pycom07g17490

Belongs to the adenylate kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0012875
Physical Location & Seq
Forward (+)
20047407 .. 20049213
1807 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g17490.3

Sequence Viewer

Length: 1095 bp
ATGCCGACAGATTCCAACAGAAAACAGAACATGTTTCACATGCGTACTTTTTTGACATTCGCAATCGCGGAGCACACTAGATTTTTTTGTAAAACTCACAACGTAATTAATCCACGCTCCCTCTCACTCTCCCTCTCCCCCTCCCCAAACTACCTAAGCCTCTCTCTCCTCCCTTTCTCCCTCTCTCTCTGCAACTCAAAAGTAAAAAAAGACTTTCTGGTCCGTCCCATGGCGGTTCTGAACCGCGTTCTGAGATCACGACGACCGGGAAGCTTCTTCTCACTCCGAAGCTTCCGCTCTTCGTCTTTTCTAAATTCCGAAACTGACCTCAAAGCGTCTGCCTCCGTCATCCCAAAGCCCCTTCCCCTGCATCGCGACGTCAACGACAGGAATGTCCAGTGGGTCTTCCTCGGCTGCCCCGGCGTTGGAAAAGGCACCTACGCCTCCCGCCTCTGCCACCTCCTCGGCGTCCCTCACATCGCCACCGGCGATCTCGTCCGCGACGAGCTCGCTGCCTCCGGCCCCTTGGCTCTTCAGCTTGCGGAGGTTGTGAATCAGGGGAAATTGGTTTCGGATGAGATTATAATAAACTTGTTGTCCAAGCGTCTTGAGGCTAGTGCAGCTAAGGGTGAAACTGGCTTCATTCTTGACGGTTTTCCGAGGACGATTCGACAGGCGGAAATTTTGGAGGGAGTGACAGACATTGACTTGGTTGTCAACCTAAAGCTTCGCGAAGAGGCTTTGCTTGCGAAGTGTCTTGGAAGGAGGATTTGTAGTGAGTGTGGAGGTAATTATAATGTTGCCTCCATTCACATTAAGGCCGAGGATGGGAACCCTGGCATGTACATGGCTCCACTTCTTCCCCCTCCACAATGTGCATTAAAGCTGATCACGAGATCCGATGACACTGAAGAAGTTGTTAAGGAGCGACTTCGTATATACAATGATATGAGTCAACCCGTGGAGGAGTTCTACCGAAGTCGGGGAAAATTGTTAGAGTTTGATCTTCCCGGAGGGATTCCCGAATCCTGGCCAAAGCTACTTCAGGCTTTGAATCTGGAAGACCCTGAAGACAAATGGTCTGCAGCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130
Pfam Domains
Protein Families
ADK

Protein Analysis

365

Amino Acids

40.47

Weight (kDa)

8.72

Isoelectric Point (pI)

55.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012875)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39270
fragaria_vesca FvH4_7g20530
malus_domestica MD01G1114300.v1.1 MD07G1182200.v1.1
prunus_persica Prupe.2G220900_v2.0.a1
pyrus_communis pycom01g14330 pycom07g17490
rosa_chinensis RchiOBHm_Chr1g0364421
rosa_laevigata RLG00000027481
rosa_multiflora Rmu_sc0001342.1_g000005
rosa_roxburghii Rroxscaffold_4G00292290
rosa_rugosa Rorug01G0316000 Rorug01G0316000
rosa_samantha Rh1AG324300 Rh1BG287000 Rh1CG303600 Rh1DG318500
rosa_wichuraiana Rw1G028740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 584, 795
AasI GACNNNNNNGTC 3 cut(s) 218, 392, 713
AatII GACGTC 1 cut(s) 381
AccB1I GGYRCC 1 cut(s) 434
AccBSI CCGCTC 1 cut(s) 297
AccII CGCG 5 cut(s) 68, 246, 375, 501, 732
AciI CCGC 8 cut(s) 68, 233, 244, 295, 448, 499, 542, 677
AclWI GGATC 1 cut(s) 891
AcoI YGGCCR 1 cut(s) 1031
AcsI RAATTY 2 cut(s) 313, 681
AcuI CTGAAG 4 cut(s) 518, 930, 1028, 1089
AcyI GRCGYC 2 cut(s) 378, 468
AdeI CACNNNGTG 1 cut(s) 875
AfaI GTAC 2 cut(s) 46, 845
AfiI CCNNNNNNNGG 5 cut(s) 229, 425, 828, 982, 1029
AflIII ACRYGT 1 cut(s) 30
AgsI TTSAA 1 cut(s) 1054
AhdI GACNNNNNGTC 1 cut(s) 1078
AjnI CCWGG 2 cut(s) 835, 1028
AluBI AGCT 8 cut(s) 273, 291, 508, 538, 623, 727, 886, 1039
AluI AGCT 8 cut(s) 273, 291, 508, 538, 623, 727, 886, 1039
Alw21I GWGCWC 2 cut(s) 75, 510
AlwI GGATC 1 cut(s) 891
AoxI GGCC 3 cut(s) 520, 819, 1031
ApeKI GCWGC 5 cut(s) 414, 512, 620, 1085, 1088
ApoI RAATTY 2 cut(s) 313, 681
AseI ATTAAT 1 cut(s) 108
AspS9I GGNCC 2 cut(s) 220, 521
AsuC2I CCSGG 3 cut(s) 267, 420, 1011
AsuHPI GGTGA 1 cut(s) 641
AvaII GGWCC 1 cut(s) 220
BalI TGGCCA 1 cut(s) 1033
BanI GGYRCC 1 cut(s) 434
BanII GRGCYC 1 cut(s) 510
BauI CACGAG 1 cut(s) 892
BbsI GAAGAC 3 cut(s) 397, 1068, 1077
Bbv12I GWGCWC 2 cut(s) 75, 510
BbvI GCAGC 3 cut(s) 401, 499, 632
BccI CCATC 1 cut(s) 821
BcgI CGANNNNNNTGC 2 cut(s) 494, 528
BciT130I CCWGG 2 cut(s) 837, 1030
BclI TGATCA 1 cut(s) 888
BcnI CCSGG 3 cut(s) 267, 420, 1011
BfaI CTAG 2 cut(s) 78, 615
BfmI CTRYAG 1 cut(s) 1083
BisI GCNGC 5 cut(s) 415, 513, 621, 1086, 1089
BlsI GCNGC 5 cut(s) 416, 514, 622, 1087, 1090
Bme1390I CCNGG 5 cut(s) 267, 420, 837, 1011, 1030
Bme18I GGWCC 1 cut(s) 220
BmeRI GACNNNNNGTC 1 cut(s) 1078
BmgT120I GGNCC 2 cut(s) 220, 521
BmiI GGNNCC 4 cut(s) 436, 523, 833, 852
BmrFI CCNGG 5 cut(s) 267, 420, 837, 1011, 1030
BmsI GCATC 1 cut(s) 379
BpiI GAAGAC 3 cut(s) 397, 1068, 1077
Bpu10I CCTNAGC 2 cut(s) 155, 624
BpuEI CTTGAG 1 cut(s) 629
BpuMI CCSGG 3 cut(s) 267, 420, 1011
BsaHI GRCGYC 2 cut(s) 378, 468
BsaJI CCNNGG 9 cut(s) 228, 409, 418, 463, 525, 659, 822, 835, 960
BsaXI ACNNNNNCTCC 2 cut(s) 757, 787
Bsc4I CCNNNNNNNGG 5 cut(s) 229, 425, 828, 982, 1029
Bse118I RCCGGY 1 cut(s) 485
Bse1I ACTGG 2 cut(s) 397, 640
BseBI CCWGG 2 cut(s) 837, 1030
BseDI CCNNGG 9 cut(s) 228, 409, 418, 463, 525, 659, 822, 835, 960
BseGI GGATG 3 cut(s) 348, 580, 832
BseLI CCNNNNNNNGG 5 cut(s) 229, 425, 828, 982, 1029
BseMII CTCAG 1 cut(s) 242
BseNI ACTGG 2 cut(s) 397, 640
BseRI GAGGAG 3 cut(s) 158, 452, 980
BseXI GCAGC 3 cut(s) 401, 499, 632
BsgI GTGCAG 1 cut(s) 639
Bsh1236I CGCG 5 cut(s) 68, 246, 375, 501, 732
Bsh1285I CGRYCG 1 cut(s) 266
BshFI GGCC 3 cut(s) 522, 821, 1033
BshNI GGYRCC 1 cut(s) 434
BsiEI CGRYCG 1 cut(s) 266
BsiHKAI GWGCWC 2 cut(s) 75, 510
BsiSI CCGG 5 cut(s) 266, 420, 486, 519, 1011
BslFI GGGAC 2 cut(s) 210, 455
BslI CCNNNNNNNGG 5 cut(s) 229, 425, 828, 982, 1029
BsmFI GGGAC 2 cut(s) 210, 455
BsnI GGCC 3 cut(s) 522, 821, 1033
Bsp1286I GDGCHC 2 cut(s) 75, 510
Bsp1407I TGTACA 1 cut(s) 843
Bsp143I GATC 5 cut(s) 254, 490, 888, 896, 1003
Bsp19I CCATGG 1 cut(s) 228
Bsp68I TCGCGA 2 cut(s) 375, 732
BspACI CCGC 8 cut(s) 68, 233, 244, 295, 448, 499, 542, 677
BspANI GGCC 3 cut(s) 522, 821, 1033
BspCNI CTCAG 1 cut(s) 243
BspFNI CGCG 5 cut(s) 68, 246, 375, 501, 732
BspLI GGNNCC 4 cut(s) 436, 523, 833, 852
BspMAI CTGCAG 1 cut(s) 1087
BspPI GGATC 1 cut(s) 891
BspQI GCTCTTC 2 cut(s) 304, 537
BspT107I GGYRCC 1 cut(s) 434
BsrBI CCGCTC 1 cut(s) 297
BsrFI RCCGGY 1 cut(s) 485
BsrGI TGTACA 1 cut(s) 843
BsrI ACTGG 2 cut(s) 397, 640
BssAI RCCGGY 1 cut(s) 485
BssECI CCNNGG 9 cut(s) 228, 409, 418, 463, 525, 659, 822, 835, 960
BssMI GATC 5 cut(s) 254, 490, 888, 896, 1003
BssNI GRCGYC 2 cut(s) 378, 468
BssSI CACGAG 1 cut(s) 892
BssT1I CCWWGG 2 cut(s) 228, 525
Bst2BI CACGAG 1 cut(s) 892
Bst2UI CCWGG 2 cut(s) 837, 1030
Bst4CI ACNGT 1 cut(s) 653
Bst6I CTCTTC 3 cut(s) 304, 537, 729
BstACI GRCGYC 2 cut(s) 378, 468
BstAUI TGTACA 1 cut(s) 843
BstC8I GCNNGC 3 cut(s) 510, 540, 747
BstDEI CTNAG 3 cut(s) 155, 251, 624
BstDSI CCRYGG 2 cut(s) 228, 960
BstF5I GGATG 3 cut(s) 348, 580, 832
BstFNI CGCG 5 cut(s) 68, 246, 375, 501, 732
BstKTI GATC 5 cut(s) 257, 493, 891, 899, 1006
BstMBI GATC 5 cut(s) 254, 490, 888, 896, 1003
BstMCI CGRYCG 1 cut(s) 266
BstMWI GCNNNNNNNGC 3 cut(s) 420, 620, 746
BstNI CCWGG 2 cut(s) 837, 1030
BstNSI RCATGY 3 cut(s) 34, 43, 844
BstSCI CCNGG 5 cut(s) 265, 418, 835, 1009, 1028
BstSFI CTRYAG 1 cut(s) 1083
BstUI CGCG 5 cut(s) 68, 246, 375, 501, 732
BstV1I GCAGC 3 cut(s) 401, 499, 632
BstV2I GAAGAC 3 cut(s) 397, 1068, 1077
BstX2I RGATCY 1 cut(s) 896
BstYI RGATCY 1 cut(s) 896
BsuRI GGCC 3 cut(s) 522, 821, 1033
BtgI CCRYGG 2 cut(s) 228, 960
BtgZI GCGATG 2 cut(s) 356, 463
BtsCI GGATG 3 cut(s) 348, 580, 832
BtsIMutI CAGTG 2 cut(s) 404, 906
BtuMI TCGCGA 2 cut(s) 375, 732
Cac8I GCNNGC 3 cut(s) 510, 540, 747
Cfr10I RCCGGY 1 cut(s) 485
Cfr13I GGNCC 2 cut(s) 220, 521
CseI GACGC 3 cut(s) 324, 457, 593
Csp6I GTAC 2 cut(s) 45, 844
CviAII CATG 6 cut(s) 31, 40, 229, 841, 847, 1092
CviQI GTAC 2 cut(s) 45, 844
DdeI CTNAG 3 cut(s) 155, 251, 624
DpnI GATC 5 cut(s) 256, 492, 890, 898, 1005
DpnII GATC 5 cut(s) 254, 490, 888, 896, 1003
DraIII CACNNNGTG 1 cut(s) 875
DrdI GACNNNNNNGTC 3 cut(s) 218, 392, 713
DriI GACNNNNNGTC 1 cut(s) 1078
DseDI GACNNNNNNGTC 3 cut(s) 218, 392, 713
EaeI YGGCCR 1 cut(s) 1031
Eam1104I CTCTTC 3 cut(s) 304, 537, 729
Eam1105I GACNNNNNGTC 1 cut(s) 1078
EarI CTCTTC 3 cut(s) 304, 537, 729
EciI GGCGGA 1 cut(s) 692
Ecl136II GAGCTC 1 cut(s) 508
Eco130I CCWWGG 2 cut(s) 228, 525
Eco24I GRGCYC 1 cut(s) 510
Eco47I GGWCC 1 cut(s) 220
Eco53kI GAGCTC 1 cut(s) 508
Eco57I CTGAAG 4 cut(s) 518, 930, 1028, 1089
EcoICRI GAGCTC 1 cut(s) 508
EcoRII CCWGG 2 cut(s) 835, 1028
EcoT14I CCWWGG 2 cut(s) 228, 525
EcoT38I GRGCYC 1 cut(s) 510
ErhI CCWWGG 2 cut(s) 228, 525
FaeI CATG 6 cut(s) 34, 43, 232, 844, 850, 1095
FaqI GGGAC 2 cut(s) 210, 455
FatI CATG 6 cut(s) 30, 39, 228, 840, 846, 1091
FauI CCCGC 1 cut(s) 455
FbaI TGATCA 1 cut(s) 888
Fnu4HI GCNGC 5 cut(s) 415, 513, 621, 1086, 1089
FokI GGATG 3 cut(s) 335, 587, 839
FriOI GRGCYC 1 cut(s) 510
Fsp4HI GCNGC 5 cut(s) 415, 513, 621, 1086, 1089
FspBI CTAG 2 cut(s) 78, 615
GluI GCNGC 5 cut(s) 415, 513, 621, 1086, 1089
HaeIII GGCC 3 cut(s) 522, 821, 1033
HapII CCGG 5 cut(s) 266, 420, 486, 519, 1011
HgaI GACGC 3 cut(s) 324, 457, 593
Hin1I GRCGYC 2 cut(s) 378, 468
Hin1II CATG 6 cut(s) 34, 43, 232, 844, 850, 1095
HincII GTYRAC 3 cut(s) 382, 718, 956
HindII GTYRAC 3 cut(s) 382, 718, 956
HindIII AAGCTT 3 cut(s) 271, 289, 725
HinfI GANTC 7 cut(s) 11, 553, 667, 952, 1018, 1025, 1054
HpaII CCGG 5 cut(s) 266, 420, 486, 519, 1011
HphI GGTGA 1 cut(s) 641
Hpy166II GTNNAC 3 cut(s) 382, 718, 956
Hpy188I TCNGA 7 cut(s) 240, 252, 287, 319, 574, 660, 901
Hpy188III TCNNGA 8 cut(s) 258, 374, 608, 647, 731, 892, 1022, 1058
Hpy8I GTNNAC 3 cut(s) 382, 718, 956
Hpy99I CGWCG 3 cut(s) 264, 380, 506
HpyAV CCTTC 2 cut(s) 371, 756
HpyCH4III ACNGT 1 cut(s) 653
HpyCH4IV ACGT 2 cut(s) 102, 378
HpyCH4V TGCA 5 cut(s) 192, 370, 620, 878, 1085
HpyF10VI GCNNNNNNNGC 3 cut(s) 420, 620, 746
HpyF3I CTNAG 3 cut(s) 155, 251, 624
HpySE526I ACGT 2 cut(s) 102, 378
Hsp92I GRCGYC 2 cut(s) 378, 468
Hsp92II CATG 6 cut(s) 34, 43, 232, 844, 850, 1095
Ksp22I TGATCA 1 cut(s) 888
Kzo9I GATC 5 cut(s) 254, 490, 888, 896, 1003
LguI GCTCTTC 2 cut(s) 304, 537
LmnI GCTCC 4 cut(s) 70, 122, 856, 925
Lsp1109I GCAGC 3 cut(s) 401, 499, 632
LweI GCATC 1 cut(s) 379
MaeI CTAG 2 cut(s) 78, 615
MaeII ACGT 2 cut(s) 102, 378
MaeIII GTNAC 1 cut(s) 694
MalI GATC 5 cut(s) 256, 492, 890, 898, 1005
MbiI CCGCTC 1 cut(s) 297
MboI GATC 5 cut(s) 254, 490, 888, 896, 1003
MflI RGATCY 1 cut(s) 896
MhlI GDGCHC 2 cut(s) 75, 510
MlsI TGGCCA 1 cut(s) 1033
MluCI AATT 6 cut(s) 105, 313, 563, 681, 790, 989
MluNI TGGCCA 1 cut(s) 1033
MlyI GAGTC 1 cut(s) 961
MmeI TCCRAC 2 cut(s) 39, 406
Mox20I TGGCCA 1 cut(s) 1033
MscI TGGCCA 1 cut(s) 1033
MseI TTAA 4 cut(s) 108, 816, 881, 921
MslI CAYNNNNRTG 1 cut(s) 845
Msp20I TGGCCA 1 cut(s) 1033
MspI CCGG 5 cut(s) 266, 420, 486, 519, 1011
MspR9I CCNGG 5 cut(s) 267, 420, 837, 1011, 1030
MvaI CCWGG 2 cut(s) 837, 1030
MvnI CGCG 5 cut(s) 68, 246, 375, 501, 732
MwoI GCNNNNNNNGC 3 cut(s) 420, 620, 746
NciI CCSGG 3 cut(s) 267, 420, 1011
NcoI CCATGG 1 cut(s) 228
NdeII GATC 5 cut(s) 254, 490, 888, 896, 1003
NlaIII CATG 6 cut(s) 34, 43, 232, 844, 850, 1095
NlaIV GGNNCC 4 cut(s) 436, 523, 833, 852
NmeAIII GCCGAG 3 cut(s) 390, 444, 847
NmuCI GTSAC 1 cut(s) 694
NruI TCGCGA 2 cut(s) 375, 732
NspI RCATGY 3 cut(s) 34, 43, 844
PciI ACATGT 1 cut(s) 30
PciSI GCTCTTC 2 cut(s) 304, 537
PcsI WCGNNNNNNNCGW 2 cut(s) 486, 501
PfeI GAWTC 6 cut(s) 11, 553, 667, 1018, 1025, 1054
PfoI TCCNGGA 1 cut(s) 1009
PkrI GCNGC 5 cut(s) 416, 514, 622, 1087, 1090
PleI GAGTC 1 cut(s) 960
PpsI GAGTC 1 cut(s) 960
PscI ACATGT 1 cut(s) 30
PshBI ATTAAT 1 cut(s) 108
PsiI TTATAA 2 cut(s) 584, 795
Psp124BI GAGCTC 1 cut(s) 510
Psp6I CCWGG 2 cut(s) 835, 1028
PspGI CCWGG 2 cut(s) 835, 1028
PspN4I GGNNCC 4 cut(s) 436, 523, 833, 852
PspPI GGNCC 2 cut(s) 220, 521
PstI CTGCAG 1 cut(s) 1087
PsuI RGATCY 1 cut(s) 896
RruI TCGCGA 2 cut(s) 375, 732
RsaI GTAC 2 cut(s) 46, 845
RsaNI GTAC 2 cut(s) 45, 844
RseI CAYNNNNRTG 1 cut(s) 845
SacI GAGCTC 1 cut(s) 510
SapI GCTCTTC 2 cut(s) 304, 537
SaqAI TTAA 4 cut(s) 108, 816, 881, 921
SatI GCNGC 5 cut(s) 415, 513, 621, 1086, 1089
Sau3AI GATC 5 cut(s) 254, 490, 888, 896, 1003
Sau96I GGNCC 2 cut(s) 220, 521
SchI GAGTC 1 cut(s) 961
ScrFI CCNGG 5 cut(s) 267, 420, 837, 1011, 1030
SduI GDGCHC 2 cut(s) 75, 510
SfaNI GCATC 1 cut(s) 379
SfcI CTRYAG 1 cut(s) 1083
SgrAI CRCCGGYG 1 cut(s) 485
SinI GGWCC 1 cut(s) 220
SmiMI CAYNNNNRTG 1 cut(s) 845
SmlI CTYRAG 1 cut(s) 608
SmoI CTYRAG 1 cut(s) 608
Sse9I AATT 6 cut(s) 105, 313, 563, 681, 790, 989
SsiI CCGC 8 cut(s) 68, 233, 244, 295, 448, 499, 542, 677
SspMI CTAG 2 cut(s) 78, 615
SstI GAGCTC 1 cut(s) 510
StyD4I CCNGG 5 cut(s) 265, 418, 835, 1009, 1028
StyI CCWWGG 2 cut(s) 228, 525
TaaI ACNGT 1 cut(s) 653
TaiI ACGT 2 cut(s) 105, 381
TaqI TCGA 1 cut(s) 670
TasI AATT 6 cut(s) 105, 313, 563, 681, 790, 989
TatI WGTACW 1 cut(s) 843
TfiI GAWTC 6 cut(s) 11, 553, 667, 1018, 1025, 1054
Tru1I TTAA 4 cut(s) 108, 816, 881, 921
Tru9I TTAA 4 cut(s) 108, 816, 881, 921
TscAI CASTG 2 cut(s) 404, 913
TseFI GTSAC 1 cut(s) 694
TseI GCWGC 5 cut(s) 414, 512, 620, 1085, 1088
Tsp45I GTSAC 1 cut(s) 694
TspDTI ATGAA 1 cut(s) 631
TspGWI ACGGA 2 cut(s) 212, 334
TspRI CASTG 2 cut(s) 404, 913
VpaK11BI GGWCC 1 cut(s) 220
VspI ATTAAT 1 cut(s) 108
XapI RAATTY 2 cut(s) 313, 681
XceI RCATGY 3 cut(s) 34, 43, 844
XspI CTAG 2 cut(s) 78, 615
ZraI GACGTC 1 cut(s) 379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.