bsh1236I CGCG 1 cut(s) 18
BshFI GGCC 2 cut(s) 575, 805
BshNI GGYRCC 1 cut(s) 206
BsiHKAI GWGCWC 1 cut(s) 282
BsiSI CCGG 3 cut(s) 192, 258, 706
BslFI GGGAC 2 cut(s) 227, 279
BslI CCNNNNNNNGG 2 cut(s) 197, 737
BsmAI GTCTC 2 cut(s) 141, 267
BsmBI CGTCTC 2 cut(s) 141, 267
BsmFI GGGAC 2 cut(s) 227, 279
BsnI GGCC 2 cut(s) 575, 805
Bsp1286I GDGCHC 1 cut(s) 282
Bsp13I TCCGGA 1 cut(s) 705
Bsp1407I TGTACA 1 cut(s) 615
Bsp143I GATC 3 cut(s) 262, 668, 775
BspACI CCGC 4 cut(s) 5, 16, 449, 861
BspANI GGCC 2 cut(s) 575, 805
BspCNI CTCAG 1 cut(s) 62
BspEI TCCGGA 1 cut(s) 705
BspFNI CGCG 1 cut(s) 18
BspLI GGNNCC 3 cut(s) 208, 295, 624
BspMAI CTGCAG 3 cut(s) 144, 752, 859
BspPI GGATC 1 cut(s) 663
BspQI GCTCTTC 1 cut(s) 309
BspT107I GGYRCC 1 cut(s) 206
BsrFI RCCGGY 1 cut(s) 257
BsrGI TGTACA 1 cut(s) 615
BsrI ACTGG 2 cut(s) 169, 412
BssAI RCCGGY 1 cut(s) 257
BssECI CCNNGG 5 cut(s) 181, 190, 235, 328, 529
BssMI GATC 3 cut(s) 262, 668, 775
BssNI GRCGYC 3 cut(s) 104, 195, 240
BssT1I CCWWGG 1 cut(s) 529
Bst2UI CCWGG 4 cut(s) 329, 609, 783, 802
Bst4CI ACNGT 2 cut(s) 425, 852
Bst6I CTCTTC 3 cut(s) 138, 309, 501
BstACI GRCGYC 3 cut(s) 104, 195, 240
BstAUI TGTACA 1 cut(s) 615
BstC8I GCNNGC 3 cut(s) 40, 312, 577
BstDEI CTNAG 2 cut(s) 49, 396
BstF5I GGATG 3 cut(s) 71, 352, 604
BstFNI CGCG 1 cut(s) 18
BstKTI GATC 3 cut(s) 265, 671, 778
BstMAI GTCTC 2 cut(s) 141, 267
BstMBI GATC 3 cut(s) 262, 668, 775
BstMWI GCNNNNNNNGC 4 cut(s) 192, 392, 518, 811
BstNI CCWGG 4 cut(s) 329, 609, 783, 802
BstNSI RCATGY 1 cut(s) 616
BstSCI CCNGG 5 cut(s) 190, 327, 607, 781, 800
BstSFI CTRYAG 3 cut(s) 140, 748, 855
BstUI CGCG 1 cut(s) 18
BstV1I GCAGC 5 cut(s) 47, 154, 173, 404, 798
BstV2I GAAGAC 5 cut(s) 99, 169, 279, 840, 849
BsuRI GGCC 2 cut(s) 575, 805
BtgZI GCGATG 2 cut(s) 103, 235
BtsCI GGATG 3 cut(s) 71, 352, 604
BtsIMutI CAGTG 2 cut(s) 176, 678
Cac8I GCNNGC 3 cut(s) 40, 312, 577
Cfr10I RCCGGY 1 cut(s) 257
Cfr13I GGNCC 1 cut(s) 293
CseI GACGC 4 cut(s) 93, 184, 229, 365
Csp6I GTAC 1 cut(s) 616
CviAII CATG 4 cut(s) 613, 619, 839, 864
CviQI GTAC 1 cut(s) 616
DdeI CTNAG 2 cut(s) 49, 396
DpnI GATC 3 cut(s) 264, 670, 777
DpnII GATC 3 cut(s) 262, 668, 775
DraIII CACNNNGTG 1 cut(s) 647
DrdI GACNNNNNNGTC 2 cut(s) 164, 485
DriI GACNNNNNGTC 1 cut(s) 850
DseDI GACNNNNNNGTC 2 cut(s) 164, 485
EaeI YGGCCR 1 cut(s) 803
Eam1104I CTCTTC 3 cut(s) 138, 309, 501
Eam1105I GACNNNNNGTC 1 cut(s) 850
EarI CTCTTC 3 cut(s) 138, 309, 501
EciI GGCGGA 1 cut(s) 464
Ecl136II GAGCTC 1 cut(s) 280
Eco130I CCWWGG 1 cut(s) 529
Eco24I GRGCYC 1 cut(s) 282
Eco47I GGWCC 1 cut(s) 293
Eco53kI GAGCTC 1 cut(s) 280
Eco57I CTGAAG 3 cut(s) 290, 702, 800
EcoICRI GAGCTC 1 cut(s) 280
EcoRII CCWGG 4 cut(s) 327, 607, 781, 800
EcoT14I CCWWGG 1 cut(s) 529
EcoT38I GRGCYC 1 cut(s) 282
ErhI CCWWGG 1 cut(s) 529
Esp3I CGTCTC 2 cut(s) 141, 267
FaeI CATG 4 cut(s) 616, 622, 842, 867
FaiI YATR 7 cut(s) 359, 614, 620, 712, 714, 840, 865
FaqI GGGAC 2 cut(s) 227, 279
FatI CATG 4 cut(s) 612, 618, 838, 863
Fnu4HI GCNGC 7 cut(s) 36, 143, 187, 393, 812, 858, 861
FokI GGATG 3 cut(s) 58, 359, 611
FriOI GRGCYC 1 cut(s) 282
Fsp4HI GCNGC 7 cut(s) 36, 143, 187, 393, 812, 858, 861
FspBI CTAG 1 cut(s) 387
GluI GCNGC 7 cut(s) 36, 143, 187, 393, 812, 858, 861
GsuI CTGGAG 1 cut(s) 804
HaeIII GGCC 2 cut(s) 575, 805
HapII CCGG 3 cut(s) 192, 258, 706
HgaI GACGC 4 cut(s) 93, 184, 229, 365
Hin1I GRCGYC 3 cut(s) 104, 195, 240
Hin1II CATG 4 cut(s) 616, 622, 842, 867
HincII GTYRAC 2 cut(s) 490, 728
HindII GTYRAC 2 cut(s) 490, 728
HindIII AAGCTT 2 cut(s) 497, 656
HinfI GANTC 5 cut(s) 702, 724, 790, 797, 826
HpaII CCGG 3 cut(s) 192, 258, 706
HphI GGTGA 2 cut(s) 413, 605
Hpy166II GTNNAC 3 cut(s) 325, 490, 728
Hpy188I TCNGA 4 cut(s) 57, 88, 346, 673
Hpy188III TCNNGA 8 cut(s) 226, 272, 380, 419, 503, 706, 794, 830
Hpy8I GTNNAC 3 cut(s) 325, 490, 728
Hpy99I CGWCG 1 cut(s) 200
HpyAV CCTTC 3 cut(s) 307, 531, 688
HpyCH4III ACNGT 2 cut(s) 425, 852
HpyCH4IV ACGT 1 cut(s) 150
HpyCH4V TGCA 7 cut(s) 142, 314, 392, 579, 650, 750, 857
HpyF10VI GCNNNNNNNGC 4 cut(s) 192, 392, 518, 811
HpyF3I CTNAG 2 cut(s) 49, 396
HpySE526I ACGT 1 cut(s) 150
Hsp92I GRCGYC 3 cut(s) 104, 195, 240
Hsp92II CATG 4 cut(s) 616, 622, 842, 867
Kpn2I TCCGGA 1 cut(s) 705
Kzo9I GATC 3 cut(s) 262, 668, 775
LguI GCTCTTC 1 cut(s) 309
LmnI GCTCC 2 cut(s) 57, 628
Lsp1109I GCAGC 5 cut(s) 47, 154, 173, 404, 798
LweI GCATC 1 cut(s) 659
MaeI CTAG 1 cut(s) 387
MaeII ACGT 1 cut(s) 150
MaeIII GTNAC 1 cut(s) 466
MalI GATC 3 cut(s) 264, 670, 777
MboI GATC 3 cut(s) 262, 668, 775
MhlI GDGCHC 1 cut(s) 282
MlsI TGGCCA 1 cut(s) 805
MluCI AATT 5 cut(s) 82, 335, 453, 562, 761
MluNI TGGCCA 1 cut(s) 805
MlyI GAGTC 2 cut(s) 696, 733
Mox20I TGGCCA 1 cut(s) 805
MroI TCCGGA 1 cut(s) 705
MscI TGGCCA 1 cut(s) 805
MseI TTAA 4 cut(s) 23, 29, 153, 588
MslI CAYNNNNRTG 1 cut(s) 617
Msp20I TGGCCA 1 cut(s) 805
MspI CCGG 3 cut(s) 192, 258, 706
MspR9I CCNGG 5 cut(s) 192, 329, 609, 783, 802
MvaI CCWGG 4 cut(s) 329, 609, 783, 802
MvnI CGCG 1 cut(s) 18
MwoI GCNNNNNNNGC 4 cut(s) 192, 392, 518, 811
NciI CCSGG 1 cut(s) 192
NdeII GATC 3 cut(s) 262, 668, 775
NlaIII CATG 4 cut(s) 616, 622, 842, 867
NlaIV GGNNCC 3 cut(s) 208, 295, 624
NmeAIII GCCGAG 2 cut(s) 162, 216
NspI RCATGY 1 cut(s) 616
PciSI GCTCTTC 1 cut(s) 309
PcsI WCGNNNNNNNCGW 4 cut(s) 61, 258, 273, 439
PfeI GAWTC 3 cut(s) 790, 797, 826
PfoI TCCNGGA 1 cut(s) 781
PkrI GCNGC 7 cut(s) 37, 144, 188, 394, 813, 859, 862
PleI GAGTC 2 cut(s) 696, 732
PpsI GAGTC 2 cut(s) 696, 732
Psp124BI GAGCTC 1 cut(s) 282
Psp6I CCWGG 4 cut(s) 327, 607, 781, 800
PspGI CCWGG 4 cut(s) 327, 607, 781, 800
PspN4I GGNNCC 3 cut(s) 208, 295, 624
PspPI GGNCC 1 cut(s) 293
PstI CTGCAG 3 cut(s) 144, 752, 859
RsaI GTAC 1 cut(s) 617
RsaNI GTAC 1 cut(s) 616
RseI CAYNNNNRTG 1 cut(s) 617
SacI GAGCTC 1 cut(s) 282
SapI GCTCTTC 1 cut(s) 309
SaqAI TTAA 4 cut(s) 23, 29, 153, 588
SatI GCNGC 7 cut(s) 36, 143, 187, 393, 812, 858, 861
Sau3AI GATC 3 cut(s) 262, 668, 775
Sau96I GGNCC 1 cut(s) 293
SchI GAGTC 2 cut(s) 696, 733
ScrFI CCNGG 5 cut(s) 192, 329, 609, 783, 802
SduI GDGCHC 1 cut(s) 282
SfaNI GCATC 1 cut(s) 659
SfcI CTRYAG 3 cut(s) 140, 748, 855
SgrAI CRCCGGYG 1 cut(s) 257
SinI GGWCC 1 cut(s) 293
SmiMI CAYNNNNRTG 1 cut(s) 617
SmlI CTYRAG 1 cut(s) 98
SmoI CTYRAG 1 cut(s) 98
Sse9I AATT 5 cut(s) 82, 335, 453, 562, 761
SsiI CCGC 4 cut(s) 5, 16, 449, 861
SspMI CTAG 1 cut(s) 387
SstI GAGCTC 1 cut(s) 282
StyD4I CCNGG 5 cut(s) 190, 327, 607, 781, 800
StyI CCWWGG 1 cut(s) 529
TaaI ACNGT 2 cut(s) 425, 852
TaiI ACGT 1 cut(s) 153
TaqI TCGA 4 cut(s) 227, 271, 433, 754
TasI AATT 5 cut(s) 82, 335, 453, 562, 761
TatI WGTACW 1 cut(s) 615
TauI GCSGC 1 cut(s) 863
TfiI GAWTC 3 cut(s) 790, 797, 826
Tru1I TTAA 4 cut(s) 23, 29, 153, 588
Tru9I TTAA 4 cut(s) 23, 29, 153, 588
TscAI CASTG 2 cut(s) 176, 685
TseI GCWGC 6 cut(s) 35, 142, 186, 392, 811, 857
TspDTI ATGAA 3 cut(s) 57, 403, 855
TspGWI ACGGA 1 cut(s) 53
TspRI CASTG 2 cut(s) 176, 685
VpaK11BI GGWCC 1 cut(s) 293
XapI RAATTY 2 cut(s) 82, 453
XceI RCATGY 1 cut(s) 616
XspI CTAG 1 cut(s) 387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.