WD40 repeats
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G05970 AT5G05970 |
| fragaria_vesca | FvH4_7g23510 FvH4_7g23510 FvH4_7g23510 |
| malus_domestica | MD01G1140700.v1.1 MD07G1205000.v1.1 |
| prunus_persica | Prupe.2G241200_v2.0.a1 Prupe.2G241200_v2.0.a1 |
| pyrus_communis | pycom01g16130 pycom07g19150 |
| rosa_chinensis | RchiOBHm_Chr1g0368661 RchiOBHm_Chr4g0410231 |
| rosa_laevigata | RLG00000027199 |
| rosa_multiflora | Rmu_co8334599.1_g000001 Rmu_sc0001791.1_g000011 |
| rosa_roxburghii | Rroxscaffold_4G00288380 |
| rosa_rugosa | Rorug01G0343400 |
| rosa_samantha | Rh1AG350800 Rh1BG314500 Rh1CG329200 Rh1DG346100 |
| rosa_wichuraiana | Rw0G021660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1411 |
| AatII | GACGTC | 1 cut(s) | 191 |
| Acc36I | ACCTGC | 1 cut(s) | 762 |
| AccI | GTMKAC | 1 cut(s) | 746 |
| AccII | CGCG | 1 cut(s) | 342 |
| AciI | CCGC | 3 cut(s) | 342, 723, 1477 |
| AclWI | GGATC | 2 cut(s) | 164, 817 |
| AcoI | YGGCCR | 2 cut(s) | 100, 353 |
| AcsI | RAATTY | 5 cut(s) | 115, 925, 1279, 1377, 1431 |
| AcuI | CTGAAG | 2 cut(s) | 743, 1072 |
| AcyI | GRCGYC | 1 cut(s) | 188 |
| AfaI | GTAC | 2 cut(s) | 1309, 1347 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 341, 436, 552, 1041 |
| AgsI | TTSAA | 6 cut(s) | 92, 149, 156, 406, 916, 1304 |
| AjnI | CCWGG | 4 cut(s) | 31, 235, 355, 976 |
| Alw26I | GTCTC | 3 cut(s) | 913, 1313, 1397 |
| AlwI | GGATC | 2 cut(s) | 164, 817 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 281, 1142 |
| AoxI | GGCC | 3 cut(s) | 100, 238, 353 |
| ApoI | RAATTY | 5 cut(s) | 115, 925, 1279, 1377, 1431 |
| AspS9I | GGNCC | 1 cut(s) | 1252 |
| AsuHPI | GGTGA | 4 cut(s) | 694, 737, 1008, 1110 |
| AvaII | GGWCC | 1 cut(s) | 1252 |
| AxyI | CCTNAGG | 1 cut(s) | 60 |
| BalI | TGGCCA | 2 cut(s) | 102, 355 |
| BauI | CACGAG | 1 cut(s) | 920 |
| BbsI | GAAGAC | 1 cut(s) | 696 |
| BccI | CCATC | 4 cut(s) | 45, 707, 784, 1047 |
| BceAI | ACGGC | 1 cut(s) | 225 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 368, 402 |
| BciT130I | CCWGG | 4 cut(s) | 33, 237, 357, 978 |
| BciVI | GTATCC | 1 cut(s) | 322 |
| BclI | TGATCA | 2 cut(s) | 481, 583 |
| BcoDI | GTCTC | 3 cut(s) | 913, 1313, 1397 |
| BfaI | CTAG | 6 cut(s) | 222, 609, 957, 1005, 1164, 1313 |
| BfmI | CTRYAG | 2 cut(s) | 321, 1244 |
| BfuAI | ACCTGC | 1 cut(s) | 762 |
| BfuI | GTATCC | 1 cut(s) | 322 |
| BlpI | GCTNAGC | 2 cut(s) | 613, 1449 |
| Bme1390I | CCNGG | 4 cut(s) | 33, 237, 357, 978 |
| Bme18I | GGWCC | 1 cut(s) | 1252 |
| BmgT120I | GGNCC | 1 cut(s) | 1252 |
| BmiI | GGNNCC | 5 cut(s) | 57, 557, 1234, 1254, 1364 |
| BmrFI | CCNGG | 4 cut(s) | 33, 237, 357, 978 |
| BmsI | GCATC | 3 cut(s) | 35, 130, 1255 |
| BpiI | GAAGAC | 1 cut(s) | 696 |
| BpmI | CTGGAG | 2 cut(s) | 156, 693 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 613, 1449 |
| BsaBI | GATNNNNATC | 2 cut(s) | 444, 658 |
| BsaHI | GRCGYC | 1 cut(s) | 188 |
| BsaJI | CCNNGG | 3 cut(s) | 103, 930, 976 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 129, 159, 655, 685 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 341, 436, 552, 1041 |
| Bse1I | ACTGG | 2 cut(s) | 286, 546 |
| Bse21I | CCTNAGG | 1 cut(s) | 60 |
| Bse3DI | GCAATG | 1 cut(s) | 1227 |
| Bse8I | GATNNNNATC | 2 cut(s) | 444, 658 |
| BseBI | CCWGG | 4 cut(s) | 33, 237, 357, 978 |
| BseDI | CCNNGG | 3 cut(s) | 103, 930, 976 |
| BseJI | GATNNNNATC | 2 cut(s) | 444, 658 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 341, 436, 552, 1041 |
| BseMI | GCAATG | 1 cut(s) | 1227 |
| BseMII | CTCAG | 4 cut(s) | 51, 627, 812, 1440 |
| BseNI | ACTGG | 2 cut(s) | 286, 546 |
| BseRI | GAGGAG | 2 cut(s) | 77, 375 |
| Bsh1236I | CGCG | 1 cut(s) | 342 |
| BshFI | GGCC | 3 cut(s) | 102, 240, 355 |
| BsiSI | CCGG | 1 cut(s) | 1498 |
| BslFI | GGGAC | 3 cut(s) | 958, 1011, 1238 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 341, 436, 552, 1041 |
| BsmAI | GTCTC | 3 cut(s) | 913, 1313, 1397 |
| BsmBI | CGTCTC | 1 cut(s) | 1397 |
| BsmFI | GGGAC | 3 cut(s) | 958, 1011, 1238 |
| BsnI | GGCC | 3 cut(s) | 102, 240, 355 |
| Bsp143I | GATC | 6 cut(s) | 169, 389, 481, 491, 583, 809 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 613, 1449 |
| Bsp19I | CCATGG | 1 cut(s) | 103 |
| BspACI | CCGC | 3 cut(s) | 342, 723, 1477 |
| BspANI | GGCC | 3 cut(s) | 102, 240, 355 |
| BspCNI | CTCAG | 4 cut(s) | 52, 626, 811, 1441 |
| BspFNI | CGCG | 1 cut(s) | 342 |
| BspHI | TCATGA | 1 cut(s) | 484 |
| BspLI | GGNNCC | 5 cut(s) | 57, 557, 1234, 1254, 1364 |
| BspMAI | CTGCAG | 2 cut(s) | 325, 1248 |
| BspMI | ACCTGC | 1 cut(s) | 762 |
| BspPI | GGATC | 2 cut(s) | 164, 817 |
| BsrDI | GCAATG | 1 cut(s) | 1227 |
| BsrI | ACTGG | 2 cut(s) | 286, 546 |
| BssECI | CCNNGG | 3 cut(s) | 103, 930, 976 |
| BssMI | GATC | 6 cut(s) | 169, 389, 481, 491, 583, 809 |
| BssNAI | GTATAC | 1 cut(s) | 747 |
| BssNI | GRCGYC | 1 cut(s) | 188 |
| BssSI | CACGAG | 1 cut(s) | 920 |
| BssT1I | CCWWGG | 2 cut(s) | 103, 930 |
| Bst1107I | GTATAC | 1 cut(s) | 747 |
| Bst2BI | CACGAG | 1 cut(s) | 920 |
| Bst2UI | CCWGG | 4 cut(s) | 33, 237, 357, 978 |
| Bst4CI | ACNGT | 3 cut(s) | 22, 1002, 1420 |
| Bst6I | CTCTTC | 1 cut(s) | 1311 |
| BstACI | GRCGYC | 1 cut(s) | 188 |
| BstC8I | GCNNGC | 2 cut(s) | 344, 381 |
| BstDEI | CTNAG | 4 cut(s) | 60, 613, 798, 1449 |
| BstDSI | CCRYGG | 1 cut(s) | 103 |
| BstFNI | CGCG | 1 cut(s) | 342 |
| BstKTI | GATC | 6 cut(s) | 172, 392, 484, 494, 586, 812 |
| BstMAI | GTCTC | 3 cut(s) | 913, 1313, 1397 |
| BstMBI | GATC | 6 cut(s) | 169, 389, 481, 491, 583, 809 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 108, 140, 352, 873, 1445, 1498 |
| BstNI | CCWGG | 4 cut(s) | 33, 237, 357, 978 |
| BstNSI | RCATGY | 2 cut(s) | 383, 1399 |
| BstSCI | CCNGG | 4 cut(s) | 31, 235, 355, 976 |
| BstSFI | CTRYAG | 2 cut(s) | 321, 1244 |
| BstUI | CGCG | 1 cut(s) | 342 |
| BstV2I | GAAGAC | 1 cut(s) | 696 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 134, 717 |
| BstZ17I | GTATAC | 1 cut(s) | 747 |
| Bsu36I | CCTNAGG | 1 cut(s) | 60 |
| BsuI | GTATCC | 1 cut(s) | 322 |
| BsuRI | GGCC | 3 cut(s) | 102, 240, 355 |
| BtgI | CCRYGG | 1 cut(s) | 103 |
| BtgZI | GCGATG | 1 cut(s) | 323 |
| BtsI | GCAGTG | 2 cut(s) | 292, 1116 |
| BtsIMutI | CAGTG | 3 cut(s) | 292, 1096, 1116 |
| BveI | ACCTGC | 1 cut(s) | 762 |
| Cac8I | GCNNGC | 2 cut(s) | 344, 381 |
| CaiI | CAGNNNCTG | 2 cut(s) | 281, 1142 |
| CciI | TCATGA | 1 cut(s) | 484 |
| Cfr13I | GGNCC | 1 cut(s) | 1252 |
| CseI | GACGC | 1 cut(s) | 285 |
| Csp6I | GTAC | 2 cut(s) | 1308, 1346 |
| CviAII | CATG | 8 cut(s) | 98, 104, 380, 485, 964, 994, 1349, 1396 |
| CviQI | GTAC | 2 cut(s) | 1308, 1346 |
| DdeI | CTNAG | 4 cut(s) | 60, 613, 798, 1449 |
| DpnI | GATC | 6 cut(s) | 171, 391, 483, 493, 585, 811 |
| DpnII | GATC | 6 cut(s) | 169, 389, 481, 491, 583, 809 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1411 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1411 |
| EaeI | YGGCCR | 2 cut(s) | 100, 353 |
| Eam1104I | CTCTTC | 1 cut(s) | 1311 |
| EarI | CTCTTC | 1 cut(s) | 1311 |
| Eco130I | CCWWGG | 2 cut(s) | 103, 930 |
| Eco47I | GGWCC | 1 cut(s) | 1252 |
| Eco57I | CTGAAG | 2 cut(s) | 743, 1072 |
| Eco81I | CCTNAGG | 1 cut(s) | 60 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1252 |
| EcoRI | GAATTC | 2 cut(s) | 115, 925 |
| EcoRII | CCWGG | 4 cut(s) | 31, 235, 355, 976 |
| EcoT14I | CCWWGG | 2 cut(s) | 103, 930 |
| ErhI | CCWWGG | 2 cut(s) | 103, 930 |
| Esp3I | CGTCTC | 1 cut(s) | 1397 |
| FaeI | CATG | 8 cut(s) | 101, 107, 383, 488, 967, 997, 1352, 1399 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 62, 94, 1308, 1340 |
| FaqI | GGGAC | 3 cut(s) | 958, 1011, 1238 |
| FatI | CATG | 8 cut(s) | 97, 103, 379, 484, 963, 993, 1348, 1395 |
| FauI | CCCGC | 1 cut(s) | 335 |
| FbaI | TGATCA | 2 cut(s) | 481, 583 |
| FblI | GTMKAC | 1 cut(s) | 746 |
| FspBI | CTAG | 6 cut(s) | 222, 609, 957, 1005, 1164, 1313 |
| GsuI | CTGGAG | 2 cut(s) | 156, 693 |
| HaeIII | GGCC | 3 cut(s) | 102, 240, 355 |
| HapII | CCGG | 1 cut(s) | 1498 |
| HgaI | GACGC | 1 cut(s) | 285 |
| Hin1I | GRCGYC | 1 cut(s) | 188 |
| Hin1II | CATG | 8 cut(s) | 101, 107, 383, 488, 967, 997, 1352, 1399 |
| HincII | GTYRAC | 3 cut(s) | 300, 1161, 1416 |
| HindII | GTYRAC | 3 cut(s) | 300, 1161, 1416 |
| HindIII | AAGCTT | 2 cut(s) | 714, 874 |
| HpaI | GTTAAC | 1 cut(s) | 1161 |
| HpaII | CCGG | 1 cut(s) | 1498 |
| HphI | GGTGA | 4 cut(s) | 694, 737, 1008, 1110 |
| Hpy166II | GTNNAC | 5 cut(s) | 300, 747, 1118, 1161, 1416 |
| Hpy188I | TCNGA | 8 cut(s) | 231, 739, 801, 855, 1044, 1183, 1296, 1338 |
| Hpy8I | GTNNAC | 5 cut(s) | 300, 747, 1118, 1161, 1416 |
| HpyAV | CCTTC | 6 cut(s) | 189, 493, 531, 1096, 1243, 1376 |
| HpyCH4III | ACNGT | 3 cut(s) | 22, 1002, 1420 |
| HpyCH4IV | ACGT | 2 cut(s) | 188, 1306 |
| HpyCH4V | TGCA | 7 cut(s) | 26, 323, 379, 1061, 1246, 1268, 1399 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 108, 140, 352, 873, 1445, 1498 |
| HpyF3I | CTNAG | 4 cut(s) | 60, 613, 798, 1449 |
| HpySE526I | ACGT | 2 cut(s) | 188, 1306 |
| Hsp92I | GRCGYC | 1 cut(s) | 188 |
| Hsp92II | CATG | 8 cut(s) | 101, 107, 383, 488, 967, 997, 1352, 1399 |
| Ksp22I | TGATCA | 2 cut(s) | 481, 583 |
| KspAI | GTTAAC | 1 cut(s) | 1161 |
| Kzo9I | GATC | 6 cut(s) | 169, 389, 481, 491, 583, 809 |
| LmnI | GCTCC | 3 cut(s) | 388, 676, 1139 |
| LweI | GCATC | 3 cut(s) | 35, 130, 1255 |
| MaeI | CTAG | 6 cut(s) | 222, 609, 957, 1005, 1164, 1313 |
| MaeII | ACGT | 2 cut(s) | 188, 1306 |
| MaeIII | GTNAC | 3 cut(s) | 184, 271, 1091 |
| MalI | GATC | 6 cut(s) | 171, 391, 483, 493, 585, 811 |
| MboI | GATC | 6 cut(s) | 169, 389, 481, 491, 583, 809 |
| MboII | GAAGA | 8 cut(s) | 161, 633, 701, 1074, 1205, 1328, 1364, 1472 |
| MfeI | CAATTG | 1 cut(s) | 1502 |
| MlsI | TGGCCA | 2 cut(s) | 102, 355 |
| MluCI | AATT | 8 cut(s) | 115, 925, 1154, 1279, 1377, 1388, 1431, 1502 |
| MluNI | TGGCCA | 2 cut(s) | 102, 355 |
| MlyI | GAGTC | 2 cut(s) | 686, 1315 |
| Mox20I | TGGCCA | 2 cut(s) | 102, 355 |
| MscI | TGGCCA | 2 cut(s) | 102, 355 |
| MseI | TTAA | 8 cut(s) | 309, 399, 878, 900, 951, 1160, 1382, 1467 |
| MslI | CAYNNNNRTG | 2 cut(s) | 102, 968 |
| Msp20I | TGGCCA | 2 cut(s) | 102, 355 |
| MspI | CCGG | 1 cut(s) | 1498 |
| MspR9I | CCNGG | 4 cut(s) | 33, 237, 357, 978 |
| MunI | CAATTG | 1 cut(s) | 1502 |
| MvaI | CCWGG | 4 cut(s) | 33, 237, 357, 978 |
| MvnI | CGCG | 1 cut(s) | 342 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 108, 140, 352, 873, 1445, 1498 |
| NcoI | CCATGG | 1 cut(s) | 103 |
| NdeII | GATC | 6 cut(s) | 169, 389, 481, 491, 583, 809 |
| NlaIII | CATG | 8 cut(s) | 101, 107, 383, 488, 967, 997, 1352, 1399 |
| NlaIV | GGNNCC | 5 cut(s) | 57, 557, 1234, 1254, 1364 |
| NmuCI | GTSAC | 2 cut(s) | 184, 1091 |
| NspI | RCATGY | 2 cut(s) | 383, 1399 |
| PaeI | GCATGC | 1 cut(s) | 383 |
| PagI | TCATGA | 1 cut(s) | 484 |
| PfeI | GAWTC | 9 cut(s) | 152, 232, 659, 990, 1013, 1047, 1202, 1210, 1328 |
| PfoI | TCCNGGA | 1 cut(s) | 31 |
| PleI | GAGTC | 2 cut(s) | 686, 1315 |
| PpsI | GAGTC | 2 cut(s) | 686, 1315 |
| PpuMI | RGGWCCY | 1 cut(s) | 1252 |
| Psp5II | RGGWCCY | 1 cut(s) | 1252 |
| Psp6I | CCWGG | 4 cut(s) | 31, 235, 355, 976 |
| PspGI | CCWGG | 4 cut(s) | 31, 235, 355, 976 |
| PspN4I | GGNNCC | 5 cut(s) | 57, 557, 1234, 1254, 1364 |
| PspPI | GGNCC | 1 cut(s) | 1252 |
| PspPPI | RGGWCCY | 1 cut(s) | 1252 |
| PstI | CTGCAG | 2 cut(s) | 325, 1248 |
| PstNI | CAGNNNCTG | 2 cut(s) | 281, 1142 |
| RsaI | GTAC | 2 cut(s) | 1309, 1347 |
| RsaNI | GTAC | 2 cut(s) | 1308, 1346 |
| RseI | CAYNNNNRTG | 2 cut(s) | 102, 968 |
| SaqAI | TTAA | 8 cut(s) | 309, 399, 878, 900, 951, 1160, 1382, 1467 |
| Sau3AI | GATC | 6 cut(s) | 169, 389, 481, 491, 583, 809 |
| Sau96I | GGNCC | 1 cut(s) | 1252 |
| SchI | GAGTC | 2 cut(s) | 686, 1315 |
| ScrFI | CCNGG | 4 cut(s) | 33, 237, 357, 978 |
| SfaNI | GCATC | 3 cut(s) | 35, 130, 1255 |
| SfcI | CTRYAG | 2 cut(s) | 321, 1244 |
| SinI | GGWCC | 1 cut(s) | 1252 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 102, 968 |
| SphI | GCATGC | 1 cut(s) | 383 |
| Sse9I | AATT | 8 cut(s) | 115, 925, 1154, 1279, 1377, 1388, 1431, 1502 |
| SsiI | CCGC | 3 cut(s) | 342, 723, 1477 |
| SspI | AATATT | 1 cut(s) | 594 |
| SspMI | CTAG | 6 cut(s) | 222, 609, 957, 1005, 1164, 1313 |
| StyD4I | CCNGG | 4 cut(s) | 31, 235, 355, 976 |
| StyI | CCWWGG | 2 cut(s) | 103, 930 |
| TaaI | ACNGT | 3 cut(s) | 22, 1002, 1420 |
| TaiI | ACGT | 2 cut(s) | 191, 1309 |
| TaqI | TCGA | 3 cut(s) | 49, 388, 652 |
| TaqII | GACCGA | 1 cut(s) | 1110 |
| TasI | AATT | 8 cut(s) | 115, 925, 1154, 1279, 1377, 1388, 1431, 1502 |
| TatI | WGTACW | 1 cut(s) | 1345 |
| TfiI | GAWTC | 9 cut(s) | 152, 232, 659, 990, 1013, 1047, 1202, 1210, 1328 |
| Tru1I | TTAA | 8 cut(s) | 309, 399, 878, 900, 951, 1160, 1382, 1467 |
| Tru9I | TTAA | 8 cut(s) | 309, 399, 878, 900, 951, 1160, 1382, 1467 |
| TscAI | CASTG | 3 cut(s) | 292, 1096, 1116 |
| TseFI | GTSAC | 2 cut(s) | 184, 1091 |
| Tsp45I | GTSAC | 2 cut(s) | 184, 1091 |
| TspDTI | ATGAA | 6 cut(s) | 434, 513, 633, 1238, 1358, 1365 |
| TspGWI | ACGGA | 3 cut(s) | 663, 1242, 1421 |
| TspRI | CASTG | 3 cut(s) | 292, 1096, 1116 |
| VpaK11BI | GGWCC | 1 cut(s) | 1252 |
| XapI | RAATTY | 5 cut(s) | 115, 925, 1279, 1377, 1431 |
| XbaI | TCTAGA | 1 cut(s) | 1312 |
| XceI | RCATGY | 2 cut(s) | 383, 1399 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 597 |
| XmiI | GTMKAC | 1 cut(s) | 746 |
| XspI | CTAG | 6 cut(s) | 222, 609, 957, 1005, 1164, 1313 |
| ZraI | GACGTC | 1 cut(s) | 189 |