WD40 repeats
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G05970 AT5G05970 |
| fragaria_vesca | FvH4_7g23510 FvH4_7g23510 FvH4_7g23510 |
| malus_domestica | MD01G1140700.v1.1 MD07G1205000.v1.1 |
| prunus_persica | Prupe.2G241200_v2.0.a1 Prupe.2G241200_v2.0.a1 |
| pyrus_communis | pycom01g16130 pycom07g19150 |
| rosa_chinensis | RchiOBHm_Chr1g0368661 RchiOBHm_Chr4g0410231 |
| rosa_laevigata | RLG00000027199 |
| rosa_multiflora | Rmu_co8334599.1_g000001 Rmu_sc0001791.1_g000011 |
| rosa_roxburghii | Rroxscaffold_4G00288380 |
| rosa_rugosa | Rorug01G0343400 |
| rosa_samantha | Rh1AG350800 Rh1BG314500 Rh1CG329200 Rh1DG346100 |
| rosa_wichuraiana | Rw0G021660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 348 |
| AccI | GTMKAC | 1 cut(s) | 332 |
| AciI | CCGC | 1 cut(s) | 309 |
| AclWI | GGATC | 1 cut(s) | 403 |
| AcuI | CTGAAG | 1 cut(s) | 329 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 22 |
| AflIII | ACRYGT | 1 cut(s) | 159 |
| AjiI | CACGTC | 1 cut(s) | 160 |
| AluBI | AGCT | 5 cut(s) | 58, 198, 203, 302, 383 |
| AluI | AGCT | 5 cut(s) | 58, 198, 203, 302, 383 |
| AlwI | GGATC | 1 cut(s) | 403 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 249 |
| AsuHPI | GGTGA | 2 cut(s) | 280, 323 |
| BbsI | GAAGAC | 1 cut(s) | 282 |
| BccI | CCATC | 3 cut(s) | 20, 293, 370 |
| BceAI | ACGGC | 1 cut(s) | 235 |
| BclI | TGATCA | 2 cut(s) | 67, 169 |
| BfaI | CTAG | 2 cut(s) | 132, 195 |
| BfuAI | ACCTGC | 1 cut(s) | 348 |
| BlpI | GCTNAGC | 1 cut(s) | 199 |
| BmgBI | CACGTC | 1 cut(s) | 160 |
| BmiI | GGNNCC | 1 cut(s) | 143 |
| BpiI | GAAGAC | 1 cut(s) | 282 |
| BpmI | CTGGAG | 1 cut(s) | 279 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 199 |
| BsaBI | GATNNNNATC | 1 cut(s) | 30 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 22 |
| Bse8I | GATNNNNATC | 1 cut(s) | 30 |
| BseGI | GGATG | 7 cut(s) | 31, 31, 70, 172, 220, 281, 381 |
| BseJI | GATNNNNATC | 1 cut(s) | 30 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 22 |
| BseMII | CTCAG | 2 cut(s) | 213, 398 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 22 |
| Bsp143I | GATC | 4 cut(s) | 67, 77, 169, 395 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 199 |
| BspACI | CCGC | 1 cut(s) | 309 |
| BspCNI | CTCAG | 2 cut(s) | 212, 397 |
| BspHI | TCATGA | 1 cut(s) | 70 |
| BspLI | GGNNCC | 1 cut(s) | 143 |
| BspMI | ACCTGC | 1 cut(s) | 348 |
| BspPI | GGATC | 1 cut(s) | 403 |
| BssMI | GATC | 4 cut(s) | 67, 77, 169, 395 |
| BssNAI | GTATAC | 1 cut(s) | 333 |
| Bst1107I | GTATAC | 1 cut(s) | 333 |
| BstDEI | CTNAG | 2 cut(s) | 199, 384 |
| BstF5I | GGATG | 7 cut(s) | 31, 31, 70, 172, 220, 281, 381 |
| BstKTI | GATC | 4 cut(s) | 70, 80, 172, 398 |
| BstMBI | GATC | 4 cut(s) | 67, 77, 169, 395 |
| BstV2I | GAAGAC | 1 cut(s) | 282 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 303 |
| BstZ17I | GTATAC | 1 cut(s) | 333 |
| BtrI | CACGTC | 1 cut(s) | 160 |
| BtsCI | GGATG | 7 cut(s) | 31, 31, 70, 172, 220, 281, 381 |
| BveI | ACCTGC | 1 cut(s) | 348 |
| CciI | TCATGA | 1 cut(s) | 70 |
| CviAII | CATG | 1 cut(s) | 71 |
| CviJI | RGCY | 8 cut(s) | 58, 106, 193, 198, 203, 302, 349, 383 |
| CviKI_1 | RGCY | 8 cut(s) | 58, 106, 193, 198, 203, 302, 349, 383 |
| DdeI | CTNAG | 2 cut(s) | 199, 384 |
| DpnI | GATC | 4 cut(s) | 69, 79, 171, 397 |
| DpnII | GATC | 4 cut(s) | 67, 77, 169, 395 |
| Eco57I | CTGAAG | 1 cut(s) | 329 |
| FaeI | CATG | 1 cut(s) | 74 |
| FaiI | YATR | 5 cut(s) | 72, 262, 333, 359, 405 |
| FatI | CATG | 1 cut(s) | 70 |
| FbaI | TGATCA | 2 cut(s) | 67, 169 |
| FblI | GTMKAC | 1 cut(s) | 332 |
| FokI | GGATG | 7 cut(s) | 18, 38, 77, 159, 227, 268, 388 |
| FspBI | CTAG | 2 cut(s) | 132, 195 |
| GsuI | CTGGAG | 1 cut(s) | 279 |
| Hin1II | CATG | 1 cut(s) | 74 |
| HincII | GTYRAC | 1 cut(s) | 433 |
| HindII | GTYRAC | 1 cut(s) | 433 |
| HindIII | AAGCTT | 1 cut(s) | 300 |
| HinfI | GANTC | 2 cut(s) | 245, 278 |
| HphI | GGTGA | 2 cut(s) | 280, 323 |
| Hpy166II | GTNNAC | 2 cut(s) | 333, 433 |
| Hpy188I | TCNGA | 3 cut(s) | 325, 387, 442 |
| Hpy188III | TCNNGA | 4 cut(s) | 71, 296, 393, 409 |
| Hpy8I | GTNNAC | 2 cut(s) | 333, 433 |
| HpyAV | CCTTC | 1 cut(s) | 117 |
| HpyCH4IV | ACGT | 1 cut(s) | 159 |
| HpyF3I | CTNAG | 2 cut(s) | 199, 384 |
| HpySE526I | ACGT | 1 cut(s) | 159 |
| Hsp92II | CATG | 1 cut(s) | 74 |
| Ksp22I | TGATCA | 2 cut(s) | 67, 169 |
| Kzo9I | GATC | 4 cut(s) | 67, 77, 169, 395 |
| LmnI | GCTCC | 1 cut(s) | 262 |
| LpnPI | CCDG | 8 cut(s) | 46, 197, 267, 309, 353, 378, 394, 430 |
| MaeI | CTAG | 2 cut(s) | 132, 195 |
| MaeII | ACGT | 1 cut(s) | 159 |
| MalI | GATC | 4 cut(s) | 69, 79, 171, 397 |
| MboI | GATC | 4 cut(s) | 67, 77, 169, 395 |
| MboII | GAAGA | 2 cut(s) | 219, 287 |
| MluCI | AATT | 2 cut(s) | 249, 400 |
| MlyI | GAGTC | 1 cut(s) | 272 |
| MnlI | CCTC | 5 cut(s) | 27, 132, 136, 148, 303 |
| MroXI | GAANNNNTTC | 1 cut(s) | 249 |
| NdeII | GATC | 4 cut(s) | 67, 77, 169, 395 |
| NlaIII | CATG | 1 cut(s) | 74 |
| NlaIV | GGNNCC | 1 cut(s) | 143 |
| PagI | TCATGA | 1 cut(s) | 70 |
| PdmI | GAANNNNTTC | 1 cut(s) | 249 |
| PfeI | GAWTC | 1 cut(s) | 245 |
| PleI | GAGTC | 1 cut(s) | 272 |
| PpsI | GAGTC | 1 cut(s) | 272 |
| PspN4I | GGNNCC | 1 cut(s) | 143 |
| Sau3AI | GATC | 4 cut(s) | 67, 77, 169, 395 |
| SchI | GAGTC | 1 cut(s) | 272 |
| Sse9I | AATT | 2 cut(s) | 249, 400 |
| SsiI | CCGC | 1 cut(s) | 309 |
| SspI | AATATT | 1 cut(s) | 180 |
| SspMI | CTAG | 2 cut(s) | 132, 195 |
| TaiI | ACGT | 1 cut(s) | 162 |
| TasI | AATT | 2 cut(s) | 249, 400 |
| TfiI | GAWTC | 1 cut(s) | 245 |
| TspDTI | ATGAA | 1 cut(s) | 99 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 183 |
| XmiI | GTMKAC | 1 cut(s) | 332 |
| XmnI | GAANNNNTTC | 1 cut(s) | 249 |
| XspI | CTAG | 2 cut(s) | 132, 195 |