Prupe.2G227200_v2.0.a1

Plant protein 1589 of unknown function (A_thal_3526)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
25313758 .. 25315422
1665 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G227200.1

Sequence Viewer

Length: 285 bp
ATGGGAGATTCTTCATCAGCATCGTACATACACATGGTGCAGCACCTGATAGAGAAGTGCCTGATCTACCACATGAGTAAAGAAGAGTGCATGGAAGCTCTGTCTAAGCATGCAAACATCGAGCCTGTCATCACCTCCACCGTTTGGAATGAACTGGAGAAAGTGAACAAGGAGTTCTTCGAGGCGTATGCACAGTCTCAAAACAAAGGAGATCGAATGTCAGAGGAAGAGACAAGCCAATTGATCCAAAAGATGATATCGGATTCCAAAGATTCCGACGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

95

Amino Acids

10.8

Weight (kDa)

4.77

Isoelectric Point (pI)

91.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 144
AclWI GGATC 1 cut(s) 238
AdeI CACNNNGTG 1 cut(s) 37
AfaI GTAC 1 cut(s) 26
AfiI CCNNNNNNNGG 1 cut(s) 144
AluBI AGCT 1 cut(s) 98
AluI AGCT 1 cut(s) 98
Alw26I GTCTC 2 cut(s) 201, 224
AlwI GGATC 1 cut(s) 238
AlwNI CAGNNNCTG 1 cut(s) 46
ApeKI GCWGC 1 cut(s) 40
AsuHPI GGTGA 1 cut(s) 124
BbvI GCAGC 1 cut(s) 52
BcgI CGANNNNNNTGC 2 cut(s) 170, 204
BcoDI GTCTC 2 cut(s) 201, 224
BfaI CTAG 1 cut(s) 283
BisI GCNGC 1 cut(s) 41
BlsI GCNGC 1 cut(s) 42
BmsI GCATC 1 cut(s) 29
BpmI CTGGAG 1 cut(s) 176
Bsc4I CCNNNNNNNGG 1 cut(s) 144
Bse1I ACTGG 1 cut(s) 159
BseLI CCNNNNNNNGG 1 cut(s) 144
BseNI ACTGG 1 cut(s) 159
BseXI GCAGC 1 cut(s) 52
BsgI GTGCAG 1 cut(s) 59
BslI CCNNNNNNNGG 1 cut(s) 144
BsmAI GTCTC 2 cut(s) 201, 224
Bsp143I GATC 3 cut(s) 63, 211, 243
BspPI GGATC 1 cut(s) 238
BsrI ACTGG 1 cut(s) 159
BssMI GATC 3 cut(s) 63, 211, 243
Bst4CI ACNGT 2 cut(s) 142, 195
Bst6I CTCTTC 2 cut(s) 78, 222
BstC8I GCNNGC 1 cut(s) 111
BstDEI CTNAG 1 cut(s) 105
BstKTI GATC 3 cut(s) 66, 214, 246
BstMAI GTCTC 2 cut(s) 201, 224
BstMBI GATC 3 cut(s) 63, 211, 243
BstNSI RCATGY 1 cut(s) 113
BstV1I GCAGC 1 cut(s) 52
Cac8I GCNNGC 1 cut(s) 111
CaiI CAGNNNCTG 1 cut(s) 46
Csp6I GTAC 1 cut(s) 25
CviAII CATG 4 cut(s) 34, 73, 91, 110
CviJI RGCY 3 cut(s) 98, 124, 237
CviKI_1 RGCY 3 cut(s) 98, 124, 237
CviQI GTAC 1 cut(s) 25
DdeI CTNAG 1 cut(s) 105
DpnI GATC 3 cut(s) 65, 213, 245
DpnII GATC 3 cut(s) 63, 211, 243
DraIII CACNNNGTG 1 cut(s) 37
Eam1104I CTCTTC 2 cut(s) 78, 222
EarI CTCTTC 2 cut(s) 78, 222
Eco32I GATATC 1 cut(s) 258
EcoRV GATATC 1 cut(s) 258
FaeI CATG 4 cut(s) 37, 76, 94, 113
FaiI YATR 6 cut(s) 29, 35, 74, 92, 111, 189
FalI AAGNNNNNCTT 2 cut(s) 161, 193
FatI CATG 4 cut(s) 33, 72, 90, 109
Fnu4HI GCNGC 1 cut(s) 41
Fsp4HI GCNGC 1 cut(s) 41
FspBI CTAG 1 cut(s) 283
GluI GCNGC 1 cut(s) 41
GsuI CTGGAG 1 cut(s) 176
Hin1II CATG 4 cut(s) 37, 76, 94, 113
HinfI GANTC 3 cut(s) 8, 263, 272
HphI GGTGA 1 cut(s) 124
Hpy166II GTNNAC 1 cut(s) 166
Hpy188I TCNGA 3 cut(s) 223, 262, 277
Hpy8I GTNNAC 1 cut(s) 166
Hpy99I CGWCG 1 cut(s) 281
HpyCH4III ACNGT 2 cut(s) 142, 195
HpyCH4V TGCA 4 cut(s) 40, 90, 113, 191
HpyF3I CTNAG 1 cut(s) 105
Hsp92II CATG 4 cut(s) 37, 76, 94, 113
Kzo9I GATC 3 cut(s) 63, 211, 243
LpnPI CCDG 4 cut(s) 59, 74, 138, 140
Lsp1109I GCAGC 1 cut(s) 52
LweI GCATC 1 cut(s) 29
MaeI CTAG 1 cut(s) 283
MalI GATC 3 cut(s) 65, 213, 245
MboI GATC 3 cut(s) 63, 211, 243
MboII GAAGA 4 cut(s) 3, 95, 169, 239
MfeI CAATTG 1 cut(s) 239
MluCI AATT 1 cut(s) 239
MnlI CCTC 3 cut(s) 145, 175, 217
MslI CAYNNNNRTG 1 cut(s) 32
MunI CAATTG 1 cut(s) 239
NdeII GATC 3 cut(s) 63, 211, 243
NlaIII CATG 4 cut(s) 37, 76, 94, 113
NspI RCATGY 1 cut(s) 113
PaeI GCATGC 1 cut(s) 113
PfeI GAWTC 3 cut(s) 8, 263, 272
PflMI CCANNNNNTGG 1 cut(s) 144
PkrI GCNGC 1 cut(s) 42
PstNI CAGNNNCTG 1 cut(s) 46
RsaI GTAC 1 cut(s) 26
RsaNI GTAC 1 cut(s) 25
RseI CAYNNNNRTG 1 cut(s) 32
SatI GCNGC 1 cut(s) 41
Sau3AI GATC 3 cut(s) 63, 211, 243
SetI ASST 3 cut(s) 48, 100, 137
SfaNI GCATC 1 cut(s) 29
SmiMI CAYNNNNRTG 1 cut(s) 32
SphI GCATGC 1 cut(s) 113
Sse9I AATT 1 cut(s) 239
SspMI CTAG 1 cut(s) 283
TaaI ACNGT 2 cut(s) 142, 195
TaqI TCGA 3 cut(s) 120, 180, 214
TasI AATT 1 cut(s) 239
TfiI GAWTC 3 cut(s) 8, 263, 272
TseI GCWGC 1 cut(s) 40
TspDTI ATGAA 1 cut(s) 165
Van91I CCANNNNNTGG 1 cut(s) 144
XceI RCATGY 1 cut(s) 113
XspI CTAG 1 cut(s) 283
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.