Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0008393

Physical Location & Seq

Genomic Coordinates Reverse (-)

26062268 .. 26067767

Gene Structure 5500 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G241200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2400 bp

ATGAATATGAATTCAGGTTTGGATCCATCGATGGCGTTACTGGCAGCAAGTGGAGGTGACACTGTCAAGCTCTTTGATGTCTCGGTCAAGTCCGGCGATCCCTGCGTTTTGAGCTACACTCCTTCTCCTGGCTCCCATGTCAATTCGCTTAAGTGGAACCACACCAATTTGGTGGTGGCTAGTGCTGGAGATGATAAGAAGATATCCTTGTGGAATAAGAATGGGAAGAGCATGGGCACCATTCCAATGGCTGGAACCGACAGTGGAGACAACATTGAGGAGTCTATATTGGCTCTCAGCTTCAGTAACAAGGTTTCTAGATACATATGTTCTGGTGGAAGTGGTCAGGTTGTAAGAATATGGGATTTGCAAAGAAAGCGCTGTATTAAATGGTTGAGGGGTCATTCTAGTACAATTACGGGTGCAATGTACAATTGCAAAGATGAGCACTTAGCTTCCATTAGTGTCGATGGGGATTTAATACTTCACAACCTTACATCTGGTGCAAGGACTGCTGAACTCAAGGACCCTAATGGACAGGTACTAAGAGTGCTTGACTATTCCCGGATTAGCCGACACCTTTTGGTGACAGCAGGTGATGATGGGTCTGCACATTTGTGGGACACAACCGGTCGTAGCCCAAAGGTTTCTTGGTTGAAGCAGCATTCTGCGCCAACTGCTGGTATCAGTTTCTCACCATCTAATGACAAGATGATTGCTACTGTTGGGCTTGATAAGAAGTTGTATACTTACGACTCAGGGTCTAGACGACATTCATCTTGTATTTCCTATGAGGCACCTTTCTCTTCATTGGCATTTAGAGATGATGGCTGGGTACTGGCAGCTGGAACAAGCAGTGGTCGTGTGGTGTTCTATGATGTCCGTGGTAAACCAGAACCTTTCACCGTTCTTCGTGCTTATAGTAGTTCAGAGGCTGTTACAAGTCTATGCTGGCAAAGGTCAAAACCTGTCCTTGTAAACGAAAGCAATTGTACTGTCGAGACCGCTCTTTTAGGAGATGCTGTTGAAGATTCAATACTTATGCCTGACCCGCTTCCTTCTGTGACCTCATCAAGCCTTCCTCTATCTATGGGAGTATCTAGTTCTCGAAATCCAGGCCGTTCAAGTTTATCTGCGGAGACATCTTCAGTTACAGCAGCTGGCAGTGGATTTACTTCAAGCACACTTCATGTATCTACTGCAGAGGAGACACCACATCGAGGCCATTTATGGCCAGGTGGAACATTGTCTAGATTGCATGCTCCTCGATCTACTTATAACTTCAAGGATGATATGGAGGTGTTCTCCCCTCTTGTGGATGTCCATCCAATCACACCTACACTTGACAAGCTGTGGGATGATCATGACAGATCAAAGAAGGACCATTTGCTTGCAGATAAGAAGCCTTCCTCACTTTTGTTTCCTTCTTCCAGTAGGAGATTCCCTTTTGCAGAGGATGGGGCCAGTGATCATCCAATATTTGACTGGAAGCCCAGCTCAAGTTCTAAACAGGATGACACCAAATCGTCGTTTGCACTACTAGAATCAACTCCTGCTCCATCTTCCAAGAGTGAAGACTCATCCATCACCCCTCCAGAAGCTTGGGGTGGTGAGAGATTATCCGATAAGTATACTCACCTGCGTCAGCCAATCACTTTTCCATCTCGCTTTGGGATGTCAGCTCAGACGTCAGGATCAATTTTATCTGGATTACCGGATATGTCCTTAACAGCAAGTCTTACTAGTATTAGCTCTTCTGCAAATTTAGGCTCAAGTTATCCGAACTTGCGCACGAAAGATGTGTCTTCCAATCAGGAGACTTCATTAGGATTTCCAGAACACATTTCCTCGAGTGCGATGCCTATGTCCCCTGGTAACAAAGGCATCATGGGGCACCTTGATTCACCAACATCTTTGGCCCTGCCTCGGAGATTCTCTACTTATGCAGAGAGGATAAGCACTACATCTTCCTACAATGACAGAACATCCCTTGCAGTTGGTTCACCAAAAACAAAGAAAACAGGAGCTGAAGGCAGAGAAGAACTGTTGAATAGCTTGTTGTCAAAGTCAGATTCATCAACTGCCACAGAATCAGGGATTCTTCCAGCAATGAATGGTGGAAGTTCGCATCTCCAAAATATGCCTCAACAAGATCCACAGCAGGGAAATTCCTTTACATTTCAGATTTTTCAACGTACTCTGGAAGAAACTCTTGATTCTTTTCAGAAATCCATACACGAAGATATGAGGAACCTTCATATAGAAATTTTAAGACAATTTCATATGCAAGAGATGGAAACATCAAATGTGATGAGTGCAATTCTGGAAAACCAAGCTGAGCTGATGAGAGAAGTTAAGTCTCTCCGGAAAGAAAACCAGCAGCTCCGGCAATTGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000242 GO:0000278 GO:0000281 GO:0000910 GO:0000911 GO:0000919 GO:0000922 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005813 GO:0005814 GO:0005815 GO:0005819 GO:0005828 GO:0005856 GO:0005874 GO:0005876 GO:0005929 GO:0007049 GO:0007275 GO:0007346 GO:0008104 GO:0008150 GO:0009553 GO:0009555 GO:0009987 GO:0010564 GO:0015630 GO:0016043 GO:0022402 GO:0022607 GO:0032465 GO:0032467 GO:0032501 GO:0032502 GO:0032506 GO:0032886 GO:0033036 GO:0033043 GO:0033365 GO:0034613 GO:0036064 GO:0042995 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044380 GO:0044422 GO:0044424 GO:0044430 GO:0044441 GO:0044444 GO:0044446 GO:0044450 GO:0044463 GO:0044464 GO:0045787 GO:0048229 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0051128 GO:0051179 GO:0051301 GO:0051302 GO:0051493 GO:0051641 GO:0051726 GO:0051781 GO:0060236 GO:0061640 GO:0065007 GO:0070507 GO:0070727 GO:0071539 GO:0071840 GO:0072698 GO:0090068 GO:0090224 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0120025 GO:0120038 GO:1902410 GO:1903047 GO:1905508 GO:2000694

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

800

Amino Acids

86.74

Weight (kDa)

6.4

Isoelectric Point (pI)

55.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008393)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05970 AT5G05970
fragaria_vesca	FvH4_7g23510 FvH4_7g23510 FvH4_7g23510
malus_domestica	MD01G1140700.v1.1 MD07G1205000.v1.1
prunus_persica	Prupe.2G241200_v2.0.a1 Prupe.2G241200_v2.0.a1
pyrus_communis	pycom01g16130 pycom07g19150
rosa_chinensis	RchiOBHm_Chr1g0368661 RchiOBHm_Chr4g0410231
rosa_laevigata	RLG00000027199
rosa_multiflora	Rmu_co8334599.1_g000001 Rmu_sc0001791.1_g000011
rosa_roxburghii	Rroxscaffold_4G00288380
rosa_rugosa	Rorug01G0343400
rosa_samantha	Rh1AG350800 Rh1BG314500 Rh1CG329200 Rh1DG346100
rosa_wichuraiana	Rw0G021660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1278
AarI	CACCTGC	2 cut(s)	584, 1647
AatII	GACGTC	1 cut(s)	1691
Acc16I	TGCGCA	1 cut(s)	1790
Acc36I	ACCTGC	2 cut(s)	584, 1647
AccB1I	GGYRCC	3 cut(s)	236, 796, 1893
AccB7I	CCANNNNNTGG	2 cut(s)	251, 680
AccBSI	CCGCTC	1 cut(s)	1007
AccI	GTMKAC	2 cut(s)	746, 1631
AccIII	TCCGGA	1 cut(s)	2364
AciI	CCGC	3 cut(s)	1005, 1052, 1136
AclWI	GGATC	5 cut(s)	17, 30, 92, 1702, 2147
AcoI	YGGCCR	1 cut(s)	1232
AcsI	RAATTY	4 cut(s)	10, 1762, 2167, 2265
AcuI	CTGAAG	3 cut(s)	286, 1131, 2049
AcyI	GRCGYC	1 cut(s)	1688
AfaI	GTAC	6 cut(s)	412, 431, 543, 837, 994, 2197
AfeI	AGCGCT	1 cut(s)	380
AfiI	CCNNNNNNNGG	7 cut(s)	128, 251, 680, 1220, 1315, 1926, 2162
AflII	CTTAAG	1 cut(s)	149
AgeI	ACCGGT	1 cut(s)	629
AgsI	TTSAA	8 cut(s)	658, 1028, 1035, 1125, 1179, 1285, 2050, 2192
AhdI	GACNNNNNGTC	1 cut(s)	760
AhlI	ACTAGT	1 cut(s)	1742
AjnI	CCWGG	4 cut(s)	127, 1114, 1234, 1870
AjuI	GAANNNNNNNTTGG	1 cut(s)	34
AleI	CACNNNNGTG	1 cut(s)	616
Alw21I	GWGCWC	1 cut(s)	450
Alw26I	GTCTC	7 cut(s)	85, 261, 995, 1133, 1202, 1811, 2364
AlwI	GGATC	5 cut(s)	17, 30, 92, 1702, 2147
AlwNI	CAGNNNCTG	3 cut(s)	935, 1160, 2027
Ama87I	CYCGRG	1 cut(s)	1849
Aor13HI	TCCGGA	1 cut(s)	2364
Aor51HI	AGCGCT	1 cut(s)	380
AoxI	GGCC	5 cut(s)	1117, 1222, 1232, 1461, 1917
ApeKI	GCWGC	5 cut(s)	44, 661, 842, 1157, 2380
ApoI	RAATTY	4 cut(s)	10, 1762, 2167, 2265
ArsI	GACNNNNNNTTYG	2 cut(s)	1787, 1819
AsiGI	ACCGGT	1 cut(s)	629
AspLEI	GCGC	3 cut(s)	381, 673, 1791
AspS9I	GGNCC	4 cut(s)	526, 1381, 1461, 1918
AsuC2I	CCSGG	1 cut(s)	565
AvaI	CYCGRG	1 cut(s)	1849
AvaII	GGWCC	2 cut(s)	526, 1381
BaeGI	GKGCMC	2 cut(s)	239, 1896
BaeI	ACNNNNGTAYC	2 cut(s)	313, 346
BalI	TGGCCA	1 cut(s)	1234
BamHI	GGATCC	1 cut(s)	22
BanI	GGYRCC	3 cut(s)	236, 796, 1893
BarI	GAAGNNNNNNTAC	4 cut(s)	1020, 1052, 1738, 1770
BbsI	GAAGAC	2 cut(s)	1581, 1797
Bbv12I	GWGCWC	1 cut(s)	450
BbvI	GCAGC	5 cut(s)	56, 673, 854, 1169, 2392
BceAI	ACGGC	1 cut(s)	1104
BcgI	CGANNNNNNTGC	4 cut(s)	1247, 1281, 1840, 1874
BciT130I	CCWGG	4 cut(s)	129, 1116, 1236, 1872
BclI	TGATCA	2 cut(s)	1360, 1468
BcnI	CCSGG	1 cut(s)	565
BcoDI	GTCTC	7 cut(s)	85, 261, 995, 1133, 1202, 1811, 2364
BcuI	ACTAGT	1 cut(s)	1742
BfaI	CTAG	8 cut(s)	180, 318, 408, 765, 1101, 1251, 1541, 1743
BfmI	CTRYAG	1 cut(s)	1200
BfoI	RGCGCY	1 cut(s)	382
BfrI	CTTAAG	1 cut(s)	149
BfuAI	ACCTGC	2 cut(s)	584, 1647
BisI	GCNGC	5 cut(s)	45, 662, 843, 1158, 2381
BlpI	GCTNAGC	1 cut(s)	2337
BlsI	GCNGC	5 cut(s)	46, 663, 844, 1159, 2382
Bme1390I	CCNGG	5 cut(s)	129, 565, 1116, 1236, 1872
Bme18I	GGWCC	2 cut(s)	526, 1381
BmeRI	GACNNNNNGTC	1 cut(s)	760
BmeT110I	CYCGRG	1 cut(s)	1849
BmgT120I	GGNCC	4 cut(s)	526, 1381, 1461, 1918
BmrFI	CCNGG	5 cut(s)	129, 565, 1116, 1236, 1872
BmsI	GCATC	4 cut(s)	1009, 1848, 1893, 2137
BpiI	GAAGAC	2 cut(s)	1581, 1797
BplI	GAGNNNNNCTC	4 cut(s)	103, 135, 1289, 1321
BpmI	CTGGAG	2 cut(s)	207, 1578
Bpu1102I	GCTNAGC	1 cut(s)	2337
BpuEI	CTTGAG	3 cut(s)	506, 1483, 1756
BpuMI	CCSGG	1 cut(s)	565
Bsa29I	ATCGAT	1 cut(s)	29
BsaBI	GATNNNNATC	1 cut(s)	1323
BsaHI	GRCGYC	1 cut(s)	1688
BsaI	GGTCTC	1 cut(s)	995
BsaJI	CCNNGG	3 cut(s)	883, 1870, 1925
BsaWI	WCCGGW	3 cut(s)	629, 1714, 2364
BsaXI	ACNNNNNCTCC	6 cut(s)	109, 139, 1008, 1038, 1540, 1570
Bsc4I	CCNNNNNNNGG	7 cut(s)	128, 251, 680, 1220, 1315, 1926, 2162
Bse118I	RCCGGY	1 cut(s)	629
Bse1I	ACTGG	5 cut(s)	45, 843, 1431, 1464, 1490
Bse3DI	GCAATG	2 cut(s)	432, 2115
Bse8I	GATNNNNATC	1 cut(s)	1323
BseAI	TCCGGA	1 cut(s)	2364
BseBI	CCWGG	4 cut(s)	129, 1116, 1236, 1872
BseCI	ATCGAT	1 cut(s)	29
BseDI	CCNNGG	3 cut(s)	883, 1870, 1925
BseJI	GATNNNNATC	1 cut(s)	1323
BseLI	CCNNNNNNNGG	7 cut(s)	128, 251, 680, 1220, 1315, 1926, 2162
BseMI	GCAATG	2 cut(s)	432, 2115
BseMII	CTCAG	4 cut(s)	310, 771, 1697, 2328
BseNI	ACTGG	5 cut(s)	45, 843, 1431, 1464, 1490
BseRI	GAGGAG	3 cut(s)	293, 1220, 1254
BseSI	GKGCMC	2 cut(s)	239, 1896
BseXI	GCAGC	5 cut(s)	56, 673, 854, 1169, 2392
BseYI	CCCAGC	2 cut(s)	831, 1493
BsgI	GTGCAG	1 cut(s)	594
Bsh1285I	CGRYCG	1 cut(s)	634
BshFI	GGCC	5 cut(s)	1119, 1224, 1234, 1463, 1919
BshNI	GGYRCC	3 cut(s)	236, 796, 1893
BshTI	ACCGGT	1 cut(s)	629
BshVI	ATCGAT	1 cut(s)	29
BsiEI	CGRYCG	1 cut(s)	634
BsiHKAI	GWGCWC	1 cut(s)	450
BsiHKCI	CYCGRG	1 cut(s)	1849
BsiSI	CCGG	6 cut(s)	93, 565, 630, 1715, 2365, 2386
BslFI	GGGAC	2 cut(s)	635, 1852
BslI	CCNNNNNNNGG	7 cut(s)	128, 251, 680, 1220, 1315, 1926, 2162
BsmAI	GTCTC	7 cut(s)	85, 261, 995, 1133, 1202, 1811, 2364
BsmFI	GGGAC	2 cut(s)	635, 1852
BsmI	GAATGC	1 cut(s)	664
BsnI	GGCC	5 cut(s)	1119, 1224, 1234, 1463, 1919
Bso31I	GGTCTC	1 cut(s)	995
BsoBI	CYCGRG	1 cut(s)	1849
Bsp1286I	GDGCHC	3 cut(s)	239, 450, 1896
Bsp13I	TCCGGA	1 cut(s)	2364
Bsp1407I	TGTACA	1 cut(s)	429
Bsp143I	GATC	8 cut(s)	22, 97, 1268, 1360, 1370, 1468, 1694, 2152
Bsp1720I	GCTNAGC	1 cut(s)	2337
BspACI	CCGC	3 cut(s)	1005, 1052, 1136
BspANI	GGCC	5 cut(s)	1119, 1224, 1234, 1463, 1919
BspCNI	CTCAG	4 cut(s)	309, 770, 1696, 2329
BspDI	ATCGAT	1 cut(s)	29
BspEI	TCCGGA	1 cut(s)	2364
BspHI	TCATGA	1 cut(s)	1363
BspMAI	CTGCAG	1 cut(s)	1204
BspMI	ACCTGC	2 cut(s)	584, 1647
BspPI	GGATC	5 cut(s)	17, 30, 92, 1702, 2147
BspQI	GCTCTTC	2 cut(s)	221, 1759
BspT107I	GGYRCC	3 cut(s)	236, 796, 1893
BspTI	CTTAAG	1 cut(s)	149
BspTNI	GGTCTC	1 cut(s)	995
BsrBI	CCGCTC	1 cut(s)	1007
BsrDI	GCAATG	2 cut(s)	432, 2115
BsrFI	RCCGGY	1 cut(s)	629
BsrGI	TGTACA	1 cut(s)	429
BsrI	ACTGG	5 cut(s)	45, 843, 1431, 1464, 1490
BssAI	RCCGGY	1 cut(s)	629
BssECI	CCNNGG	3 cut(s)	883, 1870, 1925
BssMI	GATC	8 cut(s)	22, 97, 1268, 1360, 1370, 1468, 1694, 2152
BssNAI	GTATAC	2 cut(s)	747, 1632
BssNI	GRCGYC	1 cut(s)	1688
Bst1107I	GTATAC	2 cut(s)	747, 1632
Bst2UI	CCWGG	4 cut(s)	129, 1116, 1236, 1872
Bst4CI	ACNGT	6 cut(s)	64, 263, 724, 907, 997, 2046
Bst6I	CTCTTC	3 cut(s)	221, 811, 1759
BstACI	GRCGYC	1 cut(s)	1688
BstAFI	CTTAAG	1 cut(s)	149
BstAPI	GCANNNNNTGC	1 cut(s)	512
BstAUI	TGTACA	1 cut(s)	429
BstC8I	GCNNGC	4 cut(s)	953, 1162, 1260, 1392
BstDEI	CTNAG	6 cut(s)	296, 451, 545, 757, 1683, 2337
BstDSI	CCRYGG	1 cut(s)	883
BstH2I	RGCGCY	1 cut(s)	382
BstHHI	GCGC	3 cut(s)	381, 673, 1791
BstKTI	GATC	8 cut(s)	25, 100, 1271, 1363, 1373, 1471, 1697, 2155
BstMAI	GTCTC	7 cut(s)	85, 261, 995, 1133, 1202, 1811, 2364
BstMBI	GATC	8 cut(s)	22, 97, 1268, 1360, 1370, 1468, 1694, 2152
BstMCI	CGRYCG	1 cut(s)	634
BstMWI	GCNNNNNNNGC	9 cut(s)	41, 102, 111, 376, 512, 670, 677, 1051, 2386
BstNI	CCWGG	4 cut(s)	129, 1116, 1236, 1872
BstNSI	RCATGY	1 cut(s)	1262
BstSCI	CCNGG	5 cut(s)	127, 563, 1114, 1234, 1870
BstSFI	CTRYAG	1 cut(s)	1200
BstSLI	GKGCMC	2 cut(s)	239, 1896
BstV1I	GCAGC	5 cut(s)	56, 673, 854, 1169, 2392
BstV2I	GAAGAC	2 cut(s)	1581, 1797
BstX2I	RGATCY	2 cut(s)	22, 2152
BstXI	CCANNNNNNTGG	3 cut(s)	172, 247, 1602
BstYI	RGATCY	2 cut(s)	22, 2152
BstZ17I	GTATAC	2 cut(s)	747, 1632
Bsu15I	ATCGAT	1 cut(s)	29
BsuRI	GGCC	5 cut(s)	1119, 1224, 1234, 1463, 1919
BsuTUI	ATCGAT	1 cut(s)	29
BtgI	CCRYGG	1 cut(s)	883
BtgZI	GCGATG	1 cut(s)	1871
BtsI	GCAGTG	2 cut(s)	862, 1171
BtsIMutI	CAGTG	5 cut(s)	60, 268, 862, 1171, 1471
BveI	ACCTGC	2 cut(s)	584, 1647
Cac8I	GCNNGC	4 cut(s)	953, 1162, 1260, 1392
CaiI	CAGNNNCTG	3 cut(s)	935, 1160, 2027
CciI	TCATGA	1 cut(s)	1363
CfoI	GCGC	3 cut(s)	381, 673, 1791
Cfr10I	RCCGGY	1 cut(s)	629
Cfr13I	GGNCC	4 cut(s)	526, 1381, 1461, 1918
ClaI	ATCGAT	1 cut(s)	29
CseI	GACGC	1 cut(s)	1631
Csp6I	GTAC	6 cut(s)	411, 430, 542, 836, 993, 2196
CspAI	ACCGGT	1 cut(s)	629
CviAII	CATG	6 cut(s)	137, 232, 1190, 1259, 1364, 1888
CviQI	GTAC	6 cut(s)	411, 430, 542, 836, 993, 2196
DdeI	CTNAG	6 cut(s)	296, 451, 545, 757, 1683, 2337
DpnI	GATC	8 cut(s)	24, 99, 1270, 1362, 1372, 1470, 1696, 2154
DpnII	GATC	8 cut(s)	22, 97, 1268, 1360, 1370, 1468, 1694, 2152
DriI	GACNNNNNGTC	1 cut(s)	760
EaeI	YGGCCR	1 cut(s)	1232
Eam1104I	CTCTTC	3 cut(s)	221, 811, 1759
Eam1105I	GACNNNNNGTC	1 cut(s)	760
EarI	CTCTTC	3 cut(s)	221, 811, 1759
Eco31I	GGTCTC	1 cut(s)	995
Eco32I	GATATC	1 cut(s)	204
Eco47I	GGWCC	2 cut(s)	526, 1381
Eco47III	AGCGCT	1 cut(s)	380
Eco57I	CTGAAG	3 cut(s)	286, 1131, 2049
Eco88I	CYCGRG	1 cut(s)	1849
EcoO109I	RGGNCCY	1 cut(s)	526
EcoRI	GAATTC	1 cut(s)	10
EcoRII	CCWGG	4 cut(s)	127, 1114, 1234, 1870
EcoRV	GATATC	1 cut(s)	204
FaeI	CATG	6 cut(s)	140, 235, 1193, 1262, 1367, 1891
FalI	AAGNNNNNCTT	4 cut(s)	191, 223, 2196, 2228
FaqI	GGGAC	2 cut(s)	635, 1852
FatI	CATG	6 cut(s)	136, 231, 1189, 1258, 1363, 1887
FauI	CCCGC	1 cut(s)	1059
FauNDI	CATATG	2 cut(s)	326, 2283
FbaI	TGATCA	2 cut(s)	1360, 1468
FblI	GTMKAC	2 cut(s)	746, 1631
Fnu4HI	GCNGC	5 cut(s)	45, 662, 843, 1158, 2381
Fsp4HI	GCNGC	5 cut(s)	45, 662, 843, 1158, 2381
FspBI	CTAG	8 cut(s)	180, 318, 408, 765, 1101, 1251, 1541, 1743
FspI	TGCGCA	1 cut(s)	1790
GlaI	GCGC	3 cut(s)	380, 672, 1790
GluI	GCNGC	5 cut(s)	45, 662, 843, 1158, 2381
GsaI	CCCAGC	2 cut(s)	835, 1497
GsuI	CTGGAG	2 cut(s)	207, 1578
HaeII	RGCGCY	1 cut(s)	382
HaeIII	GGCC	5 cut(s)	1119, 1224, 1234, 1463, 1919
HapII	CCGG	6 cut(s)	93, 565, 630, 1715, 2365, 2386
HgaI	GACGC	1 cut(s)	1631
HhaI	GCGC	3 cut(s)	381, 673, 1791
Hin1I	GRCGYC	1 cut(s)	1688
Hin1II	CATG	6 cut(s)	140, 235, 1193, 1262, 1367, 1891
Hin6I	GCGC	3 cut(s)	379, 671, 1789
HinP1I	GCGC	3 cut(s)	379, 671, 1789
HindIII	AAGCTT	1 cut(s)	1599
HpaII	CCGG	6 cut(s)	93, 565, 630, 1715, 2365, 2386
Hpy166II	GTNNAC	5 cut(s)	747, 890, 979, 1632, 2003
Hpy188I	TCNGA	8 cut(s)	931, 1624, 1686, 1782, 1929, 2071, 2184, 2226
Hpy8I	GTNNAC	5 cut(s)	747, 890, 979, 1632, 2003
Hpy99I	CGWCG	1 cut(s)	1531
HpyAV	CCTTC	8 cut(s)	132, 1068, 1088, 1372, 1416, 1434, 2024, 2264
HpyCH4III	ACNGT	6 cut(s)	64, 263, 724, 907, 997, 2046
HpyCH4IV	ACGT	2 cut(s)	1688, 2194
HpyF10VI	GCNNNNNNNGC	9 cut(s)	41, 102, 111, 376, 512, 670, 677, 1051, 2386
HpyF3I	CTNAG	6 cut(s)	296, 451, 545, 757, 1683, 2337
HpySE526I	ACGT	2 cut(s)	1688, 2194
Hsp92I	GRCGYC	1 cut(s)	1688
Hsp92II	CATG	6 cut(s)	140, 235, 1193, 1262, 1367, 1891
HspAI	GCGC	3 cut(s)	379, 671, 1789
Kpn2I	TCCGGA	1 cut(s)	2364
Ksp22I	TGATCA	2 cut(s)	1360, 1468
Kzo9I	GATC	8 cut(s)	22, 97, 1268, 1360, 1370, 1468, 1694, 2152
LguI	GCTCTTC	2 cut(s)	221, 1759
LmnI	GCTCC	5 cut(s)	137, 1267, 1561, 2024, 2388
Lsp1109I	GCAGC	5 cut(s)	56, 673, 854, 1169, 2392
LweI	GCATC	4 cut(s)	1009, 1848, 1893, 2137
MaeI	CTAG	8 cut(s)	180, 318, 408, 765, 1101, 1251, 1541, 1743
MaeII	ACGT	2 cut(s)	1688, 2194
MaeIII	GTNAC	8 cut(s)	36, 56, 305, 586, 937, 1063, 1150, 1874
MalI	GATC	8 cut(s)	24, 99, 1270, 1362, 1372, 1470, 1696, 2154
MbiI	CCGCTC	1 cut(s)	1007
MboI	GATC	8 cut(s)	22, 97, 1268, 1360, 1370, 1468, 1694, 2152
MfeI	CAATTG	3 cut(s)	433, 988, 2390
MflI	RGATCY	2 cut(s)	22, 2152
MhlI	GDGCHC	3 cut(s)	239, 450, 1896
MlsI	TGGCCA	1 cut(s)	1234
MluNI	TGGCCA	1 cut(s)	1234
MlyI	GAGTC	3 cut(s)	290, 749, 1571
Mox20I	TGGCCA	1 cut(s)	1234
MroI	TCCGGA	1 cut(s)	2364
MscI	TGGCCA	1 cut(s)	1234
MseI	TTAA	6 cut(s)	150, 387, 479, 1727, 2270, 2355
MslI	CAYNNNNRTG	2 cut(s)	245, 616
Msp20I	TGGCCA	1 cut(s)	1234
MspA1I	CMGCKG	2 cut(s)	845, 1160
MspCI	CTTAAG	1 cut(s)	149
MspI	CCGG	6 cut(s)	93, 565, 630, 1715, 2365, 2386
MspR9I	CCNGG	5 cut(s)	129, 565, 1116, 1236, 1872
MunI	CAATTG	3 cut(s)	433, 988, 2390
Mva1269I	GAATGC	1 cut(s)	664
MvaI	CCWGG	4 cut(s)	129, 1116, 1236, 1872
MwoI	GCNNNNNNNGC	9 cut(s)	41, 102, 111, 376, 512, 670, 677, 1051, 2386
NciI	CCSGG	1 cut(s)	565
NdeI	CATATG	2 cut(s)	326, 2283
NdeII	GATC	8 cut(s)	22, 97, 1268, 1360, 1370, 1468, 1694, 2152
NlaIII	CATG	6 cut(s)	140, 235, 1193, 1262, 1367, 1891
NmuCI	GTSAC	3 cut(s)	56, 586, 1063
NsbI	TGCGCA	1 cut(s)	1790
NspI	RCATGY	1 cut(s)	1262
OliI	CACNNNNGTG	1 cut(s)	616
PaeI	GCATGC	1 cut(s)	1262
PaeR7I	CTCGAG	1 cut(s)	1849
PagI	TCATGA	1 cut(s)	1363
PaqCI	CACCTGC	2 cut(s)	584, 1647
PciSI	GCTCTTC	2 cut(s)	221, 1759
PctI	GAATGC	1 cut(s)	664
PfeI	GAWTC	9 cut(s)	1031, 1440, 1544, 1901, 1932, 2072, 2090, 2098, 2216
PflFI	GACNNNGTC	1 cut(s)	62
PflMI	CCANNNNNTGG	2 cut(s)	251, 680
PfoI	TCCNGGA	1 cut(s)	563
PinAI	ACCGGT	1 cut(s)	629
PkrI	GCNGC	5 cut(s)	46, 663, 844, 1159, 2382
PleI	GAGTC	3 cut(s)	289, 749, 1571
PpsI	GAGTC	3 cut(s)	289, 749, 1571
PpuMI	RGGWCCY	1 cut(s)	526
PsiI	TTATAA	1 cut(s)	1278
Psp5II	RGGWCCY	1 cut(s)	526
Psp6I	CCWGG	4 cut(s)	127, 1114, 1234, 1870
PspFI	CCCAGC	2 cut(s)	831, 1493
PspGI	CCWGG	4 cut(s)	127, 1114, 1234, 1870
PspPI	GGNCC	4 cut(s)	526, 1381, 1461, 1918
PspPPI	RGGWCCY	1 cut(s)	526
PspXI	VCTCGAGB	1 cut(s)	1849
PstI	CTGCAG	1 cut(s)	1204
PstNI	CAGNNNCTG	3 cut(s)	935, 1160, 2027
PsuI	RGATCY	2 cut(s)	22, 2152
PsyI	GACNNNGTC	1 cut(s)	62
PvuII	CAGCTG	2 cut(s)	845, 1160
RsaI	GTAC	6 cut(s)	412, 431, 543, 837, 994, 2197
RsaNI	GTAC	6 cut(s)	411, 430, 542, 836, 993, 2196
RseI	CAYNNNNRTG	2 cut(s)	245, 616
SapI	GCTCTTC	2 cut(s)	221, 1759
SaqAI	TTAA	6 cut(s)	150, 387, 479, 1727, 2270, 2355
SatI	GCNGC	5 cut(s)	45, 662, 843, 1158, 2381
Sau3AI	GATC	8 cut(s)	22, 97, 1268, 1360, 1370, 1468, 1694, 2152
Sau96I	GGNCC	4 cut(s)	526, 1381, 1461, 1918
SchI	GAGTC	3 cut(s)	290, 749, 1571
ScrFI	CCNGG	5 cut(s)	129, 565, 1116, 1236, 1872
SduI	GDGCHC	3 cut(s)	239, 450, 1896
SfaNI	GCATC	4 cut(s)	1009, 1848, 1893, 2137
SfcI	CTRYAG	1 cut(s)	1200
Sfr274I	CTCGAG	1 cut(s)	1849
SinI	GGWCC	2 cut(s)	526, 1381
SlaI	CTCGAG	1 cut(s)	1849
SmiMI	CAYNNNNRTG	2 cut(s)	245, 616
SmlI	CTYRAG	5 cut(s)	149, 521, 1498, 1771, 1849
SmoI	CTYRAG	5 cut(s)	149, 521, 1498, 1771, 1849
SpeI	ACTAGT	1 cut(s)	1742
SphI	GCATGC	1 cut(s)	1262
SsiI	CCGC	3 cut(s)	1005, 1052, 1136
SspI	AATATT	1 cut(s)	1479
SspMI	CTAG	8 cut(s)	180, 318, 408, 765, 1101, 1251, 1541, 1743
StyD4I	CCNGG	5 cut(s)	127, 563, 1114, 1234, 1870
TaaI	ACNGT	6 cut(s)	64, 263, 724, 907, 997, 2046
TaiI	ACGT	2 cut(s)	1691, 2197
TaqI	TCGA	7 cut(s)	29, 468, 999, 1108, 1219, 1267, 1850
TaqII	GACCGA	1 cut(s)	73
TatI	WGTACW	3 cut(s)	410, 429, 992
TfiI	GAWTC	9 cut(s)	1031, 1440, 1544, 1901, 1932, 2072, 2090, 2098, 2216
Tru1I	TTAA	6 cut(s)	150, 387, 479, 1727, 2270, 2355
Tru9I	TTAA	6 cut(s)	150, 387, 479, 1727, 2270, 2355
TscAI	CASTG	5 cut(s)	67, 268, 862, 1171, 1471
TseFI	GTSAC	3 cut(s)	56, 586, 1063
TseI	GCWGC	5 cut(s)	44, 661, 842, 1157, 2380
Tsp45I	GTSAC	3 cut(s)	56, 586, 1063
TspGWI	ACGGA	1 cut(s)	872
TspRI	CASTG	5 cut(s)	67, 268, 862, 1171, 1471
Tth111I	GACNNNGTC	1 cut(s)	62
Van91I	CCANNNNNTGG	2 cut(s)	251, 680
Vha464I	CTTAAG	1 cut(s)	149
VpaK11BI	GGWCC	2 cut(s)	526, 1381
XapI	RAATTY	4 cut(s)	10, 1762, 2167, 2265
XbaI	TCTAGA	3 cut(s)	317, 764, 1250
XceI	RCATGY	1 cut(s)	1262
XcmI	CCANNNNNNNNNTGG	3 cut(s)	172, 648, 1482
XhoI	CTCGAG	1 cut(s)	1849
XmiI	GTMKAC	2 cut(s)	746, 1631
XspI	CTAG	8 cut(s)	180, 318, 408, 765, 1101, 1251, 1541, 1743
ZraI	GACGTC	1 cut(s)	1689

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.